View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12915_low_6 (Length: 426)
Name: NF12915_low_6
Description: NF12915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12915_low_6 |
 | |
|
| [»] scaffold0017 (2 HSPs) |
| | |
|
| [»] scaffold0061 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 384; Significance: 0; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 1 - 408
Target Start/End: Complemental strand, 8342773 - 8342366
Alignment:
| Q |
1 |
ccgatgctcgtgggtatttctccaattaatttatttccatcaagtatcaattccctcaaagatgataggactgaaaggtcaggtaacatgcccgaaattt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8342773 |
ccgatgctcgtgggtatttctccaattaatttatttccatcaagtatcaattccctcaaagatgataggactgaaaggtcaggtaacatgcccgaaattt |
8342674 |
T |
|
| Q |
101 |
gattattcgataagaatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatggatgatagaacctgaaatttctccgctcaagtt |
200 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8342673 |
gattatacgataaggatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatggatgatagaacctgaaatttctccgctcaagtg |
8342574 |
T |
|
| Q |
201 |
gttatcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaagt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8342573 |
gttatcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaagt |
8342474 |
T |
|
| Q |
301 |
gaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagcacccagt |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
8342473 |
gaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcatgaagttgaagctcttgaagattagagttgtagttaagcacccagt |
8342374 |
T |
|
| Q |
401 |
ggaatatc |
408 |
Q |
| |
|
|||||||| |
|
|
| T |
8342373 |
ggaatatc |
8342366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 194 - 408
Target Start/End: Complemental strand, 26728248 - 26728034
Alignment:
| Q |
194 |
tcaagttgttatcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaatt |
293 |
Q |
| |
|
|||||||||||||||||||| ||||| | | ||||||||||||| ||||||||||||||||||| |||||||||||| |||| | ||||| | || ||| |
|
|
| T |
26728248 |
tcaagttgttatcaaaagctgcaaatttttgcaaggtgcatatactcccaatggattttgggatcttgccttctagactgttgtctgagagttcgagatt |
26728149 |
T |
|
| Q |
294 |
cacaagtgaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagc |
393 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| | |||| |||||| ||| ||||||| | ||| | || ||||||||||||||| ||| ||||||| |
|
|
| T |
26728148 |
cacaagtgaatgcattatgttgccaaaatcatcaggaatagtacctcttacaaagttattagaaaggtagaggtcttgaagattagaggtgtagttaagc |
26728049 |
T |
|
| Q |
394 |
acccagtggaatatc |
408 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
26728048 |
accaagtggaatatc |
26728034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 8342920 - 8342886
Alignment:
| Q |
1 |
ccgatgctcgtgggtatttctccaattaatttatt |
35 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |
|
|
| T |
8342920 |
ccgatgctcgtgggtatttctccaattagtttatt |
8342886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 121; Significance: 7e-62; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 4 - 360
Target Start/End: Original strand, 11544316 - 11544672
Alignment:
| Q |
4 |
atgctcgtgggtatttctccaattaatttatttccatcaagtatcaattccctcaaagatgataggactgaaaggtcaggtaacatgcccgaaatttgat |
103 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||| || ||||| |||||||||| |||| ||| | |||||||| | |||| |||| |||| |
|
|
| T |
11544316 |
atgctcgtgggtatttctccaattaaattattgtcatctagaatcaaccatgtcaaagatgagaggattgacaagtcaggtatcgtgccagaaaactgat |
11544415 |
T |
|
| Q |
104 |
tattcgataagaatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatggatgatagaacctgaaatttctccgctcaagttgtt |
203 |
Q |
| |
|
||||||||||| |||| || |||| |||||| ||||||| ||||| | || |||||||||||||||||| || ||||||| |||| |||||| ||| |
|
|
| T |
11544416 |
tattcgataagtataggtcttgtaacgaggaagcatttccaatgcatcgtgaatagttattatggatgataaaatctgaaatccctccactcaagcggtt |
11544515 |
T |
|
| Q |
204 |
atcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaagtgaa |
303 |
Q |
| |
|
|||| |||||||||| || |||||||||||| || ||||||||||||||||| |||||||||||| |||| | |||||||||| || ||||||||| |
|
|
| T |
11544516 |
atcacgagcttcaaatgactgcaaggtgcatatgtttccaatggattttgggatcttgccttctagactgttctctgagagatagagatgcacaagtgat |
11544615 |
T |
|
| Q |
304 |
tgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaagt |
360 |
Q |
| |
|
|||||| |||||||||||||| | ||||||||||| ||||||||||| ||| |||| |
|
|
| T |
11544616 |
tgcattacgttgccaaaatcatcaggaatggtacctcttaacaagttaccataaagt |
11544672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 408
Target Start/End: Complemental strand, 44612892 - 44612488
Alignment:
| Q |
1 |
ccgatgctcgtgggtatttctccaattaatttatttccatcaagtatcaattccctcaaagatgataggactgaaaggtcaggtaacatgcccgaaattt |
100 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||| ||| ||| | ||| |||||||| || |||| ||||||||| |||||| |||||||||| | |
|
|
| T |
44612892 |
ccgatgctcgcgggtatttctccagttaatttattgacattaagaaccaacagtctcaaagacgagaggattgaaaggtctggtaacttgcccgaaatct |
44612793 |
T |
|
| Q |
101 |
gattattcgataagaatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatggatgatagaacctgaaatttctccgctcaagtt |
200 |
Q |
| |
|
||||||| ||| |||| ||||||| ||| |||| |||||| ||||| ||||| |||||| || | | ||| || || | || ||| ||||| |
|
|
| T |
44612792 |
cattattccatagccatagttcctgtaacgatgatagatttccaatgcagtgagaatagttactagaggtcataaaatctaa---ttgtccactcaatcg |
44612696 |
T |
|
| Q |
201 |
gttatcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaagt |
300 |
Q |
| |
|
||||||| || |||||| ||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||| | | ||||| || | | ||||| |
|
|
| T |
44612695 |
gttatcagttgcatcaaatgtctccaaggtgcaaatattcccaattgattttgggatcttgccttctagatagttgcttgtgagattgagacttacaagc |
44612596 |
T |
|
| Q |
301 |
gaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagcacccagt |
400 |
Q |
| |
|
||||||||| |||| |||||||||| | ||||||||||| | |||||||||| | ||| | ||| | ||||||||| ||| ||| |||||||| ||| | |
|
|
| T |
44612595 |
gaatgcattatgtttccaaaatcattaggaatggtacctctcaacaagttattagaaaggtcaaggtgttgaagattggagttgtagttaagcatccaat |
44612496 |
T |
|
| Q |
401 |
ggaatatc |
408 |
Q |
| |
|
||||||| |
|
|
| T |
44612495 |
cgaatatc |
44612488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 408
Target Start/End: Complemental strand, 44145484 - 44145291
Alignment:
| Q |
215 |
caaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaagtgaatgcattttgtt |
314 |
Q |
| |
|
||||| ||| ||||||||| ||||||||||| ||||||||||| || |||||||||||||| ||||||| | | | ||||| ||||||||| |||| |
|
|
| T |
44145484 |
caaatgtctgcaaggtgcaaatattcccaattgattttgggatctttccttctagattgttgtatgagagatcaagacttacaagcgaatgcattatgtt |
44145385 |
T |
|
| Q |
315 |
gccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagcacccagtggaatatc |
408 |
Q |
| |
|
|||||||||| | |||||||| || ||||||||||| ||| ||| | ||| | ||||||||| ||| ||| |||||||||||| | ||||||| |
|
|
| T |
44145384 |
tccaaaatcatcaggaatggtatctcttaacaagttaccataaagctcaaggtgttgaagattggagttgtagttaagcacccaattgaatatc |
44145291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 394
Target Start/End: Complemental strand, 16818316 - 16818024
Alignment:
| Q |
102 |
attattcgataagaatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatggatgatagaacctgaaatttctccgctcaagttg |
201 |
Q |
| |
|
|||||| |||||| |||| ||||||| |||||||||||||| |||| || | | |||||||||||||||| || ||||||| || || ||||||| | |
|
|
| T |
16818316 |
attatttgataaggatagtacctgtagtgaggatacatttccagtgcagcgataattgttattatggatgataaaatctgaaatctccccactcaagtgg |
16818217 |
T |
|
| Q |
202 |
ttatcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaagtg |
301 |
Q |
| |
|
| |||| ||| |||| | ||||||||||||||||||||| ||||||||||| || ||||| ||| | || ||||||| || ||| ||||||| |
|
|
| T |
16818216 |
taatcattagccctaaatgcttgcaaggtgcatatattcccaatcgattttgggatctttccttcaagactattgtaggagagatcgacattaacaagtg |
16818117 |
T |
|
| Q |
302 |
aatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagca |
394 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||| |||||||||||| | ||| | ||||| ||||||||| || ||| |||||||| |
|
|
| T |
16818116 |
aatgcattatgtaaccaaaatcatctagaatggtacctcttaacaagttattagaaaggtcaagcttttgaagattgaagttgtagttaagca |
16818024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 35899475 - 35899312
Alignment:
| Q |
4 |
atgctcgtgggtatttctccaattaatttatttccatcaagtatcaattccctcaaagatgataggactgaaaggtcaggtaacatgcccgaaatttgat |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||||| || |||||| | ||||||||||| | |||||||| |
|
|
| T |
35899475 |
atgctcgtgggtatttctccaaataatttatttccagcaagatacaacattctcaaagatgataagattgaaagatttggtaacatgccagtaatttgat |
35899376 |
T |
|
| Q |
104 |
tattcgataagaatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatg |
167 |
Q |
| |
|
|||| |||||| ||| ||||||| ||||||||||||||| ||||| | || ||||||||||| |
|
|
| T |
35899375 |
tatttgataaggataattcctgtaacgaggatacatttccaatgcagttcgaatagttattatg |
35899312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 408
Target Start/End: Complemental strand, 174394 - 174202
Alignment:
| Q |
216 |
aaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaagtgaatgcattttgttg |
315 |
Q |
| |
|
|||| ||||||||||||| |||||||||| ||||||||||| || ||||||| | |||| | ||||||| | | | ||||||||||||||| |||| |
|
|
| T |
174394 |
aaatgtctccaaggtgcaaatattcccaactgattttgggatctttccttctaaactgttccatgagagatcaagacttacaagtgaatgcattatgttt |
174295 |
T |
|
| Q |
316 |
ccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagcacccagtggaatatc |
408 |
Q |
| |
|
|||||||||| |||||| |||| | |||||||||||| ||| | ||| | ||||||||| ||||||| ||||| |||||| | ||||||| |
|
|
| T |
174294 |
ccaaaatcatccggaatgggacctctcaacaagttatcagaaaggtcaagttgttgaagattggagctgtagttaaacacccaattgaatatc |
174202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 407
Target Start/End: Complemental strand, 169699 - 169296
Alignment:
| Q |
1 |
ccgatgctcgtgggtatttctccaattaatttatt-tccatcaagtatcaattccctcaaagatgataggactgaaaggtcaggtaacatgcccgaaatt |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||| ||| ||||| ||| ||||||||||| ||||| |
|
|
| T |
169699 |
ccgatgctcgtgggtatttctccaattaatttattgtcca-caagactcaacagtctcaaagatgagaggtttgaaaagtccggtaacatgcctgaaatc |
169601 |
T |
|
| Q |
100 |
tgattattcgataagaatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatggatgatagaacctgaaatttctccgctcaagt |
199 |
Q |
| |
|
| |||||||||||| |||| ||||||| | | |||||||| || || || || || | |||| || | |||| || || || || || |||||| |
|
|
| T |
169600 |
tcattattcgataaccatagttcctgtaacaatgatacattaccaatacactgggaatggttactagaggtgatcaaatctaaa---tcaccactcaagc |
169504 |
T |
|
| Q |
200 |
tgttatcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaag |
299 |
Q |
| |
|
||| ||| |||||| ||| || ||||||||| ||||| ||||| ||| |||||| | ||||||||| | || | |||| || || | | ||||| |
|
|
| T |
169503 |
ggttctcataagcttggaatgtccgcaaggtgcaaatatttccaattgatactgggatctcaccttctagactattgcttgagatatggagacttacaag |
169404 |
T |
|
| Q |
300 |
tgaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagcacccag |
399 |
Q |
| |
|
|||||||||| |||| |||||||||| | |||| | |||| | ||||||||| | ||| | ||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
169403 |
tgaatgcattatgtttccaaaatcatcaggaataggacctctcaacaagttacgagaaaggtaaaggtgttgaagattagagctgtagttaagcacccaa |
169304 |
T |
|
| Q |
400 |
tggaatat |
407 |
Q |
| |
|
| |||||| |
|
|
| T |
169303 |
ttgaatat |
169296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 29093 - 29496
Alignment:
| Q |
1 |
ccgatgctcgtgggtatttctccaattaatttatt-tccatcaagtatcaattccctcaaagatgataggactgaaaggtcaggtaacatgcccgaaatt |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||||| ||| ||||| ||| ||||||||||| ||||| |
|
|
| T |
29093 |
ccgatgctcgtgggtatttctccaattaatttattgtcca-caagactcaacagtctcaaagatgagaggtttgaaaagtccggtaacatgcctgaaatc |
29191 |
T |
|
| Q |
100 |
tgattattcgataagaatagctcctgtagcgaggatacatttccgatgcaatgagagtagttattatggatgatagaacctgaaatttctccgctcaagt |
199 |
Q |
| |
|
| |||||||||||| |||| ||||||| | | |||||||| || || || || || | |||| || | |||| || || || || || |||||| |
|
|
| T |
29192 |
tcattattcgataaccatagttcctgtaacaatgatacattaccaatacactgggaatggttactagaggtgatcaaatctaaa---tcaccactcaagc |
29288 |
T |
|
| Q |
200 |
tgttatcaaaagcttcaaatctctccaaggtgcatatattcccaatggattttgggatattgccttctagattgttaccagagagatagaaattcacaag |
299 |
Q |
| |
|
||| ||| |||||| ||| || ||||||||| ||||| ||||| ||| |||||| | ||||||||| | || | |||| || || | | ||||| |
|
|
| T |
29289 |
ggttctcataagcttggaatgtccgcaaggtgcaaatatttccaattgatactgggatctcaccttctagactattgcttgagatatggagacttacaag |
29388 |
T |
|
| Q |
300 |
tgaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaagttgaagctcttgaagattagagctgtggttaagcacccag |
399 |
Q |
| |
|
|||||||||| |||| |||||||||| | |||| | |||| | ||||||||| | ||| | ||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
29389 |
tgaatgcattatgtttccaaaatcatcaggaataggacctctcaacaagttacgagaaaggtaaaggtgttgaagattagagctgtagttaagcacccaa |
29488 |
T |
|
| Q |
400 |
tggaatat |
407 |
Q |
| |
|
| |||||| |
|
|
| T |
29489 |
ttgaatat |
29496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 408
Target Start/End: Original strand, 29228084 - 29228233
Alignment:
| Q |
259 |
ttgccttctagattgttaccagagagatagaaattcacaagtgaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaa |
358 |
Q |
| |
|
|||||||||||| |||||| || |||| || | | ||||||||||||||| |||| ||||||||| | ||||||||||| || | || ||||||| | |
|
|
| T |
29228084 |
ttgccttctagactgttacttgacagattgagacttacaagtgaatgcattatgttcccaaaatcaccaggaatggtacctcttgataaattatcataga |
29228183 |
T |
|
| Q |
359 |
gttgaagctcttgaagattagagctgtggttaagcacccagtggaatatc |
408 |
Q |
| |
|
| | ||| | |||||| || ||||||| ||||| |||| ||| ||||||| |
|
|
| T |
29228184 |
ggtcaaggtgttgaaggtttgagctgtagttaaacaccaagttgaatatc |
29228233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 408
Target Start/End: Original strand, 29341383 - 29341532
Alignment:
| Q |
259 |
ttgccttctagattgttaccagagagatagaaattcacaagtgaatgcattttgttgccaaaatcatgatgaatggtaccttttaacaagttatcattaa |
358 |
Q |
| |
|
|||||||||||| |||||| || |||| || | | ||||||||||||||| |||| ||||||||| | ||||||||||| || | || ||||||| | |
|
|
| T |
29341383 |
ttgccttctagactgttacttgacagattgagacttacaagtgaatgcattatgttcccaaaatcaccaggaatggtacctcttgataaattatcataga |
29341482 |
T |
|
| Q |
359 |
gttgaagctcttgaagattagagctgtggttaagcacccagtggaatatc |
408 |
Q |
| |
|
| | ||| | |||||| || ||||||| ||||| |||| ||| ||||||| |
|
|
| T |
29341483 |
ggtcaaggtgttgaaggtttgagctgtagttaaacaccaagttgaatatc |
29341532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 12249350 - 12249394
Alignment:
| Q |
243 |
aatggattttgggatattgccttctagattgttaccagagagata |
287 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||||||| ||||| |
|
|
| T |
12249350 |
aatggattttggaatattgccttgtagcttgttaccagatagata |
12249394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 29507458 - 29507516
Alignment:
| Q |
55 |
ctcaaagatgataggactgaaaggtcaggtaacatgcccgaaatttgattattcgataa |
113 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||| ||| ||||| | ||||| |||||| |
|
|
| T |
29507458 |
ctcaaagatgaaagggctgaaaggtcaggtaacaagcctgaaatctcattatgcgataa |
29507516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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