View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12913_low_35 (Length: 313)
Name: NF12913_low_35
Description: NF12913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12913_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 38566153 - 38566450
Alignment:
| Q |
1 |
tttgtatttgtgatgaataatgatgtcaatggtaaagttgtttgatggttgatgaccgttacagtgtggcgcgctattaatgtcgagctcatacccatta |
100 |
Q |
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| T |
38566153 |
tttgtatttatgatgaataatgatgtcaactgtaaagtcgtttgatggttgatgaccgttacagtgtggcgcgctattaatgtcgagctcaaacccatta |
38566252 |
T |
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| Q |
101 |
ggtgtcatcaaggtgttttagaacggaggattttttactaatcttttgagaaattggtgagaaagaaagtttaaagttacttg------tttggtcgaat |
194 |
Q |
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| T |
38566253 |
gatgt-----------tttagaatggaggattttttactaatcttttgagaaattggtgagatagaaagtttaaagttactggacttgatttggtcgaat |
38566341 |
T |
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| Q |
195 |
ggacatattcagggcagagtgttattggactttatattcatgcaatttaaagttaagattctctccaattttttcatcaccaatattttaaatttataaa |
294 |
Q |
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||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38566342 |
ggacatattcagggcagagtgttgttgaactttatattcatgcaatttaaagttaagattctctccaattttttcatcaccaatattttaaatttataaa |
38566441 |
T |
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