View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12915_high_8 (Length: 415)

Name: NF12915_high_8
Description: NF12915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12915_high_8
NF12915_high_8
[»] chr8 (78 HSPs)
chr8 (124-381)||(29165365-29165619)
chr8 (2-99)||(5742543-5742640)
chr8 (1-93)||(28156290-28156382)
chr8 (6-100)||(45405720-45405814)
chr8 (1-100)||(32674117-32674216)
chr8 (4-93)||(38939084-38939172)
chr8 (7-91)||(42651013-42651097)
chr8 (2-91)||(1422596-1422685)
chr8 (2-75)||(14233554-14233627)
chr8 (3-101)||(41776264-41776362)
chr8 (1-98)||(25430733-25430830)
chr8 (3-92)||(33635664-33635753)
chr8 (1-98)||(34838157-34838254)
chr8 (3-75)||(8233406-8233478)
chr8 (3-74)||(6243123-6243194)
chr8 (1-91)||(18550066-18550156)
chr8 (1-99)||(22203101-22203199)
chr8 (1-91)||(34247861-34247951)
chr8 (1-101)||(12045538-12045637)
chr8 (1-101)||(22836023-22836123)
chr8 (3-91)||(37471732-37471820)
chr8 (16-91)||(34578231-34578306)
chr8 (1-67)||(2597078-2597144)
chr8 (1-67)||(22767217-22767283)
chr8 (2-75)||(3394612-3394685)
chr8 (3-100)||(28713182-28713279)
chr8 (3-100)||(28720529-28720626)
chr8 (3-100)||(28728171-28728268)
chr8 (2-67)||(30927849-30927914)
chr8 (3-56)||(32185595-32185648)
chr8 (1-105)||(23258119-23258222)
chr8 (1-93)||(27300433-27300525)
chr8 (1-105)||(29910093-29910196)
chr8 (7-91)||(34883257-34883341)
chr8 (1-104)||(1065504-1065607)
chr8 (1-56)||(7129620-7129675)
chr8 (1-98)||(24946089-24946182)
chr8 (1-99)||(30925541-30925638)
chr8 (3-62)||(43590783-43590842)
chr8 (1-67)||(426188-426254)
chr8 (1-67)||(13884403-13884469)
chr8 (1-67)||(19723124-19723190)
chr8 (1-91)||(33692808-33692898)
chr8 (1-55)||(41273602-41273656)
chr8 (3-101)||(42443195-42443292)
chr8 (1-42)||(5502447-5502488)
chr8 (1-98)||(6005031-6005127)
chr8 (2-67)||(11138984-11139049)
chr8 (9-98)||(34970300-34970389)
chr8 (9-101)||(21649054-21649146)
chr8 (4-91)||(23265247-23265334)
chr8 (1-92)||(28927768-28927858)
chr8 (4-99)||(40413250-40413344)
chr8 (4-67)||(41293640-41293702)
chr8 (1-43)||(1796570-1796612)
chr8 (2-68)||(10591790-10591856)
chr8 (4-74)||(13924099-13924169)
chr8 (1-43)||(14548767-14548809)
chr8 (2-56)||(20288621-20288675)
chr8 (2-56)||(21075250-21075304)
chr8 (1-67)||(36675412-36675478)
chr8 (1-43)||(37524370-37524412)
chr8 (3-97)||(38504259-38504353)
chr8 (2-52)||(40211680-40211730)
chr8 (1-67)||(43587728-43587794)
chr8 (2-56)||(44001144-44001198)
chr8 (1-38)||(9000961-9000998)
chr8 (1-62)||(9227356-9227417)
chr8 (2-43)||(13267028-13267069)
chr8 (3-68)||(21273627-21273692)
chr8 (1-74)||(23709063-23709136)
chr8 (3-67)||(3988994-3989058)
chr8 (1-73)||(7678819-7678891)
chr8 (3-67)||(9305915-9305979)
chr8 (3-43)||(30578343-30578383)
chr8 (1-33)||(37033053-37033085)
chr8 (1-49)||(39258991-39259039)
chr8 (1-69)||(40719560-40719628)
[»] chr7 (74 HSPs)
chr7 (1-99)||(2600420-2600518)
chr7 (3-93)||(37970022-37970112)
chr7 (3-102)||(640481-640580)
chr7 (7-93)||(47379653-47379739)
chr7 (1-97)||(41458788-41458884)
chr7 (1-99)||(11070315-11070413)
chr7 (3-98)||(44185265-44185360)
chr7 (1-91)||(38197748-38197838)
chr7 (7-96)||(28548124-28548213)
chr7 (1-101)||(25272678-25272778)
chr7 (1-97)||(39369389-39369485)
chr7 (3-93)||(23034205-23034295)
chr7 (9-98)||(384646-384735)
chr7 (1-93)||(12141971-12142062)
chr7 (1-97)||(26041397-26041493)
chr7 (1-93)||(27704522-27704614)
chr7 (2-86)||(33341024-33341108)
chr7 (1-99)||(155868-155965)
chr7 (3-93)||(36108261-36108350)
chr7 (1-67)||(42431810-42431876)
chr7 (1-74)||(41910096-41910169)
chr7 (3-67)||(33684769-33684833)
chr7 (1-93)||(48639277-48639369)
chr7 (3-102)||(29923760-29923858)
chr7 (3-74)||(41538569-41538640)
chr7 (5-100)||(47945074-47945169)
chr7 (5-100)||(47950504-47950599)
chr7 (1-56)||(48522243-48522298)
chr7 (1-68)||(49142434-49142501)
chr7 (1-67)||(12102627-12102693)
chr7 (3-93)||(24380613-24380703)
chr7 (3-93)||(25887672-25887761)
chr7 (1-67)||(30864335-30864401)
chr7 (52-102)||(32747370-32747420)
chr7 (1-55)||(35212887-35212941)
chr7 (1-67)||(38978579-38978645)
chr7 (1-74)||(45335949-45336023)
chr7 (3-56)||(10161859-10161912)
chr7 (1-74)||(22331122-22331195)
chr7 (3-56)||(44187780-44187833)
chr7 (3-91)||(2323382-2323470)
chr7 (1-93)||(5978666-5978757)
chr7 (7-67)||(7295560-7295620)
chr7 (3-67)||(10014873-10014937)
chr7 (1-69)||(33464953-33465021)
chr7 (1-93)||(47193014-47193105)
chr7 (3-98)||(2005818-2005912)
chr7 (1-56)||(27164766-27164821)
chr7 (3-74)||(37848531-37848602)
chr7 (1-43)||(18157127-18157169)
chr7 (1-67)||(19510275-19510341)
chr7 (2-56)||(25614750-25614804)
chr7 (1-67)||(33050270-33050336)
chr7 (1-43)||(40693470-40693512)
chr7 (1-99)||(45607111-45607208)
chr7 (3-101)||(46651761-46651858)
chr7 (1-67)||(48866848-48866914)
chr7 (1-38)||(5378714-5378751)
chr7 (1-106)||(6655497-6655601)
chr7 (2-43)||(27688725-27688766)
chr7 (1-38)||(31982144-31982181)
chr7 (2-67)||(37385151-37385216)
chr7 (1-74)||(40108211-40108283)
chr7 (1-38)||(40949849-40949886)
chr7 (2-43)||(44175633-44175674)
chr7 (1-38)||(46148253-46148290)
chr7 (1-33)||(4678150-4678182)
chr7 (3-67)||(7077671-7077735)
chr7 (3-67)||(8742472-8742536)
chr7 (45-93)||(27943088-27943136)
chr7 (2-98)||(32044868-32044964)
chr7 (3-99)||(37351877-37351972)
chr7 (1-33)||(43079584-43079616)
chr7 (3-43)||(43107701-43107741)
[»] chr3 (117 HSPs)
chr3 (1-101)||(2280264-2280364)
chr3 (1-98)||(14847405-14847502)
chr3 (1-93)||(16295551-16295643)
chr3 (9-93)||(29533856-29533940)
chr3 (7-91)||(50025579-50025663)
chr3 (16-102)||(42643339-42643425)
chr3 (1-91)||(47140569-47140659)
chr3 (2-91)||(33971971-33972060)
chr3 (3-98)||(38471731-38471826)
chr3 (3-100)||(9027702-9027799)
chr3 (2-91)||(43149237-43149326)
chr3 (1-93)||(1261267-1261359)
chr3 (17-93)||(9557824-9557900)
chr3 (2-93)||(33074961-33075052)
chr3 (3-96)||(25559793-25559886)
chr3 (3-99)||(36301096-36301190)
chr3 (1-74)||(49361748-49361821)
chr3 (1-99)||(2935397-2935495)
chr3 (8-98)||(10565146-10565235)
chr3 (3-93)||(34208356-34208446)
chr3 (1-91)||(48117423-48117513)
chr3 (1-67)||(50879682-50879748)
chr3 (3-81)||(51385344-51385422)
chr3 (3-99)||(43900861-43900957)
chr3 (1-67)||(28269893-28269959)
chr3 (2-74)||(9158947-9159019)
chr3 (1-68)||(21481851-21481918)
chr3 (2-93)||(29555733-29555824)
chr3 (1-67)||(3957936-3958002)
chr3 (1-67)||(13159748-13159814)
chr3 (1-99)||(14838931-14839029)
chr3 (1-67)||(28263632-28263698)
chr3 (1-91)||(29846785-29846875)
chr3 (1-99)||(32981008-32981105)
chr3 (1-67)||(34021381-34021447)
chr3 (1-67)||(37215149-37215215)
chr3 (1-91)||(46473215-46473304)
chr3 (5-99)||(50294011-50294104)
chr3 (1-67)||(52454010-52454076)
chr3 (2-91)||(27276822-27276911)
chr3 (4-101)||(43220026-43220123)
chr3 (2-67)||(47484367-47484432)
chr3 (1-62)||(50745636-50745697)
chr3 (2-67)||(54233419-54233484)
chr3 (1-101)||(25959427-25959526)
chr3 (3-67)||(35756069-35756133)
chr3 (3-67)||(36819045-36819109)
chr3 (3-75)||(45966702-45966774)
chr3 (3-91)||(47683879-47683967)
chr3 (7-98)||(7231894-7231984)
chr3 (1-56)||(20714330-20714385)
chr3 (11-73)||(1031339-1031401)
chr3 (1-99)||(1295419-1295516)
chr3 (7-89)||(25806420-25806502)
chr3 (1-67)||(30400074-30400140)
chr3 (1-67)||(41877775-41877841)
chr3 (3-105)||(44689892-44689994)
chr3 (1-98)||(622347-622443)
chr3 (4-93)||(884627-884716)
chr3 (4-73)||(5188326-5188395)
chr3 (1-98)||(7293987-7294083)
chr3 (1-102)||(11173537-11173637)
chr3 (1-98)||(32795923-32796019)
chr3 (2-67)||(32931836-32931901)
chr3 (2-91)||(44827041-44827130)
chr3 (1-74)||(48205132-48205205)
chr3 (50-103)||(52383135-52383188)
chr3 (1-101)||(11327195-11327295)
chr3 (3-99)||(20380776-20380871)
chr3 (3-67)||(23906905-23906969)
chr3 (3-55)||(28884569-28884621)
chr3 (1-73)||(35368698-35368770)
chr3 (1-101)||(50279971-50280071)
chr3 (63-103)||(52381252-52381292)
chr3 (3-74)||(29057737-29057808)
chr3 (1-67)||(33007447-33007514)
chr3 (1-56)||(39604175-39604230)
chr3 (3-62)||(43894908-43894967)
chr3 (1-68)||(48490430-48490497)
chr3 (1-43)||(1901868-1901910)
chr3 (1-43)||(1911314-1911356)
chr3 (55-101)||(3210560-3210606)
chr3 (1-43)||(8066442-8066484)
chr3 (3-93)||(28300539-28300628)
chr3 (3-73)||(29705992-29706062)
chr3 (1-91)||(31300889-31300979)
chr3 (1-43)||(31326795-31326837)
chr3 (10-96)||(32151989-32152075)
chr3 (1-43)||(32656062-32656104)
chr3 (1-67)||(35272114-35272180)
chr3 (2-56)||(36799486-36799540)
chr3 (1-67)||(37302992-37303058)
chr3 (1-43)||(41717350-41717392)
chr3 (1-67)||(42475895-42475961)
chr3 (3-73)||(44593055-44593125)
chr3 (1-67)||(53102820-53102886)
chr3 (2-55)||(2482604-2482657)
chr3 (2-99)||(9027961-9028057)
chr3 (1-38)||(26279971-26280008)
chr3 (1-38)||(36869784-36869821)
chr3 (1-38)||(41877558-41877595)
chr3 (1-98)||(51672950-51673046)
chr3 (1-38)||(51921500-51921537)
chr3 (2-67)||(53932309-53932374)
chr3 (3-56)||(54379395-54379448)
chr3 (3-43)||(275315-275355)
chr3 (3-67)||(2009743-2009807)
chr3 (1-49)||(3069511-3069559)
chr3 (1-104)||(6126541-6126644)
chr3 (1-100)||(30664590-30664687)
chr3 (35-91)||(31763928-31763984)
chr3 (3-43)||(41309089-41309129)
chr3 (3-43)||(44127134-44127174)
chr3 (1-93)||(44334694-44334785)
chr3 (3-43)||(47276374-47276414)
chr3 (3-43)||(49457654-49457694)
chr3 (1-33)||(51410893-51410925)
[»] chr5 (87 HSPs)
chr5 (3-93)||(3518272-3518362)
chr5 (1-93)||(10469839-10469931)
chr5 (1-91)||(12612911-12613001)
chr5 (3-93)||(31625968-31626058)
chr5 (3-93)||(35358827-35358917)
chr5 (1-78)||(5005200-5005277)
chr5 (7-100)||(1108091-1108188)
chr5 (3-98)||(29765920-29766015)
chr5 (1-91)||(43152954-43153044)
chr5 (1-101)||(17574108-17574208)
chr5 (22-93)||(8761755-8761826)
chr5 (3-101)||(33893675-33893773)
chr5 (9-99)||(37821027-37821117)
chr5 (1-91)||(39595361-39595450)
chr5 (1-74)||(4173035-4173108)
chr5 (3-91)||(8442248-8442336)
chr5 (1-56)||(30574306-30574361)
chr5 (1-92)||(34381099-34381189)
chr5 (1-67)||(15622131-15622197)
chr5 (2-75)||(9940142-9940215)
chr5 (2-67)||(33823612-33823677)
chr5 (28-93)||(34698890-34698954)
chr5 (9-74)||(38919941-38920006)
chr5 (1-93)||(125179-125270)
chr5 (1-69)||(2863636-2863704)
chr5 (1-53)||(19271946-19271998)
chr5 (4-67)||(28501707-28501770)
chr5 (2-97)||(31284283-31284377)
chr5 (3-74)||(40201031-40201102)
chr5 (2-56)||(2051014-2051068)
chr5 (1-67)||(4954553-4954619)
chr5 (1-67)||(7077257-7077323)
chr5 (1-67)||(9596732-9596798)
chr5 (1-67)||(12512880-12512946)
chr5 (1-103)||(12718263-12718364)
chr5 (2-56)||(14914458-14914512)
chr5 (1-67)||(19376050-19376116)
chr5 (6-100)||(33567125-33567218)
chr5 (1-55)||(41192674-41192728)
chr5 (1-67)||(42364516-42364582)
chr5 (2-67)||(3263426-3263491)
chr5 (7-64)||(5043018-5043075)
chr5 (2-91)||(6458855-6458944)
chr5 (2-67)||(8959248-8959313)
chr5 (1-74)||(9957112-9957185)
chr5 (1-74)||(14522875-14522948)
chr5 (1-98)||(15639472-15639568)
chr5 (3-56)||(22920421-22920474)
chr5 (1-102)||(24792540-24792639)
chr5 (1-97)||(9636047-9636142)
chr5 (1-65)||(10522862-10522926)
chr5 (3-67)||(11464041-11464105)
chr5 (3-67)||(17489437-17489501)
chr5 (1-101)||(19127211-19127310)
chr5 (1-81)||(25585360-25585440)
chr5 (3-67)||(27392620-27392684)
chr5 (3-67)||(28811517-28811581)
chr5 (6-101)||(2117525-2117619)
chr5 (3-74)||(3849588-3849658)
chr5 (2-65)||(11666267-11666330)
chr5 (1-56)||(11880916-11880971)
chr5 (2-109)||(33243618-33243724)
chr5 (1-56)||(38010959-38011014)
chr5 (1-55)||(3031921-3031975)
chr5 (2-56)||(6865716-6865770)
chr5 (4-74)||(12203235-12203305)
chr5 (1-67)||(12779524-12779590)
chr5 (5-43)||(20040877-20040915)
chr5 (3-101)||(26626704-26626801)
chr5 (6-68)||(39458733-39458795)
chr5 (1-59)||(42909806-42909864)
chr5 (2-59)||(471902-471959)
chr5 (3-56)||(4292872-4292925)
chr5 (1-62)||(5130301-5130362)
chr5 (2-67)||(9594566-9594631)
chr5 (1-93)||(9714028-9714120)
chr5 (9-98)||(11306791-11306879)
chr5 (1-62)||(12891019-12891080)
chr5 (3-56)||(13734289-13734342)
chr5 (2-67)||(20719933-20719998)
chr5 (3-68)||(35595903-35595968)
chr5 (2-67)||(36786176-36786241)
chr5 (3-67)||(5386159-5386223)
chr5 (3-67)||(12417715-12417779)
chr5 (1-93)||(24431511-24431602)
chr5 (2-38)||(34428250-34428286)
chr5 (3-43)||(40566159-40566199)
[»] chr1 (94 HSPs)
chr1 (1-101)||(46903557-46903657)
chr1 (3-93)||(27787578-27787668)
chr1 (1-102)||(31666089-31666189)
chr1 (1-98)||(37741839-37741936)
chr1 (1-93)||(2827602-2827694)
chr1 (7-98)||(644789-644880)
chr1 (1-93)||(6396414-6396506)
chr1 (1-99)||(24158737-24158835)
chr1 (3-93)||(28457239-28457329)
chr1 (1-91)||(37947114-37947204)
chr1 (3-100)||(31244620-31244717)
chr1 (3-99)||(8577388-8577484)
chr1 (3-93)||(21446110-21446200)
chr1 (4-99)||(40052996-40053091)
chr1 (16-99)||(43757688-43757771)
chr1 (22-93)||(49615167-49615238)
chr1 (4-101)||(19920852-19920949)
chr1 (1-75)||(51436342-51436415)
chr1 (1-74)||(40240022-40240095)
chr1 (1-98)||(11038349-11038440)
chr1 (2-89)||(44714329-44714418)
chr1 (3-75)||(43105194-43105266)
chr1 (3-74)||(26760651-26760722)
chr1 (1-56)||(29362621-29362676)
chr1 (1-96)||(30596801-30596896)
chr1 (1-100)||(41564765-41564864)
chr1 (1-67)||(13813645-13813711)
chr1 (1-103)||(23399871-23399973)
chr1 (1-67)||(39010901-39010967)
chr1 (1-99)||(48325309-48325407)
chr1 (1-91)||(48962073-48962163)
chr1 (1-102)||(27352717-27352817)
chr1 (1-74)||(30414951-30415024)
chr1 (1-98)||(30631733-30631829)
chr1 (6-91)||(48336349-48336434)
chr1 (1-53)||(7371880-7371932)
chr1 (42-98)||(8312273-8312329)
chr1 (1-97)||(11121568-11121663)
chr1 (2-98)||(21255672-21255768)
chr1 (1-97)||(27895649-27895744)
chr1 (3-67)||(29489277-29489341)
chr1 (1-93)||(29638802-29638894)
chr1 (3-55)||(48028615-48028667)
chr1 (3-74)||(1100306-1100377)
chr1 (2-73)||(5477075-5477146)
chr1 (1-55)||(27954315-27954369)
chr1 (1-99)||(33422106-33422203)
chr1 (1-67)||(36669288-36669354)
chr1 (1-67)||(40610316-40610382)
chr1 (2-56)||(42843273-42843327)
chr1 (1-67)||(43196007-43196073)
chr1 (1-99)||(44112541-44112638)
chr1 (1-74)||(4618731-4618804)
chr1 (4-99)||(18959093-18959189)
chr1 (3-56)||(26501384-26501437)
chr1 (2-74)||(835959-836031)
chr1 (1-73)||(4604616-4604688)
chr1 (3-99)||(30687141-30687236)
chr1 (1-81)||(35846224-35846303)
chr1 (9-101)||(36930641-36930732)
chr1 (3-67)||(46948068-46948132)
chr1 (1-56)||(2257623-2257678)
chr1 (2-49)||(9011733-9011780)
chr1 (38-93)||(21263147-21263202)
chr1 (1-56)||(50527986-50528041)
chr1 (5-67)||(366748-366810)
chr1 (1-67)||(16836032-16836098)
chr1 (1-43)||(25098730-25098772)
chr1 (1-67)||(28253102-28253168)
chr1 (3-73)||(30530486-30530556)
chr1 (1-67)||(31290126-31290192)
chr1 (3-97)||(34941808-34941902)
chr1 (1-43)||(40595996-40596038)
chr1 (2-68)||(41885809-41885875)
chr1 (1-43)||(43612024-43612066)
chr1 (1-43)||(43640929-43640971)
chr1 (1-43)||(47059832-47059874)
chr1 (1-43)||(48872466-48872508)
chr1 (1-67)||(50659110-50659176)
chr1 (1-43)||(51339642-51339684)
chr1 (7-56)||(5959481-5959530)
chr1 (3-56)||(6841880-6841933)
chr1 (2-43)||(16987535-16987576)
chr1 (1-66)||(22389444-22389509)
chr1 (2-55)||(27578270-27578323)
chr1 (1-38)||(31436907-31436944)
chr1 (2-67)||(32966355-32966420)
chr1 (1-98)||(44730731-44730827)
chr1 (2-67)||(49189129-49189194)
chr1 (1-74)||(50460623-50460696)
chr1 (3-67)||(36690490-36690554)
chr1 (3-67)||(36706591-36706655)
chr1 (3-55)||(36794704-36794756)
chr1 (1-33)||(45740496-45740528)
[»] chr2 (98 HSPs)
chr2 (3-105)||(38724197-38724299)
chr2 (3-99)||(34373097-34373193)
chr2 (3-93)||(43026025-43026115)
chr2 (3-100)||(40721860-40721957)
chr2 (4-96)||(13850073-13850165)
chr2 (1-101)||(25094439-25094539)
chr2 (3-101)||(304876-304974)
chr2 (1-106)||(4858200-4858305)
chr2 (7-93)||(1151622-1151708)
chr2 (3-93)||(27329001-27329091)
chr2 (2-91)||(8757632-8757721)
chr2 (22-91)||(9377652-9377721)
chr2 (1-93)||(30340080-30340173)
chr2 (7-91)||(35518368-35518452)
chr2 (35-98)||(24727523-24727586)
chr2 (3-93)||(11728013-11728103)
chr2 (1-74)||(43205180-43205253)
chr2 (22-102)||(23141462-23141542)
chr2 (22-102)||(23553252-23553332)
chr2 (1-100)||(13711148-13711246)
chr2 (22-97)||(37827673-37827748)
chr2 (1-91)||(19523295-19523385)
chr2 (3-97)||(33857306-33857400)
chr2 (3-93)||(34141532-34141622)
chr2 (1-91)||(35705811-35705901)
chr2 (1-67)||(44484574-44484640)
chr2 (1-91)||(45202026-45202116)
chr2 (1-74)||(13881182-13881255)
chr2 (1-74)||(14021307-14021380)
chr2 (1-74)||(35203660-35203733)
chr2 (1-74)||(41156914-41156987)
chr2 (3-91)||(11828714-11828802)
chr2 (2-101)||(24491561-24491660)
chr2 (1-100)||(43725292-43725390)
chr2 (3-93)||(12256990-12257080)
chr2 (1-67)||(23048001-23048067)
chr2 (3-101)||(35007985-35008083)
chr2 (1-67)||(36383549-36383615)
chr2 (2-56)||(36909772-36909826)
chr2 (1-74)||(17999831-17999904)
chr2 (1-98)||(38027502-38027599)
chr2 (1-73)||(3091828-3091900)
chr2 (1-93)||(11229214-11229305)
chr2 (6-74)||(27538843-27538911)
chr2 (7-67)||(38572032-38572092)
chr2 (2-53)||(5962726-5962777)
chr2 (3-102)||(9384464-9384563)
chr2 (1-56)||(19631475-19631530)
chr2 (1-56)||(19828376-19828431)
chr2 (40-99)||(33569694-33569753)
chr2 (3-74)||(37076742-37076813)
chr2 (2-97)||(37631255-37631350)
chr2 (4-67)||(37966446-37966509)
chr2 (3-73)||(11164288-11164358)
chr2 (1-67)||(13104566-13104632)
chr2 (1-67)||(32750085-32750151)
chr2 (1-98)||(546273-546369)
chr2 (1-74)||(12208529-12208602)
chr2 (2-99)||(21805673-21805769)
chr2 (3-67)||(6884999-6885063)
chr2 (3-71)||(16463381-16463449)
chr2 (9-73)||(27529622-27529686)
chr2 (3-67)||(29871273-29871337)
chr2 (22-74)||(37064166-37064218)
chr2 (1-96)||(3959983-3960078)
chr2 (1-36)||(4263813-4263848)
chr2 (1-56)||(10550388-10550443)
chr2 (1-56)||(19913871-19913926)
chr2 (1-56)||(29893697-29893752)
chr2 (1-56)||(30413661-30413716)
chr2 (11-98)||(32755775-32755862)
chr2 (3-74)||(38598260-38598331)
chr2 (1-55)||(3196017-3196071)
chr2 (1-43)||(5167684-5167726)
chr2 (3-97)||(6328756-6328849)
chr2 (1-67)||(34144470-34144535)
chr2 (1-99)||(42251807-42251904)
chr2 (3-81)||(43559989-43560067)
chr2 (9-74)||(3366126-3366191)
chr2 (3-56)||(6851588-6851641)
chr2 (2-99)||(7497878-7497974)
chr2 (3-56)||(10466117-10466170)
chr2 (2-43)||(23358521-23358562)
chr2 (1-38)||(32688491-32688528)
chr2 (17-74)||(38533109-38533166)
chr2 (1-74)||(38777978-38778051)
chr2 (1-33)||(5067593-5067625)
chr2 (1-49)||(10688028-10688076)
chr2 (3-67)||(12358402-12358466)
chr2 (2-74)||(20247778-20247850)
chr2 (3-67)||(22390241-22390305)
chr2 (1-65)||(23391149-23391213)
chr2 (3-43)||(25801753-25801793)
chr2 (7-67)||(27307163-27307223)
chr2 (1-73)||(30856894-30856966)
chr2 (1-53)||(30973923-30973975)
chr2 (2-62)||(35798297-35798357)
chr2 (1-65)||(38021443-38021507)
[»] chr4 (95 HSPs)
chr4 (1-93)||(1987605-1987697)
chr4 (2-104)||(46309004-46309106)
chr4 (1-93)||(34538017-34538109)
chr4 (2-93)||(9827877-9827968)
chr4 (1-91)||(4949128-4949218)
chr4 (1-97)||(43982984-43983080)
chr4 (3-99)||(46799845-46799940)
chr4 (3-98)||(30250185-30250280)
chr4 (1-91)||(45678350-45678440)
chr4 (1-100)||(4878054-4878153)
chr4 (3-93)||(26442280-26442370)
chr4 (3-93)||(36946984-36947074)
chr4 (3-102)||(46686322-46686413)
chr4 (1-100)||(50291369-50291468)
chr4 (1-67)||(8026682-8026748)
chr4 (3-69)||(29577352-29577418)
chr4 (6-100)||(29863643-29863737)
chr4 (1-91)||(33776981-33777071)
chr4 (1-98)||(46791878-46791975)
chr4 (1-101)||(47998681-47998779)
chr4 (2-98)||(51389404-51389499)
chr4 (1-96)||(19807307-19807402)
chr4 (2-97)||(21766635-21766730)
chr4 (1-92)||(31318835-31318926)
chr4 (1-56)||(41495100-41495155)
chr4 (1-67)||(5208245-5208311)
chr4 (1-67)||(27001327-27001393)
chr4 (16-98)||(37732051-37732133)
chr4 (1-55)||(48650186-48650240)
chr4 (1-67)||(51377211-51377277)
chr4 (3-93)||(45418150-45418241)
chr4 (3-111)||(46844114-46844223)
chr4 (2-67)||(47105999-47106064)
chr4 (3-68)||(53781754-53781819)
chr4 (1-73)||(9162153-9162225)
chr4 (2-98)||(31275234-31275329)
chr4 (3-67)||(36728540-36728604)
chr4 (2-74)||(46355202-46355274)
chr4 (1-97)||(49424708-49424804)
chr4 (2-62)||(54801410-54801470)
chr4 (3-74)||(8487724-8487795)
chr4 (2-53)||(13267410-13267461)
chr4 (1-100)||(18874809-18874908)
chr4 (2-69)||(28899132-28899199)
chr4 (9-60)||(54803255-54803306)
chr4 (1-91)||(3475955-3476045)
chr4 (1-67)||(4896418-4896484)
chr4 (3-93)||(5234364-5234453)
chr4 (7-93)||(6093497-6093583)
chr4 (1-67)||(7037402-7037468)
chr4 (1-91)||(31413680-31413770)
chr4 (2-100)||(31658007-31658104)
chr4 (1-43)||(34027983-34028025)
chr4 (2-100)||(46567017-46567114)
chr4 (1-55)||(53292237-53292291)
chr4 (1-67)||(56025343-56025409)
chr4 (2-67)||(15638218-15638283)
chr4 (2-67)||(18568733-18568798)
chr4 (2-91)||(22893956-22894045)
chr4 (2-91)||(22945624-22945713)
chr4 (50-99)||(35037718-35037767)
chr4 (42-99)||(55960828-55960885)
chr4 (1-65)||(3223076-3223140)
chr4 (9-97)||(28676043-28676130)
chr4 (1-49)||(31221500-31221548)
chr4 (1-81)||(41170859-41170939)
chr4 (1-101)||(42915104-42915203)
chr4 (1-56)||(924991-925046)
chr4 (1-52)||(1796452-1796503)
chr4 (2-49)||(2193745-2193792)
chr4 (3-74)||(24310432-24310503)
chr4 (2-65)||(25936328-25936391)
chr4 (1-56)||(43434427-43434482)
chr4 (1-67)||(4550421-4550487)
chr4 (3-97)||(9032869-9032963)
chr4 (3-101)||(9096026-9096123)
chr4 (2-56)||(20956511-20956565)
chr4 (7-101)||(22071591-22071684)
chr4 (1-43)||(24235407-24235449)
chr4 (2-56)||(31048976-31049030)
chr4 (4-74)||(32574367-32574437)
chr4 (5-59)||(41119452-41119506)
chr4 (1-67)||(44368120-44368186)
chr4 (1-67)||(55267919-55267985)
chr4 (1-101)||(39241187-39241287)
chr4 (1-38)||(46794448-46794485)
chr4 (1-92)||(54036424-54036513)
chr4 (1-93)||(15596483-15596574)
chr4 (22-98)||(18944393-18944469)
chr4 (2-74)||(37775338-37775410)
chr4 (3-67)||(38844408-38844472)
chr4 (1-33)||(38952776-38952808)
chr4 (1-73)||(46173624-46173696)
chr4 (1-61)||(46912723-46912783)
chr4 (3-98)||(53091114-53091212)
[»] chr6 (42 HSPs)
chr6 (3-101)||(608545-608643)
chr6 (7-99)||(34976710-34976801)
chr6 (3-75)||(22422239-22422311)
chr6 (26-99)||(3335344-3335417)
chr6 (4-93)||(35050261-35050350)
chr6 (7-98)||(7303992-7304083)
chr6 (1-74)||(2165211-2165284)
chr6 (1-74)||(2176844-2176917)
chr6 (1-74)||(6997461-6997534)
chr6 (3-91)||(9395231-9395319)
chr6 (3-55)||(12151787-12151839)
chr6 (3-98)||(26378273-26378367)
chr6 (1-67)||(237316-237382)
chr6 (1-91)||(17835699-17835789)
chr6 (2-91)||(10557497-10557586)
chr6 (3-67)||(19713083-19713147)
chr6 (1-67)||(11017469-11017535)
chr6 (1-67)||(15328576-15328642)
chr6 (1-91)||(16121239-16121329)
chr6 (3-101)||(17442911-17443009)
chr6 (1-67)||(25924782-25924848)
chr6 (3-100)||(32253869-32253966)
chr6 (7-67)||(1803962-1804022)
chr6 (1-101)||(16533144-16533244)
chr6 (1-36)||(12044417-12044452)
chr6 (1-43)||(11742926-11742968)
chr6 (2-52)||(12501562-12501612)
chr6 (1-67)||(15364746-15364812)
chr6 (1-43)||(16743208-16743250)
chr6 (5-91)||(32135331-32135417)
chr6 (1-43)||(32644699-32644741)
chr6 (2-67)||(1897774-1897839)
chr6 (1-38)||(21443775-21443812)
chr6 (1-102)||(32729976-32730076)
chr6 (3-67)||(2582751-2582815)
chr6 (7-43)||(3089050-3089086)
chr6 (3-67)||(3660271-3660335)
chr6 (1-105)||(7693402-7693505)
chr6 (2-50)||(12499962-12500010)
chr6 (2-50)||(12507291-12507339)
chr6 (2-50)||(12508891-12508939)
chr6 (1-33)||(32457204-32457236)
[»] scaffold0592 (1 HSPs)
scaffold0592 (1-89)||(997-1085)
[»] scaffold0036 (2 HSPs)
scaffold0036 (1-93)||(54554-54646)
scaffold0036 (3-99)||(18093-18187)
[»] scaffold0542 (1 HSPs)
scaffold0542 (1-101)||(2929-3028)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-91)||(3030-3120)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-74)||(17125-17198)
[»] scaffold0651 (1 HSPs)
scaffold0651 (1-92)||(4744-4835)
[»] scaffold0514 (2 HSPs)
scaffold0514 (1-56)||(1425-1480)
scaffold0514 (3-93)||(1739-1829)
[»] scaffold0014 (1 HSPs)
scaffold0014 (7-93)||(145140-145226)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-67)||(147174-147240)
[»] scaffold0508 (1 HSPs)
scaffold0508 (1-101)||(11421-11520)
[»] scaffold0172 (1 HSPs)
scaffold0172 (3-67)||(17064-17128)
[»] scaffold0501 (1 HSPs)
scaffold0501 (1-67)||(10434-10500)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-99)||(15076-15172)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-67)||(31518-31584)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-102)||(34923-35022)
[»] scaffold0184 (1 HSPs)
scaffold0184 (5-97)||(16483-16574)
[»] scaffold0078 (1 HSPs)
scaffold0078 (5-97)||(56270-56361)
[»] scaffold0024 (1 HSPs)
scaffold0024 (2-74)||(48742-48814)
[»] scaffold0004 (1 HSPs)
scaffold0004 (3-67)||(249060-249124)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-67)||(9517-9583)
[»] scaffold0332 (1 HSPs)
scaffold0332 (3-56)||(616-669)
[»] scaffold0076 (1 HSPs)
scaffold0076 (6-67)||(11284-11345)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-93)||(6904-6995)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-99)||(36087-36186)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-101)||(16478-16577)


Alignment Details
Target: chr8 (Bit Score: 150; Significance: 4e-79; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 124 - 381
Target Start/End: Original strand, 29165365 - 29165619
Alignment:
Q  124 acacacaaaatagagctctgctgtgtaagacactggattcactcaggcccctaattcaaggaatgccagcccccgactct----atcgcaatccttttta 219  Q
    ||||||||||| ||||||||   ||  ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    ||| ||||||||||||    
T  29165365 acacacaaaattgagctctg---tgatagacactggattcgctcaggcccctaattcaaggaatgccagccctcgactctcactatcacaatccttttta 29165461  T
Q  220 tttttatttaaagagtgttacacctcaggtttcattgccgtatacaatggcaattccttaacttgtctctcttatttgctttcgattggtccttgggcta 319  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||| || |||||||||||||       
T  29165462 attttatttaaagagtgttacacctcaggttttattgccgtatacaatggtaattccataacttgtccctcttatttgctgtcaattggtccttggg--- 29165558  T
Q  320 ttgattttgatgccaacgatcacattcgggtaaaagtctgaattctctaaattttctacctt 381  Q
     ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  29165559 -tgattttcatgccaacaatcacattcgggtaaaagtcttaattctctaaattttctacctt 29165619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 5742640 - 5742543
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  5742640 ctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggatgtaccaaaatggttgtcaaaatatcactactctt 5742543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28156290 - 28156382
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  28156290 cctttttctctctccaatgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcact 28156382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 45405814 - 45405720
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||  ||||| ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  45405814 ttctctctttattgtttttgaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 45405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 32674216 - 32674117
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||| || ||||| ||| ||||||||||||  | |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  32674216 cctttttctctttctattgtttttaaccaatgagaagggataacaacaaagttgtctcaaaggttgtactaaaatggttgtcaaaatatcactactcttt 32674117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 38939172 - 38939084
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||| || ||||| ||| ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38939172 ttttctctttctattgt-tttaaccaatgagaagagagaacaacaaagttatctcaaaaattgtaccaaaatggttgtcaaaatatcact 38939084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 42651013 - 42651097
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||| ||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||  ||||||||    
T  42651013 tctctctctattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaatatca 42651097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 1422685 - 1422596
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| |||||||||||| || |||||| ||||| |||||| ||||||||||| |||||| |||||  ||||||||    
T  1422685 ctttttctctctccattgtttttgaccaatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaatagttgttcaaatatca 1422596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 14233627 - 14233554
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  14233627 ctttttctcgctccattgttttttaccaatgagaagagagaacaacaaagttgtcacaaaagttataccaaaat 14233554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 41776264 - 41776362
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||||||||| |||||||||||| |||| || ||||||| |||||| ||||||||||| |||||  |||||  |||||||| | |||||||    
T  41776264 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctttt 41776362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25430733 - 25430830
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||| ||||| |||||||||| |||||| |  ||||||| |||||| |||||||||||||||||  |||||  |||||||||| ||||    
T  25430733 cctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 25430830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 33635664 - 33635753
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcac 92  Q
    |||| ||||||| ||||  ||||||||||||||||| ||||||| |||||| |||||||  |||||  ||||||||||||||||||||||    
T  33635664 ttttcctctctctattggttttgaccaatgagaagagagaacaataaagttatctcaaagattgtattaaaatggttgtcaaaatatcac 33635753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34838254 - 34838157
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||| ||||| |||||||||| |||||| |  ||||||| ||||||  ||||||||||||||||  |||||  |||||||||||||||    
T  34838254 cctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaagagttgttcaaatatcactgctct 34838157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 8233478 - 8233406
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||| ||  ||||||||||| |||||    
T  8233478 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaat 8233406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 6243123 - 6243194
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||| |||||||||||| |||| || |||||||| ||||| ||||||||||| |||||    
T  6243123 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaa 6243194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18550066 - 18550156
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||| ||||| ||||| |||| |||||| |  ||||||| |||||| |||||||||||||||||| |||||  ||||||||    
T  18550066 cctttttctctctctattgtttttgatcaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatca 18550156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22203199 - 22203101
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||| |||||||| |||||||||| | |||| || ||||||| |||||| ||||||||||| |||||  |||||  |||||||| |||||||    
T  22203199 cctttttctctttccattgtttttgaccaatcaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctctt 22203101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34247861 - 34247951
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||| || ||||| |||||||||||| |||| |||||||||| |||||| ||||||||||  ||||| ||||||  ||||||||    
T  34247861 cctttttctctttctattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaagttgtctcaaaagggttgtacaaatatca 34247951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12045637 - 12045538
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| ||||||||||||||||| | || || || ||||||  ||| ||| |||| ||||||||||  |||||||| ||||||||    
T  12045637 cctttttctctctccattgtttttgaccaatgagaagagacaagaagaaggttgtcaaaaaggttatacc-aaatggttgttcaaatatcattgctcttt 12045539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22836123 - 22836023
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||| || ||||||| ||| || ||||| ||||| |||||  |||||  |||||||| | ||||||    
T  22836123 cctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgtagcaaaaaagttgttcaaatatcattactcttt 22836024  T
Q  101 t 101  Q
    |    
T  22836023 t 22836023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 37471732 - 37471820
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||| |||||||||||| |||| || |||||||  ||||| ||||||||||| |||||  |||||  ||||||||    
T  37471732 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatca 37471820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 34578306 - 34578231
Alignment:
Q  16 attgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||| ||||| |||| |||||| ||||||||||||||||| ||||| || ||||||||| ||||| |||||||||    
T  34578306 attgtttttgatcaataagaagagagaacaacaaagttgtcccaaaaattataccaaaatagttgttaaaatatca 34578231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2597144 - 2597078
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  2597144 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 2597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22767217 - 22767283
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||||||||    
T  22767217 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 3394685 - 3394612
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    ||||||||||||||||| | ||| | ||||||||||| ||||||| ||||||||| |||||||| || ||||||    
T  3394685 ctttttctctctccattatttttaatcaatgagaagagagaacaataaagttgtcccaaaagttatatcaaaat 3394612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 28713182 - 28713279
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||| ||||| || ||||||| |||||| |  ||||||| |||||| ||||| |||||||||||  |||||  |||||||||| ||||||    
T  28713182 tttttctctctctattgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28713279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 28720529 - 28720626
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||| ||||| || ||||||| |||||| |  ||||||| |||||| ||||| |||||||||||  |||||  |||||||||| ||||||    
T  28720529 tttttctctctctattgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28720626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 28728171 - 28728268
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||| ||||| || ||||||| |||||| |  ||||||| |||||| ||||| |||||||||||  |||||  |||||||||| ||||||    
T  28728171 tttttctctctctattgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 28728268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 30927914 - 30927849
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  30927914 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 30927849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 32185648 - 32185595
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||||||| |||||| |||| ||||||||||||    
T  32185648 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 32185595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23258119 - 23258222
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||| |||||||| |||||||||||| |||| |||| ||  |||||||| ||||| ||||  | ||||||||||  |||||||||| ||||||    
T  23258119 cctttttctctttccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttc-aaatggttgttcaaatatcactactcttt 23258217  T
Q  101 tataa 105  Q
     ||||    
T  23258218 aataa 23258222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 27300433 - 27300525
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||| ||||| |||||||||| |||||| |  |||||||  ||||| ||||||||||||| |||  |||||  ||||||||||    
T  27300433 cctttttctctctctattgtttttgaccaataagaagagaatacaacaagattgtcccaaaagttgtaccgaaagagttgttcaaatatcact 27300525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29910196 - 29910093
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||| |||||||| ||||| ||  ||||||||||||| |||| |  |||||||||   |||||||| | |||||||||||||| |||||||| ||||||    
T  29910196 cctttctctctctctattgttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgt-caaaaatggttgtcaatatatcactactcttt 29910098  T
Q  101 tataa 105  Q
    |||||    
T  29910097 tataa 29910093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 34883257 - 34883341
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||| | |||||  ||| |||||| |||||||||| ||||| ||||||||||||| ||||| |||||  ||||||||    
T  34883257 tctctctccattatttttgattaataagaagagagaacaacaaggttgtatcaaaagttgtactaaaatagttgtttaaatatca 34883341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1065504 - 1065607
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||  ||||||||||| ||||| ||| || | ||||||||     ||||| |||  |||||||| ||||||||    
T  1065504 cctttttctctctccattgtttttgaccaaaaagaagatagaaaaacaaggttatcactaaagttgtcatggaatggatgtacaaatatcattgctcttt 1065603  T
Q  101 tata 104  Q
    ||||    
T  1065604 tata 1065607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7129620 - 7129675
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||| |||| |||||||||| |||||| |||| ||||||||||||    
T  7129620 cctttttctctctccgttgtttttgaccaataagaagagagaaaaacaaagttgtc 7129675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24946089 - 24946182
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||||||| |||||||||||| |||  ||   || ||||||||  |||||||||| | |||||||||||  |||||||||||||||    
T  24946089 cctttttctctctccattgtttttgaccaatgaaaagtgag---aaaaaagttgtaccaaaagttgt-ctaaaatggttgttcaaatatcactgctct 24946182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30925638 - 30925541
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc-tcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| || |||||||||  |||||||||||  |||||||||||  |||||||||| |||||    
T  30925638 cctttttctctctccattgtttttaaccaatgaaaagagagaa-aaaaaagttgtcaccaaaagttgta-taaaatggttgttcaaatatcactactctt 30925541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 43590783 - 43590842
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    |||||||||||||||||| |||||||||||| |||| || |||| ||| |||||||||||    
T  43590783 tttttctctctccattgtttttgaccaatgaaaagagagcacaataaaattgtctcaaaa 43590842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 426188 - 426254
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| || |||||||    
T  426188 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgt 426254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13884403 - 13884469
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||||| |||| |||||| |||| |||||| ||||| | ||||||||    
T  13884403 cctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaagttgt 13884469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19723190 - 19723124
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||| ||| |||||| |||| ||||| |||||| | ||||||||    
T  19723190 cctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgt 19723124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33692808 - 33692898
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||| |||||||||| | |||||||||||| |||| || |||||||||||||| ||||| || || |||||  |||||  ||||||||    
T  33692808 cctttttttctctccattatttttgaccaatgaaaagagagcacaacaaagttgtcccaaaaattataacaaaaaagttgttcaaatatca 33692898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41273602 - 41273656
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||    
T  41273602 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgt 41273656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 42443195 - 42443292
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    ||||| |||||||||||| ||||||||||||||||  |||| || || ||||||  |||| ||||||| |||| |||||  |||||||| |||||||||    
T  42443195 tttttttctctccattgtttttgaccaatgagaagggagaagaagaaggttgtcaaaaaatttgtacc-aaatagttgttcaaatatcattgctctttt 42443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5502447 - 5502488
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagataga 42  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  5502447 cctttttctctctccattgtttttgaccaatgaaaagataga 5502488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6005031 - 6005127
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||| |||||||||||| |||||||||||| |||| |||| |  |||||||||  | |||||||||| ||||||||||  ||| |||| ||||||    
T  6005031 cctttttttctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttgtacc-aaatggttgttcaaacatcattgctct 6005127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 11138984 - 11139049
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||| |||| | |||||||||| | ||||||||| |||||||||||| | ||||||||    
T  11138984 ctttttctctcttcattatttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgt 11139049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 34970300 - 34970389
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||| ||| |||||| |||||| |||| |||||||||||  | |||||||| |  |||||  ||||||||||||| ||||||    
T  34970300 tctctccattgtttttaaccaataagaagagagaaaaacaaagttgttactaaagttgtccttaaatgaatgtcaaaatatcattgctct 34970389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 21649146 - 21649054
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||| | |||||||||| | |||| || ||||||| |||||| ||||||||||| |||||  |||||  |||||||| | |||||||    
T  21649146 tctctccattatttttgaccaataaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctttt 21649054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 23265334 - 23265247
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||| | |||||| |||||||||| | |||| || |||||||| ||||| ||||||||||| |||||  |||||  ||||||||    
T  23265334 ttttctctgttcattgtttttgaccaataaaaagagagcacaacaaaattgtcgcaaaagttgtaacaaaaaagttgtttaaatatca 23265247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28927768 - 28927858
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcac 92  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||| ||||| || || | ||||||||||  |||||||||    
T  28927768 cctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaaattttatc-aaatggttgttcaaatatcac 28927858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 40413344 - 40413250
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||||||||| |||||| ||||| |||| |||| ||  ||||| ||  |||||||||| | ||||||||||  |||||||||| |||||    
T  40413344 ttttctctctccattgtttttgactaatgaaaagagagaaaaaagaagttatcataaaagttgtatc-aaatggttgttcaaatatcactactctt 40413250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 41293702 - 41293640
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||| |||||||||| |||||| |||| ||| |||||||| | ||||||||    
T  41293702 ttttctctctccattgtttttgaccaataagaagagagaaaaac-aagttgtcactaaagttgt 41293640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1796570 - 1796612
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  1796570 cctttttctctctccattgtttttgaccaatgaaaagagagaa 1796612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 10591856 - 10591790
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    |||||| |||||||||||| |||||  ||||| || |||| |||||||||||||| ||||| |||||    
T  10591856 ctttttttctctccattgtttttgagaaatgaaaaaatagcacaacaaagttgtcccaaaaattgta 10591790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 13924099 - 13924169
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||| |||||| ||||  ||| ||||||||||||| || |||||||  ||||| |||||||||||||||||    
T  13924099 ttttttctctctattggttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaa 13924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14548809 - 14548767
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||    
T  14548809 cctttttctctctccattgttttttaccaatgagaagagagaa 14548767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 20288621 - 20288675
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||| |||||| |||  ||||| ||||||    
T  20288621 ctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtc 20288675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 21075250 - 21075304
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||| |||||| |||  ||||| ||||||    
T  21075250 ctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtc 21075304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36675412 - 36675478
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||| ||||||| ||||| |||||||||| | |||| |||||||||||||| || ||| ||||||    
T  36675412 ccttttcctctctctattgtttttgaccaataacaagaaagaacaacaaagttatcccaagagttgt 36675478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37524412 - 37524370
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  37524412 cctttttctctctccattgtttttgaccaatgaaaagagagaa 37524370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 38504259 - 38504353
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||| |||||||||| | |||| |||| |||||| ||||| | ||| |||||   |||||| |||  |||||||| |||||    
T  38504259 tttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatggatgtacaaatatcattgctc 38504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 40211730 - 40211680
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagt 52  Q
    ||||||||||||||||||| ||| |||||| |||||| |||| ||||||||    
T  40211730 ctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagt 40211680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43587728 - 43587794
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||  ||| |||||| | |||| |||| |||||||||||| | ||||||||    
T  43587728 cctttttctctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgt 43587794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 44001144 - 44001198
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||| |||||  |||||| ||| ||||||    
T  44001144 ctttttctctctccattgtatttgaccaataagaagggagaacatcaaggttgtc 44001198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9000998 - 9000961
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  9000998 cctttttctctctccattgtttttgaccaatgaaaaga 9000961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9227356 - 9227417
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    ||||||||| |||| ||||| |||||||||| | |||||||||||| ||| ||||| |||||    
T  9227356 cctttttctttctcaattgtttttgaccaataaaaagatagaacaataaaattgtcccaaaa 9227417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 13267069 - 13267028
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    ||||||||||||||||||| |||||||||| |||||| ||||    
T  13267069 ctttttctctctccattgtttttgaccaataagaagagagaa 13267028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 21273692 - 21273627
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    |||||||||||| ||||| ||| |||||||| |||| |||| |  ||||||||| |||||||||||    
T  21273692 tttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgta 21273627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23709063 - 23709136
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||| |||||  ||||||||||| |||| || | ||||| |||||| ||||| ||||| |||||    
T  23709063 cctttttctctctctattgttcttgaccaatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaa 23709136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 3988994 - 3989058
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||| ||||| |||| |||| ||  |||||||| || |||||||    
T  3988994 tttttctctctccattgtttttgactaatgaaaagagagaaaaaagaagttgtcacataagttgt 3989058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7678819 - 7678891
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    ||||||| |||||||||||| ||| |||||||| |||| |||| ||  |||||||  ||||||||||| ||||    
T  7678819 cctttttttctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaa 7678891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 9305979 - 9305915
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||  ||||| ||||| |||||| |||| |||| | ||| |||||||||||||||||    
T  9305979 tttttctctctatattgtttttgatcaatgaaaagagagaatatcaaggttgtctcaaaagttgt 9305915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 30578343 - 30578383
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  30578343 tttttctctctccattgtttttgaccaatgataagagagaa 30578383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 37033085 - 37033053
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  37033085 cctttttctctctccattgtttttgaccaatga 37033053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39259039 - 39258991
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaa 49  Q
    |||||||||||||||||||| |||||| ||| |||||| |||| |||||    
T  39259039 cctttttctctctccattgtttttgactaataagaagagagaaaaacaa 39258991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40719628 - 40719560
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtac 69  Q
    |||||||||||||| ||| | |||||||||| | |||| |||| | ||||||||||  |||||||||||    
T  40719628 cctttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagttgtcataaaagttgtac 40719560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2600518 - 2600420
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  2600518 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactctt 2600420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 37970022 - 37970112
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  37970022 tttttctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatggttgttaaaatatcact 37970112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 640481 - 640580
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||  || |||||||||| |||||||||||||||| ||| ||||    
T  640481 tttttctctctcaattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattataccaaaatgattgtcaaaatatcactactcattta 640580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 47379653 - 47379739
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  47379653 tctctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaagttgcaccaaaatagttgtcaaaatatcact 47379739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 41458884 - 41458788
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    ||||||||||||| |||||  ||||| |||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  41458884 cctttttctctcttcattgattttgatcaatgaaaaaagagaacaacaaagttgtctcaaaagttgtaccaaaatgattgtcaaaatatcattgctc 41458788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11070315 - 11070413
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||| ||||| |||||||||||| |||| |||| |||||||||||||||||  || |||||||||| |||||||||||||||| |||||    
T  11070315 cctttttctctctctattgtttttgaccaatgaaaagagagaagaacaaagttgtctcaaagattctaccaaaatgattgtcaaaatatcactactctt 11070413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 44185265 - 44185360
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||  | |||||||||||||||||| |||||  |||||  |||||||||| ||||    
T  44185265 tttttctctctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcactcctct 44185360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38197748 - 38197838
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||  ||||| ||||||||||| |||||  |||||  ||||||||    
T  38197748 cctttttctctctccattgtttttgaccaatgaaaagatagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatca 38197838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 28548213 - 28548124
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgct 96  Q
    |||||||| ||| | ||| |||||| |||||| ||||||| ||||||||||||||  |||||| ||||||||||| ||||||||||||||    
T  28548213 tctctctctattctttttaaccaataagaagagagaacaataaagttgtctcaaagattgtactaaaatggttgttaaaatatcactgct 28548124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25272678 - 25272778
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||||||||||||  ||||||||| |||||| |||| ||||| |||||| |||||||||||| ||||  |||||  ||||| ||||| |||||    
T  25272678 cctttttctctctccattgttattgaccaataagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactgttcttt 25272777  T
Q  101 t 101  Q
    |    
T  25272778 t 25272778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39369389 - 39369485
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||||| ||| |||||| |||| | |||| |||||||||||| | |||||||| |  |||||| ||||||||||||| |||||    
T  39369389 cctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctc 39369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 23034295 - 23034205
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| |||||||||| |||| | || ||||||| |||||| |||||||||||||||||  |||||  ||||||||||    
T  23034295 tttttctctctctattgtttttgaccaataagaaaagagcacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcact 23034205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 384646 - 384735
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||| ||| | ||| ||||||||||||| |||| ||||||||||||||||| |||||| ||||||| || | ||||||||||| ||||    
T  384646 tctctctattttttttaaccaatgagaagagagaataacaaagttgtctcaaaggttgtatcaaaatgatttttaaaatatcactactct 384735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12141971 - 12142062
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| || ||||| |||||||||||| |||| |||| || ||||||||| ||||||||||| | ||||||||||  ||||||||||    
T  12141971 cctttttctctttctattgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatc-aaatggttgttcaaatatcact 12142062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26041397 - 26041493
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    ||||||| |||||||||||| |||||||||| |||||| |||| |||||||||||| | ||||||||   ||||||| |||  |||||||| |||||    
T  26041397 cctttttttctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 27704522 - 27704614
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| | ||||| |||||||||| |||||| |  |||||||||||||| ||||||||||| |||||  |||||  ||||||||||    
T  27704522 cctttttctctcgctattgtttttgaccaataagaagagaacacaacaaagttgtcccaaaagttgtaacaaaagagttgttcaaatatcact 27704614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 33341108 - 33341024
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaa 86  Q
    |||||| ||| || ||||| ||||| |||||||||| || ||||||||||||||||||||  || ||||||||| ||||||||||    
T  33341108 ctttttttctttctattgtttttgatcaatgagaaggtaaaacaacaaagttgtctcaaacattataccaaaatagttgtcaaaa 33341024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 155965 - 155868
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||| ||| |||||||||||| |||  |||| ||  ||||||| ||||||||||| | |||||||||||  |||||||||| |||||    
T  155965 cctttttctctctccactgtttttgaccaatgaaaagtaagaaaaaagaagttgtatcaaaagttgt-ctaaaatggttgttcaaatatcactactctt 155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 36108261 - 36108350
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| |||||| ||||| |||||| || | | ||||| ||||||||||| |||| ||||||||||| ||||| |||||||||||    
T  36108261 tttttctctcttcattgtttttgatcaatgaaaatagataacaataaagttgtctc-aaaggtgtaccaaaatagttgttaaaatatcact 36108350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42431810 - 42431876
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  42431810 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 42431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41910169 - 41910096
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||| ||||| |||||||||| |||||| |  ||||||| ||||||  ||||||||||||||||    
T  41910169 cctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgtaccaaaa 41910096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 33684769 - 33684833
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||| |||||||| ||||||||| ||  |||||||| ||||||||||    
T  33684769 tttttctctctccattgttttttaccaatgaaaagatagaaaaaagaagttgtcacaaaagttgt 33684833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48639369 - 48639277
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||| ||||| ||||||||||  ||||| |  ||||||| |||||  |||||||||||||||||  |||||  ||||||||||    
T  48639369 cctttttctctctctattgtttttgaccaatacgaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcact 48639277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 29923760 - 29923858
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    |||||||||||| ||||| |||||||||| |||| | |  ||||||| |||||| |||||||||||||||||  |||||  |||||||||| ||| ||||    
T  29923760 tttttctctctctattgtttttgaccaataagaaaagaacacaacaaggttgtc-caaaagttgtaccaaaagagttgttcaaatatcactactcattta 29923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 41538569 - 41538640
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||| || ||||| |||||||||| ||||||||  ||||||| |||||| ||||||||||| |||||    
T  41538569 tttttctctttctattgtttttgaccaataagaagataacacaacaaggttgtcccaaaagttgtatcaaaa 41538640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 47945074 - 47945169
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||| ||| | |||||||||| |||||| |  ||||||| |||||| ||||||||||| |||||  |||||  |||||||||| ||||||    
T  47945074 tttctctctctattatttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47945169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 47950504 - 47950599
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||| ||| | |||||||||| |||||| |  ||||||| |||||| ||||||||||| |||||  |||||  |||||||||| ||||||    
T  47950504 tttctctctctattatttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47950599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48522243 - 48522298
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||| ||||| |||||||||| | |||| |||||||||||||||||    
T  48522243 cctttttctctctctattgtttttgaccaataacaagaaagaacaacaaagttgtc 48522298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 49142501 - 49142434
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    ||||||| ||||||||||||  |||||||||||||||| | || ||||| |||||| |||||||||||    
T  49142501 cctttttttctctccattgttattgaccaatgagaagaaaaaataacaaggttgtcacaaaagttgta 49142434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12102693 - 12102627
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| ||  |||||||| ||||||||||    
T  12102693 cctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 12102627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 24380703 - 24380613
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||  ||||| |||||||||| |||||| |  ||||||| |||||  |||||||||||||||||  |||||  ||||||||||    
T  24380703 tttttctctctttattgtttttgaccaataagaagagaacacaacaaggttgttccaaaagttgtaccaaaagagttgttcaaatatcact 24380613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 25887672 - 25887761
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||| |||||||||||| |||  |||| ||  |||||||  |||||||||| | |||||||||||  ||||||||||    
T  25887672 tttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgt-ctaaaatggttgttcaaatatcact 25887761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30864401 - 30864335
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||| | |||| ||||| |||||| | ||||||||    
T  30864401 cctttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgt 30864335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 32747370 - 32747420
Alignment:
Q  52 ttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    |||||||||| ||| ||||||||||||||||||||||||| | ||||||||    
T  32747370 ttgtctcaaaggttataccaaaatggttgtcaaaatatcaatactctttta 32747420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35212941 - 35212887
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||| ||| | ||| ||||||||||||| ||||||||||||||||    
T  35212941 cctttttctctctctattatttttaaccaatgagaagagagaacaacaaagttgt 35212887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38978579 - 38978645
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||| ||| |||||| |||| ||||| |||||| | ||||||||    
T  38978579 cctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgt 38978645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45335949 - 45336023
Alignment:
Q  1 cctttttctctctccattgtcttt-gaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||| ||||| ||| ||||||| | |||| |||||||||| |||||| ||||| |||||||||||    
T  45335949 cctttttctctctctattgttttttgaccaataaaaagagagaacaacaaggttgtcccaaaatttgtaccaaaa 45336023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 10161912 - 10161859
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||||||| | |||| |||| ||||||||||||    
T  10161912 tttttctctctccattgtttttgaccaataaaaagaaagaaaaacaaagttgtc 10161859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22331195 - 22331122
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||||| ||| |||||||| |||| || | ||||| |||||| ||||| ||||| |||||    
T  22331195 cctttttctctctccattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgtagcaaaa 22331122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 44187780 - 44187833
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||||||||| || | ||||||| |||||||||    
T  44187780 tttttctctctccattgtttttgaccaatgaaaaaaaagaacaataaagttgtc 44187833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 2323382 - 2323470
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||| ||||| |||||||||||| |||| |||| || ||| || || |||| |||||    ||||||||||||||||||||    
T  2323382 tttttctctctctattgtttttgaccaatgaaaagaaagaaaaataaaattctcacaaatgttgtcattaaatggttgtcaaaatatca 2323470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5978666 - 5978757
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| |||||||||||| |||| |||| |   |||||||| ||| ||||||| | | ||||||||  ||||||||||    
T  5978666 cctttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagagttgtatc-atatggttgttcaaatatcact 5978757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 7295560 - 7295620
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||| ||||| ||||||||||||||||| |||| ||||| |||||  ||||||||||    
T  7295560 tctctctctattgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgt 7295620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 10014937 - 10014873
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||| | |||| |||| |||||| ||||| | ||||||||    
T  10014937 tttttctctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgt 10014873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33465021 - 33464953
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtac 69  Q
    ||||||||||||||||||||  |||| |||||| |||| | || ||||| |||||| ||||||||||||    
T  33465021 cctttttctctctccattgttattgatcaatgaaaagaaaaaataacaaggttgtcacaaaagttgtac 33464953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 47193014 - 47193105
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| |||||||||||| |||  |||| ||  |||||||  |||||||| | | |||||||||||  ||||||||||    
T  47193014 cctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttat-ctaaaatggttgttcaaatatcact 47193105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 2005818 - 2005912
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||| |||||| ||| |||||| |||||| |||| |||||||||||| |  ||||| | |  |||||| ||||||||||||| ||||||    
T  2005818 tttttctctctgcattgtttttaaccaataagaagagagaaaaacaaagttgtcac-taagttatccttaaatggatgtcaaaatatcattgctct 2005912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27164821 - 27164766
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||| | |||||||| |||||||||| |||||| |||| ||||||||||||    
T  27164821 cctttttctttttccattgtttttgaccaataagaagagagaaaaacaaagttgtc 27164766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 37848602 - 37848531
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||| |||||||||||| |||||||||||| |||| || ||||||| ||| ||  |||||||||| |||||    
T  37848602 tttttttctctccattgtttttgaccaatgaaaagagagcacaacaaggttatcctaaaagttgtagcaaaa 37848531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18157169 - 18157127
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  18157169 cctttttctctctccattgtttttgaccaatgaaaagagagaa 18157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19510341 - 19510275
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||||| |||||| |||| |||| ||  |||||||  ||||||||||    
T  19510341 cctttttctctctccattgtttttgatcaatgaaaagagagaaaaaataagttgttacaaaagttgt 19510275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 25614804 - 25614750
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| ||| |||||| |||||| |||| ||||| ||||||    
T  25614804 ctttttctctctccattgttttttaccaataagaagagagaaaaacaaggttgtc 25614750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33050270 - 33050336
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||| ||||| |||||||||| |||||| |||  ||||| |||||| | ||||||||    
T  33050270 cctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgt 33050336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40693512 - 40693470
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||    
T  40693512 cctttttctctctctattgtttttgaccaatgagaagagagaa 40693470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45607111 - 45607208
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||||| |||||||||||| |||  |||| ||  |||||||  |||||||| | | ||||| |||||  |||||||||| |||||    
T  45607111 cctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttat-ctaaaatagttgttcaaatatcactactctt 45607208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 46651761 - 46651858
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||||||||| |||||||||||| |||| |||| |   |||||||| ||| | ||||| | | ||||||||  |||||||||| |||||||    
T  46651761 tttttctctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagaattgtatc-atatggttgttcaaatatcactactctttt 46651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48866914 - 48866848
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||| ||||| |||| |||| ||  | |||||| ||||||||||    
T  48866914 cctttttctctctccattgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 48866848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5378714 - 5378751
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  5378714 cctttttctctctccattgtttttgaccaatgaaaaga 5378751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6655601 - 6655497
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| ||| |||||||| |||| | || || ||  |||||  |||  ||||||| ||||||||||  |||||||| |||||| |    
T  6655601 cctttttctctctccattgtttttaaccaatgaaaagagataaaaagaagattgtcaaaaagattgtacc-aaatggttgtttaaatatcattgctctat 6655503  T
Q  101 tataat 106  Q
    ||||||    
T  6655502 tataat 6655497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 27688725 - 27688766
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    ||||||||||||||||||| |||||||||||| |||| ||||    
T  27688725 ctttttctctctccattgtttttgaccaatgaaaagagagaa 27688766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31982144 - 31982181
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  31982144 cctttttctctctccattgtttttgaccaatgaaaaga 31982181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 37385216 - 37385151
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||| ||||| |||||||||| |||| | |||| ||||| |||||| | ||||||||    
T  37385216 ctttttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgt 37385151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40108211 - 40108283
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| |||| |  |||||||||||||||| |||| ||||| |||||| | |||||||||| ||||    
T  40108211 cctttttctctcttcattattattgaccaatgagaagaaagaataacaaggttgtcac-aaagttgtactaaaa 40108283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40949886 - 40949849
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  40949886 cctttttctctctgcattgtctttgaccaataagaaga 40949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 44175633 - 44175674
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    ||||||||||||||||||| |||||||||| |||||| ||||    
T  44175633 ctttttctctctccattgtttttgaccaataagaagaaagaa 44175674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 46148253 - 46148290
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  46148253 cctttttctctctccattgtttttgaccaatgaaaaga 46148290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4678150 - 4678182
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  4678150 cctttttctctctccattgtttttgaccaatga 4678182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 7077735 - 7077671
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||| |||||||| |||  || | || ||||||||| ||||||||||    
T  7077735 tttttctctctccattgtttttaaccaatgaaaagtgaggaaaaaaaagttgtcacaaaagttgt 7077671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 8742472 - 8742536
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| | ||| |||| |||||| |||| ||||| |||||| | ||||||||    
T  8742472 tttttctctctccattgtttatgatcaataagaagagagaaaaacaaggttgtcaccaaagttgt 8742536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 27943088 - 27943136
Alignment:
Q  45 aacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||| ||||||||||  ||||||||||||| |||| |||||||||||    
T  27943088 aacaaaattgtctcaaagattgtaccaaaatgattgttaaaatatcact 27943136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 32044868 - 32044964
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||| || |||||| ||| || ||| |||||| |||  |||||| ||||| | |||||||| |  |||||| ||||||||||||| ||||||    
T  32044868 ctttttctcccttcattgtttttaactaataagaagagagataaacaaaattgtcactaaagttgtccttaaatggatgtcaaaatatcattgctct 32044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 37351972 - 37351877
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||| |||||||||| | |||| |||| ||  || ||||| |||||||| || | ||||| ||||  |||||||||| |||||    
T  37351972 tttttctctctccattgtttttgaccaataaaaagagagaaaaaagaaattgtcacaaaagttatatc-aaatgattgttcaaatatcactactctt 37351877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43079616 - 43079584
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  43079616 cctttttctctctccattgtttttgaccaatga 43079584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 43107701 - 43107741
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  43107701 tttttctctctccattgtttttgaccaatgaaaagaaagaa 43107741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 117)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2280264 - 2280364
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  2280264 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcactactcttt 2280363  T
Q  101 t 101  Q
    |    
T  2280364 t 2280364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14847502 - 14847405
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  14847502 cctttttctctttctattgtttttaaccaatgagaagatagaacaacaaagttgtctaaaaggttgtaccaaaatggttgtcaaaatatcactactct 14847405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16295551 - 16295643
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||| ||||| |||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16295551 cctttttctctctctattgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaagttgtaccaaaatagttgtcaaaatatcact 16295643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 29533856 - 29533940
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29533856 tctctcaattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatgattgtcaaaatatcact 29533940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 50025663 - 50025579
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  50025663 tctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtgaaaatatca 50025579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 42643339 - 42643425
Alignment:
Q  16 attgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    ||||| |||||| |||||||||| ||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||||||    
T  42643339 attgtttttgacaaatgagaagagagaacaacaaaattgtctcaaaaattatatcaaaatggttgtcaaaatatcactgctctttta 42643425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47140659 - 47140569
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||| |||||| |||||  ||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47140659 cctttttctctcttcattgtttttgataaatgaaaatagagaacaacaaagttgtctcaaaagttgtaccaaaatggttctcaaaatatca 47140569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 33971971 - 33972060
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||| |||||||||||| |||||  ||||||||    
T  33971971 ctttttctctctccattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatca 33972060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 38471731 - 38471826
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||| ||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||  |||||||||||||||| ||||    
T  38471731 tttttccctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaataattgtcaaaatatcactactct 38471826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 9027702 - 9027799
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||| |||||  |||||||||||||||||| |||||  |||||||| | ||||||    
T  9027702 tttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 9027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 43149326 - 43149237
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||| |||||  |||||||||||||||||| |||||  ||||||||    
T  43149326 ctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatca 43149237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1261359 - 1261267
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| || ||||| ||| ||||||||||||| | |||||||||||||||| |||| ||||| ||| ||||||||||||||||||||    
T  1261359 cctttttctctatctattgtttttaaccaatgagaagagaaaacaacaaagttgtctaaaaaattgtatcaacatggttgtcaaaatatcact 1261267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 9557900 - 9557824
Alignment:
Q  17 ttgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  9557900 ttgtttttaaccaatgagaagagagaacaacaaaattgtctcaaaagttgtaccaaaataattgtcaaaatatcact 9557824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 33074961 - 33075052
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||| |||||| ||| |||||||||| | || | |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  33074961 ctttttctttctccaatgtttttgaccaataaaaaaagagaacaacaaagttgtctcaaaggttgtactaaaatagttgtcaaaatatcact 33075052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 25559793 - 25559886
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgct 96  Q
    |||||||||||| ||||| ||||| ||||||||||| ||||||| ||| |||||||||| |||||| ||||||| || | ||||||||||||||    
T  25559793 tttttctctctctattgtttttgatcaatgagaagagagaacaataaaattgtctcaaaggttgtatcaaaatgattcttaaaatatcactgct 25559886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 36301190 - 36301096
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||| || ||||| ||| ||||||||||||| |||||||||||||| ||||||| ||  |||||||||| |||||||||||||||| |||||    
T  36301190 tttttctctttctattgtttttaaccaatgagaagagagaacaacaaagttatctcaaatgt--taccaaaatgattgtcaaaatatcactactctt 36301096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49361821 - 49361748
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||||||||  |||||||||||||||| |||| |||||||||||| |||||||||||| ||||    
T  49361821 cctttttctctctccattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgtactaaaa 49361748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2935495 - 2935397
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||||||||||||  |||||||||||||||| |||| ||||| |||||| |||||||||||| ||||  |||||  ||||| |||| |||||    
T  2935495 cctttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaagagttgttcaaataacactactctt 2935397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 10565146 - 10565235
Alignment:
Q  8 ctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||| |||||| |||||||||| | || | ||||||| |||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  10565146 ctctcttcattgtttttgaccaataaaaatagagaacaataaagttgtctcaaaggt-gtaccaaaatggttgttaaaatatcactgctct 10565235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 34208356 - 34208446
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| ||| | ||||||||||| |||| |||||||||||||||||| |||||  |||||  ||||||||||||||||    
T  34208356 tttttctctctctattgtttttaatcaatgagaagagagaaaaacaaagttgtctcaaaaattgtattaaaataattgtcaaaatatcact 34208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 48117423 - 48117513
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||||| |||| || ||||||| |||||| ||||||||||| |||||  |||||  ||||||||    
T  48117423 cctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatca 48117513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50879682 - 50879748
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| | ||||||||    
T  50879682 cctttttctctctccattgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgt 50879748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 51385422 - 51385344
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgt 81  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||  |||||| |||||||||||| ||||| |||||    
T  51385422 tttttctctctccattgtttttgaccaatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaatagttgt 51385344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 43900861 - 43900957
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||| | ||| |||||| |||||| |||| |||||||||||| | |||||||| |  |||||| ||||||||||||| |||||||    
T  43900861 tttttctctctccattatttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctctt 43900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28269893 - 28269959
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||  |||||||| ||||||||||    
T  28269893 cctttttctctctccattgtttttgaccaatgaaaagatagaaaaaagaagttgtcgcaaaagttgt 28269959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 9159019 - 9158947
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||| |||||| |||||||||||| |||| || ||||||| |||||| ||||||||||| |||||    
T  9159019 ctttttctctcttcattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 9158947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21481851 - 21481918
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    ||||||||| |||| ||||| ||||||||||||||||| |||||||  | ||||||||||||||||||    
T  21481851 cctttttctgtctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgta 21481918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 29555824 - 29555733
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||||| ||||| |||||| ||| |||||| |  ||||||| |||||| |||||||||||||||||  |||||  ||||||||||    
T  29555824 ctttttctctctctattgtttttgactaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcact 29555733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3958002 - 3957936
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| ||||| |||||| | ||||||||    
T  3958002 cctttttctctctccattgtttttgacaaataagaagatagaaaaacaaggttgtcactaaagttgt 3957936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13159748 - 13159814
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  13159748 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 13159814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14839029 - 14838931
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||| ||||| |||||||||| | |||| |  ||||||| |||||| ||||| |||||||||||  |||||  |||||||||| |||||    
T  14839029 cctttttctctctctattgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactctt 14838931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28263632 - 28263698
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| || ||||||||| | ||||||||    
T  28263632 cctttttctctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgt 28263698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29846875 - 29846785
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| ||| ||||| || |||| || ||||||| |||||| ||||||||||| |||||  |||||  ||||||||    
T  29846875 cctttttctctctccattgttttttaccaacgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatca 29846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32981105 - 32981008
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||||| |||||| |||||||||  |||| || || ||||||  |||| ||||||| ||||||||||  |||||||| |||||||    
T  32981105 cctttttctctctccattgtttttgacaaatgagaagggagaagaagaaggttgtcaaaaaatttgtacc-aaatggttgttcaaatatcattgctctt 32981008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34021447 - 34021381
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||| ||||| |||||||||| |||||| |||| |||||||||||| | ||||||||    
T  34021447 cctttttctctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 34021381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37215215 - 37215149
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||||||||    
T  37215215 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 37215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46473215 - 46473304
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  ||||||||  |||||||||| | ||||||||||  ||||||||    
T  46473215 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatc-aaatggttgttcaaatatca 46473304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 50294104 - 50294011
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||| |||||||| ||||| |||||| |||| |||| || |||||||||  | |||||||||| |||||||||| ||||||||| |||||||    
T  50294104 tttctctttccattgtttttgatcaatgaaaagagagaaaaagaaagttgtcaaataagttgtacc-aaatggttgttaaaatatcattgctctt 50294011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 52454076 - 52454010
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||  |||||||||||| | ||||||||    
T  52454076 cctttttctctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgt 52454010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 27276822 - 27276911
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| ||| | |||| | || | | |||||||| |||||||||||| |||||||||||| |||||  ||||||||    
T  27276822 ctttttctctctccattgtttttaatcaataaaaaaagaaaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatca 27276911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 43220123 - 43220026
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||| |||| ||||  ||||||||||||||| | ||||||||||| ||||| |||||||| ||| ||||  |||||  |||||||||| |||||||    
T  43220123 ttttctatctctattgcttttgaccaatgagaatagagaacaacaaaattgtcccaaaagttatactaaaaaagttgttcaaatatcactactctttt 43220026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 47484367 - 47484432
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||||| |||| || ||||||||||| || ||||| ||||    
T  47484367 ctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaagttatcccaaaaattgt 47484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50745636 - 50745697
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    |||||||||||||||||||| |||||||||||| |||| || ||||||| |||||| |||||    
T  50745636 cctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaa 50745697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 54233484 - 54233419
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  54233484 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 54233419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25959526 - 25959427
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||| |||| |  |||||||||  | | |||||| | ||||||||||  |||||||| ||||||||    
T  25959526 cctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaagttgtcaaataggttgtatc-aaatggttgttcaaatatcattgctcttt 25959428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 35756069 - 35756133
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||| |||||| |||||| |||| |||||||||||| | ||||||||    
T  35756069 tttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgt 35756133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 36819045 - 36819109
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  36819045 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36819109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 45966702 - 45966774
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    |||||||||||| ||||| |||||||||| |||| ||| |||||||||  |||| ||||||||| ||||||||    
T  45966702 tttttctctctctattgtttttgaccaataagaatataaaacaacaaaactgtcccaaaagttgaaccaaaat 45966774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 47683879 - 47683967
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||| | ||| |||||||||| |||||| ||||  | || |||||||||||||||||  ||||||||||||  ||||||||    
T  47683879 tttttctctctctaatgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatca 47683967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 7231984 - 7231894
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||| |||||||||||| |||| |||| ||  || ||||| ||||||||||| | ||||||||||  |||||||||| ||||    
T  7231984 tctctctccattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatc-aaatggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20714330 - 20714385
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| ||||||||||| || || ||||||    
T  20714330 cctttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtc 20714385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 1031401 - 1031339
Alignment:
Q  11 tctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||| |||||||||| |||||| |||| || |||||||||  |||||||||||||||    
T  1031401 tctccattgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgtaccaaa 1031339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1295419 - 1295516
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||| ||||| |||||||||||| ||||||||| || || ||||||  ||  |||||| | ||||||||||  |||||||| |||||||    
T  1295419 cctttttctctctctattgtttttgaccaatgaaaagatagaaaaagaaggttgtcaaaattgttgtagc-aaatggttgttcaaatatcattgctctt 1295516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 25806502 - 25806420
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatat 89  Q
    |||||||| ||||| |||||||||| | || | ||||||||||| |||| | ||| |||||||||||||| |||| |||||||    
T  25806502 tctctctctattgtttttgaccaataaaaaaagagaacaacaaaattgtttaaaaggttgtaccaaaatgattgttaaaatat 25806420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30400140 - 30400074
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||  ||||| | ||||||||    
T  30400140 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 30400074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41877775 - 41877841
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| | || | |||| |||||||||||| | ||||||||    
T  41877775 cctttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgt 41877841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 44689892 - 44689994
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    |||||||||||| ||||| |||||||||| | |||| |  ||||||| |||||| |||||||||| ||||||   ||||  |||||||||| |||||| |    
T  44689892 tttttctctctctattgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgttccaaaagaattgttcaaatatcactactctttaa 44689991  T
Q  103 taa 105  Q
    |||    
T  44689992 taa 44689994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 622443 - 622347
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||| ||||| || |||||||||||||| |||| |  |||||||||   |||||||| |  ||||||||||||| |||||||| ||||    
T  622443 cctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgt-cacaaatggttgtcaatatatcactactct 622347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 884627 - 884716
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||| |||||| ||| | ||||| |||| |||||| | ||||||||| || |||||||| || ||||||||| ||||| |||||||||||    
T  884627 ttttttctctctattatttttgatcaataagaagagaaaacaacaaaattctctcaaaaattataccaaaatagttgttaaaatatcact 884716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 5188326 - 5188395
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||| |||||||||||| ||| |||||||| |||| |||| ||  |||||||| ||||||||||||||||    
T  5188326 ttttttctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtaccaaa 5188395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7294083 - 7293987
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||| ||| |||||||||||| ||   |||| ||  ||||||| ||||||||||| | |||||||||||  |||||||||| ||||    
T  7294083 cctttttctctctccactgtttttgaccaatgaaaaataagaaaaaagaagttgtatcaaaagttgt-ctaaaatggttgttcaaatatcactactct 7293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11173537 - 11173637
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||||  |||||| |||||||||||| |||| |||| ||  |||||||| ||||||||||| | ||||||||||  |||||| | | ||||||    
T  11173537 cctttttctctcaacattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatc-aaatggttgttcaaatattattactcttt 11173635  T
Q  101 ta 102  Q
    ||    
T  11173636 ta 11173637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 32795923 - 32796019
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||||||| |||||||||| | |||| |||| |  |||||||||  | | |||||||| ||||||||||  |||||||| ||||||    
T  32795923 cctttttctctctccattgtttttgaccaataaaaagagagaaaatgaaagttgtcaaataggttgtacc-aaatggttgttcaaatatcattgctct 32796019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 32931901 - 32931836
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||| |||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  32931901 ctttctctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 32931836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 44827041 - 44827130
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| |||| | ||||| |||| || ||||||| ||||||  |||||||||| |||||  |||||  ||||||||    
T  44827041 ctttttctctctccattgtttttggctaatgaaaagacagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatca 44827130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48205132 - 48205205
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| ||||||  |||| ||||||||||| | || ||||| |||||| |||||||||||| ||||    
T  48205132 cctttttctctctacattgttattgatcaatgagaagaaaaaataacaaggttgtcacaaaagttgtactaaaa 48205205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 52383135 - 52383188
Alignment:
Q  50 agttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttttat 103  Q
    |||| |||||||  |||||||||||| ||||||||||||||||| |||||||||    
T  52383135 agttatctcaaagattgtaccaaaatagttgtcaaaatatcactactcttttat 52383188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11327195 - 11327295
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||| ||||| |||||||||| |||||| |||  ||||| |||||| | ||||||||    |||||| |||  |||||||| ||||||||    
T  11327195 cctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctcttt 11327294  T
Q  101 t 101  Q
    |    
T  11327295 t 11327295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 20380871 - 20380776
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||| |||||||||| |||||||||||| |||  |||| ||  |||||||| ||||||||||   |||||||||||  |||||||||| |||||    
T  20380871 tttttctttctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgt-ttaaaatggttgttcaaatatcactactctt 20380776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 23906969 - 23906905
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||| |||||| |||| | ||| |||||| | ||||||||    
T  23906969 tttttctctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgt 23906905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 28884569 - 28884621
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||||||| |||||||||| |||||| |||| | |||||||||    
T  28884569 tttttctctctccattgtttttgaccaataagaagagagaaaatcaaagttgt 28884621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35368698 - 35368770
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||||| ||||| ||| |||||||| |||| || |||||||  ||||| ||||||||||| ||||    
T  35368698 cctttttctctctctattgttttttaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaa 35368770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50280071 - 50279971
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||| ||| |||||| |||| ||||| ||||||   ||||||||    |||||| |||  |||||||| ||||||||    
T  50280071 cctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcattgctcttt 50279972  T
Q  101 t 101  Q
    |    
T  50279971 t 50279971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 52381252 - 52381292
Alignment:
Q  63 gttgtaccaaaatggttgtcaaaatatcactgctcttttat 103  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  52381252 gttgtactaaaatggttgtcaaaatatcactactcttttat 52381292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29057737 - 29057808
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||| ||||||  ||| |||||||| |||| || ||||||| |||||| ||||||||||| |||||    
T  29057737 tttttctctccccattgattttaaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 29057808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33007447 - 33007514
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaaca-aagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| || | |||||||| ||||| ||||    
T  33007447 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgt 33007514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39604230 - 39604175
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  ||||||||    
T  39604230 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtc 39604175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 43894967 - 43894908
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    ||||||||| || ||||| |||||||||||| |||| || |||||||||||||| |||||    
T  43894967 tttttctctatctattgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaa 43894908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48490497 - 48490430
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    ||||||||||| ||||||||  |||||||||||||||| | || |||||  ||||| |||||||||||    
T  48490497 cctttttctctatccattgttattgaccaatgagaagaaaaaataacaagattgtcacaaaagttgta 48490430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1901910 - 1901868
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  1901910 cctttttctctctccattgtttttgaccaatgaaaagagagaa 1901868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1911356 - 1911314
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  1911356 cctttttctctctccattgtttttgaccaatgaaaagagagaa 1911314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 3210606 - 3210560
Alignment:
Q  55 tctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    ||||||| |||||||||||||||| || ||||||||||| |||||||    
T  3210606 tctcaaaggttgtaccaaaatggtagttaaaatatcactactctttt 3210560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8066442 - 8066484
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  8066442 cctttttctctctccattgtttttgaccaatgaaaagagagaa 8066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 28300628 - 28300539
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| |||||||||||| |||| |||| |  ||||||||| ||| ||||||| | | ||||||||  ||||||||||    
T  28300628 tttttctctctctattgtttttgaccaatgaaaagagagaaaataaaagttgtcacaagagttgtatc-atatggttgttcaaatatcact 28300539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 29705992 - 29706062
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    ||||||||| |||||||| ||| |||||||| |||| |||| ||  |||||||| ||||||||||| ||||    
T  29705992 tttttctctatccattgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 29706062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31300889 - 31300979
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||| ||||||| ||||| |||||||||| | || | ||||||||||||||||| ||| | ||||   |||||||||||  ||||||||    
T  31300889 ccttttcctctctctattgtttttgaccaataacaaaaaagaacaacaaagttgtcccaagaattgtcataaaatggttgttcaaatatca 31300979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31326795 - 31326837
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  31326795 cctttttctctctccattgtttttgaccaatgaaaagagagaa 31326837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 32151989 - 32152075
Alignment:
Q  10 ctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgct 96  Q
    ||||| ||||| ||| |||||| |||||| |  ||||||||||||||  |||| |||||||||||  |||||  |||||||||||||    
T  32151989 ctctctattgtttttaaccaataagaagagaacacaacaaagttgtcctaaaaattgtaccaaaaaagttgttcaaatatcactgct 32152075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32656062 - 32656104
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  32656062 cctttttctctctccattgtttttgaccaatgaaaagaaagaa 32656104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35272114 - 35272180
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| | |||| |||| ||  |||||||| || |||||||    
T  35272114 cctttttctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtcacataagttgt 35272180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 36799486 - 36799540
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||||| |||| |||| ||  ||||||||    
T  36799486 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaatgaagttgtc 36799540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37303058 - 37302992
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| ||  || ||||| ||||||||||    
T  37303058 cctttttctctctccattgttttttaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgt 37302992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41717350 - 41717392
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  41717350 cctttttctctctccattgtttttgaccaatgaaaagagagaa 41717392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42475961 - 42475895
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||  |||||||||||| |||| |||| ||  ||||| || ||||||||||    
T  42475961 cctttttctctctccattggttttgaccaatgaaaagagagaaaaaataagttttcacaaaagttgt 42475895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 44593055 - 44593125
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||||||||| |||||||||||| || | |||| |  || ||||||  |||||||||||||||    
T  44593055 tttttctctctccattgtttttgaccaatgaaaatagagaaaatgaaggttgtcaaaaaagttgtaccaaa 44593125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 53102886 - 53102820
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||| |||||||||||| ||||| |||| |||||| |||| ||||| |||||| | ||||||||    
T  53102886 cctttttttctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgt 53102820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 2482657 - 2482604
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    ||||||||||||||||||| ||| |||||| |||||| |||| ||||| |||||    
T  2482657 ctttttctctctccattgtttttaaccaataagaagagagaaaaacaaggttgt 2482604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 9027961 - 9028057
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||||||||||| |||||||||| | || | |||  ||| |||||||| ||||| | ||| | ||||||||||  |||||||||| |||||    
T  9027961 ctttttctctctccattgtttttgaccaataaaaatagagagaaacgaagttgtcacaaaaatcgtatc-aaatggttgttcaaatatcacttctctt 9028057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26279971 - 26280008
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  26279971 cctttttctctctccattgtttttgaccaatgaaaaga 26280008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36869821 - 36869784
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  36869821 cctttttctctctccattgtttttgaccaatgaaaaga 36869784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41877595 - 41877558
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  41877595 cctttttctctctccattgtttttgaccaatgaaaaga 41877558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 51672950 - 51673046
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||||||| |||||||||||| ||   | || ||  |||||||  |||||||||| | |||||||||||  |||||||||| ||||    
T  51672950 cctttttctctctccattgtttttgaccaatgaaaactgaaaaaaaagaagttgtaccaaaagttgt-ctaaaatggttgttcaaatatcactactct 51673046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51921500 - 51921537
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  51921500 cctttttctctctccattgtttttgaccaataagaaga 51921537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 53932374 - 53932309
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||| |||||| |||||| ||| ||||||||||| | ||| |||||| | ||||||||    
T  53932374 ctttttctctcttcattgtttttgactaataagaagatagaaaagcaaggttgtcaccaaagttgt 53932309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 54379395 - 54379448
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||| |||||||||| | |||||||||| |||||| |||| ||||||||||||    
T  54379395 tttttttctctccattatttttgaccaataagaagagagaaaaacaaagttgtc 54379448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 275315 - 275355
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  275315 tttttctctctccattatttttgaccaatgagaagaaagaa 275355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 2009743 - 2009807
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||| | |||||||||| |||||| |||| | ||| |||||| | ||||||||    
T  2009743 tttttctctctccattatttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgt 2009807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3069559 - 3069511
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaa 49  Q
    ||||| |||||||||||||| |||||||||| |||||| |||| |||||    
T  3069559 cctttatctctctccattgtttttgaccaataagaagagagaaaaacaa 3069511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6126541 - 6126644
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt-ctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| ||  |||||||   |||||||||||   ||||||||||  |||||||||| ||||     
T  6126541 cctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtaaccaaaagttgta-tgaaatggttgttcaaatatcactactcta 6126639  T
Q  100 ttata 104  Q
    |||||    
T  6126640 ttata 6126644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30664590 - 30664687
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||  ||||| |||||||||| | |||| |  |||||||| ||||  |||||||||||||||||  ||| |  |||||||||| ||||||    
T  30664590 cctttttctctct--attgtttttgaccaataaaaagagaacacaacaaaattgttccaaaagttgtaccaaaaaagttattcaaatatcactactcttt 30664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 31763928 - 31763984
Alignment:
Q  35 aagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||| ||||||||||| ||||| ||||| |||||||||||| |||||  ||||||||    
T  31763928 aagagagaacaacaaaattgtcccaaaaattgtaccaaaatagttgtttaaatatca 31763984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 41309089 - 41309129
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||| ||| |||||||| |||||||||    
T  41309089 tttttctctctccattgtttttaaccaatgaaaagatagaa 41309129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 44127174 - 44127134
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||| ||| ||||||||||||| ||||    
T  44127174 tttttctctctccattgtttttaaccaatgagaagagagaa 44127134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 44334785 - 44334694
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||| ||||| || |||||||||||||| |||| |  ||| |||||   |||||||| |  ||||||||||||| ||||||||    
T  44334785 cctttttctctctctattgttttggaccaatgagaagagagaaaataaaaattgtcaacaaagttgt-cacaaatggttgtcaatatatcact 44334694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 47276374 - 47276414
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    ||||||| |||||||||| ||||||||||||||||| ||||    
T  47276374 tttttctttctccattgtttttgaccaatgagaagagagaa 47276414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 49457654 - 49457694
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  49457654 tttttctctctccattgtttttgaccaatgaaaagagagaa 49457694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 51410893 - 51410925
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  51410893 cctttttctctctccattgtttttgaccaatga 51410925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 3518272 - 3518362
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3518272 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcact 3518362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10469931 - 10469839
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  10469931 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatgattgtcaaaatatcact 10469839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12613001 - 12612911
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||  ||||||||    
T  12613001 cctttttatctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatca 12612911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 31626058 - 31625968
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||| | ||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  31626058 tttttctctctctattttttttgaccaatgagaagagagaacaataaagttgtcttaaaagttgtactaaaatggttgtcaaaatatcact 31625968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 35358917 - 35358827
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  35358917 tttttctctctctattgtttttgtccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgctaaaatatcact 35358827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5005200 - 5005277
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggt 78  Q
    |||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  5005200 cctttttctctctctattgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgtaccaaaatggt 5005277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 1108091 - 1108188
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt----ctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||||||    |||||| ||||||||||||||||||||||||||||||| ||||||    
T  1108091 tctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactcttt 1108188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 29765920 - 29766015
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||||| ||||||||||||  | | |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||    
T  29765920 tttttctctctccattgtttttgaccaatgaataaagagaacaacaaagttatctcaaaggttgtaccaaaatagttgtcaaaatatcactactct 29766015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43153044 - 43152954
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||  || |||||||||||||| |||||  ||||||||    
T  43153044 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtcctaagagttgtaccaaaatagttgttcaaatatca 43152954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17574208 - 17574108
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||| |||||||| |||||||| |||||||| |||||||||| |||||| |||||||||||||||||| |||||  |||||||| | ||||||    
T  17574208 cctttttctctatccattgtttttgaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 17574109  T
Q  101 t 101  Q
    |    
T  17574108 t 17574108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 8761755 - 8761826
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  8761755 tttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaacatatcact 8761826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 33893675 - 33893773
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||||||| |||||| |||||||||||  ||||   ||||  |||||||| |||||||||    
T  33893675 tttttctctctccattgtttttgacaaatgaaaagatagcacaacaaggttgtcccaaaagttgtagtaaaaaaattgttcaaatatcattgctctttt 33893773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 37821117 - 37821027
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||| ||||| |||||||||| |||||| |  ||||||| |||||| |||||||||||||||||| |||||  |||||||||| |||||    
T  37821117 tctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcactactctt 37821027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 39595361 - 39595450
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||||||||| | ||||||||||  ||||||||    
T  39595361 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatc-aaatggttgttcaaatatca 39595450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4173108 - 4173035
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||||||||  |||||||||||||||| |||| ||||| |||||| |||| ||||||| ||||    
T  4173108 cctttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaggttgtactaaaa 4173035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 8442248 - 8442336
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||| ||||| | ||||||||||||||| ||||||||||| ||||  ||||| || ||||||||| |||||  ||||||||    
T  8442248 tttttctctctctattgtttctgaccaatgagaagagagaacaacaaaattgttccaaaaattataccaaaatagttgttcaaatatca 8442336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30574361 - 30574306
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||    
T  30574361 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 30574306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34381099 - 34381189
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcac 92  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||| |||||||| ||||| || || | ||||||||||  |||||||||    
T  34381099 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaattatatc-aaatggttgttcaaatatcac 34381189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15622131 - 15622197
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  15622131 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 15622197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 9940142 - 9940215
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    ||||||||||||  ||||| |||||||||||| |||| |||||||||||||||||  |||| ||||| ||||||    
T  9940142 ctttttctctcttaattgtttttgaccaatgaaaagagagaacaacaaagttgtcctaaaaattgtatcaaaat 9940215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 33823677 - 33823612
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  33823677 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 33823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 34698890 - 34698954
Alignment:
Q  28 caatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| | |||||||||||||| ||||| |||||||||||||| |||| |||||||||||    
T  34698890 caatgagaagagaaaacaacaaagttgtttcaaa-gttgtaccaaaatgattgttaaaatatcact 34698954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 38919941 - 38920006
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||| ||| | ||||||||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  38919941 tctctctattatttttgaccaatgagaagagagaacaacaaggttgtcctaaaagttgtaccaaaa 38920006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 125179 - 125270
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||| |||||| ||||| |||||||||||| |||| |||| ||  |||||||| ||||||||||| | ||||||||||  ||||||||||    
T  125179 cctttttttctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatc-aaatggttgttcaaatatcact 125270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2863636 - 2863704
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtac 69  Q
    |||||||||||||||||| | |||||||||||| |||| | |||||||| |||||| ||||| ||||||    
T  2863636 cctttttctctctccattatttttgaccaatgaaaagagataacaacaaggttgtcccaaaaattgtac 2863704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19271946 - 19271998
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagtt 53  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||||||    
T  19271946 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 19271998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 28501707 - 28501770
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  28501707 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 28501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 31284377 - 31284283
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    ||||||||||||||||||| ||| |||||||| |||| |||  ||  |||||||| |||||||||||   ||||||||||  ||||||||||||||    
T  31284377 ctttttctctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcgcaaaagttgta-tgaaatggttgttcaaatatcactgctc 31284283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 40201102 - 40201031
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||| |||||| ||||||  |||||||||||||||| |||| ||||| |||||| |||||||||||| ||||    
T  40201102 ttttcctctcttcattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtacaaaaa 40201031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 2051014 - 2051068
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||| |||||| |||| ||||| ||||||    
T  2051014 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaatgttgtc 2051068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4954553 - 4954619
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||||||| || |||||| |||| ||||| |||||| | ||||||||    
T  4954553 cctttttctctctccattgtttttgacccataagaagagagaaaaacaaggttgtcactaaagttgt 4954619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7077323 - 7077257
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| | |||||||||| | |||| |||| |||||||||||| | ||||||||    
T  7077323 cctttttctctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgt 7077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9596798 - 9596732
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||  ||||| | ||||||||    
T  9596798 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 9596732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12512880 - 12512946
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||  ||||| | ||||||||    
T  12512880 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 12512946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12718364 - 12718263
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||| ||||| ||||   |||||||||||  |||||||||| ||| ||    
T  12718364 cctttttctctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgt-tgaaaatggttgttcaaatatcactactcatt 12718266  T
Q  101 tat 103  Q
    |||    
T  12718265 tat 12718263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 14914458 - 14914512
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||| |||||| | || ||||||||||||    
T  14914458 ctttttctctctccattgtttttgaccaataagaagagataaaaacaaagttgtc 14914512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19376116 - 19376050
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| || |||||||    
T  19376116 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgt 19376050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 33567218 - 33567125
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||||||| |||||||||||| |||| |||| ||  || ||||| ||||||||||| | ||||||||||  | |||||||| ||||||    
T  33567218 ttctctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatc-aaatggttgttcatatatcactactcttt 33567125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41192674 - 41192728
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||||||||| |||||||||| | |||| |||| |||||||||||    
T  41192674 cctttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaagttgt 41192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42364516 - 42364582
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||  ||||| |||||||||||| ||||||  ||||||| |||||| ||||||||||    
T  42364516 cctttttctctctatattgtttttgaccaatgaaaagataacacaacaaggttgtcccaaaagttgt 42364582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 3263491 - 3263426
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||| | |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  3263491 ctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 3263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 5043018 - 5043075
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagt 64  Q
    ||||||||  |||| ||||||||||||||||| |||||||||| |||||| |||||||    
T  5043018 tctctctctgttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagt 5043075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 6458855 - 6458944
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| |||||||||| | |||| || ||||||| |||||| ||||| || || |||||  |||||  ||||||||    
T  6458855 ctttttctctctccattgtttttgaccaattaaaagagagcacaacaaggttgtcccaaaaattatagcaaaaaagttgttcaaatatca 6458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 8959248 - 8959313
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| | |||| |||| ||||| |||||| | ||||||||    
T  8959248 ctttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgt 8959313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9957185 - 9957112
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||||||||  ||||||||| |||||| |||| || || |||||| ||||| |||||| ||||    
T  9957185 cctttttctctctccattgttattgaccaattagaagaaagaataataaggttgtcacaaaaattgtactaaaa 9957112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14522948 - 14522875
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||| |||||||||||| |||||||||| | ||||||| |||| ||  ||||| ||||||||||| |||||    
T  14522948 cctttttttctctccattgtttttgaccaataaaaagatagcacaataagattgtcccaaaagttgtagcaaaa 14522875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15639472 - 15639568
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||||||||||||  || ||||||||||||  |||| || || ||||||  ||| |||||||| ||||||||||  |||||||| ||||||    
T  15639472 cctttttctctctccattgttcttcaccaatgagaagggagaagaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctct 15639568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 22920474 - 22920421
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||||||| |||||| |||| ||||| ||||||    
T  22920474 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtc 22920421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 24792540 - 24792639
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||| |||| |  || ||||||  | | |||||||| ||||||||||  |||||||| ||||||||    
T  24792540 cctttttctctctccattgt-tttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtacc-aaatggttgttcaaatatcattgctcttt 24792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9636142 - 9636047
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||||| |||||||||||| |||| |||| |  || ||||||  | | |||||||| ||||||||||  |||||||| |||||    
T  9636142 cctttttctctctccattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtacc-aaatggttgttcaaatatcattgctc 9636047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10522862 - 10522926
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagtt 65  Q
    |||||||||||||||||| | |||||||||| |||||| |||| ||||| |||||| | ||||||    
T  10522862 cctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagtt 10522926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 11464105 - 11464041
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||| | |||| |||| ||||| |||||| | ||||||||    
T  11464105 tttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgt 11464041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 17489437 - 17489501
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||| |||||| |||| |||||  ||||| | ||||||||    
T  17489437 tttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgt 17489501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19127211 - 19127310
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| || ||||||||| ||   |||| ||  |||||||| ||||||||||   |||||||||||  |||||||||| ||||||    
T  19127211 cctttttctctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcgcaaaagttgt-ttaaaatggttgttcaaatatcactactcttt 19127309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25585440 - 25585360
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgt 81  Q
    |||||||||||||  ||||| ||||| |||| | ||||||  ||||||||||| || ||||||||||| |||||| |||||    
T  25585440 cctttttctctctatattgtttttgatcaataaaaagataacacaacaaagttctcccaaaagttgtaacaaaatagttgt 25585360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 27392684 - 27392620
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||||| |||| | || ||  |||||||| ||||||||||    
T  27392684 tttttctctctccattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgt 27392620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 28811517 - 28811581
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||||| |||| |||| ||  | |||||| ||||||||||    
T  28811517 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 28811581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 2117619 - 2117525
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    ||||||||||||||| ||| |||||||| || | |||| ||  |||||||| ||||||||||| | |||| |||||  |||||||||| |||||||    
T  2117619 ttctctctccattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatc-aaatagttgttcaaatatcactactctttt 2117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 3849588 - 3849658
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||| | |||||| ||| | |||||| ||||||| ||||||| |||||||||||||||||| |||||    
T  3849588 tttttctcttttcattgttttt-atcaatgaaaagatagcacaacaaggttgtctcaaaagttgtagcaaaa 3849658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 11666267 - 11666330
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagtt 65  Q
    ||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||  ||||||||    
T  11666267 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgttacaaaagtt 11666330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11880971 - 11880916
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| || || ||||||    
T  11880971 cctttttctctttccattgtttttgaccaatgagaagagagaaaaagaaggttgtc 11880916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 33243724 - 33243618
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    ||||||||||||||||||| ||| |||||||| |||| |||| ||  || ||||| |||||||| | |  ||||||||||  |||||||| | |||||||    
T  33243724 ctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataaattgtcacaaaagttat-ctgaaatggttgttcaaatatcattactctttt 33243626  T
Q  102 ataattgt 109  Q
    ||| ||||    
T  33243625 atacttgt 33243618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38010959 - 38011014
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| |||||| | || |||||| |||||    
T  38010959 cctttttctctctccattgtttttgaccaataagaagagaaaaaaacaaaattgtc 38011014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3031921 - 3031975
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||| |||||||| |||||| |||||||||||| ||||||| ||||||| |||||    
T  3031921 ccttcttctctcttcattgtttttgaccaatgaaaagatagcacaacaaggttgt 3031975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 6865770 - 6865716
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||||| |||| |||| |  |||||||||    
T  6865770 ctttttctctctccattgtttttgaccaatgaaaagagagaaaataaaagttgtc 6865716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 12203235 - 12203305
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||| |||||| ||||  ||| ||||||||||||| || |||||||  ||||| |||||||||||||||||    
T  12203235 ttttttctctctattggttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgtaccaaaa 12203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12779590 - 12779524
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||| ||||| ||||    
T  12779590 cctttttctctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgt 12779524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 20040877 - 20040915
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  20040877 tttctctctccattgtttttgaccaatgagaagagagaa 20040915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 26626801 - 26626704
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||||||||| |||||||||| | || | |||| || || ||||||   ||||||||| | ||||||||||  |||||||| |||||||||    
T  26626801 tttttctctctccattgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgtaac-aaatggttgttcaaatatcattgctctttt 26626704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 39458733 - 39458795
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    ||||||||||||||| |||||||||||| |||| | || || ||||||||| ||||| |||||    
T  39458733 ttctctctccattgtttttgaccaatgaaaagagataaaaaaaaagttgtcacaaaaattgta 39458795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42909806 - 42909864
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctca 59  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||||||    
T  42909806 cctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtctca 42909864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 471902 - 471959
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctca 59  Q
    ||||||||||||||||||| ||||| |||||| |||| |||| ||  |||||||||||    
T  471902 ctttttctctctccattgtttttgatcaatgaaaagagagaaaaaagaagttgtctca 471959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 4292872 - 4292925
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||| |||| |||||||||| |||| | |||| ||||||||||||    
T  4292872 tttttctctctccgttgtttttgaccaataagaatagagaaaaacaaagttgtc 4292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5130362 - 5130301
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| ||  |||||||| |||||    
T  5130362 cctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaa 5130301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 9594566 - 9594631
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| |||||| |||  || || |||||| | ||||||||    
T  9594566 ctttttctctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgt 9594631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9714120 - 9714028
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatg-agaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| ||||||||||| | ||||||||| |   |||||||| ||| ||||||| | | ||||||||  ||||||||||    
T  9714120 cctttttctctctccattgtttttgaccaatgaaaaagatagaaaatagaagttgtcacaagagttgtatc-atatggttgttcaaatatcact 9714028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 11306791 - 11306879
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||| ||||| ||| |||||||| |||| |||| ||  |||||||||||||||||||| | |||| |||||  |||||||||| ||||    
T  11306791 tctctctattgtttttaaccaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatc-aaatagttgttcaaatatcactactct 11306879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12891080 - 12891019
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    ||||||||||| |||||||| ||||| |||||| |||| || ||||||| |||||| |||||    
T  12891080 cctttttctctttccattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaa 12891019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 13734342 - 13734289
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||||||||| |||| |||| |  |||||||||    
T  13734342 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtc 13734289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 20719998 - 20719933
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||| | |||||||||||| |||| |||  ||  |||||||| ||||||||||    
T  20719998 ctttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgt 20719933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 35595968 - 35595903
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    |||||||||||||||||| |||||||||||| || | || |||||||  ||||| ||||| |||||    
T  35595968 tttttctctctccattgtttttgaccaatgaaaaaagagcacaacaagattgtcccaaaaattgta 35595903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 36786241 - 36786176
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||| ||||| ||||||||||   |||| |||| | |||||||||| ||||||||||    
T  36786241 ctttttctctctctattgtttttgaccaatagaaagagagaaaagcaaagttgtcacaaaagttgt 36786176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 5386159 - 5386223
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||| ||| | ||||| |||| | |||| ||||||||||||||||| ||| ||||||    
T  5386159 tttttctctctctattatttttgaacaataacaagaaagaacaacaaagttgtcccaagagttgt 5386223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 12417715 - 12417779
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||| |||||  |||||| ||||  ||||||||||| | ||||||||    
T  12417715 tttttctctctccattgtttttaaccaaaaagaagagagaaacacaaagttgtcaccaaagttgt 12417779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24431602 - 24431511
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||| ||| ||| |||||||| |||| |||| ||  |||||||| ||| |||||| |  ||||||||||  ||||||||||    
T  24431602 cctttttctctctccaatgtgtttaaccaatgaaaagagagaaaaatgaagttgtcacaatagttgt-ctcaaatggttgttcaaatatcact 24431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 34428250 - 34428286
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaaga 38  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  34428250 ctttttctctctccattgtttttgaccaatgataaga 34428286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 40566199 - 40566159
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  40566199 tttttctctctccattgtttttgaccaatgaaaagagagaa 40566159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 46903557 - 46903657
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  46903557 cctttttctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 46903656  T
Q  101 t 101  Q
    |    
T  46903657 t 46903657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 27787578 - 27787668
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27787578 tttttctctctctattgtttttgacaaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaactatcact 27787668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31666189 - 31666089
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||    
T  31666189 cctttttatctctctattgt-tttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatggttgtcaaaatattactactcttt 31666091  T
Q  101 ta 102  Q
    ||    
T  31666090 ta 31666089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37741936 - 37741839
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||| ||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  37741936 cctttttccctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaaattgtatcaaaatggttgtcaaaatatcactactct 37741839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2827694 - 2827602
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||| ||||| |||||||||| |||||| ||||||||||| |||||||||| ||||||||||||||||| |||||||||||||    
T  2827694 cctttttctctctctattgtttttgaccaataagaagagagaacaacaaaattgtctcaaaggttgtaccaaaatggttatcaaaatatcact 2827602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 644789 - 644880
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||| ||||| |||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  644789 tctctctctattgtttttgactaatgagaagagagaacaataaagttgtctcaaatgttgtaccaaaatggttgtcaaaatatcactactct 644880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6396414 - 6396506
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| || ||||| ||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  6396414 cctttttctctttctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatgattgtcaaaacatcact 6396506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24158737 - 24158835
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||  ||||| ||| |||||| |||||| |||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||||    
T  24158737 cctttttctctctttattgttttttaccaataagaagacagaacaacaaagttgtctcaaaggttgttcctaaatggttgtcaaaatatcactactctt 24158835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 28457329 - 28457239
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| |||||| |||||||||||| || | ||||||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  28457329 tttttctctcttcattgtttttgaccaatgaaaatagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcact 28457239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37947204 - 37947114
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||| |||||| |||||  ||||||||    
T  37947204 cctttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatca 37947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 31244717 - 31244620
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  |||||| |||| ||||||||||||| |||||  |||||||| ||||||||    
T  31244717 tttttctctctccattgtttttgaccaatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaatagttgttcaaatatcattgctcttt 31244620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 8577484 - 8577388
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||| |||||| |||||||| ||||||||| |||||  |||||||| |||||||    
T  8577484 tttttctctctccattgtttttgaccaatgagaatagagaacaacaaggttgtcccaaaagttataccaaaatagttgttcaaatatcattgctctt 8577388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 21446200 - 21446110
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||| | || ||||| ||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21446200 tttttctttttctattgtttttaaccaatgagaagagagatcaacaaagttgtctcaaaggttgtaccaaaatggttatcaaaatatcact 21446110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 40052996 - 40053091
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||| |||||| ||| | |||||||||||| |||| ||||||||||||||||||||||  |||||||||||| ||||| ||||||||||| |||||    
T  40052996 ttttttctctctattatttttgaccaatgaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgttaaaatatcactactctt 40053091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 43757688 - 43757771
Alignment:
Q  16 attgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||| ||| |||||||| |||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||| |||||    
T  43757688 attgtttttaaccaatgaaaagagagaacaacaaagttgtctcaaaaattataccaaaatagttgtcaaaatatcactactctt 43757771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 49615238 - 49615167
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||||||| | ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  49615238 tttgaccaatgagaaaagagaacaataaagttgtctcaaagattgtaccaaaatggttgtcaaaatatcact 49615167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 19920852 - 19920949
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||| |||||| |||||||||| |||||| |||| |||||||||||| | |||||||| |  |||||| ||||||||||||| |||||||||    
T  19920852 ttttctctcttcattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctctttt 19920949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51436415 - 51436342
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    |||||||| ||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  51436415 cctttttccctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaag-tgtaccaaaat 51436342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40240095 - 40240022
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||| |||||||| |||||||||||| ||||||| ||||||| |||||| ||||||||||| |||||    
T  40240095 cctttttctctatccattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaagttgtagcaaaa 40240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11038349 - 11038440
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||||| |||||| |||||| |||||||||| |||||||||||      || || ||||||||||||||||||| ||||||||||| ||||    
T  11038349 cctttttctctcttcattgtttttgacaaatgagaagagagaacaacaaa------tcgaaggttgtaccaaaatggttgttaaaatatcactactct 11038440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 44714329 - 44714418
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaa--caaagttgtctcaaaagttgtaccaaaatggttgtcaaaatat 89  Q
    |||| |||||||| ||||| |||||||||| | |||| |||||||  ||||||||||||||| |||||||||||||| |||| |||||||    
T  44714329 ctttatctctctctattgtttttgaccaataaaaagagagaacaaaacaaagttgtctcaaaggttgtaccaaaatgattgttaaaatat 44714418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 43105194 - 43105266
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    |||||||||||||||| | |||||||||| | |||| ||||||| ||||||||| ||||| ||||||||||||    
T  43105194 tttttctctctccattatttttgaccaataaaaagagagaacaataaagttgtcccaaaaattgtaccaaaat 43105266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 26760651 - 26760722
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||| |||||||||| | |||| || ||||||| ||||||||||||||| || |||||    
T  26760651 tttttctctctccattgtttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttataacaaaa 26760722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29362676 - 29362621
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||    
T  29362676 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 29362621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 30596801 - 30596896
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgct 96  Q
    ||||||||||  || || || |||||||||||| |||| ||||||| |||||||||||||| ||||||||||||| | |||  |||||||| ||||    
T  30596801 cctttttctcattctatagtttttgaccaatgaaaagaaagaacaataaagttgtctcaaaggttgtaccaaaatagctgttcaaatatcagtgct 30596896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41564864 - 41564765
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||  ||||| |||||||||| |||||| |  ||||||| |||||| ||||| |||||||||||  |||||  |||||||||| ||||||    
T  41564864 cctttttctctctgtattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatcactactcttt 41564765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13813645 - 13813711
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  13813645 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 13813711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23399973 - 23399871
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||| || ||||| |||||||||| |||||| |  ||||||| |||||| ||||| |||||||||||  |||||  |||||||||| |||| |    
T  23399973 cctttttctctttctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgtttaaatatcactactctat 23399874  T
Q  101 tat 103  Q
    |||    
T  23399873 tat 23399871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39010901 - 39010967
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||||||||    
T  39010901 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 39010967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 48325309 - 48325407
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||  | ||||||    |||||||    |||||||||| |||||||||||||||||    
T  48325309 cctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatggttgttaaaatatcactgctctt 48325407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 48962073 - 48962163
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||| ||||| |||||||||| |||||| |  ||||||| |||||| ||||| |||||||||||  |||||  ||||||||    
T  48962073 cctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtaccaaaagagttgttcaaatatca 48962163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 27352717 - 27352817
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||| |||| |  || ||||||  | | |||||||| ||||||||||  |||||||| ||||||||    
T  27352717 cctttttctctctccattgtttttgaccaatgaaaagagagaaaagaaaggttgtcgaataggttgtacc-aaatggttgttcaaatatcattgctcttt 27352815  T
Q  101 ta 102  Q
    ||    
T  27352816 ta 27352817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30414951 - 30415024
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||| ||||| |||||||||| |||||| |  |||||||  ||||| |||||||||||||||||    
T  30414951 cctttttctctctctattgtttttgaccaataagaagagaacacaacaagattgtcccaaaagttgtaccaaaa 30415024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 30631829 - 30631733
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||||||| |||||||||||| |||  |||| ||  |||||||  |||||||||| | |||||||||||  |||||||||| ||||    
T  30631829 cctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgt-ctaaaatggttgttcaaatatcactactct 30631733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 48336434 - 48336349
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||| |||||||||| |||||  |||||| ||| ||||||  |||||||||| |||||| |||||  ||||||||    
T  48336434 ttctctctccattgtgtttgaccaataagaagggagaacatcaaggttgtccaaaaagttgtaacaaaatagttgttcaaatatca 48336349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7371932 - 7371880
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagtt 53  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||||||    
T  7371932 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 7371880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 8312273 - 8312329
Alignment:
Q  42 aacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||||| | ||| || |||||||||||||||||||||||| ||||    
T  8312273 aacaacaaagttgtctcagaggttatatcaaaatggttgtcaaaatatcactactct 8312329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11121568 - 11121663
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    ||||||||| |||| ||||| ||| ||||||||||||| | ||||||||  ||||| |||||||| ||||||||| |||||  |||||||| |||||    
T  11121568 cctttttctttctctattgt-tttaaccaatgagaagagacaacaacaagattgtcacaaaagttataccaaaatagttgttcaaatatcattgctc 11121663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 21255768 - 21255672
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||  | ||||||  |||||||||    ||||||||||  |||||||| ||||||    
T  21255768 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctct 21255672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 27895744 - 27895649
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||| | ||| |||||| |||||| |||| |||||||||||| | |||||||| |  |||||  ||||||||||||| |||||    
T  27895744 cctttttctctctccatttt-tttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatgaatgtcaaaatatcattgctc 27895649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 29489341 - 29489277
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  29489341 tttttctctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgt 29489277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 29638802 - 29638894
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||| ||||| ||||| |||||||||| |||||| |  |||||||| ||||| ||||| |||||||||||  |||||  ||||||||||    
T  29638802 cctttttccctctctattgtttttgaccaataagaagagaacacaacaaaattgtcccaaaaattgtaccaaaagagttgttcaaatatcact 29638894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 48028615 - 48028667
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    ||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  48028615 tttttatctctccattgtttttaaccaatgagaagagagaacaacaaagttgt 48028667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 1100306 - 1100377
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||| |||||| |||||  |||||||||||||||| |||| ||||| |||||| |||||||||||| ||||    
T  1100306 tttttttctctcaattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgtactaaaa 1100377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 5477146 - 5477075
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    ||||||||||||||||||| |||||||||| | |||| |||| ||  |||||||| ||||||||||| ||||    
T  5477146 ctttttctctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 5477075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27954315 - 27954369
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    ||||||||||| |  ||||| ||||||||||||||||| ||||||||||||||||    
T  27954315 cctttttctctttatattgtttttgaccaatgagaagagagaacaacaaagttgt 27954369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33422203 - 33422106
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||| ||||| || |||||||||||||| |||| |  |||||||||   |||||||| |  ||||||||||||| |||||||| |||||    
T  33422203 cctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgt-cacaaatggttgtcaatatatcactactctt 33422106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36669354 - 36669288
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| | |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  36669354 cctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36669288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40610316 - 40610382
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||| ||||||||||    
T  40610316 cctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgt 40610382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 42843327 - 42843273
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||| |||||| |||| ||||| ||||||    
T  42843327 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtc 42843273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43196073 - 43196007
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| | |||| |||||| ||||||| || | ||||||||    
T  43196073 cctttttctctctccattgtttttgaccaatcaaaagagagaacatcaaagttatcaccaaagttgt 43196007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44112541 - 44112638
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||| ||||| || |||||||||||||| |||| |  |||||||||   |||||||| |  ||||||||||||| |||||||| |||||    
T  44112541 cctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgt-cacaaatggttgtcaatatatcactactctt 44112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4618731 - 4618804
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||| |||||||||| | |||||||||||| || | |||||||||| ||| || |||||||| ||||||||    
T  4618731 cctttttttctctccattatttttgaccaatgaaaaaagagaacaacaaggttatcccaaaagttataccaaaa 4618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 18959093 - 18959189
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaa-caacaaagttgtctcaaaagttgtaccaaaatggttg-tcaaaatatcactgctctt 99  Q
    ||||||||||||||||| |||||||||||| |||| ||||  || ||| ||||| ||||| ||||| | ||||||||| ||||||||||||| |||||    
T  18959093 ttttctctctccattgtttttgaccaatgaaaagagagaagaaaaaaaattgtcgcaaaaattgtatc-aaatggttgttcaaaatatcactactctt 18959189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 26501384 - 26501437
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||||||| |||||| |||| ||||| ||||||    
T  26501384 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtc 26501437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 835959 - 836031
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| ||| |  |||||||||||||||| | || |||||  ||||| |||||||||||||||||    
T  835959 ctttttctctctctattattattgaccaatgagaagagaaaataacaagattgtcccaaaagttgtaccaaaa 836031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4604616 - 4604688
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||||||||||| |||||||||||| |||| |||| || || ||||||  | | |||||||||||    
T  4604616 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaacaggttgtaccaaa 4604688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 30687141 - 30687236
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||| ||| | ||||||||||  |||| || || ||||||  |||| ||||||| ||||||||||  |||||||| |||||||    
T  30687141 tttttctctctccattgtttttaaacaatgagaagggagaagaagaaggttgtcaaaaaatttgtacc-aaatggttgttcaaatatcattgctctt 30687236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35846303 - 35846224
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgt 81  Q
    |||||||||||||||||||| |||||||||||| |||  |||| ||  |||||||  |||||||||| | |||||||||||    
T  35846303 cctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgt-ctaaaatggttgt 35846224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 36930732 - 36930641
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||| |||||||||| | |||| |||| || || ||||||  ||| |||||| ||||||||||||  |||||||| |||||||||    
T  36930732 tctctccattgtttttgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttgta-caaaatggttgttcaaatatcattgctctttt 36930641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 46948068 - 46948132
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||||| ||||||||  ||  |||||||| ||| ||||||    
T  46948068 tttttctctctccattgtttttgaccaatgaaaagatagagaaaagaagttgtcacaagagttgt 46948132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2257678 - 2257623
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| | |||| || | ||||||||||||    
T  2257678 cctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtc 2257623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 9011733 - 9011780
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaa 49  Q
    ||||||||||||||||||| |||||||||| |||||| |||| |||||    
T  9011733 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaa 9011780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 21263147 - 21263202
Alignment:
Q  38 atagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| |||||||||||| |||||| ||||| |||||  ||||||||||    
T  21263147 atagaacaacaaggttgtctcaaaaattgtacaaaaatagttgttcaaatatcact 21263202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50528041 - 50527986
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||||| |||| |||| || || ||||||    
T  50528041 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtc 50527986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 366748 - 366810
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||| |||||||||||| |||| || | || ||||||||| || |||||||    
T  366748 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtcacataagttgt 366810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16836098 - 16836032
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||| |||||||||||| |||||||||||| |||  |||| ||  |||||||| ||||||||||    
T  16836098 cctttttttctctccattgtttttgaccaatgaaaagtaagaaaaaagaagttgtcacaaaagttgt 16836032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25098772 - 25098730
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  25098772 cctttttctctctccattgtttttgaccaatgaaaagagagaa 25098730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28253102 - 28253168
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||  ||||||||||    
T  28253102 cctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgttacaaaagttgt 28253168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 30530556 - 30530486
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||||||||| |||||||||||| |||| |||| |  |||||||||  | | |||||||||||    
T  30530556 tttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataggttgtaccaaa 30530486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31290192 - 31290126
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||| |||||||| || | |||| ||  |||||||| ||||||||||    
T  31290192 cctttttctctctccattgtttttaaccaatgaaaaaagagaaaaaataagttgtcacaaaagttgt 31290126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 34941902 - 34941808
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||| |||||||||| |||||| |||  ||  ||||||||  ||||||||||   |||||||| | |||||| || |||||    
T  34941902 tttttctctctccattgtttttgaccaataagaagagagagaaatgaagttgtcataaaagttgtaaacaaatggttcttaaaataccattgctc 34941808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40596038 - 40595996
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  40596038 cctttttctctctccattgtttttgaccaatgaaaagagagaa 40595996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 41885809 - 41885875
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    ||||||||||||||||||| |||||||||| |||| | |||| || || ||||||  ||||||||||    
T  41885809 ctttttctctctccattgtttttgaccaatcagaatagagaaaaagaaggttgtcaaaaaagttgta 41885875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43612066 - 43612024
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  43612066 cctttttctctctccattgtttttgaccaatgaaaagagagaa 43612024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43640971 - 43640929
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  43640971 cctttttctctctccattgtttttgaccaatgaaaagagagaa 43640929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47059874 - 47059832
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  47059874 cctttttctctctccattgtttttgaccaatgaaaagagagaa 47059832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48872466 - 48872508
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  48872466 cctttttctctctccattgtttttgaccaatgaaaagagagaa 48872508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50659176 - 50659110
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||| || |||||||    
T  50659176 cctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgt 50659110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 51339684 - 51339642
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  51339684 cctttttctctctccattgtttttgaccaatgaaaagagagaa 51339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 5959481 - 5959530
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||| |||||||||| |||||| |||| | ||||||||||    
T  5959481 tctctctccattgtttttgaccaataagaagagagaaaatcaaagttgtc 5959530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 6841880 - 6841933
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||||||| | |||| |||| || |||||||||    
T  6841880 tttttctctctccattgtttttgaccaataaaaagagagaaaaagaaagttgtc 6841933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 16987535 - 16987576
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    ||||||||||||||||||| |||||||||||| |||| ||||    
T  16987535 ctttttctctctccattgtttttgaccaatgaaaagagagaa 16987576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22389509 - 22389444
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttg 66  Q
    ||||||||| |||||||| | |||||||||||| |||| |||| ||  |||||||| |||||||||    
T  22389509 cctttttctttctccattatttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg 22389444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 27578270 - 27578323
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    ||||||||||||||||||| |||||||||| |||| | |||| ||||| |||||    
T  27578270 ctttttctctctccattgtttttgaccaataagaatagagaaaaacaaggttgt 27578323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31436907 - 31436944
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  31436907 cctttttctctctccattgtttttgaccaatgaaaaga 31436944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 32966355 - 32966420
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| | |||| |||| ||  | |||||| ||||||||||    
T  32966355 ctttttctctctccattgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgt 32966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 44730731 - 44730827
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||||||| |||| ||| |||||||| || | |||| || || ||||||  ||| |||||||| ||||||||||  |||||||| ||||||    
T  44730731 cctttttctctctcctttgtttttaaccaatgaaaaaagagaaaaagaaggttgtcaaaaaggttgtacc-aaatggttgttcaaatatcattgctct 44730827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 49189194 - 49189129
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| | |||| || | |||||| ||||| | ||||||||    
T  49189194 ctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgt 49189129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50460696 - 50460623
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||| ||||| |||||||||| | |||| |  |||||||| ||||| ||||| ||||| |||||    
T  50460696 cctttttctctctctattgtttttgaccaataaaaagaaaacacaacaaaattgtcccaaaaattgtagcaaaa 50460623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 36690554 - 36690490
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||||| || | |||  ||  |||||||| ||||||||||    
T  36690554 tttttctctctccattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgt 36690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 36706655 - 36706591
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||||| || | |||  ||  |||||||| ||||||||||    
T  36706655 tttttctctctccattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgt 36706591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 36794704 - 36794756
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||| ||||| ||||||||| || |||| |||| |||||||||||    
T  36794704 tttttctctctctattgtttttgaccaacgaaaagagagaataacaaagttgt 36794756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45740528 - 45740496
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  45740528 cctttttctctctccattgtttttgaccaatga 45740496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 98)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 38724299 - 38724197
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    |||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||    
T  38724299 tttttctctctccattgtttttgaccaatgaatagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactcttata 38724200  T
Q  103 taa 105  Q
    |||    
T  38724199 taa 38724197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 34373097 - 34373193
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  34373097 tttttttctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttataccaaaatggttgtcaaaatatcactactctt 34373193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 43026025 - 43026115
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  43026025 tttttctctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgattgtcaaaatatcact 43026115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 40721860 - 40721957
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||| |  ||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  40721860 tttttctctttttattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactcttt 40721957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 13850165 - 13850073
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgct 96  Q
    ||||||||||||||| | |||||||||||| |||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  13850165 ttttctctctccattatttttgaccaatgaaaagagagaacaacaaaattgtctcaaaagttataccaaaatagttgtcaaaatatcactgct 13850073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25094439 - 25094539
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||| |||||| ||||| |||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||    
T  25094439 cctttttatctctctattgtttttgaccaattagaagagagaacaacaaagttgtctcaaagattgtactaaaatggttgtcaaaatatcaccgctcttt 25094538  T
Q  101 t 101  Q
    |    
T  25094539 t 25094539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 304974 - 304876
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||| ||||| |||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||| ||||||||||  |||||||    
T  304974 tttttctctctcaattgtttttgaccaatgagaagagtgaacaacaaagttgtctcaaaggttgtatcaaaatggttgttaaaatatcacaactctttt 304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4858200 - 4858305
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||| ||| ||||| |||||||||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||||| || |||    
T  4858200 cctttttctccctctattgtttttgaccaatgaaaagagagaacaacaaaattgtctcaaaggttgtaccaaaatgattgtcaaaatatcactacttttt 4858299  T
Q  101 tataat 106  Q
    | ||||    
T  4858300 tttaat 4858305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 1151622 - 1151708
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||| ||||| |||||||||||| || | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  1151622 tctctctctattgtttttgaccaatgaaaaaagagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcact 1151708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 27329091 - 27329001
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||| ||||| ||| | ||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  27329091 tttttccctctctattatttttgaccaatgagaaaagagaacaacaaagttgtctcaaaagatgtaccaaaattgttgttaaaatatcact 27329001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 8757632 - 8757721
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||| |||||  |||||||||||||||||| |||||  ||||||||    
T  8757632 ctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatca 8757721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 9377721 - 9377652
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  9377721 tttgaccaataagaagagagaacaacaaagttgtctcaaaggttataccaaaatggttgttaaaatatca 9377652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 30340080 - 30340173
Alignment:
Q  1 cctttttctctctccattgtcttt-gaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||| ||||| ||| |||||||||||||| |||||||||| |||||| |||||||||||||||||  |||||  ||||||||||    
T  30340080 cctttttctctctctattgttttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcact 30340173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 35518368 - 35518452
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||| ||||| |||||||||| |||||| ||||||||||||||||| ||||||||||| |||||| |||||  ||||||||    
T  35518368 tctctctctattgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatca 35518452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 24727523 - 24727586
Alignment:
Q  35 aagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  24727523 aagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactct 24727586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 11728103 - 11728013
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||  ||||| |||||||||||| |||| | |||||||||||||||| |||  ||||||||||||| |||| |||||||||||    
T  11728103 tttttctctctatattgtttttgaccaatgaaaagagaaaacaacaaagttgtcttaaagattgtaccaaaatgattgttaaaatatcact 11728013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43205180 - 43205253
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| |||||| |||||||||||| |||| || |||||||||||||| ||||||||||| |||||    
T  43205180 cctttttctctcttcattgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaagttgtagcaaaa 43205253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 23141462 - 23141542
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||||||  |||||  |||||||||| ||| ||||    
T  23141462 tttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactccttta 23141542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 23553252 - 23553332
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||||||||  |||||  |||||||||| ||| ||||    
T  23553252 tttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactccttta 23553332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13711148 - 13711246
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| ||  |||||||| ||||||||||| |||||| |||||  |||||||||| ||||||    
T  13711148 cctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgta-caaaatagttgttcaaatatcactactcttt 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 37827748 - 37827673
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||| |||| |||||||||||||||||| |||  ||||||||||||  |||| |||||||||||||||    
T  37827748 tttgaccaatgaaaagagagaacaacaaagttgtcttaaagattgtaccaaaataattgttaaaatatcactgctc 37827673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19523385 - 19523295
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||| | |||| ||||||| ||| ||||  ||||| |||||||||||| |||||  ||||||||    
T  19523385 cctttttctctctccattgtttttgaccaataaaaagagagaacaataaaattgtaccaaaaattgtaccaaaatagttgtttaaatatca 19523295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 33857306 - 33857400
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||| |||||||||| |||||| |||| || ||||||||| | |||||||| |  |||| | ||||||||||||| |||||    
T  33857306 tttttctctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattgctc 33857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 34141532 - 34141622
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| |||||||||| |||||| |  |||||||||||||  |||||||||||||||||  |||||  ||||||||||    
T  34141532 tttttctctctctattgtttttgaccaataagaagagaacacaacaaagttgttccaaaagttgtaccaaaagagttgttcaaatatcact 34141622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35705901 - 35705811
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||||| |||| || |||||||  ||||| ||||||||||| |||||  |||||  ||||||||    
T  35705901 cctttttctctctccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatca 35705811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44484640 - 44484574
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||||||||| | ||||||||    
T  44484640 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 44484574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 45202116 - 45202026
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| ||||| |||||| |||| || ||||||| |||||| ||||||||||| |||||  |||||  ||||||||    
T  45202116 cctttttctctctccattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatca 45202026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13881182 - 13881255
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||| ||||||||||| |||||||||||| |||| || |||| ||||||||| ||||||||||| |||||    
T  13881182 cctttttcactctccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaa 13881255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14021307 - 14021380
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||| ||||||||||| |||||||||||| |||| || |||| ||||||||| ||||||||||| |||||    
T  14021307 cctttttcactctccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgtagcaaaa 14021380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35203733 - 35203660
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| |||||| |||||||||||| ||||||| ||||||| |||||| ||||| ||||| |||||    
T  35203733 cctttttctctcttcattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaaattgtagcaaaa 35203660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41156987 - 41156914
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||||  |||||||||||| |||| || |||||||| ||||| ||||||||||| |||||    
T  41156987 cctttttctctctccattgcttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgtagcaaaa 41156914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 11828802 - 11828714
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||| |||||||||||| |||| || ||||||| ||||||  |||||||||| |||||  |||||  ||||||||    
T  11828802 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatca 11828714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 24491660 - 24491561
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||| || ||||| ||| |||||| |||||| ||||||| ||  ||||||||||||||||| |||||   ||||  ||||||||||||||||||    
T  24491660 ctttttctctttctattgtttttaaccaataagaagagagaacaataagattgtctcaaaagttgtatcaaaagaattgttcaaatatcactgctctttt 24491561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43725292 - 43725390
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||  |||| ||  |||||||  |||||||||| | |||||||||||  ||||||||| |||||||    
T  43725292 cctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgt-ctaaaatggttgttcaaatatcaccgctcttt 43725390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 12256990 - 12257080
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| |||||||||| |||||| |  ||||||| |||||| ||||| |||||||||||  |||||  ||||||||||    
T  12256990 tttttctctctctattgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgtaccaaaaaagttgttcaaatatcact 12257080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23048067 - 23048001
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  23048067 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 23048001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 35008083 - 35007985
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    ||||||||| |||||||| |||||||||||| |||| || ||||||| |||||| |||||||||||  ||||  |||||  |||||||| | |||||||    
T  35008083 tttttctctatccattgtgtttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactctttt 35007985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36383549 - 36383615
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  36383549 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 36909826 - 36909772
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||    
T  36909826 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 36909772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17999831 - 17999904
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| |||||| |||||||||||| ||||||  ||||||| |||||| |||||||| || |||||    
T  17999831 cctttttctctctgcattgtttttgaccaatgaaaagatatcacaacaaggttgtcccaaaagttatagcaaaa 17999904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 38027599 - 38027502
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||| ||||| |||||||||| |||||| |  ||||||| ||||| ||||||||| ||| ||||  |||||  |||||||||| ||||    
T  38027599 cctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtttcaaaagttatactaaaagagttgtttaaatatcactactct 38027502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3091828 - 3091900
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    ||||||| |||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||||||||| ||||    
T  3091828 cctttttttctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 3091900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11229305 - 11229214
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| |||||||||||| |||  |||| ||  |||||||  |||||||||| | |||||||||||  ||||||||||    
T  11229305 cctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgt-ctaaaatggttgttcaaatatcact 11229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 27538911 - 27538843
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||| |||||||||||| |||| || ||||||| |||||| | ||||||||| |||||    
T  27538911 ttctctctccattgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaaa 27538843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 38572032 - 38572092
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  38572032 tctctctccattgtctttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 38572092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 5962726 - 5962777
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagtt 53  Q
    ||||||||||||||||||| |||||||||| |||||| |||| |||||||||    
T  5962726 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 5962777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 9384464 - 9384563
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    ||||||||||||||||||  |||||||||| ||||| |||| |||||  ||||| |||||||||||  ||||  |||||  ||||| |||| ||||||||    
T  9384464 tttttctctctccattgttattgaccaatgcgaagaaagaataacaagattgtcacaaaagttgtattaaaagagttgttcaaataacactactctttta 9384563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19631475 - 19631530
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||||    
T  19631475 cctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtc 19631530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19828376 - 19828431
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||||    
T  19828376 cctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtc 19828431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 33569694 - 33569753
Alignment:
Q  40 agaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||| ||||||||||||||||||||||||||||||  |||||  ||||| ||||||||||    
T  33569694 agaataacaaagttgtctcaaaagttgtaccaaaagagttgttcaaataacactgctctt 33569753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 37076742 - 37076813
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||| ||||||||||||  |||||||||||||||| |||| ||||| |||||| ||||| |||||| ||||    
T  37076742 tttttttctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaaattgtactaaaa 37076813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 37631350 - 37631255
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||  | ||||||  |||||||||    ||||||||||  |||||||| |||||    
T  37631350 ctttttctctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 37631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 37966446 - 37966509
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  37966446 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 37966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 11164358 - 11164288
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||||||||| ||| |||||||| |||| |||| ||  |||||||| ||||||||||| ||||    
T  11164358 tttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa 11164288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13104566 - 13104632
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||| ||||    
T  13104566 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgt 13104632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32750085 - 32750151
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||| ||||    
T  32750085 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgt 32750151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 546369 - 546273
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||| ||||| || |||||||||||||| |||| |  |||||||||   |||||||| |  ||||||||||||| |||||||| ||||    
T  546369 cctttttctctctctattgttttggaccaatgagaagagagaaaataaaagttgtcaacaaagttgt-cacaaatggttgtcaatatatcactactct 546273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12208529 - 12208602
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||||||||  ||||||||||| || | |||| |||||| ||||  |||||||||||| ||||    
T  12208529 cctttttctctctccattgttattgaccaatgaaaaaaaagaataacaaaattgttacaaaagttgtactaaaa 12208602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 21805769 - 21805673
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||||| ||||  ||||||||||| ||||| |||| || || ||||||  |||  ||||||| |||||||||| ||||||||| |||||||    
T  21805769 ctttttctctctctattgcttttgaccaatgggaagagagaataagaaggttgtcaaaaagattgtacc-aaatggttgttaaaatatcattgctctt 21805673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 6884999 - 6885063
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||| |||||||||| |||||| ||| |||||| |||| |||||||||||| | ||||||||    
T  6884999 tttttctatctccattgtttttgactaataagaagagagaaaaacaaagttgtcactaaagttgt 6885063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 16463381 - 16463449
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtacca 71  Q
    ||||| |||||| ||||| |||||||||| |||||| || |||||||  ||||| ||||||||||||||    
T  16463381 tttttttctctctattgtttttgaccaataagaagagagcacaacaagattgtcccaaaagttgtacca 16463449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 27529622 - 27529686
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||| |||||||||||| |||| || ||||||| |||||| | ||||||||| ||||    
T  27529622 tctctccattgtttttgaccaatgaaaagaaagcacaacaaggttgtcccgaaagttgtagcaaa 27529686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 29871337 - 29871273
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||| |||||| |||||| |||  |||||||||||| | ||||||||    
T  29871337 tttttctctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaagttgt 29871273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 37064166 - 37064218
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||||| | |||||||| ||| || |||||||||||||||||    
T  37064166 tttgaccaatgagaagagaaaacaacaaggttatcccaaaagttgtaccaaaa 37064218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3959983 - 3960078
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgct 96  Q
    |||||||||||||||||||| ||||| |||||| |||| |||| ||  || |||||  ||||||||| |  ||||||||||  |||||||| ||||    
T  3959983 cctttttctctctccattgtttttgatcaatgaaaagagagaaaaatgaaattgtcataaaagttgttcgcaaatggttgttcaaatatcattgct 3960078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 4263848 - 4263813
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaa 36  Q
    |||||||||||||||||||| |||||||||||||||    
T  4263848 cctttttctctctccattgtttttgaccaatgagaa 4263813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10550443 - 10550388
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| | || | |||| ||||||||||||    
T  10550443 cctttttctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtc 10550388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19913871 - 19913926
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| || |||||||||    
T  19913871 cctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtc 19913926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29893697 - 29893752
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| ||||| |||| |||||| |||| |||||| |||||    
T  29893697 cctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtc 29893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30413716 - 30413661
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| | |||| |||| | ||||||||||    
T  30413716 cctttttctctctccattgtttttgaccaatcaaaagagagaaaagcaaagttgtc 30413661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 32755775 - 32755862
Alignment:
Q  11 tctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||| ||||| |||||||||| | |||| |||| || || | |||||||||||||||  ||||||||||||  |||||||||| ||||    
T  32755775 tctctattgtttttgaccaatcaaaagagagaaaaataaggctgtctcaaaagttgtcacaaaatggttgtagaaatatcactactct 32755862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 38598331 - 38598260
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||| ||||| |||||||||| |||||| |  ||||||| |||||| |||||||| ||| ||||    
T  38598331 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcacaaaagttatactaaaa 38598260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3196071 - 3196017
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||||||| | |||||||||| |||||| |||| ||||| |||||    
T  3196071 cctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgt 3196017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5167726 - 5167684
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||||| |||| ||||    
T  5167726 cctttttctctctccattgtttttgaccaatgaaaagagagaa 5167684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 6328756 - 6328849
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    ||||||||| || ||| | ||| || |||||||||| | ||||| ||| || || |||| ||| |||||||||| ||||||||||||||||||||    
T  6328756 tttttctctttctattatttttaacaaatgagaagagataacaataaa-ttatcccaaaggttataccaaaatgattgtcaaaatatcactgctc 6328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34144535 - 34144470
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||  ||||| | ||||||||    
T  34144535 cctttttctctctccattgt-tttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 34144470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42251904 - 42251807
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||| |||||||  |||||||||||| |||| |||| ||  |||||||| || ||||||| || ||||| ||||  |||||||||| |||||    
T  42251904 cctttttctctttccattgattttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgttcc-aaatgattgtttaaatatcactactctt 42251807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 43560067 - 43559989
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgt 81  Q
    ||||||||| || ||||| ||||| ||||| || || |||||||||| |||||   ||||||||||||||||| |||||    
T  43560067 tttttctctttctattgtttttgatcaatgcgaggagagaacaacaaggttgttcaaaaagttgtaccaaaatagttgt 43559989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3366126 - 3366191
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||  |||||||||||||||| |||| || || |||||| |||||||| ||| ||||    
T  3366126 tctctccattgttattgaccaatgagaagaaagaataataaggttgtcacaaaagttatactaaaa 3366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6851641 - 6851588
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||| ||||| |||||||||| | |||| |||| ||||||||||||    
T  6851641 tttttctctctcaattgtttttgaccaatcaaaagagagaaaaacaaagttgtc 6851588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 7497974 - 7497878
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||||||||||| ||||| ||  ||||||||||||| |||| |  |||||||||   |||||||| |  ||||||||||||| |||||||| |||||    
T  7497974 ctttttctctctctattgttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgt-cacaaatggttgtcaatatatcactactctt 7497878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 10466170 - 10466117
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||| |||||| ||| |||| | |||| ||||||||||||    
T  10466170 tttttctctctccattgtttttgactaataagaaaagagaaaaacaaagttgtc 10466117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 23358562 - 23358521
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||| |||||||||||| ||||||||||||||||| ||||    
T  23358562 ctttttttctctccattgtttttgaccaatgagaagagagaa 23358521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32688528 - 32688491
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  32688528 cctttttctctctccattgtttttgaccaatgaaaaga 32688491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 38533166 - 38533109
Alignment:
Q  17 ttgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||| |||||||||||| || | |||||||||| |||||| ||||| |||||||||||    
T  38533166 ttgtttttgaccaatgacaatagagaacaacaaggttgtcccaaaaattgtaccaaaa 38533109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38777978 - 38778051
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||||| ||| ||| |||| | || || ||||||| |||||| |||||||| || |||||    
T  38777978 cctttttctctctccattgttttttacccatgaaatgagagcacaacaaggttgtcccaaaagttatagcaaaa 38778051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5067625 - 5067593
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  5067625 cctttttctctctccattgtttttgaccaatga 5067593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10688028 - 10688076
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaa 49  Q
    |||||||||||||||||||| |||||| ||| |||||| |||| |||||    
T  10688028 cctttttctctctccattgtttttgactaataagaagagagaaaaacaa 10688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 12358402 - 12358466
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||| |||||| |||||||||| | ||||||||| | ||| |||||| | ||||||||    
T  12358402 tttttctctcttcattgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgt 12358466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 20247850 - 20247778
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||||||| |||||||||| |||||  |||||| |||  |||||  ||||||| || |||||    
T  20247850 ctttttctctctccattgtgtttgaccaataagaaggaagaacatcaagattgtccaaaaagttttaacaaaa 20247778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 22390241 - 22390305
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||||| |||| |||  ||  |||||||| ||| ||||||    
T  22390241 tttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgt 22390305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23391149 - 23391213
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagtt 65  Q
    ||||||||| |||||||| | ||||| |||| |||||| |||| |||||||||||| | ||||||    
T  23391149 cctttttctttctccattatttttgatcaataagaagagagaaaaacaaagttgtcgctaaagtt 23391213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 25801793 - 25801753
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  25801793 tttttctctctccattgtttttgaccaatgaaaagagagaa 25801753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 27307223 - 27307163
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||| |||||||||| |||||| |||| || || |||||| | ||||||||    
T  27307223 tctctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgt 27307163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30856894 - 30856966
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    ||||||||||| |||||||| |||||||||||| |||| |||| || || ||||||  | || ||||||||||    
T  30856894 cctttttctctatccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaataaattgtaccaaa 30856966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30973975 - 30973923
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagtt 53  Q
    |||||||||||||||||||| |||||||||| | |||  |||| |||||||||    
T  30973975 cctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaagtt 30973923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 35798297 - 35798357
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    ||||||||||||||||||| ||| |||||| | |||| || ||||||| |||||| |||||    
T  35798297 ctttttctctctccattgtttttaaccaataaaaagaaagcacaacaaggttgtcccaaaa 35798357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38021443 - 38021507
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagtt 65  Q
    |||||||||||||||||||| |||||||||| | |||| |||  |||||| ||||| | ||||||    
T  38021443 cctttttctctctccattgtttttgaccaatcaaaagagagagaaacaaaattgtcaccaaagtt 38021507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 1987697 - 1987605
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  1987697 cctttttctctctccattgtttttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgattgtcaaaatatcact 1987605  T

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Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 46309106 - 46309004
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    ||||||||||||| ||||| |||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |    
T  46309106 ctttttctctctctattgtttttgaccaatgaaaagagagaactacaaagttgtctcaaaggttgtaccaaaatggttgtcaaaatatcactactcttat 46309007  T
Q  102 ata 104  Q
    |||    
T  46309006 ata 46309004  T

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Target: chr4; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34538017 - 34538109
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  34538017 cctttttctctctctattgtgtttgaccattgaaaagatagaacaacaaagttgtctcaaaggttgtaccaaaatagttgtcaaaatatcact 34538109  T

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Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 9827968 - 9827877
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  9827968 ctttttctctctccattgtttttgaccaatgagaagagataacaacaaagttgtctcaaaggttataccaaaatgattgtcaaaatatcact 9827877  T

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Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4949218 - 4949128
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||| || ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4949218 cctttttctctttctattgtttttaaccaatgagaagaaagaacaacaaagttgtctcaaaagttgtaccaaaatggttatcaaaatatca 4949128  T

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Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43982984 - 43983080
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||| |  |||||  |||||||||||||||||||||||  |||||||| |||||    
T  43982984 cctttttctctctccattgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaatatcattgctc 43983080  T

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Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 46799845 - 46799940
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||| |||||| ||||| ||||||||||||| ||||  |||||||| |||||||    
T  46799845 tttttctctctccattgt-tttgaccaatgagaatagagaacaacaaggttgtcccaaaaattgtaccaaaatgattgttcaaatatcattgctctt 46799940  T

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Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 30250280 - 30250185
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||| || ||||| |||||||||| | |||| |||||||||||||||||||||| |||||||||||||| || | ||||||||||| ||||    
T  30250280 tttttctctttctattgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgatttttaaaatatcactactct 30250185  T

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Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45678350 - 45678440
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||| | |||| |||||||||| |||||  |||||||||||||||||| |||||  ||||||||    
T  45678350 cctttttctctctccattgtttttgaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatca 45678440  T

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Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 4878054 - 4878153
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||| |||||||| |||||||||||| |||| || ||||||| |||||| ||||||||||| |||||  |||||  |||||||| ||||||||    
T  4878054 cctttttctctttccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctcttt 4878153  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 26442370 - 26442280
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||| | |||||| || | ||||  |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  26442370 tttttctctctctattttttttgacgaacgggaagggagaacaacaaagttgtctcaaaggttgtaccaaaattgttgttaaaatatcact 26442280  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 36947074 - 36946984
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||||| ||||| |||| | |||| ||||||||||| || |||||||| || || ||||||||||||||||||||||||    
T  36947074 tttttctctctctattgtttttgatcaataaaaagagagaacaacaaaattatctcaaaaattatatcaaaatggttgtcaaaatatcact 36946984  T

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Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 46686322 - 46686413
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttta 102  Q
    |||||||||||||||||| |||||||||||| ||        ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  46686322 tttttctctctccattgtttttgaccaatgaaaa--------aacaaagttgtatcaaaggttgtaccaaaatggttgtcaaaatatcactactcattta 46686413  T

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Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 50291369 - 50291468
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||| ||||| |||||||||| |||||| |  ||||||| |||||| |||||||||||||||||  |||||  ||||| |||| ||||||    
T  50291369 cctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaataacactactcttt 50291468  T

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Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8026748 - 8026682
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||||||||| | ||||||||    
T  8026748 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 8026682  T

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Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 29577418 - 29577352
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtac 69  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||| |||||| ||||| ||||||    
T  29577418 tttttctctctccattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgtac 29577352  T

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Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 29863643 - 29863737
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||||| | ||| |||||| |||||  ||| |||||| |||||||||||||||||||||||||  ||||  |||||||| ||||||||    
T  29863643 ttctctctccattatttttaaccaataagaagggagagcaacaatgttgtctcaaaagttgtaccaaaataattgttcaaatatcattgctcttt 29863737  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33776981 - 33777071
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||| |||||| |||||||||| | |||| |||||||||| ||| || ||||| |||||||||||| |||||  ||||||||    
T  33776981 cctttttctctcttcattgtttttgaccaataaaaagagagaacaacaaggttatcccaaaaattgtaccaaaatagttgttcaaatatca 33777071  T

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Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46791975 - 46791878
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||||||| ||||| ||||| ||||||| ||| |||||||  | |||||||||||||||||| |||||  |||||  |||||||||| ||||    
T  46791975 cctttttctctctctattgtttttgatcaatgagtagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcactcctct 46791878  T

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Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47998681 - 47998779
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||| |||| || |||||| || ||||||||||| | ||||| ||||  |||||||||| ||||||    
T  47998681 cctttttctctctccattgtttttgaccaatgaaaagaaagaa-aaaaaagttatcacaaaagttgtatc-aaatgattgttcaaatatcactactcttt 47998778  T

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Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 51389404 - 51389499
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||||||||||| ||| || ||||| |||| |||| ||  |||||||| ||||||||||| | ||||||||||  |||||||||||||||    
T  51389404 ctttttctctctccattgttttttactaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatc-aaatggttgttcaaatatcactgctct 51389499  T

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Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19807402 - 19807307
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgct 96  Q
    |||||||||||||| ||||| ||||| |||| ||||||||  ||||||| |||||| ||||| |||||| ||||  |||||  |||||||||||||    
T  19807402 cctttttctctctctattgtttttgatcaataagaagatatcacaacaaggttgtcccaaaaattgtacaaaaaaagttgttcaaatatcactgct 19807307  T

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Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 21766635 - 21766730
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    ||||||||||||| ||||| ||| |||||| |||||| |  ||||||| |||||| |||||||| ||||||||  |||||  ||||||||||||||    
T  21766635 ctttttctctctctattgtttttaaccaataagaagagaacacaacaaggttgtcccaaaagttataccaaaagagttgttcaaatatcactgctc 21766730  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31318835 - 31318926
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcac 92  Q
    |||||||| ||||| ||||| ||| ||||||||||||| |||| || ||| |||||| ||| |||||||||| ||  |||||||||||||||    
T  31318835 cctttttcactctctattgtttttaaccaatgagaagagagaagaataaaattgtcttaaaggttgtaccaatataattgtcaaaatatcac 31318926  T

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Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41495100 - 41495155
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||    
T  41495100 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 41495155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5208311 - 5208245
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  5208311 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 5208245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27001393 - 27001327
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  27001393 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 27001327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 37732051 - 37732133
Alignment:
Q  16 attgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||| |||||||||| | |||| ||||||| |||||||| |||||  ||||||| |||||||||| ||||||||||| ||||    
T  37732051 attgtttttgaccaataaaaagagagaacaataaagttgtttcaaagattgtaccgaaatggttgttaaaatatcactactct 37732133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48650240 - 48650186
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||||| |||||    
T  48650240 cctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgt 48650186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51377277 - 51377211
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  51377277 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 51377211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 45418150 - 45418241
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaaca--acaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| |||||| |||||||||||| || | ||||||  | ||||||||||| |||| |||||||||||||| || |||||||||||    
T  45418150 tttttctctcttcattgtttttgaccaatgaaaatagagaacaatataaagttgtctc-aaaggtgtaccaaaatggtcgttaaaatatcact 45418241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 46844223 - 46844114
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc-tttt 101  Q
    |||||||||||||||||| ||| |||||| | |||| |||| |||||||||||| | |||||||| |  |||| | ||||||||||||| | ||| ||||    
T  46844223 tttttctctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattactcatttt 46844124  T
Q  102 ataattgtat 111  Q
    | ||||||||    
T  46844123 aaaattgtat 46844114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 47105999 - 47106064
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  47105999 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 47106064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 53781819 - 53781754
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgta 68  Q
    |||||||||||||||||| |||||||||||| |||| || | ||||| |||||| |||||||||||    
T  53781819 tttttctctctccattgtttttgaccaatgaaaagagagcataacaaggttgtcccaaaagttgta 53781754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9162153 - 9162225
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  |||||||| ||||| ||||| ||||    
T  9162153 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtatcaaa 9162225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 31275234 - 31275329
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||| ||||||||||||| |||||||||||| |||| |||| ||  || ||||| ||||||||||| | ||||||||||  |||||||||| ||||    
T  31275234 cttttcctctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatc-aaatggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 36728604 - 36728540
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||| |||||| |||||| |||| |||||||||||| | ||||||||    
T  36728604 tttttctctctccattgttttttaccaataagaagagagaaaaacaaagttgtcaccaaagttgt 36728540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 46355274 - 46355202
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| |||||  |||||||||||||| | |||| | |||||||||| |||||||||||| ||||    
T  46355274 ctttttctctctctattgttattgaccaatgagaaaagagaataccaaagttgtcccaaaagttgtacaaaaa 46355202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 49424804 - 49424708
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||||| ||| |||||| |||| | |||| |||||||||||| | |||| ||| |  |||||  ||||||||||||| |||||    
T  49424804 cctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagctgtccttaaatgaatgtcaaaatatcattgctc 49424708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 54801470 - 54801410
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaa 62  Q
    ||||||||||||| ||| |  |||||||||||||||| |||| ||||||||||||||||||    
T  54801470 ctttttctctctctattattattgaccaatgagaagagagaataacaaagttgtctcaaaa 54801410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 8487724 - 8487795
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||| |||||||||| | |||||||||| | |||| || ||||||| |||||||||||||||||| |||||    
T  8487724 tttttttctctccattatttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttgtagcaaaa 8487795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 13267461 - 13267410
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagtt 53  Q
    ||||||||||||||||||| |||||||||| |||||| |||| |||||||||    
T  13267461 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 13267410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18874908 - 18874809
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||  | ||||||  |||||||||    ||||| ||||  |||||||| ||||||||    
T  18874908 cctttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctcttt 18874809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 28899199 - 28899132
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtac 69  Q
    ||||||||||||||||||| |||||||||| | |||| |||||| ||| |||||| ||||| ||||||    
T  28899199 ctttttctctctccattgtgtttgaccaataaaaagaaagaacatcaaggttgtcccaaaaattgtac 28899132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 54803306 - 54803255
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaa 60  Q
    |||||||||| | |||||||||||| |||| |||||||||||||||||||||    
T  54803306 tctctccattttttttgaccaatgaaaagagagaacaacaaagttgtctcaa 54803255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3475955 - 3476045
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||| ||||||| ||||| |||||||||||| |||| |||| || || |||||| |||| |||||    ||||||||||||||||||||    
T  3475955 ccttttactctctctattgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgtcatcaaatggttgtcaaaatatca 3476045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4896484 - 4896418
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||  | |||||| ||||||||||    
T  4896484 cctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 4896418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 5234453 - 5234364
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||| |||||||||||| |||||||||| | |||| |||| || ||| ||||| ||||||||||| | ||||||||||  ||||||||||    
T  5234453 tttttttctctccattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatc-aaatggttgttcaaatatcact 5234364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 6093583 - 6093497
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||| || ||||| ||||||| || | |||| ||||||||||| ||||||||||  || ||||||||| ||||| |||||||||||    
T  6093583 tctctttctattgtttttgaccgataaaaagagagaacaacaaaattgtctcaaagattataccaaaatagttgttaaaatatcact 6093497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7037468 - 7037402
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||  |||| ||||| |||||| | ||||||||    
T  7037468 cctttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgt 7037402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31413770 - 31413680
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||| | |||||||||| | |||| || ||||||| |||||| ||||| ||||| |||||  |||||  ||||||||    
T  31413770 cctttttctctctccattatttttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgtagcaaaaaagttgttcaaatatca 31413680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 31658007 - 31658104
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||||||||||| |||||||||||| |||  |||| ||  |||||||| |||||| |||| | ||||||||||  ||||||| || ||||||    
T  31658007 ctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatc-aaatggttgttcaaatatcgctactcttt 31658104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34027983 - 34028025
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  34027983 cctttttctctctccattgtttttgaccaatgagaagagagaa 34028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 46567017 - 46567114
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||||||||||| |||||||||||| |||| |||| |  || ||||||  | | |||||||| ||||||||||  |||||||| ||||||||    
T  46567017 ctttttctctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtacc-aaatggttgttcaaatatcattgctcttt 46567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53292237 - 53292291
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||||||||| ||| |||||| | ||||||||||||||| |||||    
T  53292237 cctttttctctctccattgtttttaaccaataaaaagatagaacaacaaggttgt 53292291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 56025343 - 56025409
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| | |||| |||| | |||||||||| | ||||||||    
T  56025343 cctttttctctctccattgtttttgaccaatcaaaagagagaaaatcaaagttgtcaccaaagttgt 56025409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 15638218 - 15638283
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||||||| |||| ||||| |||||| |||| ||||| |||||| | ||||||||    
T  15638218 ctttttctctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgt 15638283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 18568798 - 18568733
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||| |||||| |||||||||| ||||||||||| | ||| |||||| | ||||||||    
T  18568798 ctttttctctcttcattgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgt 18568733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 22893956 - 22894045
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||| |||||||||||||| |||||||||| | |||| || |||||||  ||||| ||||||||||| |||||  |||||  ||||||||    
T  22893956 ctttgtctctctccattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatca 22894045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 22945624 - 22945713
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||| |||||||||||||| |||||||||| | |||| || |||||||  ||||| ||||||||||| |||||  |||||  ||||||||    
T  22945624 ctttgtctctctccattgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatca 22945713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 35037718 - 35037767
Alignment:
Q  50 agttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  35037718 agttgtctcaaaggttgtactaaaatgattgtcaaaatatcactactctt 35037767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 55960828 - 55960885
Alignment:
Q  42 aacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||| |||||||||||  ||||| |||||||||||| ||||||||||| |||||    
T  55960828 aacaacaacgttgtctcaaagattgtatcaaaatggttgttaaaatatcactactctt 55960885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3223076 - 3223140
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagtt 65  Q
    |||||||||||||||||||| |||||||||| |||||| |||| || || |||||| | ||||||    
T  3223076 cctttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagtt 3223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 28676130 - 28676043
Alignment:
Q  9 tctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||| |||||||||||| |||| |||| || || ||||||  ||| |||||| ||||||||||||  |||||||| |||||    
T  28676130 tctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttgta-caaaatggttgtttaaatatcattgctc 28676043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31221500 - 31221548
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaa 49  Q
    |||||||||||||||||||| |||||||||| |||||| |||| |||||    
T  31221500 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaa 31221548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41170859 - 41170939
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgt 81  Q
    |||||||||||||| ||||| |||||||||||| | || |||| | ||| |||||| ||||||||||   |||||||||||    
T  41170859 cctttttctctctctattgtttttgaccaatgaaatgaaagaatagcaaggttgtcccaaaagttgtctaaaaatggttgt 41170939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42915203 - 42915104
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    ||||||||||| || ||||| ||| |||||||| |||| |||| ||  |||||||| ||||||||||| | |||| |||||  |||||||||| ||||||    
T  42915203 cctttttctctttctattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatc-aaatagttgttcaaatatcactactcttt 42915105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 925046 - 924991
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| ||||| |||| | ||||||||| ||||| ||||||    
T  925046 cctttttctctctccattgtttttgatcaataaaaagatagaaaaacaaggttgtc 924991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1796452 - 1796503
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagt 52  Q
    |||||||||||||||||| | |||||||||| |||||| |||| ||||||||    
T  1796452 cctttttctctctccattatttttgaccaataagaagagagaaaaacaaagt 1796503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 2193792 - 2193745
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaa 49  Q
    ||||||||||||||||||| |||||||||| |||||| |||| |||||    
T  2193792 ctttttctctctccattgtttttgaccaataagaagagagaaaaacaa 2193745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 24310503 - 24310432
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||| |||||| ||| | || | || ||||||| |||||| ||||||||||| |||||    
T  24310503 tttttctctctccattgtttttgactaataaaaaaagagcacaacaaggttgtcccaaaagttgtagcaaaa 24310432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 25936328 - 25936391
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagtt 65  Q
    ||||||||||||||||||| |||||||||| |||| | |||| |||||  ||||| ||||||||    
T  25936328 ctttttctctctccattgtttttgaccaataagaaaagagaaaaacaagattgtcacaaaagtt 25936391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43434427 - 43434482
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||| |||||||| |||||||||| | ||||||| | ||||||||||||    
T  43434427 cctttttctctgtccattgtttttgaccaatcaaaagataggaaaacaaagttgtc 43434482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4550421 - 4550487
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| | |||| || | |||||| ||||| | ||||||||    
T  4550421 cctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgt 4550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 9032869 - 9032963
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||||| |||||||||| | || | |||| ||||| |||||| | |||||||||   |||||| |||  |||||||| |||||    
T  9032869 tttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctc 9032963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 9096026 - 9096123
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||| ||||||||||| |||||||||| | || | |||||||||| |||||  ||||||||||| ||||||  ||||  |||||||| | |||||||    
T  9096026 tttttccctctccattgtttttgaccaataaaaaaa-agaacaacaaggttgtaccaaaagttgtatcaaaataattgttcaaatatcattactctttt 9096123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 20956565 - 20956511
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||| |||||| |||||||||| | |||| |||| ||||||||||||    
T  20956565 ctttttctctcttcattgtttttgaccaatcaaaagagagaaaaacaaagttgtc 20956511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 22071591 - 22071684
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||| ||||| ||| |||||| |||||| |||| || |||||||||  | |||||||||| ||||||||||   ||||||||| |||||||    
T  22071591 tctctctctattgtttttaaccaataagaagagagaaaaagaaagttgtcaaacaagttgtacc-aaatggttgtactaatatcactcctctttt 22071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24235407 - 24235449
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| |||||||||| |||||| ||||    
T  24235407 cctttttctctctccattgtttttgaccaataagaagagagaa 24235449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 31048976 - 31049030
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||||||||||||| ||||| |||| | |||| |||| ||||||||||||    
T  31048976 ctttttctctctccattgtttttgatcaatcaaaagagagaaaaacaaagttgtc 31049030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 32574367 - 32574437
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||| |||||  |||||||||||||||| | || | ||||||||||| ||||||| ||| ||||    
T  32574367 ttttctctctctattgttattgaccaatgagaagagataataccaaagttgtcttaaaagttatacaaaaa 32574437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 41119506 - 41119452
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctca 59  Q
    |||||||||||||||| |||||||||||| |||| || | || ||||||||||||    
T  41119506 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtctca 41119452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44368186 - 44368120
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||| ||| |||||| |||| || || |||||| | ||||||||    
T  44368186 cctttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgt 44368120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55267985 - 55267919
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||  |||||||||| |||||| |||| ||||| ||| || | ||||||||    
T  55267985 cctttttctctctccattgcttttgaccaataagaagagagaaaaacaaggttatcactaaagttgt 55267919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39241287 - 39241187
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctc-aaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||| ||| ||| |||||||| |||| |||  ||  |||||||| | |||||||||  |||| ||||||| ||||||||||| |||||    
T  39241287 cctttttctctctccaatgtttttaaccaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaa-tggttgttaaaatatcactactctt 39241189  T
Q  100 tt 101  Q
    ||    
T  39241188 tt 39241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46794485 - 46794448
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  46794485 cctttttctctctccattgtttttgaccaatgaaaaga 46794448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 54036513 - 54036424
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc-tcaaaagttgtaccaaaatggttgtcaaaatatcac 92  Q
    |||||||||||||||||||| ||| |||||||| |||| |||  || |||||||||  ||||| ||||| ||||||||||||  |||||||||    
T  54036513 cctttttctctctccattgtttttaaccaatgaaaagagaga--aaaaaagttgtcaccaaaaattgta-caaaatggttgttcaaatatcac 54036424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15596483 - 15596574
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| || ||||||||| ||   |||| ||  |||||||| ||||||||||   |||||||||||  ||||||||||    
T  15596483 cctttttctctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcacaaaagttgt-ttaaaatggttgttcaaatatcact 15596574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 18944393 - 18944469
Alignment:
Q  22 tttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||||| |||||| |  |||| || |||||| |||||||||||||||||  |||||  |||||||||| ||||    
T  18944393 tttgaccaataagaagagaacacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcactactct 18944469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 37775410 - 37775338
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||| ||||||| ||| |  ||||||||||| || | |||| ||||| ||||||||||||||||||| ||||    
T  37775410 cttttactctctctattattattgaccaatgataatagagaataacaaggttgtctcaaaagttgtacgaaaa 37775338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 38844472 - 38844408
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||| ||||| |||||||||||| |||| |||  ||  |||||||| ||||||||||    
T  38844472 tttttctctctctattgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgt 38844408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38952776 - 38952808
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  38952776 cctttttctctctccattgtttttgaccaatga 38952808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 46173624 - 46173696
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa 73  Q
    |||||||||||||||||||| ||| |||||||| |||| | || ||  || ||||| ||||||||||| ||||    
T  46173624 cctttttctctctccattgttttttaccaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaa 46173696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46912783 - 46912723
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaa 61  Q
    |||||||||||||||||||| || ||||||| |||||| |||| |  ||||||||| ||||    
T  46912783 cctttttctctctccattgttttggaccaataagaagagagaaaatgaaagttgtcccaaa 46912723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 53091212 - 53091114
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaa---atggttgtcaaaatatcactgctct 98  Q
    |||||||||||||||||| |||||||||| | |  | |||| ||  |||||||| ||||||||||| ||||   ||||||||  |||||||||| ||||    
T  53091212 tttttctctctccattgtttttgaccaataaaagaagagaaaaaagaagttgtcacaaaagttgtatcaaatggatggttgttcaaatatcactactct 53091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 608643 - 608545
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||| |||||||||||||| |||||  |||||||| |||||||||    
T  608643 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaatatcattgctctttt 608545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 34976710 - 34976801
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||    
T  34976710 tctctctctattgt-tttgaccaatgagaagagagaacaacaaagttatctcaaaggttgtaccaaaatggttgacaaaatatcactactctt 34976801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 22422239 - 22422311
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaat 75  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||||  ||||||||||||||||||    
T  22422239 tttttctctctccattgtttttgactaatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaat 22422311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 3335417 - 3335344
Alignment:
Q  26 accaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||| |||| ||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||||    
T  3335417 accaatgaaaagagagaacaacaaagttgtctcaaatattgtatcaaaatggctgtcaaaatatcactgctctt 3335344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 35050261 - 35050350
Alignment:
Q  4 ttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||||| ||| | ||| ||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||||||||||| ||||    
T  35050261 ttttctctctctattatttttaaccaatgtgaagatagaacaacaaaattatctcaaaagttttaccaaaatagttgtcaaaataccact 35050350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 7304083 - 7303992
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    |||||||| ||||| ||||||||||||||||| |||||||  | |||||||||||||||||| |||||  |||||  |||||||||| ||||    
T  7304083 tctctctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatcactcctct 7303992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2165284 - 2165211
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||||| |||||||||||| |||| || ||| ||| |||||| ||||||||||| |||||    
T  2165284 cctttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaa 2165211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2176917 - 2176844
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||||| |||||||||||| |||| || ||| ||| |||||| ||||||||||| |||||    
T  2176917 cctttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaa 2176844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6997534 - 6997461
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||||||| || |||||||||||| |||| || ||||||| |||||| ||||||||||| |||||    
T  6997534 cctttttctctctccatcgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaa 6997461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 9395319 - 9395231
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||| |||||||||||| |||| || |||||||  ||||| ||||||||||| |||||  |||||  ||||||||    
T  9395319 tttttctctctccattgtttttgaccaatgataagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatca 9395231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 12151839 - 12151787
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgt 55  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  12151839 tttttctctctccattgtttttgaccaataagaagagagaacaacaaagttgt 12151787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 26378367 - 26378273
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||||||||||||||||||||||| ||   |||| ||  ||||||| ||||||||||| | |||||||||||  |||||||||| ||||    
T  26378367 tttttctctctccattgtctttgaccaatgaaaaatgagaaaaaagaagttgtatcaaaagttgt-ctaaaatggttgttcaaatatcactactct 26378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 237382 - 237316
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| | |||||||||| |||||| |||| ||||||| |||| ||||||||||    
T  237382 cctttttctctctccattatttttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgt 237316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17835699 - 17835789
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| ||| |||||| |||||| |||| ||||||||||||   |||||||| |  |||||| | |||||||||||    
T  17835699 cctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtccttaaatggatatcaaaatatca 17835789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 10557497 - 10557586
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||||||||| |||||||||||| |||| || |||||||  ||||  ||||||||||| |||||  |||||  ||||||||    
T  10557497 ctttttctctctccattgtttttgaccaatgaaaagagagtacaacaagattgttccaaaagttgtagcaaaaaagttgttcaaatatca 10557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 19713083 - 19713147
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||| |||||||| |||| || ||||||| |||||| ||||||||||    
T  19713083 tttttctctctccattgttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgt 19713147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11017469 - 11017535
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||  ||||| |||||| | ||||||||    
T  11017469 cctttttctctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgt 11017535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15328576 - 15328642
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| | |||| || | |||||||||||| | ||||||||    
T  15328576 cctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 15328642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16121239 - 16121329
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    ||||||||||||| |||| | |||||||||| | ||||||| |||||||| ||||| |||||||| || |||||  |||||  ||||||||    
T  16121239 cctttttctctcttcattatttttgaccaataaaaagatagcacaacaaaattgtcccaaaagttatagcaaaaaagttgttcaaatatca 16121329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 17442911 - 17443009
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctttt 101  Q
    |||||||||||| ||||| ||||| |||| |||||| |  |||| || |||||| |||||||||||||||||  |||||  ||| |||||| |||||||    
T  17442911 tttttctctctctattgtttttgatcaataagaagagaacacaataaggttgtcccaaaagttgtaccaaaagagttgttcaaaaatcactactctttt 17443009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25924848 - 25924782
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| | |||| || | |||||||||||| | ||||||||    
T  25924848 cctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 25924782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 32253869 - 32253966
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagataga-acaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||| ||| |||||||| |||| ||| | || ||| ||||| ||||||||||||| |||| |||||  |||||||||| ||||||    
T  32253869 tttttctctctccattgtttttaaccaatgaaaagagagagaaaaaaaaattgtcacaaaagttgtacc-aaatagttgttcaaatatcactactcttt 32253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 1803962 - 1804022
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  1803962 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 1804022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16533244 - 16533144
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| |  |||||||||  | | ||| ||||||| || ||||  |||||||| ||||||||    
T  16533244 cctttttctctctccattgttttttaccaatgaaaagagagaaaaggaaagttgtcaaataggttataccaaattgattgttcaaatatcattgctcttt 16533145  T
Q  101 t 101  Q
    |    
T  16533144 t 16533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 12044417 - 12044452
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaa 36  Q
    |||||||||||||||||||| |||||||||||||||    
T  12044417 cctttttctctctccattgtttttgaccaatgagaa 12044452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11742968 - 11742926
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||    
T  11742968 cctttttctctctctattgtttttgaccaatgagaagagagaa 11742926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 12501562 - 12501612
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagt 52  Q
    ||||||||||||||||||| |||||| ||| |||||| |||| ||||||||    
T  12501562 ctttttctctctccattgtttttgacgaataagaagagagaaaaacaaagt 12501612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15364746 - 15364812
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||| |||||| | |||| || | |||||||||||| | ||||||||    
T  15364746 cctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 15364812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16743250 - 16743208
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||    
T  16743250 cctttttctctctcaattgtttttgaccaatgagaagagagaa 16743208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 32135417 - 32135331
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||| ||||| |||||||||||| |||| || |||||||  |||||  |||||||||| |||||  |||||  ||||||||    
T  32135417 tttctctctcaattgtttttgaccaatgaaaagagagcacaacaagattgtcctaaaagttgtagcaaaaaagttgttcaaatatca 32135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32644699 - 32644741
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||    
T  32644699 cctttttctctctccattgttttttaccaatgagaagagagaa 32644741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 1897774 - 1897839
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||| |||||| |||||||||||| |||| |||| ||  | |||||| ||||||||||    
T  1897774 ctttttctctcttcattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 1897839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21443775 - 21443812
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaaga 38  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  21443775 cctttttctctctccattgtttttgaccaatgaaaaga 21443812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32729976 - 32730076
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||| ||||| ||||| |||||| |||| |||| || || ||||||  | | |||||||| ||||||||||  | |||||| ||||||||    
T  32729976 cctttttctctctctattgtttttgatcaatgaaaagagagaaaaagaatgttgtcaaataggttgtacc-aaatggttgttcatatatcattgctcttt 32730074  T
Q  101 ta 102  Q
    ||    
T  32730075 ta 32730076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 2582751 - 2582815
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||||| |||||| |||| |||| ||  | |||||| ||||||||||    
T  2582751 tttttctctctccattgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 2582815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 3089050 - 3089086
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaa 43  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  3089050 tctctctccattgtttttgaccaatgagaagagagaa 3089086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 3660335 - 3660271
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||| |||||| |||||||||| | |||| |||| ||||| |||||| | ||||||||    
T  3660335 tttttctctctgcattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgt 3660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7693402 - 7693505
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| || ||||||| |||||| |||| |  ||| |||||   |||||||| || ||||||||||  | |||||||| ||||||    
T  7693402 cctttttctctctccattgttttggaccaataagaagagagaaaataaaaattgtcatcaaagttgt-cccaaatggttgtacatatatcactactcttt 7693500  T
Q  101 tataa 105  Q
     ||||    
T  7693501 aataa 7693505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 12500010 - 12499962
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaa 50  Q
    ||||||||||||||||||| |||||| ||| |||||| |||| ||||||    
T  12500010 ctttttctctctccattgtttttgacgaataagaagagagaaaaacaaa 12499962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 12507339 - 12507291
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaa 50  Q
    ||||||||||||||||||| |||||| ||| |||||| |||| ||||||    
T  12507339 ctttttctctctccattgtttttgacgaataagaagagagaaaaacaaa 12507291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 12508891 - 12508939
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaa 50  Q
    ||||||||||||||||||| |||||| ||| |||||| |||| ||||||    
T  12508891 ctttttctctctccattgtttttgacgaataagaagagagaaaaacaaa 12508939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32457236 - 32457204
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatga 33  Q
    |||||||||||||||||||| ||||||||||||    
T  32457236 cctttttctctctccattgtttttgaccaatga 32457204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 997 - 1085
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatat 89  Q
    ||||||||||||||  |||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  997 cctttttctctctctgttgtttttgaccaatgaaaagagagaacaacaaagttatctcaaaagttgtaccaaaatagttgtcaaaatat 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 54646 - 54554
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    ||||||||| |||  ||||| |||||||||| | |||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  54646 cctttttctttctttattgtttttgaccaataaaaagagagaacaacaaagttgtctcaaagattgtaccaaaatagttgtcaaaatatcact 54554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 18093 - 18187
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    ||||| |||||||||||| ||| |||||||| |||| |||| || |||||||||  |||||||||| | |||| |||||  |||||||||| |||||    
T  18093 tttttatctctccattgtttttaaccaatgaaaagagagaa-aaaaaagttgtcataaaagttgtatc-aaatagttgttcaaatatcactactctt 18187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2929 - 3028
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||| ||||| ||||| ||||||||||| ||||||| ||| || |||||||  || ||||||||| ||||||||||||||||| ||||||    
T  2929 cctttttctctctctattgt-tttgatcaatgagaagaaagaacaaaaaaattatctcaaagattataccaaaatagttgtcaaaatatcactcctcttt 3027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3030 - 3120
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatca 91  Q
    |||||||||||||||||||| |||||||||||| |||| || |||| ||||||||| ||||||||||| |||||  |||||  ||||||||    
T  3030 cctttttctctctccattgtttttgaccaatgaaaagagagcacaataaagttgtcccaaaagttgtagcaaaaaagttgttcaaatatca 3120  T

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Target: scaffold0286 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17125 - 17198
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    |||||||||||||||||||| |||||||||||| |||| || ||| ||| |||||| ||||||||||| |||||    
T  17125 cctttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgtagcaaaa 17198  T

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Target: scaffold0651 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4835 - 4744
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcac 92  Q
    |||||||| ||||| ||||| ||| ||||||||||||| |||| || ||| |||||| ||| |||||||||| ||  |||||||||||||||    
T  4835 cctttttcactctctattgtttttaaccaatgagaagagagaagaataaaattgtcttaaaggttgtaccaatataattgtcaaaatatcac 4744  T

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Target: scaffold0514 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1480 - 1425
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||    
T  1480 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 1425  T

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Target: scaffold0514; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 1829 - 1739
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||| ||| | |||||||||| |||||| |  | |||||  ||||| |||||||||||||||||  |||||  ||||||||||    
T  1829 tttttctctctctattatttttgaccaataagaagagaacataacaagattgtcccaaaagttgtaccaaaagagttgttcaaatatcact 1739  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 145140 - 145226
Alignment:
Q  7 tctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||| ||||| |||||||||| |||||| |  ||||||| |||||| |||||||||||||||||  |||||  ||||||||||    
T  145140 tctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaagagttgttcaaatatcact 145226  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 147240 - 147174
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||| | ||||||||    
T  147240 cctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 147174  T

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Target: scaffold0508 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 11520 - 11421
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||  |||| ||  || |||| ||||||||||| | ||||| |||||  |||||||||| ||||||    
T  11520 cctttttctctctccattgtttttgaccaatgaaaagtgagaaaaaataaattgtatcaaaagttgt-ctaaaatagttgttcaaatatcactactcttt 11422  T

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Target: scaffold0172 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 17064 - 17128
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| |||||||||| |||||| |||  |||||||||||| | ||||||||    
T  17064 tttttctctctccattgtttttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgt 17128  T

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Target: scaffold0501 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10500 - 10434
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| |||||||||||| |||| |||  ||  |||||||| ||||||||||    
T  10500 cctttttctctctccattgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgt 10434  T

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Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15172 - 15076
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctctt 99  Q
    |||||||||||||||||||| ||| |||||||| || | |||| ||  |||||||| ||||||||||||| |||| |||||  |||||||||| |||||    
T  15172 cctttttctctctccattgtttttaaccaatgaaaaaagagaa-aaagaagttgtcacaaaagttgtacc-aaatagttgttcaaatatcactactctt 15076  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31584 - 31518
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||| |||||||| |||| |||| || ||||||||| ||||| ||||    
T  31584 cctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

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Target: scaffold0166 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34923 - 35022
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||||||||| |||||||||||| |||| |||| |  || ||||||  | | |||||||| ||||||||||  |||||||| ||||||||    
T  34923 cctttttctctctccattgt-tttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtacc-aaatggttgttcaaatatcattgctcttt 35020  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 16574 - 16483
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||| |||||||||||| | || |||| || ||  |||||  |||||||||||| ||||||||||  |||||||| |||||    
T  16574 tttctctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtacc-aaatggttgttgaaatatcattgctc 16483  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 56270 - 56361
Alignment:
Q  5 tttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctc 97  Q
    |||||||||||||||| |||||||||||| | || |||| || ||  |||||  |||||||||||| ||||||||||  |||||||| |||||    
T  56270 tttctctctccattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtacc-aaatggttgttgaaatatcattgctc 56361  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 48742 - 48814
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaa 74  Q
    ||||||||||||| ||||| |||||||||| |||||| |  ||||||| |||||| ||||| ||||| |||||    
T  48742 ctttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaa 48814  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 249124 - 249060
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||| ||||| |||| |||||| |||| ||||| |||||| | ||||||||    
T  249124 tttttctctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgt 249060  T

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Target: scaffold0576 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9517 - 9583
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    |||||||||||||||||||| ||| |||||| | |||| || | |||||||||||| | ||||||||    
T  9517 cctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgt 9583  T

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Target: scaffold0332 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 616 - 669
Alignment:
Q  3 tttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc 56  Q
    ||||||||| |||||||| |||||||||| |||||| |||  ||||||||||||    
T  616 tttttctctatccattgtttttgaccaataagaagagagagaaacaaagttgtc 669  T

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Target: scaffold0076 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 11284 - 11345
Alignment:
Q  6 ttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgt 67  Q
    ||||||||||||||| |||||||||||| |||| |||| ||  | |||||| ||||||||||    
T  11284 ttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgt 11345  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6904 - 6995
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtc-tcaaaagttgtaccaaaatggttgtcaaaatatcact 93  Q
    |||||||||||||||||||| ||| |||||||| |||| || | || |||||||||  |||||||||||  |||||||||||  ||||||||||    
T  6904 cctttttctctctccattgtttttaaccaatgaaaagagag-agaaaaaagttgtcgccaaaagttgta-taaaatggttgttcaaatatcact 6995  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 36087 - 36186
Alignment:
Q  2 ctttttctctctccattgtctttgaccaatgagaagatagaacaaca--aagttgtctc-aaaagttgtaccaaaatggttgtcaaaatatcactgctct 98  Q
    ||||||||||||||||| | |||||||||||| |||| |||| || |  |||||||| | |||||||||| | ||||||||||  |||||||||| ||||    
T  36087 ctttttctctctccattatttttgaccaatgaaaagagagaaaaaaaacaagttgtcacaaaaagttgtatc-aaatggttgttcaaatatcactactct 36185  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16478 - 16577
Alignment:
Q  1 cctttttctctctccattgtctttgaccaatgagaagatagaacaacaaagttgtctcaaaagttgtaccaaaatggttgtcaaaatatcactgctcttt 100  Q
    |||||||||||||| |||||  | |||||||||||| | |||| |  |||||||||   |||||||| |  ||||||||||||| |||||||| ||||||    
T  16478 cctttttctctctctattgttatggaccaatgagaatagagaaaataaaagttgtcaacaaagttgt-cataaatggttgtcaatatatcactactcttt 16576  T

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