View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12915_low_9 (Length: 386)

Name: NF12915_low_9
Description: NF12915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12915_low_9
NF12915_low_9
[»] chr2 (44 HSPs)
chr2 (1-376)||(42117149-42117524)
chr2 (258-352)||(31264125-31264219)
chr2 (257-353)||(36196469-36196565)
chr2 (262-345)||(34336102-34336185)
chr2 (257-350)||(19080691-19080784)
chr2 (261-349)||(27893530-27893618)
chr2 (258-353)||(11871716-11871811)
chr2 (253-329)||(31263923-31263999)
chr2 (238-347)||(21813189-21813289)
chr2 (257-349)||(15506048-15506140)
chr2 (257-325)||(31263987-31264055)
chr2 (240-329)||(31264208-31264299)
chr2 (243-349)||(20535490-20535597)
chr2 (243-329)||(27893610-27893696)
chr2 (244-329)||(16781098-16781184)
chr2 (257-327)||(30907136-30907206)
chr2 (243-329)||(37543129-37543215)
chr2 (1-153)||(30397366-30397517)
chr2 (243-326)||(30907367-30907450)
chr2 (243-329)||(30907063-30907148)
chr2 (240-310)||(34336342-34336412)
chr2 (244-305)||(16780928-16780989)
chr2 (240-329)||(34336020-34336109)
chr2 (273-326)||(39376399-39376452)
chr2 (293-345)||(15506478-15506530)
chr2 (243-310)||(27893023-27893090)
chr2 (255-326)||(34429681-34429752)
chr2 (251-329)||(36196553-36196629)
chr2 (240-345)||(5117052-5117156)
chr2 (157-193)||(29191781-29191817)
chr2 (243-298)||(13315808-13315863)
chr2 (257-323)||(16781044-16781110)
chr2 (262-305)||(37543014-37543057)
chr2 (243-310)||(41265313-41265380)
chr2 (161-195)||(14994749-14994783)
chr2 (299-329)||(21813295-21813325)
chr2 (305-351)||(27893136-27893182)
chr2 (282-316)||(30907316-30907350)
chr2 (257-307)||(34429743-34429793)
chr2 (282-351)||(39301404-39301472)
chr2 (293-329)||(921167-921203)
chr2 (241-301)||(11871828-11871888)
chr2 (241-329)||(19080615-19080703)
chr2 (257-313)||(39301889-39301945)
[»] chr6 (49 HSPs)
chr6 (1-157)||(18967578-18967733)
chr6 (253-353)||(9901958-9902058)
chr6 (243-329)||(20575401-20575487)
chr6 (258-353)||(17180104-17180199)
chr6 (257-347)||(32417684-32417774)
chr6 (257-347)||(32423525-32423615)
chr6 (257-341)||(20575475-20575559)
chr6 (240-329)||(9902314-9902403)
chr6 (244-329)||(11527526-11527611)
chr6 (240-329)||(16168740-16168829)
chr6 (257-350)||(17179687-17179780)
chr6 (244-329)||(32417459-32417544)
chr6 (244-329)||(32423300-32423385)
chr6 (293-353)||(10862552-10862612)
chr6 (261-350)||(11528013-11528102)
chr6 (262-329)||(32417537-32417604)
chr6 (262-329)||(32423378-32423445)
chr6 (244-326)||(2839615-2839697)
chr6 (286-352)||(10962830-10962896)
chr6 (243-329)||(16168454-16168540)
chr6 (257-315)||(20575600-20575658)
chr6 (253-353)||(10407308-10407408)
chr6 (257-345)||(16168528-16168607)
chr6 (293-357)||(17131620-17131684)
chr6 (1-113)||(23014999-23015110)
chr6 (258-314)||(32417593-32417649)
chr6 (258-314)||(32423434-32423490)
chr6 (246-329)||(10862637-10862720)
chr6 (258-353)||(24139473-24139568)
chr6 (243-329)||(11528094-11528180)
chr6 (243-329)||(20575696-20575780)
chr6 (243-329)||(32417762-32417848)
chr6 (243-329)||(32423603-32423689)
chr6 (244-329)||(2840101-2840186)
chr6 (257-353)||(11527599-11527686)
chr6 (257-329)||(16168680-16168752)
chr6 (316-353)||(9946679-9946716)
chr6 (312-353)||(28630591-28630632)
chr6 (305-349)||(2840030-2840074)
chr6 (244-351)||(10407709-10407817)
chr6 (282-350)||(17132183-17132251)
chr6 (282-329)||(10963162-10963209)
chr6 (286-329)||(24139557-24139600)
chr6 (162-195)||(7477028-7477061)
chr6 (162-195)||(7477394-7477427)
chr6 (162-195)||(7477760-7477793)
chr6 (161-193)||(7271654-7271686)
chr6 (257-305)||(16168644-16168692)
chr6 (246-310)||(28630685-28630749)
[»] chr3 (35 HSPs)
chr3 (1-157)||(24671487-24671642)
chr3 (10-157)||(4578785-4578931)
chr3 (1-144)||(34489733-34489875)
chr3 (243-330)||(31247692-31247779)
chr3 (1-144)||(34523197-34523339)
chr3 (244-345)||(24707457-24707558)
chr3 (261-351)||(21376633-21376723)
chr3 (1-142)||(34470091-34470231)
chr3 (240-347)||(54456657-54456764)
chr3 (257-353)||(31247609-31247705)
chr3 (240-329)||(50530232-50530321)
chr3 (285-353)||(4276226-4276294)
chr3 (243-353)||(14629274-14629375)
chr3 (243-329)||(21377048-21377134)
chr3 (244-351)||(21410273-21410380)
chr3 (259-350)||(31247192-31247282)
chr3 (242-329)||(3087070-3087156)
chr3 (1-153)||(27630585-27630728)
chr3 (244-305)||(35555987-35556048)
chr3 (257-310)||(54456803-54456856)
chr3 (253-329)||(3088142-3088218)
chr3 (305-353)||(21376984-21377032)
chr3 (243-295)||(53782953-53783005)
chr3 (259-329)||(5505729-5505800)
chr3 (240-350)||(19153864-19153974)
chr3 (262-349)||(35555595-35555682)
chr3 (261-326)||(54456847-54456912)
chr3 (305-349)||(3088071-3088115)
chr3 (239-323)||(49559492-49559576)
chr3 (262-305)||(4276629-4276672)
chr3 (258-305)||(14964737-14964784)
chr3 (242-305)||(50530397-50530460)
chr3 (288-329)||(19664436-19664477)
chr3 (290-330)||(13712077-13712117)
chr3 (243-271)||(35545565-35545593)
[»] scaffold0074 (2 HSPs)
scaffold0074 (1-157)||(27687-27842)
scaffold0074 (32-154)||(29508-29629)
[»] chr4 (53 HSPs)
chr4 (1-157)||(10426974-10427129)
chr4 (241-350)||(52567730-52567839)
chr4 (262-353)||(5387194-5387285)
chr4 (243-339)||(42116047-42116143)
chr4 (258-351)||(52181779-52181872)
chr4 (240-352)||(19632212-19632323)
chr4 (241-329)||(43098169-43098257)
chr4 (261-352)||(8408826-8408917)
chr4 (257-344)||(26329921-26330008)
chr4 (257-351)||(31229318-31229412)
chr4 (259-329)||(26329996-26330066)
chr4 (256-329)||(41735814-41735887)
chr4 (244-329)||(43098461-43098546)
chr4 (244-343)||(2508252-2508349)
chr4 (257-329)||(2788964-2789036)
chr4 (257-353)||(52568161-52568256)
chr4 (244-347)||(36890618-36890721)
chr4 (240-329)||(2788776-2788865)
chr4 (243-329)||(26330056-26330142)
chr4 (257-329)||(43098401-43098473)
chr4 (289-353)||(44915933-44915997)
chr4 (243-329)||(19631752-19631838)
chr4 (282-349)||(42115660-42115727)
chr4 (238-329)||(52865940-52866031)
chr4 (231-306)||(52866366-52866441)
chr4 (257-347)||(22025116-22025206)
chr4 (244-329)||(52183473-52183558)
chr4 (257-310)||(26329826-26329879)
chr4 (283-335)||(2508678-2508730)
chr4 (259-349)||(8408407-8408497)
chr4 (240-305)||(8408337-8408402)
chr4 (282-343)||(35023955-35024016)
chr4 (262-315)||(35046550-35046603)
chr4 (296-344)||(43098280-43098328)
chr4 (159-227)||(28947029-28947099)
chr4 (243-329)||(22025350-22025436)
chr4 (244-310)||(23085275-23085340)
chr4 (263-329)||(35046437-35046503)
chr4 (243-297)||(41735958-41736012)
chr4 (243-305)||(44916324-44916386)
chr4 (288-353)||(19681283-19681348)
chr4 (243-288)||(22025055-22025100)
chr4 (238-302)||(8408936-8409000)
chr4 (261-329)||(22025291-22025358)
chr4 (257-305)||(41735875-41735923)
chr4 (259-310)||(5387131-5387182)
chr4 (305-352)||(19631869-19631916)
chr4 (259-310)||(35046493-35046544)
chr4 (305-352)||(52866058-52866105)
chr4 (240-329)||(9319996-9320085)
chr4 (288-329)||(31617640-31617681)
chr4 (155-195)||(40422009-40422049)
chr4 (253-329)||(52568244-52568320)
[»] scaffold0374 (2 HSPs)
scaffold0374 (240-353)||(16159-16272)
scaffold0374 (240-349)||(16576-16684)
[»] chr5 (54 HSPs)
chr5 (257-354)||(36418364-36418461)
chr5 (240-352)||(32459413-32459525)
chr5 (244-329)||(6336133-6336218)
chr5 (238-329)||(18951287-18951378)
chr5 (244-350)||(18238306-18238412)
chr5 (240-329)||(20728514-20728603)
chr5 (259-352)||(20729010-20729103)
chr5 (258-353)||(18249022-18249117)
chr5 (244-353)||(35891226-35891335)
chr5 (258-353)||(5734946-5735040)
chr5 (261-352)||(18237919-18238010)
chr5 (257-352)||(20728591-20728686)
chr5 (243-353)||(26275973-26276074)
chr5 (244-351)||(32459822-32459929)
chr5 (261-347)||(6336298-6336384)
chr5 (244-329)||(26275494-26275579)
chr5 (240-305)||(31813955-31814020)
chr5 (243-329)||(1722489-1722575)
chr5 (259-353)||(1722940-1723034)
chr5 (286-348)||(13543179-13543241)
chr5 (243-329)||(14235557-14235643)
chr5 (259-329)||(18951368-18951438)
chr5 (240-329)||(18248944-18249033)
chr5 (283-351)||(13543569-13543637)
chr5 (290-353)||(5734558-5734621)
chr5 (238-329)||(13538453-13538544)
chr5 (238-329)||(13543068-13543159)
chr5 (286-353)||(30737832-30737899)
chr5 (282-329)||(32660287-32660334)
chr5 (254-329)||(36418449-36418524)
chr5 (257-352)||(30738223-30738320)
chr5 (239-329)||(38405584-38405674)
chr5 (257-310)||(6336206-6336259)
chr5 (240-329)||(35189900-35189988)
chr5 (244-329)||(35190461-35190546)
chr5 (238-329)||(5735029-5735120)
chr5 (242-329)||(19278693-19278779)
chr5 (242-325)||(36417874-36417957)
chr5 (261-335)||(1722567-1722641)
chr5 (305-347)||(38405518-38405560)
chr5 (296-353)||(19279187-19279244)
chr5 (257-310)||(32660322-32660375)
chr5 (257-306)||(35189976-35190025)
chr5 (281-329)||(9919230-9919278)
chr5 (305-353)||(13538575-13538623)
chr5 (289-329)||(35342325-35342365)
chr5 (261-352)||(19278771-19278862)
chr5 (250-329)||(32660195-32660274)
chr5 (161-195)||(9828182-9828216)
chr5 (243-329)||(13543651-13543737)
chr5 (305-351)||(36417988-36418034)
chr5 (281-329)||(9919750-9919798)
chr5 (161-193)||(35446954-35446986)
chr5 (308-344)||(38082661-38082697)
[»] chr8 (71 HSPs)
chr8 (257-353)||(30576634-30576730)
chr8 (240-350)||(34686875-34686985)
chr8 (244-353)||(5358632-5358741)
chr8 (259-352)||(9276960-9277052)
chr8 (243-351)||(13771843-13771951)
chr8 (262-345)||(9770768-9770851)
chr8 (257-347)||(29794238-29794328)
chr8 (243-352)||(35433885-35433994)
chr8 (258-353)||(39700948-39701043)
chr8 (243-329)||(25737092-25737178)
chr8 (258-344)||(30576215-30576301)
chr8 (240-345)||(13771403-13771508)
chr8 (257-353)||(23553417-23553513)
chr8 (244-329)||(36359890-36359975)
chr8 (262-347)||(36359968-36360053)
chr8 (240-349)||(44040809-44040916)
chr8 (244-329)||(45017977-45018062)
chr8 (240-344)||(35434313-35434417)
chr8 (243-329)||(39701451-39701537)
chr8 (258-346)||(4613803-4613891)
chr8 (258-350)||(16197092-16197184)
chr8 (257-353)||(25730097-25730193)
chr8 (243-329)||(9770844-9770930)
chr8 (238-329)||(36314705-36314796)
chr8 (243-326)||(36360136-36360219)
chr8 (258-353)||(39701367-39701462)
chr8 (238-329)||(45017730-45017821)
chr8 (244-310)||(8713835-8713901)
chr8 (261-351)||(8714330-8714420)
chr8 (265-351)||(9276553-9276639)
chr8 (243-329)||(29794316-29794402)
chr8 (258-352)||(44041263-44041357)
chr8 (282-343)||(16208674-16208735)
chr8 (244-329)||(30576718-30576803)
chr8 (257-353)||(25737583-25737679)
chr8 (254-329)||(8714412-8714487)
chr8 (238-329)||(16197012-16197103)
chr8 (262-352)||(31169460-31169550)
chr8 (243-304)||(23179036-23179096)
chr8 (240-329)||(29030176-29030265)
chr8 (261-352)||(8713912-8714003)
chr8 (257-305)||(11113613-11113661)
chr8 (257-329)||(40553297-40553369)
chr8 (281-329)||(43422944-43422992)
chr8 (243-329)||(14871406-14871493)
chr8 (259-350)||(25737168-25737259)
chr8 (240-326)||(6236290-6236376)
chr8 (243-329)||(29792576-29792662)
chr8 (243-329)||(30576140-30576226)
chr8 (240-329)||(23553340-23553429)
chr8 (262-347)||(45017814-45017899)
chr8 (253-329)||(44041346-44041422)
chr8 (262-329)||(9277042-9277109)
chr8 (246-329)||(9770552-9770635)
chr8 (238-329)||(11113534-11113625)
chr8 (240-315)||(25730196-25730271)
chr8 (244-329)||(4613729-4613814)
chr8 (257-306)||(9770674-9770723)
chr8 (241-329)||(31169543-31169630)
chr8 (257-329)||(39700887-39700959)
chr8 (283-351)||(6235818-6235886)
chr8 (253-329)||(40553357-40553433)
chr8 (305-352)||(14871331-14871378)
chr8 (240-315)||(25737682-25737757)
chr8 (293-344)||(34686509-34686560)
chr8 (290-329)||(43423091-43423130)
chr8 (244-326)||(43422847-43422929)
chr8 (240-310)||(43423169-43423239)
chr8 (257-306)||(45017942-45017989)
chr8 (281-310)||(36360092-36360121)
chr8 (257-305)||(43422980-43423028)
[»] chr1 (44 HSPs)
chr1 (10-157)||(46190927-46191071)
chr1 (263-352)||(48352708-48352797)
chr1 (262-353)||(8902829-8902920)
chr1 (242-346)||(2965479-2965583)
chr1 (264-347)||(1765763-1765846)
chr1 (258-353)||(27351115-27351210)
chr1 (240-329)||(11897828-11897917)
chr1 (240-329)||(29419098-29419187)
chr1 (243-350)||(39302320-39302427)
chr1 (282-352)||(10686680-10686750)
chr1 (244-326)||(10686766-10686848)
chr1 (1-106)||(4129859-4129963)
chr1 (259-353)||(34254564-34254658)
chr1 (258-347)||(44963903-44963992)
chr1 (254-329)||(34254499-34254574)
chr1 (243-353)||(8903244-8903354)
chr1 (243-329)||(48352791-48352877)
chr1 (240-329)||(17898897-17898986)
chr1 (244-329)||(27351041-27351126)
chr1 (257-305)||(4772650-4772698)
chr1 (254-329)||(10685848-10685923)
chr1 (243-310)||(39302756-39302823)
chr1 (262-329)||(44964063-44964130)
chr1 (257-329)||(17898837-17898909)
chr1 (262-329)||(1765917-1765984)
chr1 (262-353)||(10685916-10685998)
chr1 (257-349)||(29419014-29419110)
chr1 (303-353)||(48352309-48352359)
chr1 (243-323)||(5522043-5522123)
chr1 (305-353)||(49650975-49651023)
chr1 (262-305)||(1765881-1765924)
chr1 (242-301)||(28055744-28055803)
chr1 (244-305)||(4772161-4772222)
chr1 (240-326)||(27351587-27351673)
chr1 (239-329)||(49650558-49650648)
chr1 (283-329)||(49651050-49651096)
chr1 (288-329)||(23767619-23767660)
chr1 (257-310)||(44964022-44964075)
chr1 (163-195)||(622841-622873)
chr1 (286-351)||(2965897-2965958)
chr1 (263-319)||(34254998-34255053)
chr1 (161-193)||(35938326-35938358)
chr1 (305-353)||(49650676-49650724)
chr1 (289-329)||(49973979-49974019)
[»] chr7 (97 HSPs)
chr7 (1-157)||(2323760-2323915)
chr7 (259-345)||(19925311-19925397)
chr7 (259-357)||(28256558-28256656)
chr7 (257-351)||(31175924-31176018)
chr7 (261-349)||(10619867-10619955)
chr7 (257-353)||(35214870-35214966)
chr7 (259-353)||(5559173-5559268)
chr7 (283-350)||(27995548-27995615)
chr7 (1-150)||(16184099-16184247)
chr7 (240-329)||(31893525-31893614)
chr7 (262-353)||(1349114-1349208)
chr7 (32-144)||(8140457-8140568)
chr7 (261-349)||(39959163-39959251)
chr7 (259-345)||(4187663-4187749)
chr7 (254-352)||(33235518-33235616)
chr7 (240-326)||(33879568-33879654)
chr7 (244-329)||(5805028-5805113)
chr7 (257-342)||(5805101-5805186)
chr7 (257-353)||(33235097-33235193)
chr7 (257-329)||(33879505-33879577)
chr7 (238-329)||(1441482-1441573)
chr7 (243-329)||(5559096-5559183)
chr7 (243-329)||(5559667-5559752)
chr7 (295-353)||(8039747-8039805)
chr7 (243-329)||(20366587-20366673)
chr7 (259-329)||(21412931-21413001)
chr7 (253-351)||(28104296-28104394)
chr7 (240-329)||(8039649-8039738)
chr7 (261-352)||(23679497-23679587)
chr7 (244-329)||(19925387-19925472)
chr7 (282-347)||(20101909-20101974)
chr7 (259-335)||(20366521-20366597)
chr7 (283-344)||(34951316-34951377)
chr7 (244-305)||(36566526-36566587)
chr7 (281-353)||(20183856-20183928)
chr7 (286-353)||(1286770-1286836)
chr7 (260-347)||(21413081-21413167)
chr7 (257-335)||(1286433-1286511)
chr7 (259-342)||(1346545-1346624)
chr7 (243-329)||(19925094-19925180)
chr7 (243-329)||(34951511-34951597)
chr7 (258-331)||(5805581-5805654)
chr7 (282-343)||(6220351-6220411)
chr7 (160-213)||(16698347-16698400)
chr7 (160-213)||(17672583-17672636)
chr7 (241-329)||(21433131-21433219)
chr7 (240-329)||(29591106-29591194)
chr7 (253-329)||(35214805-35214882)
chr7 (240-329)||(40904678-40904766)
chr7 (240-329)||(41020173-41020261)
chr7 (258-354)||(20366112-20366207)
chr7 (241-329)||(28256480-28256568)
chr7 (241-329)||(36566265-36566353)
chr7 (243-310)||(1440995-1441062)
chr7 (238-329)||(20366033-20366123)
chr7 (258-329)||(21433208-21433279)
chr7 (282-353)||(27995149-27995220)
chr7 (293-352)||(29590711-29590770)
chr7 (243-329)||(31893239-31893325)
chr7 (262-352)||(35215290-35215380)
chr7 (243-329)||(39959243-39959329)
chr7 (244-329)||(1286360-1286445)
chr7 (254-327)||(8040197-8040270)
chr7 (261-329)||(1349201-1349269)
chr7 (305-353)||(1441407-1441455)
chr7 (257-305)||(5559631-5559679)
chr7 (305-353)||(8040121-8040169)
chr7 (305-353)||(39958789-39958837)
chr7 (286-345)||(23150731-23150790)
chr7 (243-326)||(27995050-27995133)
chr7 (257-352)||(42990563-42990658)
chr7 (243-329)||(5805643-5805728)
chr7 (259-329)||(19925170-19925239)
chr7 (262-316)||(21433337-21433391)
chr7 (244-329)||(22876903-22876987)
chr7 (244-325)||(33235024-33235105)
chr7 (257-326)||(40904754-40904823)
chr7 (308-353)||(42990983-42991028)
chr7 (257-305)||(31893489-31893537)
chr7 (161-238)||(38453022-38453100)
chr7 (250-329)||(1346476-1346555)
chr7 (298-329)||(33879440-33879471)
chr7 (161-195)||(3756377-3756411)
chr7 (259-329)||(34951451-34951521)
chr7 (260-305)||(10620239-10620284)
chr7 (260-301)||(19925230-19925271)
chr7 (244-329)||(20101813-20101897)
chr7 (244-329)||(21412856-21412941)
chr7 (282-315)||(21413014-21413047)
chr7 (258-306)||(31893437-31893485)
chr7 (244-329)||(39958677-39958762)
chr7 (298-326)||(21413048-21413076)
chr7 (290-326)||(29591047-29591083)
chr7 (243-271)||(31176057-31176085)
chr7 (289-329)||(35600078-35600118)
chr7 (150-186)||(41909246-41909282)
chr7 (289-329)||(42888994-42889034)
[»] scaffold0019 (3 HSPs)
scaffold0019 (240-329)||(124129-124218)
scaffold0019 (243-329)||(124406-124492)
scaffold0019 (257-329)||(124346-124418)
[»] scaffold0746 (4 HSPs)
scaffold0746 (257-353)||(500-596)
scaffold0746 (244-329)||(11-96)
scaffold0746 (240-326)||(587-673)
scaffold0746 (259-350)||(86-176)
[»] scaffold0070 (2 HSPs)
scaffold0070 (257-353)||(28607-28703)
scaffold0070 (240-326)||(28530-28616)
[»] scaffold0041 (2 HSPs)
scaffold0041 (240-329)||(45252-45340)
scaffold0041 (257-326)||(45195-45264)
[»] scaffold0027 (3 HSPs)
scaffold0027 (243-329)||(9922-10008)
scaffold0027 (240-329)||(9380-9469)
scaffold0027 (305-353)||(9496-9544)


Alignment Details
Target: chr2 (Bit Score: 340; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 42117524 - 42117149
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  42117524 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcaccatggacatgtgtcttgttaca 42117425  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaattccatgaaaattgctcttctcccatttggttttgctcattcccctttt 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42117424 aaagtggctttaccaaacataatattgggtttggatcatcatttagggcaattccatgaaaattgctcttctcccttttggttttgctcattcccctttt 42117325  T
Q  201 acttttgtgcctatgagctaactcacgctgaaaaatgttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtt 300  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42117324 acttttgtgcctatgagctaactcacgcttaaaaatgttggtcaaataccatttttggtccttttagtttgtcagaaattctaagttagtcctttaagtt 42117225  T
Q  301 tcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctgtgccatgttgttaatctctg 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42117224 tcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctgtgccatgttgttagtctctg 42117149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 31264219 - 31264125
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||||||| ||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  31264219 gtccttttagtttgacagaatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtcaccc 31264125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 36196565 - 36196469
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  36196565 ggtctttttagtttgacagaatttccaagttagtcatttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccc 36196469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 34336102 - 34336185
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 345  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  34336102 ttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaataggtctttttagttaataaactatttcacc 34336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 350
Target Start/End: Original strand, 19080691 - 19080784
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    |||| |||||||||| ||||| || |||||||| | |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  19080691 ggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagttgataaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 27893618 - 27893530
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||||| |||||| || ||||||||||||||| |||||| |||||    
T  27893618 cttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgtta 27893530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 11871811 - 11871716
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||| |||||||| ||||| |  | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||| |||||||||||    
T  11871811 gtcctcttagtttgacagaattctcgagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaattatttaaccgttacccc 11871716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 31263923 - 31263999
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||||||||| ||||||| || |||||||||||||||    
T  31263923 ttttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtt 31263999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 347
Target Start/End: Original strand, 21813189 - 21813289
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaaca 337  Q
    |||| |||||||||||||| ||||||||||||||  |||| |  |||||||||||||||||||||||||         |||||||||||||||||||||     
T  21813189 ttggccaaataccacttttagtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa---------aggtccttttagttgataaact 21813279  T
Q  338 atttcaccgt 347  Q
    ||||||||||    
T  21813280 atttcaccgt 21813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 15506048 - 15506140
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    ||||||||||||||| || || |  ||| ||| |||||||||||| |||||||||||| ||||| ||||| ||||||||| ||||||||||||    
T  15506048 ggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtta 15506140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 31263987 - 31264055
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttt 325  Q
    ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||| |||||||| |||||    
T  31263987 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttt 31264055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 31264299 - 31264208
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagt--tagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| |||||||| ||||||||||||| ||||| ||||||||  |||| ||||||||||| ||||||| || || ||||||||||||    
T  31264299 ggtcaaatatcacttttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtt 31264208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 349
Target Start/End: Original strand, 20535490 - 20535597
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaa-gtttcaaaagttttaaataggtccttttagttgataaacaattt 341  Q
    |||||||||| || | ||||||||||||  || || |  |||||||||| ||||| |||||||| |||| ||||||||| ||||||||||||||| ||||    
T  20535490 caaataccacgttagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagttgataaactattt 20535589  T
Q  342 caccgtta 349  Q
    ||||||||    
T  20535590 caccgtta 20535597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 27893696 - 27893610
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||  |||||| || ||||| |||||||||    
T  27893696 caaatatcacttttggtccttttagtttgaca-aaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtt 27893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 16781184 - 16781098
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcc-tttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||||||||||| |||||||||| ||||| |  ||||||||||| |||||||||  |||||||||| |||||||||||||||    
T  16781184 aaatatcacttttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtt 16781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 30907136 - 30907206
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttag 327  Q
    ||||||||||||||| || || |  ||||||||||||||||||||||||||||| |||||| |||||||||    
T  30907136 ggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttag 30907206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 37543215 - 37543129
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| ||||||| ||||||||||| ||||| || |||||||||| |||||||||  ||||||| || || ||||||||||||    
T  37543215 caaataccatttttggttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtt 37543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 30397366 - 30397517
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||||| |||||  ||| ||| || || ||||||||  |||||||||| | ||||||||| || |||||| |||| |||| ||||||  |||| ||||    
T  30397366 tgcaacttgtcaatatatgtaaccattcattttgccactatgcattacat-gcgaaatgcaacttatcttacatgcaccatgaacatgtatcttgctaca 30397464  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaatt 153  Q
    ||||||| |||| ||| || |||||||  |||||||||| |||| ||||||||    
T  30397465 aaagtggttttagcaatcacaatattggatttggatcataatttgggccaatt 30397517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 326
Target Start/End: Complemental strand, 30907450 - 30907367
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||||||||||||  ||||||||||||| || || ||  ||||||||| |||||||||| ||||||| || ||||||||||||    
T  30907450 caaataccacttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtcctttta 30907367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 30907063 - 30907148
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| || |||||||| |||||||||| ||||| |  |||||||||| |||||||||| ||||||| || |||||||||||||||    
T  30907063 caaatatcatttttggtc-ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtt 30907148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 34336412 - 34336342
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||||||| |||||||||||||||||||||| ||||| |  ||| |||||||||||| |||| |||||||    
T  34336412 ggtcaaatatcacttttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagttt 34336342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 16780928 - 16780989
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||||||| |||||||| || | ||||| || ||||||||||||||||||||||||    
T  16780928 aaataccacttttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaa 16780989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 34336020 - 34336109
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||| |||||||||||||  | || || ||| ||||||||||||||||  ||||||| || || ||| ||||||||    
T  34336020 ggtcaaataccacttttgatccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtt 34336109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 326
Target Start/End: Complemental strand, 39376452 - 39376399
Alignment:
Q  273 cagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  39376452 cagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtcttttta 39376399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 15506530 - 15506478
Alignment:
Q  293 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 345  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  15506530 tttaaattttaaaagttttaaatatgtccttttagttgataaactatttcacc 15506478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 27893023 - 27893090
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||||||||| |||||||||||||||||| ||||| |  ||||||| |||||||| |||| |||||||    
T  27893023 caaataccacgtttggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagttt 27893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 34429681 - 34429752
Alignment:
Q  255 ttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||||||||||||||| ||||| |  |||||||||||||||| |||| ||| ||| || ||||||||||||    
T  34429681 ttggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtcctttta 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 36196629 - 36196553
Alignment:
Q  251 acttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||| ||  | || ||| ||||||||||||||||| ||||||| || |||||| ||||||||    
T  36196629 acttttggtccttttagtttgaca--attttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtt 36196553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 345
Target Start/End: Complemental strand, 5117156 - 5117052
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    |||||||||||| |||| ||| |||||||||  ||||| |   ||||||||  ||||||| || ||||||||||||| ||| ||||||||||||||  ||    
T  5117156 ggtcaaataccattttttgtctttttagtttcacagaattcataagttagtg-tttaagtatcgaaagttttaaatatgtctttttagttgataaattat 5117058  T
Q  340 ttcacc 345  Q
    ||||||    
T  5117057 ttcacc 5117052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 29191781 - 29191817
Alignment:
Q  157 tgaaaattgctcttctcccatttggttttgctcattc 193  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29191781 tgaaaattgctcttctcccatttgtttttgctcattc 29191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 13315863 - 13315808
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaag 298  Q
    |||| |||| ||||| ||||||||||||| || || ||||||||||||||||||||    
T  13315863 caaagaccatttttgatccttttagtttgacataatttccaagttagtcctttaag 13315808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 16781110 - 16781044
Alignment:
Q  257 ggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtcctt 323  Q
    ||||||||||||||| || |||||| |||||||||||||||| |||||||||||| || |||| ||||    
T  16781110 ggtccttttagtttgaca-aaattcacaagttagtcctttaaatttcaaaagtttcaattaggccctt 16781044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 37543014 - 37543057
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||| || || |||||||||||||||||||||||||||    
T  37543014 ttttagtttgacataatttccaagttagtcctttaagtttcaaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 41265380 - 41265313
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||||| ||||||| |||||||||||||  |||| |  |||||||||| |||||||||| |||||||    
T  41265380 caaatacaacttttgatccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagttt 41265313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 14994749 - 14994783
Alignment:
Q  161 aattgctcttctcccatttggttttgctcattccc 195  Q
    |||||||||||||||||||| ||||||||||||||    
T  14994749 aattgctcttctcccatttgtttttgctcattccc 14994783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 329
Target Start/End: Original strand, 21813295 - 21813325
Alignment:
Q  299 tttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||||||||||||    
T  21813295 tttcaaaagttttaaataggtccttttagtt 21813325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 27893136 - 27893182
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||| ||||||||| ||||||||||||||| |||||| |||||||    
T  27893136 aagtttcaaataggtctttttagttgataaactatttcaacgttacc 27893182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 30907350 - 30907316
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaata 316  Q
    ||||||||||||||||||||||||||||| |||||    
T  30907350 caagttagtcctttaagtttcaaaagtttcaaata 30907316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 34429743 - 34429793
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaag 307  Q
    |||||||||| ||||  |||| |||||||||| ||||||||||||||||||    
T  34429743 ggtccttttaatttgaaagaatttccaagttaatcctttaagtttcaaaag 34429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 39301404 - 39301472
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||||||||||||| ||||| || |||||||||||| ||| || ||| ||||| |||||||| |||||    
T  39301404 caagttagtcctttaa-tttcataaattttaaataggttcttgtaattgttaaactatttcaccattacc 39301472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 921203 - 921167
Alignment:
Q  293 tttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  921203 tttaagtttcaaaagtcttaaataagtccttttagtt 921167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 11871888 - 11871828
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagttt 301  Q
    ||||||||| |  |||||||||||||||||| ||||| |||||||  ||||| ||||||||    
T  11871888 gtcaaatactatgtttggtccttttagtttgacagaatttccaagccagtccgttaagttt 11871828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 19080615 - 19080703
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||| |||||||| |||||||| | ||||| | |  | ||| ||||||||||||  ||||||| || |||||| ||||||||    
T  19080615 gtcaaataccatttttggtcattttagttcgacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtt 19080703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 39301945 - 39301889
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaa 313  Q
    |||||||||||||||  |||| ||  ||||||||||||||| ||| |||||||||||    
T  39301945 ggtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaa 39301889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18967733 - 18967578
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||| | |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| ||||||||||||||||| ||||    
T  18967733 tgcaacatgtcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgccttgctaca 18967635  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaattccat 157  Q
    |||||| ||||||||| || ||||||| | |||||||||||||| ||||||||||||    
T  18967634 aaagtgtctttaccaatcacaatattgggcttggatcatcatttgggccaattccat 18967578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 9901958 - 9902058
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  9901958 ttttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagttgataaactatttcatcgttaccc 9902057  T
Q  353 c 353  Q
    |    
T  9902058 c 9902058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 20575401 - 20575487
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20575401 caaataccactattggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtt 20575487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 17180199 - 17180104
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||| || || || |||||||||||||||||||| |||||||| |||||| || ||||||||||||||| ||||||||||||||||    
T  17180199 gtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagttgataaactatttcaccgttacccc 17180104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 32417774 - 32417684
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||||| |||||| || || ||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  32417774 ggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaactatttcaccgt 32417684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 32423615 - 32423525
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||||| |||||| || || ||| ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  32423615 ggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaactatttcaccgt 32423525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 20575475 - 20575559
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaattt 341  Q
    |||||||||||||||  |||| ||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||| ||||    
T  20575475 ggtccttttagtttgatagaatttccaagttagtcctttaagttttaaaagtttcaaataggtcatttcagttgataaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 9902403 - 9902314
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| || ||||||| ||||||||||| ||||| || |||||||||| |||||||||| |||||||||| || ||||||||||||    
T  9902403 ggtcaaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtt 9902314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 11527526 - 11527611
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||| |||| || || | | |||||||||||||||||||| ||||||| || |||||||||||||||    
T  11527526 aaataccacttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 11527611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 16168829 - 16168740
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||| || |||||||||| ||||| |||||| |||||| ||||||||||  |||||| || |||||||||||||||    
T  16168829 ggtcaaataccacttttgatctttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtt 16168740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 350
Target Start/End: Original strand, 17179687 - 17179780
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    ||||| |||||||||  |||| || |||||||||||||||| |||||||| ||| |||||||||||||||||||||||   |||||||||||||    
T  17179687 ggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagttgataagtcatttcaccgttac 17179780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 32417459 - 32417544
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| || ||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||| || ||| ||||||||    
T  32417459 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtt 32417544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 32423300 - 32423385
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| || ||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||| || ||| ||||||||    
T  32423300 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtt 32423385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 10862612 - 10862552
Alignment:
Q  293 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  10862612 tttaaatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 10862552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 11528102 - 11528013
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    ||||||||||| || || | |||| ||| ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||| |||||    
T  11528102 cttttagtttgacataagtcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 11528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 32417537 - 32417604
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| || || || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtt 32417604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 32423378 - 32423445
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| || || || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtt 32423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 2839615 - 2839697
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||| ||||||||||||||||| ||||  |||| |  |||||||||| |||||||||||||||||| || ||||||||||||    
T  2839615 aaatatcacttttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtcctttta 2839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 10962830 - 10962896
Alignment:
Q  286 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||||||||| |||||||| ||||| ||| ||||||||||||||| |||| ||||||||||    
T  10962830 ttagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaactattttaccgttaccc 10962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 16168454 - 16168540
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||||||||||  |||| |  || |||||||||||||||||  ||||||| || |||||| ||||||||    
T  16168454 caaataccacttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtt 16168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 20575658 - 20575600
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 315  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||||    
T  20575658 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 353
Target Start/End: Original strand, 10407308 - 10407408
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaa-gttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||| |||||||||||||| || ||||||| | |||| | ||||||||||||||||||| ||||| ||| ||||||||||||||  ||||||| ||||||    
T  10407308 ttttagtccttttagtttgaca-aaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactgttacc 10407406  T
Q  352 cc 353  Q
    ||    
T  10407407 cc 10407408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 16168528 - 16168607
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 345  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||| ||||||||    
T  16168528 ggtcattttagtttgacagaatttccaagttagtcctttaagtttc---------aaataggtccttttagttgataaactatttcacc 16168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 17131620 - 17131684
Alignment:
Q  293 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctgt 357  Q
    |||||||||||||||||||||||| ||| ||||||||||||||  ||||||| ||||||| ||||    
T  17131620 tttaagtttcaaaagttttaaatatgtcattttagttgataaattatttcactgttaccctctgt 17131684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23014999 - 23015110
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||||| |||||||||||||||||||  | | |||| |||||| ||||| ||||||| || ||||||||| |||| |||||||| ||  |||||||||    
T  23014999 tgcaacttgtcaatgcatgcaactatcctatataccactttgcataacatt-agaaatgtaacttgtcttacatgcaccatggacacgtttcttgttaca 23015097  T
Q  101 aaagtggctttac 113  Q
     |||||| |||||    
T  23015098 taagtggttttac 23015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 32417593 - 32417649
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaa 314  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||    
T  32417593 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 32423434 - 32423490
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaa 314  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||||    
T  32423434 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32423490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 10862720 - 10862637
Alignment:
Q  246 ataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| |||||||||||||||||| ||||| |  ||||||||||||||||||||  ||||||| || || ||| ||||||||    
T  10862720 ataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtt 10862637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 24139568 - 24139473
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||  |||| |  || |||||||||||||||||||||| ||| ||||| ||| ||||||||||||||  ||||||| || |||||    
T  24139568 gtccttttagtttgatagaattatcaggttagtcctttaagtttcaaaaatttcaaataagtctttttagttgataaattatttcactgtaacccc 24139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 11528180 - 11528094
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| || ||||||||||| |||||| | ||| || |||||||||||||||||||| |||||||| |||||  | |||||||||    
T  11528180 caaatacaacgtttggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtt 11528094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 20575780 - 20575696
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| |||||||| |||||||||| ||||| |  |||||||||  |||||||||| ||||||||||||| ||||||||||||    
T  20575780 caaataccatttttggtc-ttttagtttgacagaattctcaagttagtt-tttaagtttcgaaagttttaaataagtccttttagtt 20575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 32417848 - 32417762
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||| || |||||||||  ||||| | |||||||||| |||||| |||| ||||||| || |||||||||| ||||    
T  32417848 caaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtt 32417762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 32423689 - 32423603
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||| || |||||||||  ||||| | |||||||||| |||||| |||| ||||||| || |||||||||| ||||    
T  32423689 caaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtt 32423603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 2840186 - 2840101
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||| |||||||||||||||||  || || |  |||||||||| ||||||||||||||||||  ||||| |||||||||||    
T  2840186 aaatatcacgtttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtt 2840101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 11527599 - 11527686
Alignment:
Q  257 ggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||         |||||| ||||||||||||||| ||||||||||||||||    
T  11527599 ggtccttttagtttgaca-aaattcacaagttagtcctttaagtttcaaa---------taggtcattttagttgataaactatttcaccgttacccc 11527686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 16168752 - 16168680
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||| ||||| |  ||||||||||  ||| ||||||||||||| ||||||||| ||||||||    
T  16168752 ggtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtt 16168680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 9946716 - 9946679
Alignment:
Q  316 aggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9946716 aggtccttttagttgataaactatttcaccgttacccc 9946679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 28630632 - 28630591
Alignment:
Q  312 aaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  28630632 aaataggtccttttagttgataaactatttcacctttacccc 28630591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 2840074 - 2840030
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||    
T  2840074 aagtttcaaataggtcattttagttgataaactatttcaccgtta 2840030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 10407817 - 10407709
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttc-aaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||| || ||||| ||||||||||||  | ||| |  |||||||||| || ||||||  |||||||| ||||| ||| ||||||||||||||| |||||    
T  10407817 aaatatcatttttgatccttttagtttaacggaattctcaagttagtcattcaagtttttaaaagtttcaaatatgtcattttagttgataaactatttc 10407718  T
Q  343 accgttacc 351  Q
    || ||||||    
T  10407717 actgttacc 10407709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 17132251 - 17132183
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    ||||||| |||||||||||||||||| || ||||| ||| | |||||| |||||| |||| ||||||||    
T  17132251 caagttaatcctttaagtttcaaaagattcaaataagtcatattagtttataaactattttaccgttac 17132183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 10963209 - 10963162
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||  ||||| |||||||||||||||||||||| ||||||||    
T  10963209 caagttagttttttaaatttcaaaagttttaaataggtcattttagtt 10963162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 24139600 - 24139557
Alignment:
Q  286 ttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||| |||||||||| || ||||||||||||    
T  24139600 ttagtcctttaagtttcgaaagttttaattaagtccttttagtt 24139557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 7477028 - 7477061
Alignment:
Q  162 attgctcttctcccatttggttttgctcattccc 195  Q
    |||||||||||||||||||||||| |||||||||    
T  7477028 attgctcttctcccatttggttttactcattccc 7477061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 7477394 - 7477427
Alignment:
Q  162 attgctcttctcccatttggttttgctcattccc 195  Q
    |||||||||||||||||||||||| |||||||||    
T  7477394 attgctcttctcccatttggttttactcattccc 7477427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 7477760 - 7477793
Alignment:
Q  162 attgctcttctcccatttggttttgctcattccc 195  Q
    |||||||||||||||||||||||| |||||||||    
T  7477760 attgctcttctcccatttggttttactcattccc 7477793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 7271654 - 7271686
Alignment:
Q  161 aattgctcttctcccatttggttttgctcattc 193  Q
    |||||||||||||||||||| ||||||||||||    
T  7271654 aattgctcttctcccatttgtttttgctcattc 7271686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 16168692 - 16168644
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||| |||||||||| | ||||| ||||||||||| |||||||||||||    
T  16168692 ggtctttttagtttgactgaaatcccaagttagtcttttaagtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 28630749 - 28630685
Alignment:
Q  246 ataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||||||||||||||||||||||||| || || | | ||||||||  |||||||||  |||||||    
T  28630749 ataccacttttggtccttttagtttgacataattcctaagttagttttttaagttttgaaagttt 28630685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 24671487 - 24671642
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||| | |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| |||||||||||| |||| ||||    
T  24671487 tgcaacatgtcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgtcttgctaca 24671585  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaattccat 157  Q
    |||||||||||||||| || ||||||| | |||||||||||||| ||||||||||||    
T  24671586 aaagtggctttaccaatcacaatattgggcttggatcatcatttgggccaattccat 24671642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 4578931 - 4578785
Alignment:
Q  10 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 109  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| ||| |||||||| |||| |||||||||||||    
T  4578931 tcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatcgacatgtgtcttgctacaaaagtggct 4578833  T
Q  110 ttaccaaacataatattgagtttggatcatcatttaggccaattccat 157  Q
    ||||||| || ||||||| | |||||||||||||| |||||| |||||    
T  4578832 ttaccaatcacaatattgggcttggatcatcatttgggccaactccat 4578785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34489733 - 34489875
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||||| ||||||||||||||| ||||||||||||| || | |||||| || |||||||| ||||||||| |||| |||||||| ||| |||||||||    
T  34489733 tgcaacttgtcaatgcatgcaactgtccactttgccacttttccttacat-gaaaaatgcaacttgtcttacatgcaccatggacacgtgtcttgttaca 34489831  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcattt 144  Q
    ||||||||||||| |   | ||||||| | ||||||||||||||    
T  34489832 aaagtggctttacgagttacaatattgggattggatcatcattt 34489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 330
Target Start/End: Complemental strand, 31247779 - 31247692
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttg 330  Q
    |||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  31247779 caaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttg 31247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34523197 - 34523339
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||||| ||||||||||||||| ||||||||||||| |||| ||||| ||| |||||||| ||||||||| |||| | |||||| ||| | |||||||    
T  34523197 tgcaacttgtcaatgcatgcaactgtccactttgccactttgccttaca-tgaaaaatgcaacttgtcttacatgcaccttggacaggtgtcctgttaca 34523295  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcattt 144  Q
    |||||||||||||||   | ||||||||| || || ||||||||    
T  34523296 aaagtggctttaccagttacaatattgagcttcgagcatcattt 34523339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 24707457 - 24707558
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    ||||| ||||||| |||||||||||||  ||||| |||||||||||||||||||||||  |||||||||||||  || ||||||||||||||| ||||||    
T  24707457 aaatatcactttttgtccttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagttgataaactatttca 24707556  T
Q  344 cc 345  Q
    ||    
T  24707557 cc 24707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 21376633 - 21376723
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||||||||  |||| || || ||| |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  21376633 cttttagtttgatagaattttcaggttggtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacc 21376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34470091 - 34470231
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||||| |||||||| |||||| ||||||||||||| |||| || ||| || |||||| | |||| |||| |||| |||| ||||||| |  ||||||    
T  34470091 tgcaacttgtcaatgcacgcaactgtccactttgccactttgctttgcat-gaaaaatgctacttgtgttacatgcaccatgtacatgtgtcaagttaca 34470189  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcat 142  Q
    |||||||| ||||||| |||||||||| |||| |||||||||    
T  34470190 aaagtggccttaccaatcataatattgggttttgatcatcat 34470231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 347
Target Start/End: Original strand, 54456657 - 54456764
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||| || |||||| |||||||||| ||||||| ||||| ||| ||||||||||||||| |     
T  54456657 ggtcaaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaatatgtcattttagttgataaactaa 54456756  T
Q  340 ttcaccgt 347  Q
    ||||||||    
T  54456757 ttcaccgt 54456764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 31247705 - 31247609
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||| | ||||| | |||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||  |||||||  |||||||    
T  31247705 ggtccttttagttggacagaattcccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcactattacccc 31247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 50530232 - 50530321
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| || ||||| ||||||||||||| ||||| || ||| |||||| |||||||||||||||| |||| |||||| ||||||||    
T  50530232 ggtcaaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtt 50530321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 4276226 - 4276294
Alignment:
Q  285 gttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||||||||| ||||||| ||||||||    
T  4276226 gttagttctttaagtttcaaaagtttcaaatagttcattttagttgataaactatttcactgttacccc 4276294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 353
Target Start/End: Original strand, 14629274 - 14629375
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||||| || ||||||||||||| |||| ||||| | ||||||||||||||||||||||         |||||||| |||||||||||||||  |||||    
T  14629274 caaatactacgtttggtccttttactttgacagaattcccaagttagtcctttaagtttc---------aaataggttcttttagttgataaattatttc 14629364  T
Q  343 accgttacccc 353  Q
    |||||||||||    
T  14629365 accgttacccc 14629375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 21377134 - 21377048
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| ||| |||||||||||||||||| ||||| |||||||||| | |||||| |||| ||||||| || |||||| ||||||||    
T  21377134 caaataacacgtttggtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtt 21377048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 21410380 - 21410273
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaa-taggtccttttagttgataaacaatttc 342  Q
    |||||| | |||| |||||||||  ||| ||||| |||||||| | || |||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  21410380 aaatactaatttttgtccttttaacttgacagaa-ttccaagtcaatcatttaagtttcaaaagttttaaattatgtcattttagttgataaactatttc 21410282  T
Q  343 accgttacc 351  Q
    || ||||||    
T  21410281 actgttacc 21410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 31247192 - 31247282
Alignment:
Q  259 tccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    ||||||||||||| || |||||| |||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||| |||| || |||||    
T  31247192 tccttttagtttgaca-aaattctcaagttagtc-tttaagtttcaaaagtttcaaataagtcctattagttgataaactattttactgttac 31247282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 3087070 - 3087156
Alignment:
Q  242 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| ||| ||| ||||||||| ||||  |||| || |||||||||| ||||||||||||||||||||||||  |||||||||||    
T  3087070 tcaaataacacatttagtccttttaatttgatagaattttcaagttagtc-tttaagtttcaaaagttttaaataaatccttttagtt 3087156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 27630585 - 27630728
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||||| ||||||||| ||||| |||||||||||        |||||| || |||||||| ||||||||| |||| | |||||||||  |||||||||    
T  27630585 tgcaacttgtcaatgcatacaactgtccactttgcc--------ttacat-gaaaaatgcaacttgtcttacttgcaccttggacatgtatcttgttaca 27630675  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaatt 153  Q
    ||| |||||||||||   | ||||||| | |||||||||||||| ||| ||||    
T  27630676 aaattggctttaccagttacaatattgggcttggatcatcatttgggcaaatt 27630728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 35556048 - 35555987
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||| |||||||||||||||||||||| || || | |||||||| ||||||||||||||||    
T  35556048 aaatagcacttttggtccttttagtttggcaaaattcccaagttaatcctttaagtttcaaa 35555987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 54456856 - 54456803
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||||||||| |||| || || ||||||||||||||||||||||||||||||||    
T  54456856 ggtccttttaatttgacataatttccaagttagtcctttaagtttcaaaagttt 54456803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 3088218 - 3088142
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||| ||||| || ||||||| | |||||| |||| ||||||| || || ||||||||||||    
T  3088218 ttttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtt 3088142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 21377032 - 21376984
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||||||    
T  21377032 aagtttcaaataggtccttttagtttataaactatttcaccgttacccc 21376984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 53782953 - 53783005
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtccttt 295  Q
    |||||| |||||||||||||||||||||| ||||| | |||||||||||||||    
T  53782953 caaataacacttttggtccttttagtttggcagaattcccaagttagtccttt 53783005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 5505800 - 5505729
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtccttt-aagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| ||||| || || ||| || |||||||||| |||||||||||||||||||||| |||||||||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagtt 5505729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 350
Target Start/End: Original strand, 19153864 - 19153974
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaa 338  Q
    ||||||| ||| ||||| ||| |||||||||| ||||| ||  |||||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||  |    
T  19153864 ggtcaaacacctcttttagtc-ttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaatatgtctttttagttgataaatta 19153962  T
Q  339 tttcaccgttac 350  Q
    |||||| |||||    
T  19153963 tttcactgttac 19153974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 35555595 - 35555682
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    |||||||||| ||||| |  ||||||||||| |||| |||  ||||||| |||||  || ||||||||||||||| ||||||||||||    
T  35555595 ttttagtttgacagaattatcaagttagtccattaaattttgaaagtttcaaataaatcattttagttgataaactatttcaccgtta 35555682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 54456912 - 54456847
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    |||||||||||  |||| |||||| ||| ||| |||||| |||||||||| |||||||||||||||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtcctttta 54456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Complemental strand, 3088115 - 3088071
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||    
T  3088115 aagtttcaaataggtccttttaattgataaactatttcaccgtta 3088071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 49559576 - 49559492
Alignment:
Q  239 tggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctt 323  Q
    |||||||||||| ||||| |||||||||||||| || || | ||| | |||||||||| ||||   |||||| ||||||||||||    
T  49559576 tggtcaaatacctcttttagtccttttagtttgacaaaagtaccagggtagtcctttaggtttttcaagtttcaaataggtcctt 49559492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 4276672 - 4276629
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||| ||||| | |||||||||||||||||||||||||    
T  4276672 ttttagtttgacagaattcccaagttagtcctttaagtttcaaa 4276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 14964737 - 14964784
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||||||| ||||| || |||||||||| |||||||||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 50530460 - 50530397
Alignment:
Q  242 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||| ||||| ||||||||||||  |  || ||| |||||||||||||||||||||||    
T  50530460 tcaaataccatttttgatccttttagtttcacttaatttctaagttagtcctttaagtttcaaa 50530397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 19664436 - 19664477
Alignment:
Q  288 agtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||| | ||||| ||||||||||||    
T  19664436 agtcctttaagtttcaaaagtctcaaataagtccttttagtt 19664477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 13712077 - 13712117
Alignment:
Q  290 tcctttaagtttcaaaagttttaaataggtccttttagttg 330  Q
    ||||||||||||| ||||||| ||||||||||||| |||||    
T  13712077 tcctttaagtttctaaagtttcaaataggtcctttaagttg 13712117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 35545593 - 35545565
Alignment:
Q  243 caaataccacttttggtccttttagtttg 271  Q
    |||||||||||||||||||||||||||||    
T  35545593 caaataccacttttggtccttttagtttg 35545565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 27687 - 27842
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||| | |||||||||||||  ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| |||||||||||| |||| ||||    
T  27687 tgcaacatgtcaatgcatgcaagcatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgtcttgctaca 27785  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaattccat 157  Q
    |||||||||||||||| || ||||||| | |||||||||||||| ||||||||||||    
T  27786 aaagtggctttaccaatcacaatattgggcttggatcatcatttgggccaattccat 27842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 29508 - 29629
Alignment:
Q  32 ttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatattgagtt 131  Q
    |||||||| ||||||||||  |||||||||| ||||||||| |||| ||| |||||||| |||| |||||||||||||||||||| |  ||||||| | |    
T  29508 ttgccaccatgcattacata-agaaatgcaacttgtcttacatgcaccatagacatgtgtcttgctacaaaagtggctttaccaatcgcaatattgggct 29606  T
Q  132 tggatcatcatttaggccaattc 154  Q
    ||||||||||||| |||||||||    
T  29607 tggatcatcatttgggccaattc 29629  T

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Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 10427129 - 10426974
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||| | |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||| ||| | |||| |||| ||||||| |||| ||||    
T  10427129 tgcaacatgtcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgcctttcatgcaccatgaacatgtgtcttgctaca 10427031  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaattccat 157  Q
    |||||||||||||||| || |||||||  ||||||||||||||| ||||||||||||    
T  10427030 aaagtggctttaccaatcacaatattggatttggatcatcatttgggccaattccat 10426974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 350
Target Start/End: Original strand, 52567730 - 52567839
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatt 340  Q
    |||||||| ||| |||||||||||||||||| ||||| |   ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||    
T  52567730 gtcaaatatcacgtttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatt 52567829  T
Q  341 tcaccgttac 350  Q
    |||| |||||    
T  52567830 tcactgttac 52567839  T

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Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 5387194 - 5387285
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||| ||||| | ||||||||| |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  5387194 ttttagtttgacagaattcccaagttagccctttaagtttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttacccc 5387285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 42116143 - 42116047
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    ||||||||| |||||||| |||||||||| || || ||  |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  42116143 caaataccatttttggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtctttttaattgataaacaat 42116047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 52181779 - 52181872
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||| | ||| ||||| ||||||||| ||||||||||||||    
T  52181779 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaacatgtcattttaattgataaactatttcaccgttacc 52181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 19632323 - 19632212
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    |||||||||| | ||||||||||||||||||| ||||| |  ||| |||||| |||||||||||||||||||||||| ||| ||||||||||||||| |     
T  19632323 ggtcaaatacgatttttggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagttgataaactac 19632225  T
Q  340 ttcaccgttaccc 352  Q
    ||||| |||||||    
T  19632224 ttcactgttaccc 19632212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 43098169 - 43098257
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||  ||||||| || |||||||||||||||    
T  43098169 gtcaaataccacttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtt 43098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 352
Target Start/End: Complemental strand, 8408917 - 8408826
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||| ||||| || |||||||||| |||||||||||||||||| ||||||||| | ||||||||||||| ||||||||| |||||    
T  8408917 cttttagtttgacagaattttcaagttagtcatttaagtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccgctaccc 8408826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 26330008 - 26329921
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 344  Q
    ||||||||||||||| || || | ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  26330008 ggtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtcattttagttgataaactatttcac 26329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 351
Target Start/End: Original strand, 31229318 - 31229412
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||| ||||||||||  |||| |  |||||||||| |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  31229318 ggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagttgataaactatttcaccgttacc 31229412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 26330066 - 26329996
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||  ||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 26329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 41735814 - 41735887
Alignment:
Q  256 tggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||  || || | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41735814 tggtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 41735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 43098546 - 43098461
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| ||||||||||||||||||| ||||| ||| || ||||| ||||||||||| ||||||| || |||||||||||||||    
T  43098546 aaataccatttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtt 43098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 2508252 - 2508349
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    |||||| | ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||  ||| || |||||||||||| ||||||    
T  2508252 aaatactatttttgatccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat--gtcattctagttgataaaccatttca 2508349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 2789036 - 2788964
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  2789036 ggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 2788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 52568256 - 52568161
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||| ||||||||||  |||| |  ||||| ||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||    
T  52568256 ggtcattttagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaaatagatcc-tttagttgataaactatttcaccgttacccc 52568161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 347
Target Start/End: Complemental strand, 36890721 - 36890618
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    ||||| |||||||  ||||||||||||| ||||| ||  |||||| || ||||||||| ||||||||  |||||||| ||||||||||||||| ||||||    
T  36890721 aaatatcacttttaatccttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttca 36890622  T
Q  344 ccgt 347  Q
    ||||    
T  36890621 ccgt 36890618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 2788776 - 2788865
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||  |||||||||||||   ||||||| ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  2788776 ggtcaaataccacttttaatccttttagtttgat-gaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 2788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 26330142 - 26330056
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||| |||||||||||||| ||||| |  ||||||||||||||||||||  ||||||| || ||| |||||||||||    
T  26330142 caaataccacttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagtt 26330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 43098473 - 43098401
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||| || || | |||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  43098473 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtt 43098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 44915933 - 44915997
Alignment:
Q  289 gtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||| ||||||||    
T  44915933 gtcctttaagtttcaaaagttttaaaaaggtctttttagttgataaattatttcactgttacccc 44915997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 19631752 - 19631838
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| ||| ||||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  19631752 caaatatcacgtttggtccttttattttgaca-aaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 19631838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 42115660 - 42115727
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| | |||||| ||||||| ||||    
T  42115660 caagttagtcctttaagtctcaaaagttttaaataagtccttttagataataaactatttcacggtta 42115727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 52865940 - 52866031
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||||||||||||| |||||||||||||| ||||| |  ||||||||||||||||||||  ||||||| || || || |||||||||    
T  52865940 ttggccaaataccactttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtt 52866031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 52866441 - 52866366
Alignment:
Q  231 aaaaatgttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 306  Q
    |||||| ||| ||||||||||  |||||| ||||||||||| ||||| | ||||||||||||||||||||||||||    
T  52866441 aaaaatattgttcaaataccatgtttggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 347
Target Start/End: Original strand, 22025116 - 22025206
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||| |||||||||| ||||| |   |||||||||| ||||| || |||||||| |||||||| |||||||||||||||| ||||||||||    
T  22025116 ggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaactatttcaccgt 22025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 52183558 - 52183473
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| |||||||||||||||||  || |||||| ||||||||||||||||||||| ||||||| || |||| ||||||||||    
T  52183558 aaataccacgtttggtccttttagttttaca-aaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtt 52183473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 26329826 - 26329879
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  26329826 ggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagttt 26329879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 2508730 - 2508678
Alignment:
Q  283 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 335  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  2508730 aagttactcctttaaatttcaaaagttttaaatatgtccttttagttgataaa 2508678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 8408407 - 8408497
Alignment:
Q  259 tccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    ||||||||||||| || |||||| ||||| |||| ||||||||| |||||||| ||||| ||| ||||||||||||| | ||||||||||||    
T  8408407 tccttttagtttgaca-aaattctcaagtaagtcttttaagtttgaaaagtttcaaataagtcattttagttgataagctatttcaccgtta 8408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 8408337 - 8408402
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||||||| ||  |||||||||||||||||| || || |||||||||||| ||||||||||||||    
T  8408337 ggtcaaatatcaagtttggtccttttagtttgacaaaatttccaagttagttctttaagtttcaaa 8408402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 35024016 - 35023955
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    |||||||||| ||||||||| ||||||||| ||| | |||||||||||||||||| ||||||    
T  35024016 caagttagtcttttaagttttaaaagtttttaattgatccttttagttgataaactatttca 35023955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 35046603 - 35046550
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 315  Q
    |||||||||| || || | |||||||||||||||||||||||||||||||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 344
Target Start/End: Original strand, 43098280 - 43098328
Alignment:
Q  296 aagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 344  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  43098280 aagtttcaaaagtttcaaataagtccttttagttgataaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 28947099 - 28947029
Alignment:
Q  159 aaaattgctcttctcccatttggttttgctcattccccttttacttttgtgccta--tgagctaactcacg 227  Q
    ||||||||||||||||  |||| ||||||| || |||||||||||||||||||||  |||| |||||||||    
T  28947099 aaaattgctcttctcctttttgcttttgcttatcccccttttacttttgtgcctacgtgagttaactcacg 28947029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 22025436 - 22025350
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| |||||| ||| |||||||||| || || |  ||||||||||||| ||||||| ||||||| || ||||| |||||||||    
T  22025436 caaatacaacttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtt 22025350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 23085340 - 23085275
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||| || ||||||| ||||||||||| ||||||||  |||||||| |||||||||||||||||||    
T  23085340 aaatatcatttttggttcttttagtttgacagaaattttaagttagt-ctttaagtttcaaaagttt 23085275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 35046437 - 35046503
Alignment:
Q  263 tttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| || || || ||| ||||||||||||||||| |||||||||| ||| |||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtt 35046503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 41736012 - 41735958
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaa 297  Q
    ||||||||||||||| ||||||||||||| ||||| | |||||||||| ||||||    
T  41736012 caaataccacttttgatccttttagtttgacagaattcccaagttagtactttaa 41735958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 44916386 - 44916324
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||  ||||| |||||||||||||| || || || ||||||||||||||||||||||||    
T  44916386 caaatacatcttttagtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 19681283 - 19681348
Alignment:
Q  288 agtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||| | |||| | || ||||||||| ||||||||||||||| |||||||| |||||||    
T  19681283 agtcctttaaggtgcaaaggattcaaataggtcattttagttgataaactatttcaccattacccc 19681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 22025055 - 22025100
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagtta 288  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  22025055 caaataccacttttggtccttttagtttgacagaattcccaagtta 22025100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 8409000 - 8408936
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttc 302  Q
    ||||||||||| ||||||||||| |||||||||| || || |  |||||||||| ||||||||||    
T  8409000 ttggtcaaatatcacttttggtcattttagtttgacataattctcaagttagtcatttaagtttc 8408936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 22025358 - 22025291
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||| ||||| | |||||||||||||||||| |||||| |||| ||||||||  ||||||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaag-ttcaaaggtttcaaataggtaattttagtt 22025291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 41735875 - 41735923
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  41735875 ggtccttttagtttgacagaatttccaagtcagtcctttaaatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 5387131 - 5387182
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||| ||||||||    
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagttt 5387182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 19631869 - 19631916
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||| ||||||||| ||||||||||||||| |||| ||||||||||    
T  19631869 aagtttcaaataggtcattttagttgataaactattttaccgttaccc 19631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 35046493 - 35046544
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||||||||||| ||||| | | || |||||||||||||||||||||||||    
T  35046493 tccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagttt 35046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 352
Target Start/End: Original strand, 52866058 - 52866105
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  52866058 aagtttcaaataggtcattttagttgataaactatttcagcgttaccc 52866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 9319996 - 9320085
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| ||||||| || ||||||||||| || |||||| |||||||||  |||||||||| ||||||| || || || |||||||||    
T  9319996 ggtcaaataacacttttcgttcttttagtttgaca-aaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtt 9320085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 31617681 - 31617640
Alignment:
Q  288 agtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||| ||| | ||||||||||||    
T  31617681 agtcctttaagtttcaaaagtttcaaacaagtccttttagtt 31617640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 40422049 - 40422009
Alignment:
Q  155 catgaaaattgctcttctcccatttggttttgctcattccc 195  Q
    ||||||||||||||||||||| || | ||||||||||||||    
T  40422049 catgaaaattgctcttctccctttcgtttttgctcattccc 40422009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 52568320 - 52568244
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| ||| |||||||||| || || | |||| ||||| |||||| |||||||||||| || |||||| ||||||||    
T  52568320 ttttagtcattttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtt 52568244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 16159 - 16272
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    ||||||||| | ||||||||||||||||||||  | || |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  16159 ggtcaaatatctcttttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagttgataaactat 16258  T
Q  340 ttcaccgttacccc 353  Q
    ||||||||||||||    
T  16259 ttcaccgttacccc 16272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 349
Target Start/End: Complemental strand, 16684 - 16576
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    ||||||||| | ||||||||| |||| |||||  | || |||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||| ||    
T  16684 ggtcaaatatctcttttggtcttttt-gtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagttgataaactat 16586  T
Q  340 ttcaccgtta 349  Q
    ||||| ||||    
T  16585 ttcacagtta 16576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 36418461 - 36418364
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccc 354  Q
    ||||||||||||||| || || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  36418461 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttaccccc 36418364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 32459413 - 32459525
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaa 338  Q
    ||||||||| || ||||||||||||||||||| || |||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  32459413 ggtcaaatagcagttttggtccttttagtttgaca-aaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaacta 32459511  T
Q  339 tttcaccgttaccc 352  Q
    |||||| |||||||    
T  32459512 tttcactgttaccc 32459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 6336133 - 6336218
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6336133 aaataccattttcggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtt 6336218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 18951287 - 18951378
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||||| ||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18951287 ttggccaaataacacatttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 18951378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 18238412 - 18238306
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    ||||||| |||||| || ||| |||||| || || ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  18238412 aaatacctcttttgatcttttaagtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagttgataaattatttca 18238313  T
Q  344 ccgttac 350  Q
    |||||||    
T  18238312 ccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 20728514 - 20728603
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||| || || |||||||||||||||    
T  20728514 ggtcaaataccacttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtt 20728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 20729103 - 20729010
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||||| ||||| || |||||||||||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  20729103 tccttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattaccc 20729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 18249022 - 18249117
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||  ||||| |  |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  18249022 gtccttttagtttaacagaattctcaagttagtcatttaagtttcaaaagttttaaataggtctttttagttgataaactatttcatcgttacccc 18249117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 35891335 - 35891226
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    |||||| ||||||| ||||||||||||| || || || ||||||||||||||||||||||||||||| ||||| ||  |||| |||||||||| ||||||    
T  35891335 aaatacaacttttgatccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagttttttttgttgataaactatttca 35891236  T
Q  344 ccgttacccc 353  Q
     |||||||||    
T  35891235 gcgttacccc 35891226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 5735040 - 5734946
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||  ||||| |  ||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||||| |||||||    
T  5735040 gtccttttagtttaacagaattctcaagttagtcctttaagtt-caaaagtttcaaataggtcattttagttgataaactatttcaccattacccc 5734946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 18237919 - 18238010
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||| ||||| ||  |||||| |||||||||||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagttgataaaatatttcactgttaccc 18238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 20728591 - 20728686
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||||||  ||||| |  |||||||||||||||||||| |||||||| ||||| ||| |||||||||| |||| |||||||||||||||    
T  20728591 ggtccttttagtttaacagaattctcaagttagtcctttaagttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttaccc 20728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 353
Target Start/End: Complemental strand, 26276074 - 26275973
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||         ||||| ||||||||||||||||| | |||||    
T  26276074 caaataccacttttgatccttttagtttgacaaaatttccaagttagtcctttaagtttc---------aaatatgtccttttagttgataagctatttc 26275984  T
Q  343 accgttacccc 353  Q
    |||||||||||    
T  26275983 accgttacccc 26275973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 32459929 - 32459822
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    ||||||||||||| |||||||| ||||| | ||| |  ||| |||||| ||||||||| |||| ||| ||||||||||||||||| ||||||| ||||||    
T  32459929 aaataccacttttagtccttttcgtttgaccgaattctcaaattagtcttttaagttttaaaaatttcaaataggtccttttagtcgataaactatttca 32459830  T
Q  344 ccgttacc 351  Q
    | ||||||    
T  32459829 ctgttacc 32459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 6336384 - 6336298
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||| |||||||||| | | ||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||| ||||||||||    
T  6336384 cttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgataaactatttcaccgt 6336298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 26275494 - 26275579
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||| |||||| ||||||||||| ||||| ||| |||||||| ||||||||||||||||||| |||||| || ||||||||    
T  26275494 aaatatcacgtttggtacttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtt 26275579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 31814020 - 31813955
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||||||||||| |||||||||||||||||| ||||| | ||||||||||| |||||||||||||    
T  31814020 ggtcaaataccacgtttggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaa 31813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 1722489 - 1722575
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||  |||||||||||||||||  || |||||| |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  1722489 caaataccatgtttggtccttttagtttaaca-aaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtt 1722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 353
Target Start/End: Complemental strand, 1723034 - 1722940
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||  || || ||| ||||||||  ||||||||| ||||||||||||||  || ||||||||||||||| ||||||| ||||||||    
T  1723034 tccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagttgataaactatttcactgttacccc 1722940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 13543179 - 13543241
Alignment:
Q  286 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtt 348  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||  |||||||||||    
T  13543179 ttagtcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcaccgtt 13543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 14235557 - 14235643
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| || |||||||||||||||||||  | || ||  ||||||||||||||||||  ||||||||||| |||||||||||||||    
T  14235557 caaatatcatttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtt 14235643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 18951368 - 18951438
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||  |||| |  |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtt 18951438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 18248944 - 18249033
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||||||||||||  |||| ||  |||||| || |||| ||||  |||||||||| || ||||||||||||    
T  18248944 ggtcaaataccacttttggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtt 18249033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 13543637 - 13543569
Alignment:
Q  283 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||| |||||||| |||||||||||| |||||||| |||||| ||||||||| ||||||| ||||||    
T  13543637 aagttaatcctttaaatttcaaaagtttcaaataggttcttttacttgataaactatttcactgttacc 13543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 5734558 - 5734621
Alignment:
Q  290 tcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||| |||||||| ||||| ||| |||||||| |||||| ||||||||||||||||    
T  5734558 tcctttaagttttaaaagtttcaaataagtcattttagttaataaactatttcaccgttacccc 5734621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 13538453 - 13538544
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||| |||||||||||||||||||||||| || || | | |||||||||||||| ||||| ||||||| || ||||||  |||||||    
T  13538453 ttggccaaagaccacttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtt 13538544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 13543068 - 13543159
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||| |||||||||||||||||||||||| || || | | |||||| | ||||||||||| ||||||| || |||||| ||||||||    
T  13543068 ttggccaaagaccacttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtt 13543159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 30737832 - 30737899
Alignment:
Q  286 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| |||||||||||||||||||||||| ||| ||| |||||||||||  ||| |||||||||||    
T  30737832 ttagtcttttaagtttcaaaagttttaaataagtcatttaagttgataaactgttttaccgttacccc 30737899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 32660287 - 32660334
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  32660287 caagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 32660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 36418524 - 36418449
Alignment:
Q  254 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| |||||||||| || || |  ||||||||||||||| ||||||||||||| || |||||||||||||||    
T  36418524 tttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtt 36418449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 352
Target Start/End: Complemental strand, 30738320 - 30738223
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagt--tgataaacaatttcaccgttaccc 352  Q
    |||| ||||| |||| ||||| |  |||||| |||||||| ||||||||||||| ||||| ||| |||||||  |||||||| |||||||||||||||    
T  30738320 ggtcattttaatttgacagaattctcaagtttgtcctttatgtttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttaccc 30738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 38405674 - 38405584
Alignment:
Q  239 tggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||| ||||| ||||||||||||  ||||| | |||||||| || |||||||||| ||||||| || || ||| ||||||||    
T  38405674 tggtcaaataccatttttgatccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtt 38405584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 6336206 - 6336259
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  6336206 ggtcattttagtttgaaagaatttccaagttagtcctttaagtttcaaaagttt 6336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 35189900 - 35189988
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| ||||||| ||| ||||| ||||  |||| |  |||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  35189900 ggtcaaatatcacttttagtcattttaatttgatagaattctcaagttagtc-tttaagtttcgaaagttttaaataggtcattttagtt 35189988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 35190546 - 35190461
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||| ||||||||||||| |||| ||||| || ||||||| | ||||||||||  ||||||| || |||||||||||||||    
T  35190546 aaatatcacgtttggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtt 35190461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 5735120 - 5735029
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||| ||||| ||||||||||||||||   ||| |  |||||||||| ||||| |||| ||| |||||| || ||||||||||||    
T  5735120 ttggtcaaatatcacttatggtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtt 5735029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 19278693 - 19278779
Alignment:
Q  242 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| |||||||| ||||||||||||| ||||| |   ||||||||||||||| |||||||| |||||| ||| | |||||||||    
T  19278693 tcaaatatcacttttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaaa-ttttaattagcttcttttagtt 19278779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 36417874 - 36417957
Alignment:
Q  242 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttt 325  Q
    |||||| ||||||||| ||||||||||||  ||||| |  |||||||||||||||| |||| ||||||| || ||||| |||||    
T  36417874 tcaaatgccacttttgatccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttctttt 36417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 1722567 - 1722641
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 335  Q
    ||||||||||| || || |  ||||||| ||||||||||||||||||||| ||||| ||| |||||||| |||||    
T  1722567 cttttagtttgacataattctcaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagtttataaa 1722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 38405560 - 38405518
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  38405560 aagttttaaatatgtccttttagttgataaactatttcaccgt 38405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 353
Target Start/End: Complemental strand, 19279244 - 19279187
Alignment:
Q  296 aagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||| |||||||||||||||||| |||| | ||||||  ||||||||    
T  19279244 aagtttcaaaagtttcaaataggtccttttagttaataagctatttcagagttacccc 19279187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 32660322 - 32660375
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||| |||||||||| ||||| | | ||||||||||||||||||||||||||||    
T  32660322 ggtcattttagtttgacagaattcctaagttagtcctttaagtttcaaaagttt 32660375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 35189976 - 35190025
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 306  Q
    |||| |||||||||| ||||| | ||||||||||||||||||||||||||    
T  35189976 ggtcattttagtttgacagaactcccaagttagtcctttaagtttcaaaa 35190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 9919230 - 9919278
Alignment:
Q  281 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| |||||||||||||||||||| | ||||| ||||||||||||    
T  9919230 ccaagttggtcctttaagtttcaaaagtctcaaataagtccttttagtt 9919278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 13538575 - 13538623
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||||    
T  13538575 aagtttcaaatatgtcattttagttgataaactatttcaccgttacccc 13538623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 35342365 - 35342325
Alignment:
Q  289 gtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  35342365 gtcctttaagtttcaaaagtttcaaataagtccttttagtt 35342325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 19278771 - 19278862
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||| ||||| |  |||||||   ||||||||||||| | ||| |||||  || ||||||||||||||| ||||||| |||||||    
T  19278771 cttttagtttgacagaattctcaagttacctctttaagtttcaataatttcaaataaatcattttagttgataaactatttcactgttaccc 19278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 329
Target Start/End: Original strand, 32660195 - 32660274
Alignment:
Q  250 cacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||| |||||||||  || || ||| |||||| ||||||||||||| ||||||| || || || |||||||||    
T  32660195 cacttttggtctttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagtt 32660274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 9828182 - 9828216
Alignment:
Q  161 aattgctcttctcccatttggttttgctcattccc 195  Q
    ||||||||||||||||| |||||||||||||||||    
T  9828182 aattgctcttctcccatctggttttgctcattccc 9828216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 13543737 - 13543651
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||  || |||||||||| ||||| |  ||| |||||  ||||| ||||||||||||| || || |||||||||||    
T  13543737 caaataccacttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtt 13543651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 36417988 - 36418034
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  36417988 aagtttcaaataggtccttttagttgataaattatttcactgttacc 36418034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 9919798 - 9919750
Alignment:
Q  281 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| ||||||||||||||||||||   ||||| ||||||||||||    
T  9919798 ccaagttggtcctttaagtttcaaaagtcccaaataagtccttttagtt 9919750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 35446954 - 35446986
Alignment:
Q  161 aattgctcttctcccatttggttttgctcattc 193  Q
    |||||||||||||||||||| ||||||||||||    
T  35446954 aattgctcttctcccatttgtttttgctcattc 35446986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 38082661 - 38082697
Alignment:
Q  308 ttttaaataggtccttttagttgataaacaatttcac 344  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  38082661 ttttaaataggtcattttagttgataaactatttcac 38082697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 30576730 - 30576634
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  30576730 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacccc 30576634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 34686985 - 34686875
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    ||||||||| ||||| ||||||||||| |||| ||||| |  |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||    
T  34686985 ggtcaaatatcacttatggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactat 34686886  T
Q  340 ttcaccgttac 350  Q
    |||||||||||    
T  34686885 ttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 5358632 - 5358741
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    ||||||| |||||  ||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||     
T  5358632 aaatacctcttttaatccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagttgataaactatttcg 5358731  T
Q  344 ccgttacccc 353  Q
    | ||||||||    
T  5358732 ctgttacccc 5358741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 9277052 - 9276960
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||    
T  9277052 tccttttagtttgatagaatttccaagttagtcctttaagtttcaaaagtttcaaataggt-cttttagttgataaactatttcaccgttaccc 9276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 243 - 351
Target Start/End: Complemental strand, 13771951 - 13771843
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||||||| |||||||| |||||||||| || || | |||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||| |||||    
T  13771951 caaataccatttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttatttgataaaccatttc 13771852  T
Q  343 accgttacc 351  Q
    || ||||||    
T  13771851 actgttacc 13771843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 9770851 - 9770768
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 345  Q
    |||||||||| ||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  9770851 ttttagtttgacagaattcccaagttagtcctttaattttcaaaagtttcaaataggtccttttagttgataaactatttcacc 9770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 29794328 - 29794238
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    ||||||||||||||| || || ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||  ||||||||||    
T  29794328 ggtccttttagtttgacataatttccaagttagtcttttaagtttcaaaagtttcaaatagatccttttagttgataaattatttcaccgt 29794238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 243 - 352
Target Start/End: Original strand, 35433885 - 35433994
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    |||||||| ||||||||||||||| ||||  |||| |  |||||||||| ||||||||||||||||||||||||| || ||||||||||||||  |||||    
T  35433885 caaatacctcttttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttc 35433984  T
Q  343 accgttaccc 352  Q
    || |||||||    
T  35433985 actgttaccc 35433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 39700948 - 39701043
Alignment:
Q  258 gtccttttagtttgtcagaaattcc-aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||| || ||||||| |||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||||    
T  39700948 gtccttttagtttgaca-aaattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgttacccc 39701043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 25737092 - 25737178
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||  |||||||||||||||||| || || || ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  25737092 caaataccatatttggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtt 25737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 30576215 - 30576301
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 344  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||| |||||||| |||| |||| ||||||||||||||| |||||||    
T  30576215 gtccttttagtttgccagaatttccaagttagtcttttaagtttgaaaagtttcaaattggtctttttagttgataaactatttcac 30576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 345
Target Start/End: Original strand, 13771403 - 13771508
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    ||||||||||| |||||  || |||||||||| ||||| || |||||||||| ||||||||| |||||||| |||||| | |||||||||||||||| ||    
T  13771403 ggtcaaatacctcttttaatctttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactat 13771502  T
Q  340 ttcacc 345  Q
    ||||||    
T  13771503 ttcacc 13771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 23553417 - 23553513
Alignment:
Q  257 ggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||| || |||||| |||||| ||| ||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  23553417 ggtccttttagtttgaca-aaattctcaagttggtcttttaaatttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttacccc 23553513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 36359890 - 36359975
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| || |||||  ||||||||    
T  36359890 aaataccactcttggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtt 36359975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 347
Target Start/End: Original strand, 36359968 - 36360053
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||||||| ||||| | ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| |||| |||||    
T  36359968 ttttagtttgacagaattcccaagttagtcctttaagttttaaaagtttcaaataggtcattttagttgataaactattttaccgt 36360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 349
Target Start/End: Original strand, 44040809 - 44040916
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    ||||||||| || ||||||||||||||||||  ||||| || ||| |||| | |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  44040809 ggtcaaatatca-ttttggtccttttagtttaacagaatttacaaattag-cttttaagtttcaaaagttttaaataggtcattttagttgataaactat 44040906  T
Q  340 ttcaccgtta 349  Q
    ||||| ||||    
T  44040907 ttcactgtta 44040916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 45018062 - 45017977
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||| |||||||||||||| || ||  | ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  45018062 aaataccacttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtt 45017977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 344
Target Start/End: Complemental strand, 35434417 - 35434313
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaat 339  Q
    |||||||| | | ||||||||||||||||||| || || | | |||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||| ||    
T  35434417 ggtcaaatgctatttttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactat 35434318  T
Q  340 ttcac 344  Q
    |||||    
T  35434317 ttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 39701537 - 39701451
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| |||||||||||||||||| ||||| |  ||||||||| ||||||||||||||||||| || || ||||||||||||    
T  39701537 caaataccacgtttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtt 39701451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 4613803 - 4613891
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccg 346  Q
    |||||||||||||| || || || | ||||||||||||||||||||||||||| |||||| | ||||||||| |||||| |||||||||    
T  4613803 gtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagtttataaactatttcaccg 4613891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 16197092 - 16197184
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    |||||||||||||| ||||| | |||||||| || |||||||||||||||| | |||||||||||||||||| |||||  |||||||| ||||    
T  16197092 gtccttttagtttgacagaattcccaagttaatcatttaagtttcaaaagtatcaaataggtccttttagttaataaattatttcaccattac 16197184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 25730193 - 25730097
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||| ||||| |||| ||||| |  |||||||||||||||| |||||||||||| ||||| ||| ||||||||||||||| ||||||| ||||||||    
T  25730193 ggtcattttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttacccc 25730097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 9770930 - 9770844
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||| || || ||| ||||||||    
T  9770930 caaataccacttttggtccttttagtttgaca-aaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtt 9770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 36314796 - 36314705
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||||||||||||||| || || |  |||||||||| ||||| |||| ||||||| || || ||||||||||||    
T  36314796 ttggtcaaataccacttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtt 36314705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 326
Target Start/End: Complemental strand, 36360219 - 36360136
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||||||| |||||||| |||||||||| ||||| ||||||||||||| |||||||||| ||||||| ||||| ||| |||||    
T  36360219 caaataccaattttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtcttttta 36360136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 39701462 - 39701367
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||  |||| | |||  |||||| |||||||||||||| ||| ||||||||||||||||||||||||| | ||||| ||||||||    
T  39701462 gtccttttagtttgatagaattcccagattagtcatttaagtttcaaaactttcaaataggtccttttagttgataaactacttcactgttacccc 39701367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 45017730 - 45017821
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| ||||||| |||||||||||||||||||||  |||| | |||||||||||||||||||||| ||||||| || || ||| ||||||||    
T  45017730 ttggccaaatactacttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtt 45017821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 8713835 - 8713901
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||||||||||||||||||||||||||| || || |  |||||||||||||||||||||||||||||    
T  8713835 aaataccacttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagttt 8713901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 8714420 - 8714330
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||||||||  |||| |  |||||||||  |||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  8714420 cttttagtttgatagaattcgcaagttagttttttaagtttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 8714330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 351
Target Start/End: Original strand, 9276553 - 9276639
Alignment:
Q  265 tagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    ||||||| ||||| |  ||||||||||  |||||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  9276553 tagtttgacagaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcactgttacc 9276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 29794402 - 29794316
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| || |||||||| |||||||||| ||||| | ||||||||||||||||| |||| |||||||| | |||||||||||||||    
T  29794402 caaatatcatttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtt 29794316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 44041357 - 44041263
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||||||| ||||| | | ||||||||| || ||||||||||| ||| ||||| ||| ||||||||||||||| |||||||| ||||||    
T  44041357 gtccttttagtttgacagaattcctaagttagtctttaaagtttcaaaaatttcaaataagtcattttagttgataaactatttcaccattaccc 44041263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 16208735 - 16208674
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  16208735 caagttagtcctttgagtttcaaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 30576803 - 30576718
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| || |||| ||||||||||||| ||||| || |||||||||| | |||||||||||||||| || |||||||||||||||    
T  30576803 aaatactacgtttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtt 30576718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 25737679 - 25737583
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||| ||||| |||| ||||| |  |||||||||||||||| |||||||||||| |||||  || ||||||||||||||| ||||||| ||||||||    
T  25737679 ggtctttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaatatttcattttagttgataaactatttcactgttacccc 25737583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 8714487 - 8714412
Alignment:
Q  254 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||||||||||||  |||| |||||||||||||||||||| ||||||||||| |||||| | |||||||||    
T  8714487 tttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtt 8714412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 16197012 - 16197103
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| ||||||| ||||||||||||||| ||||| ||||| |  ||||||||||| ||||||||| ||||||| || || ||||||||||||    
T  16197012 ttggccaaatactacttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtt 16197103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 31169550 - 31169460
Alignment:
Q  262 ttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||| | ||||||| ||| |||||||||||||||| |||||||| ||||| ||| ||||||||||||||  |||||||||||||||    
T  31169550 ttttagtttgac-gaaattctcaaattagtcctttaagttttaaaagtttcaaatatgtcattttagttgataaaatatttcaccgttaccc 31169460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 23179036 - 23179096
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaa 304  Q
    ||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  23179036 caaatacca-ttttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 29030265 - 29030176
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||| |||||||||| || || | |  ||||| ||||||||||||| ||||||| || || ||||||||||||    
T  29030265 ggtcaaataccacttttggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagtt 29030176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 8713912 - 8714003
Alignment:
Q  261 cttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||| || |||||| |||||||||| |||||||||||||| ||| |||||| || ||||||||||||||   ||||||||||||||    
T  8713912 cttttagtttgaca-aaattcacaagttagtcttttaagtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttaccc 8714003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 11113613 - 11113661
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  11113613 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 40553369 - 40553297
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||| || || ||| ||||||||| |||||||||||||||||| || | |||||||||||||    
T  40553369 ggtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtt 40553297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 43422944 - 43422992
Alignment:
Q  281 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  43422944 ccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtt 43422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 14871493 - 14871406
Alignment:
Q  243 caaataccactttt-ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||| |||||||| |||||| ||||| | | ||||||||| |||||||||| ||||||| || ||||| |||||||||    
T  14871493 caaataccactttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagtt 14871406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 25737168 - 25737259
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    ||||||||||||| | ||| | | ||||||||||||||| |||||||||||| | ||| ||| ||||| ||||||||| |||||| ||||||    
T  25737168 tccttttagtttgaccgaattcctaagttagtcctttaaatttcaaaagtttcacatatgtcattttacttgataaactatttcatcgttac 25737259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 6236376 - 6236290
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||||||| |||||| ||||||||||||||  || || | |||||||| | ||||||||||||| ||||| || ||||||||||||    
T  6236376 ggtcaaatatcactttcggtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtcctttta 6236290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 29792662 - 29792576
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| |||| |||||||||||||| ||||| | |||| |||||||||||| |||| |||||||  | ||| |||||||||||    
T  29792662 caaataccatttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtt 29792576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 30576140 - 30576226
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| ||||||||||| |||||| ||| ||||| | ||||||||||||||||| |||  ||||||| || || ||||||||||||    
T  30576140 caaatatcacttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtt 30576226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 23553340 - 23553429
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||  |||| ||||||||||||| ||||| |  ||| ||  ||||||||||||| ||||||| || |||||||||||||||    
T  23553340 ggtcaaataccatgtttgatccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtt 23553429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 347
Target Start/End: Original strand, 45017814 - 45017899
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||||||  ||||| | |||| ||||||||||||| ||||||| ||| ||||| ||| ||||| ||||||||| ||||||||||    
T  45017814 ttttagtttaacagaattcccaaattagtcctttaagattcaaaaatttcaaataagtcattttaattgataaactatttcaccgt 45017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 44041422 - 44041346
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||||||||||||| || || || ||||||||||||||||||||  ||||||| || || ||||||||||||    
T  44041422 tttttgtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtt 44041346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 9277109 - 9277042
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| ||||| | ||||||||||| |||||||||| ||||||| || ||| |||||||||||    
T  9277109 ttttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtt 9277042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 329
Target Start/End: Original strand, 9770552 - 9770635
Alignment:
Q  246 ataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||| ||||| ||| ||| ||||| | |||||||| || |||||||||| ||||||| || || ||||||||||||    
T  9770552 ataccacttttgctccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtt 9770635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 11113534 - 11113625
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| ||||||||||||| | ||||||||||||| || || | | ||||||||||||||| |||  ||||||| ||  ||||||||||||||    
T  11113534 ttggccaaataccactttagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtt 11113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 25730271 - 25730196
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 315  Q
    ||||||||| |||  ||| |||||||||||||  |||| |||||||||||||||||||||||  ||||||| ||||    
T  25730271 ggtcaaataacacaattgatccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaat 25730196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 4613729 - 4613814
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||| ||||||||||||||||||  |||| || ||||||| |||||||| |||  ||||||| || || ||||||||||||    
T  4613729 aaatatcacatttggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtt 4613814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 9770674 - 9770723
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 306  Q
    ||||||||||||||| ||||| | | ||||||||||||||||||||||||    
T  9770674 ggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaa 9770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 31169630 - 31169543
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| ||| ||||||| |||||||||| || |||||| ||||||||||||||||||||  ||||||| |||||| || ||||||||    
T  31169630 gtcaaatatcacgtttggtcattttagtttgaca-aaattctcaagttagtcctttaagttt-taaagtttcaaatagatcattttagtt 31169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 39700887 - 39700959
Alignment:
Q  257 ggtccttttagtttgtcagaaattcc-aagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||| || ||||||  ||||||||||||||||||| |||||||| || || ||||||||||||    
T  39700887 ggtccttttagtttgaca-aaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtt 39700959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 6235818 - 6235886
Alignment:
Q  283 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||| |||||||| |||||||||||| ||||||    ||||||||||||||| |||||||| |||||    
T  6235818 aagttaatcctttaaatttcaaaagtttcaaatagactattttagttgataaactatttcacctttacc 6235886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 40553433 - 40553357
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||| || || | | || |||||||||| ||||| |||||||| ||  ||||||||||||||    
T  40553433 ttttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtt 40553357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 14871378 - 14871331
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||| ||||||||||||||||||||||||| |||| | ||||||||    
T  14871378 aagtttcaaataggtccttttagttgataaactatttaatcgttaccc 14871331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 25737757 - 25737682
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaat 315  Q
    ||||||||| |||  ||| | |||||||||||  |||| |||||||||||||||||||||||  ||||||| ||||    
T  25737757 ggtcaaataacacaattgattcttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaat 25737682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 344
Target Start/End: Original strand, 34686509 - 34686560
Alignment:
Q  293 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 344  Q
    ||||||||| ||||||||||||||| || |||||||||||| || |||||||    
T  34686509 tttaagttttaaaagttttaaatagatctttttagttgatagactatttcac 34686560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 43423130 - 43423091
Alignment:
Q  290 tcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  43423130 tcctttaagtttcaaaagtttcaaataggtcattttagtt 43423091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 43422847 - 43422929
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    |||||||||||||| | |||||||||||  | || |  ||| ||||||||||||||||  ||||||| || ||||||||||||    
T  43422847 aaataccacttttgattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtcctttta 43422929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 43423239 - 43423169
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||||||| | ||||||||||||||||||||| || || | | ||||||||  |||||||||| |||||||    
T  43423239 ggtcaaatgctacttttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagttt 43423169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 45017989 - 45017942
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaa 306  Q
    ||||||||||||||| ||  | ||||||||||||||||||||||||||||    
T  45017989 ggtccttttagtttgaca--agttccaagttagtcctttaagtttcaaaa 45017942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 310
Target Start/End: Complemental strand, 36360121 - 36360092
Alignment:
Q  281 ccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||||||||||||||||||||||||||||    
T  36360121 ccaagttagtcctttaagtttcaaaagttt 36360092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 43422980 - 43423028
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||| |||||||||| || || ||||||||||||||||||| |||||||    
T  43422980 ggtcattttagtttgacaaaatttccaagttagtcctttaaatttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 7e-31; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 46191071 - 46190927
Alignment:
Q  10 tcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggct 109  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||| |||||||||||| |||| |||||||||||||    
T  46191071 tcaatgcatgcaaccatccactttgccaccatgcattacat-gagaagtgcaacttgtctttcatgcaccatggacatgtgtcttgctacaaaagtggct 46190973  T
Q  110 ttaccaaacataatattgagtttggatcatcatttaggccaattccat 157  Q
    ||||||| |  ||||||| | ||| |||||||||| || |||||||||    
T  46190972 ttaccaatc--aatattgggcttgaatcatcatttgggtcaattccat 46190927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 352
Target Start/End: Complemental strand, 48352797 - 48352708
Alignment:
Q  263 tttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||| || || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  48352797 tttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 48352708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 8902829 - 8902920
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||| || || | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||    
T  8902829 ttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagttgataaattatttcactgttacccc 8902920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 346
Target Start/End: Original strand, 2965479 - 2965583
Alignment:
Q  242 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaattt 341  Q
    |||||||||| |||| ||| |||||||||| | ||| || |||||||  |||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  2965479 tcaaataccaatttttgtctttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagttgataaactattt 2965578  T
Q  342 caccg 346  Q
    |||||    
T  2965579 caccg 2965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 1765763 - 1765846
Alignment:
Q  264 ttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||||| || || ||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  1765763 ttagtttgacataatttctaaattagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgt 1765846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 27351115 - 27351210
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||| || || |  ||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||| ||||||||||||||||    
T  27351115 gtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtatcaaataagtcattttagttgataaactatttcaccgttacccc 27351210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 11897828 - 11897917
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||| |||||||||| ||||| |  |||||||||| |||||||||| ||||||| || |||||||||||||||    
T  11897828 ggtcaaataccacttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtt 11897917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 29419187 - 29419098
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| |||||||||||||||||||||| || || ||||||||||||| || ||||||| ||||||| || |||||||||||||||    
T  29419187 ggtcaaatatcacttttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtt 29419098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 350
Target Start/End: Original strand, 39302320 - 39302427
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||||||||||||| | ||||||||||| ||||| |  ||| ||| | |||||||||||||||||||  | ||||| |||||||||||||||| |||||    
T  39302320 caaataccacttttgtttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttc 39302419  T
Q  343 accgttac 350  Q
    ||||||||    
T  39302420 accgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 10686750 - 10686680
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  10686750 caagttagtcatttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 10686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 326
Target Start/End: Complemental strand, 10686848 - 10686766
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||| |  ||||||||||||    
T  10686848 aaatatcacttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtcctttta 10686766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4129963 - 4129859
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||| | |||||||||||||| ||||||||||||||| ||||||||| |||||| ||||| || |||| | |||| |||||||||||| |||| ||||    
T  4129963 tgcaacatgtcaatgcatgcaaccatccactttgccaccatgcattaca-tgagaagtgcaacttttctttcatgcaccatggacatgtgtcttgctaca 4129865  T
Q  101 aaagtg 106  Q
    ||||||    
T  4129864 aaagtg 4129859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 353
Target Start/End: Original strand, 34254564 - 34254658
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||| ||||| | | |||| ||||||||||||||||||||||| |||||  | |||||||| ||||||| ||||||| ||||||||    
T  34254564 tccttttagtttgacagaattcctaagtcagtcctttaagtttcaaaagtttcaaatatatgcttttagtcgataaactatttcactgttacccc 34254658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 44963903 - 44963992
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    ||||||||||||||  || | | |||| |||||||||||||||||||||||||||||||  || ||| ||||||||||| ||||||||||    
T  44963903 gtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaatatatcttttcagttgataaactatttcaccgt 44963992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 34254499 - 34254574
Alignment:
Q  254 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| ||||||||||||| ||||| |  |||||| |||||||||| |||||||||||||||||| |||||||||||    
T  34254499 tttgttccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtt 34254574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 353
Target Start/End: Complemental strand, 8903354 - 8903244
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||||| |||||||||| |||||||||| || || |  ||||||| ||||||||||||| ||||||| |||||  || ||||||||| ||||  |||||    
T  8903354 caaatactacttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttc 8903255  T
Q  343 accgttacccc 353  Q
    || ||||||||    
T  8903254 actgttacccc 8903244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 48352877 - 48352791
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||||||||| ||||| | || |||||||| |||||||||| |||| || || ||||||  |||||||    
T  48352877 caaataccacttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtt 48352791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 17898986 - 17898897
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||||||||||||| ||  | |  ||| ||||| |||||||||| |||| ||| || |||||||||||||||    
T  17898986 ggtcaaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtt 17898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 27351041 - 27351126
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| ||||||| ||||| |||| ||||| |  ||||||||||||||||||||| ||||||| || || ||||||||||||    
T  27351041 aaataccacgtttggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtt 27351126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 4772698 - 4772650
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  4772698 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 10685848 - 10685923
Alignment:
Q  254 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||| || |||| || || ||| ||||||||    
T  10685848 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtt 10685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 39302823 - 39302756
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||||||||| |||||||||||||||||| ||||| |  |||||||||||||||| ||| ||||||||    
T  39302823 caaataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagttt 39302756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 44964130 - 44964063
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| ||||| |  ||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtt 44964063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 17898909 - 17898837
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||  |||| |  ||| ||||||||||||||||||||||||| ||||| ||| ||||||||    
T  17898909 ggtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtt 17898837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 1765984 - 1765917
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| |||||||  || |||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtt 1765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 10685916 - 10685998
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||| ||||| |||||||||||||||||||||||||||         || ||| ||||||||||||||| |||| |||||||||||    
T  10685916 ttttagtttgacagaatttccaagttagtcctttaagtttcaaa---------tatgtcattttagttgataaactattttaccgttacccc 10685998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 29419110 - 29419014
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt----taaataggtccttttagttgataaacaatttcaccgtta 349  Q
    ||||||||||||||| ||||| | | || |||||| ||||||||||||||||||    |||||| ||| ||||||||||||||  | ||||||||||    
T  29419110 ggtccttttagtttgacagaattccaaaattagtcttttaagtttcaaaagtttcaaataaataagtcattttagttgataaattacttcaccgtta 29419014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 48352309 - 48352359
Alignment:
Q  303 aaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||| |||||||| |||||||||||||||| ||||||||| ||||||    
T  48352309 aaaagtttcaaataggttcttttagttgataaactatttcaccgctacccc 48352359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 323
Target Start/End: Complemental strand, 5522123 - 5522043
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctt 323  Q
    |||||||  ||||||||||||| |||||| || || | ||| |||||||||||||||||   |||||| ||||||||||||    
T  5522123 caaatacatcttttggtcctttaagtttgacaaaactaccaggttagtcctttaagttttttaagtttcaaataggtcctt 5522043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 49651023 - 49650975
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| |||||||||| |||||||||||||| ||||||| ||||||||    
T  49651023 aagtttcaaataggtccctttagttgataaactatttcactgttacccc 49650975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 1765924 - 1765881
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||    
T  1765924 ttttagtttgacagaatttccaagttactcctttaagtttcaaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 28055744 - 28055803
Alignment:
Q  242 tcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagttt 301  Q
    ||||||||| |||||||| |||| |||||| || |||| ||| |||||||||||||||||    
T  28055744 tcaaatacctcttttggttctttaagtttgacaaaaataccaggttagtcctttaagttt 28055803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 4772161 - 4772222
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaa 305  Q
    ||||||||| || ||||||||||||||| || |||||| |||| |||||||||||||||||||    
T  4772161 aaataccacgttaggtccttttagtttgaca-aaattcacaaggtagtcctttaagtttcaaa 4772222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 27351673 - 27351587
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    |||||||||| |||||||||||||||| |||| || || |  ||||||  | ||||||||||| |||||||||| || ||| |||||    
T  27351673 ggtcaaatacaacttttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgtttta 27351587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 49650558 - 49650648
Alignment:
Q  239 tggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||||||| ||||  ||||||||||||| || || |  |||||||||||||||| |||  ||| ||| || |||||||||||||||    
T  49650558 tggtccaataccattttttatccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtt 49650648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 49651096 - 49651050
Alignment:
Q  283 aagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||| ||||||| |||||||||||||| || ||||||||    
T  49651096 aagttagtccttcaagtttcgaaagttttaaatagatcattttagtt 49651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 23767660 - 23767619
Alignment:
Q  288 agtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||| | ||||| ||||||||||||    
T  23767660 agtcctttaagtttcaaaagtctcaaataagtccttttagtt 23767619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 44964075 - 44964022
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    ||||||||||||||| ||||| |  |||||||||||||||| ||| ||||||||    
T  44964075 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagttt 44964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 622841 - 622873
Alignment:
Q  163 ttgctcttctcccatttggttttgctcattccc 195  Q
    |||||||||||||||||| ||||||||||||||    
T  622841 ttgctcttctcccatttgtttttgctcattccc 622873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 2965958 - 2965897
Alignment:
Q  286 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    |||||| |||||||||||||||||    |||| ||||||||||| ||| || ||||||||||||||    
T  2965958 ttagtcatttaagtttcaaaagtt----atagatccttttagtttatagactatttcaccgttacc 2965897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 34255053 - 34254998
Alignment:
Q  263 tttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggt 319  Q
    ||||||||| ||||| |||||||||||   |||||||||||||||||| ||||||||    
T  34255053 tttagtttgacagaatttccaagttagat-tttaagtttcaaaagtttcaaataggt 34254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 35938326 - 35938358
Alignment:
Q  161 aattgctcttctcccatttggttttgctcattc 193  Q
    |||||||||||||||||||| ||||||||||||    
T  35938326 aattgctcttctcccatttgtttttgctcattc 35938358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 49650676 - 49650724
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| |||||||| |||||||||||||||| |||||||  |||||||    
T  49650676 aagtttcaaataggttcttttagttgataaaccatttcactattacccc 49650724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 49974019 - 49973979
Alignment:
Q  289 gtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||| ||| | ||||||||||||    
T  49974019 gtcctttaagtttcaaaagtttcaaacaagtccttttagtt 49973979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 97)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 2323760 - 2323915
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||| | |||||| ||||||| ||||||||||||||| |||||||| |  |||||||||| ||||||||| |||| ||||||||| || |||| ||||    
T  2323760 tgcaacatgtcaatgtatgcaaccatccactttgccaccatgcattacgtc-agaaatgcaacttgtcttacatgcaccatggacatttgtcttgctaca 2323858  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggccaattccat 157  Q
    ||||||||||||| || || |||| || | ||||||||||| || ||||||||||||    
T  2323859 aaagtggctttactaatcacaatagtgggcttggatcatcacttgggccaattccat 2323915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 19925397 - 19925311
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 345  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  19925397 tccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcctttcagttgataaactatttcacc 19925311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 28256558 - 28256656
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccctgt 357  Q
    ||||||||||||| ||||| |  |||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||    
T  28256558 tccttttagtttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggttcttttagttgataaactatttcactgttaccccctgt 28256656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 257 - 351
Target Start/End: Complemental strand, 31176018 - 31175924
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||| || |||||||    
T  31176018 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagttgataatctattccaacgttacc 31175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 10619867 - 10619955
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    ||||||||||| || || |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtta 10619955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 35214870 - 35214966
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||||| ||||| |  |||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  35214870 ggtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttacccc 35214966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 353
Target Start/End: Original strand, 5559173 - 5559268
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtccttt-aagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||  | || | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  5559173 tccttttagtttgataaaattcccaagttagtccttttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 5559268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 27995615 - 27995548
Alignment:
Q  283 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  27995615 aagttagtcctttaagtttcaaaagttttaaatagatccttttagttgataaactatttcaccgttac 27995548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16184099 - 16184247
Alignment:
Q  1 tgcaacttatcaatgcatgcaactatccactttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttaca 100  Q
    |||||| | |||||||||||||| || |||||||||||| ||||||||||  |||| ||||| ||||||| | |||| |||| ||||||| |||| | ||    
T  16184099 tgcaacatgtcaatgcatgcaaccattcactttgccaccatgcattacata-agaagtgcaacttgtctttcatgcaccatgtacatgtgtcttgctgca 16184197  T
Q  101 aaagtggctttaccaaacataatattgagtttggatcatcatttaggcca 150  Q
    ||||||| |||||||| || ||||||| | |||||||||||||| |||||    
T  16184198 aaagtggttttaccaatcacaatattgggcttggatcatcatttgggcca 16184247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 31893614 - 31893525
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| || ||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||| || |||||||||||||||    
T  31893614 ggtcaaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtt 31893525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 1349208 - 1349114
Alignment:
Q  262 ttttagtttgtcagaaattccaagtta---gtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||| ||||| |||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  1349208 ttttagtttgacagaatttccaacttataagtcctttaagtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttacccc 1349114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 8140457 - 8140568
Alignment:
Q  32 ttgccaccttgcattacattgagaaatgcaatttgtcttacctgcatcatggacatgtgccttgttacaaaagtggctttaccaaacataatattgagtt 131  Q
    ||||||||||||||||||| ||| ||||||| ||||||| | |||| |||||||||||| |||| |||||||||||||||||||| || ||||||| | |    
T  8140457 ttgccaccttgcattacat-gagtaatgcaacttgtcttgcatgcaccatggacatgtgtcttgctacaaaagtggctttaccaatcacaatattgggat 8140555  T
Q  132 tggatcatcattt 144  Q
    ||||| |||||||    
T  8140556 tggattatcattt 8140568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 39959251 - 39959163
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgtta 349  Q
    ||||||||||| ||||| |||||||||| || |||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||||    
T  39959251 cttttagtttgacagaatttccaagttaatcatttaagtttcaaaagtttcaaataggttcttttacttgataaactatttcaccgtta 39959163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 4187749 - 4187663
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 345  Q
    |||||||| |||| ||||| || |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  4187749 tccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcacc 4187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 33235616 - 33235518
Alignment:
Q  254 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||||||||||| || || |  |||||||||||||||||||||||||  || ||||||||| ||||||||||||||| ||||||| |||||||    
T  33235616 tttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgataaactatttcactgttaccc 33235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 33879654 - 33879568
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    |||||||||||| ||||||||||||||||||| ||||| |  ||||||||||||||||||||| ||||||| || ||||||||||||    
T  33879654 ggtcaaataccatttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtcctttta 33879568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 5805028 - 5805113
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||| ||||||||||||||| ||||| |  ||||||||||||||||||||| ||||||| || |||||||||||||||    
T  5805028 aaataccactttcggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 5805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 5805101 - 5805186
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||||||||||||| ||||| |  |||| || |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  5805101 ggtccttttagtttgacagaattctcaagctattcctttaagtttcaaaagttttaactaggtccttttagttgataaactatttc 5805186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 33235097 - 33235193
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||| ||||| ||||| | ||||||||| ||||||| |||||||||||| ||| ||||| ||||||||||||||| |||||| |||||||||    
T  33235097 ggtccttttggtttgacagaattcccaagttagacctttaaatttcaaaagtttcaaagaggtcattttagttgataaactatttcatcgttacccc 33235193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 33879577 - 33879505
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  33879577 ggtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagtt 33879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 1441573 - 1441482
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||| |||||||||||||||||||||| || || | |||||||||||||||| ||||| ||||||| || |||||| ||||||||    
T  1441573 ttggtcaaatatcacttttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtt 1441482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 5559096 - 5559183
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcc-tttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| ||||||||||||| |||| ||||| | |||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  5559096 caaataccacgtttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtt 5559183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 5559752 - 5559667
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||||||||| || || | |||||||||||||||||||||  ||||||| || |||||||||||||||    
T  5559752 caaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagttt-taaagtttcaattaggtccttttagtt 5559667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 8039747 - 8039805
Alignment:
Q  295 taagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  8039747 taagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttacccc 8039805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 20366673 - 20366587
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| ||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||  || || |||||||||||    
T  20366673 caaataccacatttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtt 20366587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 21412931 - 21413001
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| || ||||||||    
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtt 21413001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 351
Target Start/End: Original strand, 28104296 - 28104394
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacc 351  Q
    ||||||||||||||||||| || || |  |||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||  ||||||| ||||||    
T  28104296 ttttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagttgataaattatttcactgttacc 28104394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 8039649 - 8039738
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||| |||||||||||||| || || |  ||||||||| ||||||||||| ||||||| || |||||||||||||||    
T  8039649 ggtcaaataccactttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtt 8039738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 352
Target Start/End: Complemental strand, 23679587 - 23679497
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||||||||| ||||| |  |||||||||| |||||||||||||||||| |||||| |  ||||||||||||||| |||||||||||||||    
T  23679587 cttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagttgataaactatttcaccgttaccc 23679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 19925472 - 19925387
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||| ||||||||||| || || | |||| ||||||||||||||| | |||||||||| ||| |||||||||||    
T  19925472 aaataccacttttggttcttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtt 19925387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 20101909 - 20101974
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    |||||||||||||||||||| ||||||||||||||| | || ||||||||||||| ||||||||||    
T  20101909 caagttagtcctttaagttttaaaagttttaaatagattctcttagttgataaactatttcaccgt 20101974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 20366597 - 20366521
Alignment:
Q  259 tccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 335  Q
    ||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  20366597 tccttttagtttgaca-aaattcgcaagttagtcctttaggtttcaaaagtttcaaatatgtccttttagttgataaa 20366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 34951316 - 34951377
Alignment:
Q  283 aagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcac 344  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||    
T  34951316 aagttagtcctttaagtttcaaaagtttcaaataagtcattttagttgataaactatttcac 34951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 36566587 - 36566526
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||    
T  36566587 aaataccacttttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 20183856 - 20183928
Alignment:
Q  281 ccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||  ||||||| ||||||||    
T  20183856 ccaagttagtcctttaagtttcaaaaatttcaaataagtcattttagttgataaattatttcactgttacccc 20183928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 1286836 - 1286770
Alignment:
Q  286 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  1286836 ttagtcctttaagttttaaaagttttaaatatgt-cttttagttgataaattatttcaccgttacccc 1286770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 21413167 - 21413081
Alignment:
Q  260 ccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgt 347  Q
    ||||||| |||| ||||| ||| ||||||||  |||||||||||||||||| |||||||||||||||||| |||||| | ||||||||    
T  21413167 ccttttaatttgacagaatttctaagttagtt-tttaagtttcaaaagtttcaaataggtccttttagttcataaactacttcaccgt 21413081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 335
Target Start/End: Original strand, 1286433 - 1286511
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaa 335  Q
    |||||||||||||||  |||| |   ||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  1286433 ggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaagtttcaaataggttcttttagttgataaa 1286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 1346545 - 1346624
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttc 342  Q
    ||||||||||||| || || |||||||||||||||||||||||||||||||| ||    || |||||||||||||||| |||||    
T  1346545 tccttttagtttgacataatttccaagttagtcctttaagtttcaaaagtttcaa----gttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 19925094 - 19925180
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| | |||||||| |||||||||| ||||| |||||||||| ||||| ||||||| ||||||| || ||| |||||||||||    
T  19925094 caaatactatttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtt 19925180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 34951597 - 34951511
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| | |||||||| |||||||||| ||||| |  ||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  34951597 caaatactatttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtt 34951511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 5805654 - 5805581
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttga 331  Q
    |||||||||||||| | ||| || ||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  5805654 gtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagttga 5805581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 6220411 - 6220351
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttca 343  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  6220411 caagttagtc-tttaagtttcaaaagttttcaataggttcttttagttgataaactatttca 6220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 16698347 - 16698400
Alignment:
Q  160 aaattgctcttctcccatttggttttgctcattccccttttacttttgtgccta 213  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  16698347 aaattgctcttctcccatttgtttttgctcattcccctcttccttttgtgccta 16698400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 17672583 - 17672636
Alignment:
Q  160 aaattgctcttctcccatttggttttgctcattccccttttacttttgtgccta 213  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  17672583 aaattgctcttctcccatttgtttttgctcattcccctcttccttttgtgccta 17672636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 21433131 - 21433219
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| |||||||| ||||||||||||| || |||||| ||||||||||||||||||||| || |||| || || ||||||||||||    
T  21433131 gtcaaatatcacttttgatccttttagtttgaca-aaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtt 21433219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 29591194 - 29591106
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||| || | ||||||||  | || |  |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  29591194 ggtcaaataccacttttg-tcttattagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtt 29591106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 35214805 - 35214882
Alignment:
Q  253 ttttggtccttttagtttgtcagaaattccaagttagtccttt-aagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||||||||||||| ||||| ||| |||||||| |||| ||||||||||||||| || |||||||||||||||    
T  35214805 ttttgatccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtt 35214882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 40904678 - 40904766
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||| ||||||||| ||||| || || |  |||||||||| ||||||||| |||||||| || |||||||||||||||    
T  40904678 ggtcaaataccacttt-ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtt 40904766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 41020261 - 41020173
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||| ||||| ||||||||||||| || || ||||||||||||  |||||||||  |||||||||| ||| |||||||||||    
T  41020261 ggtcaaataccatttttgatccttttagtttgacataatttccaagttagt-ttttaagttttgaaagttttaattagatccttttagtt 41020173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 20366112 - 20366207
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccccc 354  Q
    |||||||||||||| ||||| |||  ||| | ||| |||  |||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  20366112 gtccttttagtttgacagaa-ttctcagtcaatcccttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttaccccc 20366207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 28256480 - 28256568
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| ||  |||| ||||||||||||| ||||| | |||||||| | |||||| |||||||||||||||| || |||||||||||    
T  28256480 gtcaaatatcatatttgatccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtt 28256568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 36566265 - 36566353
Alignment:
Q  241 gtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||| |||||||||||||||||| ||||| |   ||||||||| |||||||||  ||||||| || |||||| ||||||||    
T  36566265 gtcaaataccacgtttggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtt 36566353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 310
Target Start/End: Original strand, 1440995 - 1441062
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttt 310  Q
    |||||||||| |||| ||||||||||||| ||||| | ||||||||||  ||||||||||||||||||    
T  1440995 caaataccacatttgatccttttagtttgacagaattcccaagttagtattttaagtttcaaaagttt 1441062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 20366033 - 20366123
Alignment:
Q  238 ttggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||| |||||| || ||||||||||||||||||  ||||| |  ||||||||||||||||||||| ||||||| || || ||||||||||||    
T  20366033 ttggccaaatatcatttttggtccttttagttta-cagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtt 20366123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 21433208 - 21433279
Alignment:
Q  258 gtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||  |||| | ||||||||||| |||||||||||||||||| ||||| || |||||||||    
T  21433208 gtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtt 21433279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 27995149 - 27995220
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||| ||||||||||||||||||| | ||||| ||  ||||||||||||||| ||||||| ||||||||    
T  27995149 caagttaatcctttaagtttcaaaagtatcaaataagtaattttagttgataaactatttcactgttacccc 27995220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 29590711 - 29590770
Alignment:
Q  293 tttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||||||||||||||||||||||| ||| ||||||||| ||| | |||||||||||||||    
T  29590711 tttaagtttcaaaagttttaaatatgtcattttagttggtaagctatttcaccgttaccc 29590770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 31893239 - 31893325
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| ||||||| ||||||||||| ||||| |  |||||||||  |||||||||| ||||||| || |||||| ||||||||    
T  31893239 caaataccatttttggttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtt 31893325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 35215380 - 35215290
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    ||||| |||| ||||| |||||| |||||| ||||||||| |||||||| |||||  || ||||||||||||||| ||||||  |||||||    
T  35215380 ttttaatttgacagaatttccaaattagtcttttaagttttaaaagtttcaaataactcattttagttgataaactatttcattgttaccc 35215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 39959329 - 39959243
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||| |||||||||||||||||| ||||| ||  || |||||| ||||| ||| |||||||| |||||| | |||||||||    
T  39959329 caaataccacgtttggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtt 39959243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 1286360 - 1286445
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||||||| ||||||||||||||  |||| || ||| |||||  ||||| |||||||||||| || |||||||||||||||    
T  1286360 aaatatcacttttcgtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtt 1286445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 8040270 - 8040197
Alignment:
Q  254 tttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttag 327  Q
    |||||||||||||||||  | ||| |||||| |||||| |||||||||||||| ||| |||||| |||||||||    
T  8040270 tttggtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttag 8040197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 1349269 - 1349201
Alignment:
Q  261 cttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||| || || ||| ||||||||| ||||||||||||||||||||||||  || ||||||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtt 1349201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 1441455 - 1441407
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  1441455 aagtttcaaataggtccttttagttgataaactatttcactgttacccc 1441407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 5559679 - 5559631
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  5559679 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 5559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 8040169 - 8040121
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  8040169 aagtttcaaataggtccttttagttgatgaactatttcaccgttacccc 8040121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 39958789 - 39958837
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  39958789 aagtttcaaataggtccttttagttgataaactatttcaccattacccc 39958837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 23150731 - 23150790
Alignment:
Q  286 ttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcacc 345  Q
    |||||| |||||||||||||||||| |||||  || ||||||||||||||| ||||||||    
T  23150731 ttagtcttttaagtttcaaaagtttcaaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 27995050 - 27995133
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    |||||| ||| |||||||||||||||||| ||||| |  |||||||||  |||||||||||||| ||| |||||| || |||||    
T  27995050 caaatatcacgtttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcatttta 27995133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 42990563 - 42990658
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttaccc 352  Q
    |||| |||||||| | ||||| || ||||||| |  ||||||||| ||||||||||| || ||| |||||||||||| || |||| ||||||||||    
T  42990563 ggtcattttagttcgacagaattttcaagttaattttttaagttttaaaagttttaattatgtcattttagttgatacactattttaccgttaccc 42990658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 5805728 - 5805643
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||| || |||||||||||||||||| || |||||  ||||||||| |||||||||  ||||||| || || ||||||||||||    
T  5805728 caaatactacctttggtccttttagtttgaca-aaattttaagttagtcatttaagttttgaaagtttcaattatgtccttttagtt 5805643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 19925170 - 19925239
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||| || || |||||| ||||||||||||||||||||| | | ||||||| ||||||||||    
T  19925170 tccttttagtttgacacaatttccaa-ttagtcctttaagtttcaaaaatatcaaataggaccttttagtt 19925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 21433391 - 21433337
Alignment:
Q  262 ttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaata 316  Q
    |||||||||| ||||| | |||||||| ||||||||||||||||||||| |||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaata 21433337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 22876987 - 22876903
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||| ||||||||||||| || || |||||||||| |  |||||||||| ||||||| || || ||| ||||||||    
T  22876987 aaataccacttttgatccttttagtttgacataatttccaagttaat-ttttaagtttcgaaagtttcaattaagtcattttagtt 22876903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 33235024 - 33235105
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttt 325  Q
    ||||| |||||||| || |||||||||| ||||| |  ||||||| |||||||| ||| |||||||| || |||||||||||    
T  33235024 aaatatcacttttgttcattttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtcctttt 33235105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 40904754 - 40904823
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||||||||||||| || || || ||| |||||| ||||||||| |||||||| |||||| ||||||||    
T  40904754 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatcctttta 40904823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 42991028 - 42990983
Alignment:
Q  308 ttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  42991028 ttttaaataggtctttttagttgataaactatttcaccgtttcccc 42990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 31893537 - 31893489
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    ||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  31893537 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaa 31893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 38453022 - 38453100
Alignment:
Q  161 aattgctcttctcccatttggttttgctcattccccttttacttttgtgcctat--gagctaactcacgctgaaaaatgt 238  Q
    ||||||||||||||| ||||||||||||| ||| || ||| |||||||||||||  |||  |||||||| ||||||||||    
T  38453022 aattgctcttctcccttttggttttgctccttctcc-tttgcttttgtgcctatgggagtcaactcacgttgaaaaatgt 38453100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 329
Target Start/End: Original strand, 1346476 - 1346555
Alignment:
Q  250 cacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| ||||||||||||| ||||| |   |||||||| ||||||||||| ||||||| || ||  |||||||||||    
T  1346476 cacttttgatccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtt 1346555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 329
Target Start/End: Original strand, 33879440 - 33879471
Alignment:
Q  298 gtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||||||||||||    
T  33879440 gtttcaaaagttttaaataggtccttttagtt 33879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 3756377 - 3756411
Alignment:
Q  161 aattgctcttctcccatttggttttgctcattccc 195  Q
    |||||||||||||||||||| ||||||||||||||    
T  3756377 aattgctcttctcccatttgtttttgctcattccc 3756411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 34951521 - 34951451
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||| || || ||| || | ||||||||||||||||||||| | ||||| | ||||||||||    
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtt 34951451  T

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Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 10620284 - 10620239
Alignment:
Q  260 ccttttagtttgtcagaaattccaagttagtcctttaagtttcaaa 305  Q
    |||||||||||  ||||| |||||||| ||||||||||||||||||    
T  10620284 ccttttagtttaacagaatttccaagtaagtcctttaagtttcaaa 10620239  T

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Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 19925230 - 19925271
Alignment:
Q  260 ccttttagtttgtcagaaattccaagttagtcctttaagttt 301  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  19925230 ccttttagtttaacagaatttccaagttagtcctttaagttt 19925271  T

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Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 20101813 - 20101897
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||| ||||| || |||||||||| | ||| | ||||||||||  |||||||||| ||||||| || ||| |||||||||||    
T  20101813 aaataccatttttgatcattttagtttgactgaattcccaagttagtt-tttaagtttcgaaagtttcaattagatccttttagtt 20101897  T

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Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 21412856 - 21412941
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| || |||| |||||||||||||| ||||| |   |||||| ||||||||||||  ||||||| || ||| |||||||||||    
T  21412856 aaatatcatttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtt 21412941  T

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Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 21413014 - 21413047
Alignment:
Q  282 caagttagtcctttaagtttcaaaagttttaaat 315  Q
    |||||||||| |||||||||||||||||||||||    
T  21413014 caagttagtcttttaagtttcaaaagttttaaat 21413047  T

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Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 31893485 - 31893437
Alignment:
Q  258 gtccttttagtttgtcagaaattc-caagttagtcctttaagtttcaaaa 306  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||    
T  31893485 gtccttttagtttgaca-aaattctcaagttagtcctttaagtttcaaaa 31893437  T

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Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 39958677 - 39958762
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| || ||||||||||||||||||| || || ||  ||||||||| ||||||| || ||||||| || || ||| ||||||||    
T  39958677 aaatatcatttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtt 39958762  T

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Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 326
Target Start/End: Complemental strand, 21413076 - 21413048
Alignment:
Q  298 gtttcaaaagttttaaataggtcctttta 326  Q
    |||||||||||||||||||||||||||||    
T  21413076 gtttcaaaagttttaaataggtcctttta 21413048  T

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Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 29591083 - 29591047
Alignment:
Q  290 tcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  29591083 tcctttaagtttcaaaagttttaaataagtcatttta 29591047  T

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Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 271
Target Start/End: Complemental strand, 31176085 - 31176057
Alignment:
Q  243 caaataccacttttggtccttttagtttg 271  Q
    |||||||||||||||||||||||||||||    
T  31176085 caaataccacttttggtccttttagtttg 31176057  T

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Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 35600078 - 35600118
Alignment:
Q  289 gtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||| | ||||| ||||||||||||    
T  35600078 gtcctttaagtttcaaaagtctcaaataagtccttttagtt 35600118  T

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Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 41909246 - 41909282
Alignment:
Q  150 aattccatgaaaattgctcttctcccatttggttttg 186  Q
    |||| |||||||||||||||||||||||||| |||||    
T  41909246 aatttcatgaaaattgctcttctcccatttgtttttg 41909282  T

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Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 42889034 - 42888994
Alignment:
Q  289 gtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||| ||||| ||| ||||||||    
T  42889034 gtcctttaagtttcaaaagtttcaaataagtcattttagtt 42888994  T

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Target: scaffold0019 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 124129 - 124218
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  124129 ggtcaaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtt 124218  T

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Target: scaffold0019; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 124492 - 124406
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||||||||||| |||||  | || | |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  124492 caaataccacttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtt 124406  T

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Target: scaffold0019; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 124418 - 124346
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| || |||||| ||||||||    
T  124418 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtt 124346  T

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Target: scaffold0746 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 596 - 500
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||| |||| ||||| |  |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||    
T  596 ggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccc 500  T

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Target: scaffold0746; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 11 - 96
Alignment:
Q  244 aaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||| ||| |||||||||||||||||| || || |  ||||||||||||| |||||||||||||||||||||  |||||||||||    
T  11 aaatatcacatttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtt 96  T

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Target: scaffold0746; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 673 - 587
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    |||||||||||||  |||||||||||| ||||  |||| || ||||||||||||||||||||  ||||||| || ||||||||||||    
T  673 ggtcaaataccacaattggtccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtcctttta 587  T

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Target: scaffold0746; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 86 - 176
Alignment:
Q  259 tccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttac 350  Q
    ||||||||||||| | ||| | | ||||||||  ||||||||| |||||||| ||||| ||| ||||||||||||||| ||||||| |||||    
T  86 tccttttagtttgaccgaattcctaagttagta-tttaagtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 176  T

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Target: scaffold0070 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 28607 - 28703
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||||||| |||| ||||| |  ||||||||||||||||  ||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||    
T  28607 ggtccttttaatttgacagaattctcaagttagtcctttaaaattcaaaagtttcaaataggtcattttagttgataaactatttcactgttacccc 28703  T

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Target: scaffold0070; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 28530 - 28616
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    |||||||||||||  |||||||||||| |||| ||||| |||||||||||||||||||||||  ||||||| || ||||||||||||    
T  28530 ggtcaaataccacaattggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtcctttta 28616  T

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Target: scaffold0041 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 45340 - 45252
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||||||||||||| ||||||||| ||||| || || |  |||||||||| ||||||||| |||||||| || |||||||||||||||    
T  45340 ggtcaaataccacttt-ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtt 45252  T

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Target: scaffold0041; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 45264 - 45195
Alignment:
Q  257 ggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtcctttta 326  Q
    ||||||||||||||| || || || ||| |||||| ||||||||| |||||||| |||||| ||||||||    
T  45264 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatcctttta 45195  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 10008 - 9922
Alignment:
Q  243 caaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    |||||| ||| ||| |||||||||||||| ||||| |  ||||||||| ||||||||||| ||||||| || ||| |||||||||||    
T  10008 caaatatcacgtttcgtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtt 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 9380 - 9469
Alignment:
Q  240 ggtcaaataccacttttggtccttttagtttgtcagaaattccaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 329  Q
    ||||||||| || |||| |||||||||||||| ||||| |   ||||||||| ||||||||||  |||||| || |||||||||||||||    
T  9380 ggtcaaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtt 9469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 9496 - 9544
Alignment:
Q  305 aagttttaaataggtccttttagttgataaacaatttcaccgttacccc 353  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  9496 aagtttcaaataggtccttttagttgataaactatttcactgttacccc 9544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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