View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12917_low_1 (Length: 1205)

Name: NF12917_low_1
Description: NF12917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12917_low_1
NF12917_low_1
[»] chr6 (67 HSPs)
chr6 (300-955)||(24934439-24935099)
chr6 (159-955)||(24738625-24739422)
chr6 (305-955)||(21160197-21160852)
chr6 (490-955)||(24941972-24942442)
chr6 (305-955)||(29953266-29953921)
chr6 (305-922)||(29949469-29950091)
chr6 (247-889)||(24897915-24898557)
chr6 (305-948)||(30053206-30053855)
chr6 (305-760)||(30135092-30135553)
chr6 (245-922)||(30149332-30150011)
chr6 (956-1182)||(18131782-18132008)
chr6 (956-1182)||(18132988-18133214)
chr6 (955-1179)||(21535698-21535922)
chr6 (955-1157)||(21395590-21395792)
chr6 (1085-1182)||(7033443-7033540)
chr6 (450-902)||(30577485-30577942)
chr6 (720-955)||(30154272-30154507)
chr6 (578-922)||(29348448-29348792)
chr6 (171-293)||(24942564-24942686)
chr6 (958-1062)||(7033339-7033443)
chr6 (636-757)||(30029318-30029439)
chr6 (636-757)||(30154581-30154702)
chr6 (636-922)||(29887102-29887388)
chr6 (579-730)||(30118592-30118743)
chr6 (624-730)||(24730852-24730958)
chr6 (624-730)||(28926443-28926549)
chr6 (624-730)||(29905636-29905742)
chr6 (636-761)||(16702063-16702188)
chr6 (621-729)||(30126948-30127056)
chr6 (612-691)||(29366305-29366384)
chr6 (611-730)||(29898074-29898193)
chr6 (624-730)||(29073760-29073866)
chr6 (624-730)||(29078524-29078630)
chr6 (624-730)||(29106333-29106439)
chr6 (624-901)||(30060058-30060335)
chr6 (590-694)||(15714854-15714958)
chr6 (626-730)||(30061893-30061997)
chr6 (849-955)||(24884912-24885017)
chr6 (365-459)||(24942447-24942541)
chr6 (624-922)||(29882240-29882538)
chr6 (624-922)||(29909396-29909694)
chr6 (578-730)||(29357829-29357981)
chr6 (636-747)||(24271855-24271966)
chr6 (624-691)||(24890142-24890209)
chr6 (636-691)||(29835251-29835306)
chr6 (636-691)||(29866685-29866740)
chr6 (636-691)||(29894589-29894644)
chr6 (30-148)||(6841890-6842008)
chr6 (609-691)||(29929309-29929391)
chr6 (636-693)||(15727097-15727154)
chr6 (636-740)||(30029125-30029229)
chr6 (305-468)||(15714564-15714727)
chr6 (625-747)||(24263649-24263771)
chr6 (624-730)||(29211289-29211395)
chr6 (824-912)||(24272043-24272131)
chr6 (839-890)||(24730692-24730743)
chr6 (642-693)||(29889764-29889815)
chr6 (996-1074)||(4303035-4303113)
chr6 (824-922)||(24263848-24263946)
chr6 (621-691)||(29099379-29099449)
chr6 (621-691)||(29116297-29116367)
chr6 (848-922)||(29929078-29929152)
chr6 (104-145)||(10359679-10359720)
chr6 (371-428)||(16701793-16701850)
chr6 (824-901)||(16702242-16702319)
chr6 (645-730)||(29876822-29876907)
chr6 (397-462)||(30029618-30029683)
[»] chr4 (8 HSPs)
chr4 (305-955)||(44262165-44262820)
chr4 (956-1182)||(11962017-11962243)
chr4 (1041-1126)||(45638746-45638831)
chr4 (956-1127)||(3567008-3567179)
chr4 (38-114)||(231991-232067)
chr4 (30-145)||(49708659-49708774)
chr4 (29-114)||(32449347-32449432)
chr4 (39-112)||(19129556-19129630)
[»] scaffold0110 (1 HSPs)
scaffold0110 (245-955)||(43384-44096)
[»] chr5 (11 HSPs)
chr5 (956-1182)||(22950250-22950476)
chr5 (956-1182)||(19934543-19934769)
chr5 (956-1182)||(29526038-29526265)
chr5 (956-1181)||(39701588-39701817)
chr5 (956-1182)||(29527251-29527478)
chr5 (956-1181)||(39702818-39703047)
chr5 (997-1165)||(41050968-41051141)
chr5 (955-1066)||(19139374-19139485)
chr5 (854-956)||(20888506-20888608)
chr5 (17-110)||(326202-326295)
chr5 (30-144)||(19854336-19854450)
[»] chr3 (15 HSPs)
chr3 (404-945)||(24226602-24227148)
chr3 (955-1181)||(54994597-54994823)
chr3 (956-1181)||(7197700-7197929)
chr3 (955-1167)||(48637537-48637753)
chr3 (994-1176)||(2386338-2386520)
chr3 (956-1133)||(45826152-45826329)
chr3 (959-1167)||(592499-592711)
chr3 (956-1164)||(40976783-40977002)
chr3 (989-1119)||(51274436-51274566)
chr3 (636-945)||(24219143-24219452)
chr3 (17-145)||(32355863-32355992)
chr3 (362-484)||(11991560-11991682)
chr3 (78-131)||(55124427-55124480)
chr3 (104-144)||(42996333-42996373)
chr3 (78-144)||(11267668-11267734)
[»] chr1 (15 HSPs)
chr1 (956-1182)||(8089719-8089945)
chr1 (956-1182)||(10582687-10582913)
chr1 (956-1182)||(10583893-10584119)
chr1 (956-1174)||(49122123-49122341)
chr1 (989-1182)||(49121926-49122119)
chr1 (956-1182)||(49123249-49123475)
chr1 (956-1168)||(8788533-8788749)
chr1 (989-1158)||(23541003-23541176)
chr1 (404-730)||(17251310-17251641)
chr1 (958-1075)||(23540880-23541001)
chr1 (30-146)||(22425455-22425571)
chr1 (30-145)||(22862534-22862649)
chr1 (72-145)||(5101827-5101900)
chr1 (625-760)||(10130104-10130239)
chr1 (640-729)||(41198739-41198828)
[»] chr7 (8 HSPs)
chr7 (956-1182)||(6081188-6081414)
chr7 (955-1182)||(6082395-6082622)
chr7 (550-740)||(8651253-8651447)
chr7 (956-1074)||(17901154-17901274)
chr7 (856-955)||(13093653-13093752)
chr7 (378-476)||(8651524-8651622)
chr7 (78-131)||(12732260-12732313)
chr7 (39-115)||(14735385-14735462)
[»] scaffold0011 (2 HSPs)
scaffold0011 (955-1182)||(205588-205815)
scaffold0011 (955-1136)||(211665-211846)
[»] scaffold0018 (1 HSPs)
scaffold0018 (989-1182)||(177896-178089)
[»] scaffold0227 (2 HSPs)
scaffold0227 (956-1181)||(11060-11289)
scaffold0227 (956-1182)||(12212-12437)
[»] chr2 (6 HSPs)
chr2 (945-1182)||(33789866-33790106)
chr2 (1000-1169)||(12324849-12325022)
chr2 (46-148)||(6182088-6182190)
chr2 (1051-1158)||(18955376-18955485)
chr2 (30-144)||(5142488-5142602)
chr2 (72-144)||(6183091-6183163)
[»] scaffold0026 (2 HSPs)
scaffold0026 (956-1167)||(80715-80930)
scaffold0026 (966-1133)||(79557-79724)
[»] chr8 (5 HSPs)
chr8 (967-1165)||(40254408-40254605)
chr8 (300-679)||(9782587-9782978)
chr8 (960-1068)||(21661182-21661290)
chr8 (956-1133)||(2411061-2411237)
chr8 (956-1027)||(26246968-26247039)
[»] scaffold0572 (1 HSPs)
scaffold0572 (639-811)||(3149-3321)
[»] scaffold0237 (1 HSPs)
scaffold0237 (624-912)||(22158-22446)
[»] scaffold0014 (5 HSPs)
scaffold0014 (636-760)||(121388-121512)
scaffold0014 (305-446)||(121052-121193)
scaffold0014 (858-922)||(137179-137243)
scaffold0014 (848-922)||(140103-140177)
scaffold0014 (824-913)||(121567-121656)
[»] scaffold1052 (2 HSPs)
scaffold1052 (17-144)||(330-457)
scaffold1052 (72-145)||(1542-1615)
[»] scaffold0652 (1 HSPs)
scaffold0652 (636-760)||(1203-1327)
[»] scaffold0573 (1 HSPs)
scaffold0573 (624-730)||(4134-4240)
[»] scaffold0054 (1 HSPs)
scaffold0054 (848-922)||(53716-53790)
[»] scaffold0654 (1 HSPs)
scaffold0654 (636-760)||(1128-1252)
[»] scaffold0019 (2 HSPs)
scaffold0019 (639-693)||(126034-126088)
scaffold0019 (858-935)||(126253-126330)
[»] scaffold0086 (2 HSPs)
scaffold0086 (639-748)||(31225-31334)
scaffold0086 (824-901)||(31401-31478)
[»] scaffold0177 (2 HSPs)
scaffold0177 (638-758)||(27322-27442)
scaffold0177 (365-447)||(27638-27720)
[»] scaffold0725 (1 HSPs)
scaffold0725 (30-145)||(5768-5883)
[»] scaffold2177 (1 HSPs)
scaffold2177 (329-466)||(171-307)
[»] scaffold0429 (1 HSPs)
scaffold0429 (639-692)||(6231-6284)
[»] scaffold0051 (1 HSPs)
scaffold0051 (858-923)||(48033-48098)


Alignment Details
Target: chr6 (Bit Score: 365; Significance: 0; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 300 - 955
Target Start/End: Complemental strand, 24935099 - 24934439
Alignment:
Q  300 tagcgatcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgca 399  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| | | | || ||||||||| ||| |||||||| | |||||||| |||| ||  ||||    
T  24935099 tagcaatcatttcacgtagaagtttcaccgccttatcattcttatcgttctcgaacaaagcacggacaagagtttcataagttacagcatcaggtatgca 24935000  T
Q  400 accattgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaa 499  Q
    ||| ||||||||||||| ||||| |||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  24934999 accgttgtcttccatttttgacactaaggacagtgcttcatcaaacaagccctctttacaaagcccattgaccatcacattatacattttaacatctaaa 24934900  T
Q  500 tgatagaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatat 594  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||     ||||||||| ||||    
T  24934899 tgatagcccttaataagaagatcctgataaaccgcttgtgcatccttaagtcttccatttttgcatagtccatcaacaagtatagtgtaagtataaatat 24934800  T
Q  595 ttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgat 694  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24934799 ttggctgaattccttggtctttgatcttcgttattaatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaactgtaagtgat 24934700  T
Q  695 cacatcagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtat 794  Q
    |||||| | |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  24934699 cacatcggcaggttggcctctattatgcatctcatttacaagatcccaagcatcagagattctcccatatttgagaagaccatcgataagtgaattgtat 24934600  T
Q  795 gttacaatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacat 894  Q
    |||||| ||| |||||||||  ||||   ||||| |||||||| |||||| ||||||| ||||||||||||| |||| |||| |||||| ||||| | |     
T  24934599 gttacagtattaggagccatacttttggaatgcatttctttgaagagattaacggcttcatccaccattttagtcttgcatagtccattaatcataatac 24934500  T
Q  895 tgtagctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtggc 955  Q
    ||||||| ||||||| ||||| |||||| ||| |||| |||||||| || ||| |||||||    
T  24934499 tgtagctttgaacatcaggagtcactccccttctagccatagtgttgaacacaaatgtggc 24934439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 159 - 955
Target Start/End: Original strand, 24738625 - 24739422
Alignment:
Q  159 ttgcacagtccaatttactttttgtgtaacagactaaaaataaaaggaaagaaagattggaaggtcttattagaattcaaactacgaaattgcaactaga 258  Q
    ||||| |||||||||||||||||  || ||||||||| |||||||||||| |||||||||| |||  ||||  ||||  || ||| |||||| ||||| |    
T  24738625 ttgcatagtccaatttactttttacgtgacagactaacaataaaaggaaataaagattggatggttgtattgaaattggaaataccaaattgtaactaaa 24738724  T
Q  259 aaacatctcaccttgttttactcttacagtagaccgctatatagcgatcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaa 358  Q
    || ||||||||||||||||| ||||| |||||||| |||    || ||||||||||| ||||||||||| |||||||||||| ||| | |||||||||||    
T  24738725 aagcatctcaccttgttttattcttatagtagacctcta----gcaatcatttcacgaagaagttccactgccttatcattcatgtcgttttcaaacaaa 24738820  T
Q  359 gcatggataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttac 458  Q
    ||| |||||||| |||  |||||||||  ||  || |||||||||||||||||||||| |||||||||||||| ||| | ||| ||||||  ||||| ||    
T  24738821 gcacggataagaatttcgaaagttacaggattaggggtgcaaccattgtcttccatttttgacagtaaggacaatgctttatcgaacaagctctcttaac 24738920  T
Q  459 aaagcccattaaccatcacattatacattggaacatctaaatgatagaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccact 558  Q
    |||| ||||||| ||  ||| |||||||    || |||||||||||| | ||||  | ||||| |||||||||| |||| || ||||| | ||||||| |    
T  24738921 aaaggccattaatcagaacagtatacatcctcacgtctaaatgatagcctttaatcaaaagaatctgataaacctcttgcgcgtccttgagtcttccatt 24739020  T
Q  559 tttgcgtagtccatcaacaagt-----gtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctga 653  Q
    ||||| ||  ||||||||||||     ||| ||||| ||||  |||| ||||| |||||||||||||||||| | |||||||||||||||||||||||||    
T  24739021 tttgcataaaccatcaacaagtattgtgtatgtatatatatccggctgaattccttggtctttgatcttcgtaagtaatgtgattgccttgtcaacctga 24739120  T
Q  654 tggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagatcccaagcatcagaga 753  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||    
T  24739121 tggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagcaggttggcctctattatgcatctcatttacaagatcccaagcatcaaaga 24739220  T
Q  754 ttctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttg 853  Q
    ||||||||  ||||  ||||||||||||||||||| ||||||||||| ||| |||||||||  ||||   ||||| ||||||||||||||| |||||||     
T  24739221 ttctcccagatttgtgaagaccatcgataagtgaactgtatgttacagtattaggagccatacttttggaatgcatttctttgaggagattaacggcttc 24739320  T
Q  854 atccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtg 953  Q
    ||||||||||||| ||||||||| |||||| ||||||||| | ||||||||||||| ||||| |||||| ||| |||| |||||||| || ||| |||||    
T  24739321 atccaccattttagtcttacatagtccattaatcatgacactatagctatgaacatcaggagtcactccccttctagccatagtgttgaacacaaatgtg 24739420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 305 - 955
Target Start/End: Original strand, 21160197 - 21160852
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||| ||| ||||||||||| |||||||||||| ||| | |||||||||||||| |||||||| |||  |||||||||  ||  || ||||||||||    
T  21160197 atcattttacgaagaagttccactgccttatcattcatgtcgttttcaaacaaagcacggataagaatttcgaaagttacaggattaggggtgcaaccat 21160296  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgata 504  Q
    |||||| ||||| |||||||||||| | ||| | ||| ||||||  |||||||||||| ||||||| ||| ||| |||||||    || |||||||||||    
T  21160297 tgtctttcatttttgacagtaaggataatgctttatcgaacaagctctctttacaaaggccattaatcataacagtatacatcctcacgtctaaatgata 21160396  T
Q  505 gaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatatttggc 599  Q
    | | ||||  | ||||| |||||| ||| |||| || ||||||| ||||||| |||||| ||  ||||||||||||     ||| ||||| ||||  |||    
T  21160397 gcctttaatcaaaagaatctgatagacctcttgcgcgtccttaagtcttccatttttgcataaaccatcaacaagtattgtgtatgtatatatatacggc 21160496  T
Q  600 ttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacat 699  Q
    | ||||| ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21160497 tgaattccttggtcttttatcttcgtaaataatgtgattgccatgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacat 21160596  T
Q  700 cagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttac 799  Q
    ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  21160597 cagcaggttggcctctattatgcatctcatttacaagatcccaagcatcagagattctcccatatttgagaagaccatcgataagtgaattgtatgttac 21160696  T
Q  800 aatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtag 899  Q
    ||||||||||||||||||||||| ||||| |||||| | |||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||| | |||    
T  21160697 aatatcaggagccatgttttttaaatgcatttctttaaagagattaacggcttcatccaccattttattcttacatagtccattaatcatgacagtatag 21160796  T
Q  900 ctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtggc 955  Q
    ||||||||||||| || |||||| ||| || | |||||||| || ||| |||||||    
T  21160797 ctatgaacattagaagtcactccccttctaaccatagtgttgaacacaaatgtggc 21160852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 490 - 955
Target Start/End: Complemental strand, 24942442 - 24941972
Alignment:
Q  490 aacatctaaatgatagaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaa 584  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||     ||||    
T  24942442 aacatctaaatgatagcccttaaaaagaagatactgataaaccgcttgtgcatgcttaaatcttccatttttgcatagtccatcaacaagtatagtgtaa 24942343  T
Q  585 gtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaat 684  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24942342 gtatacatatttggctgaattccttggtctttgatcttcattaataatgtaattgccttgtcaacctgatggtttttgaacaaagcatccaataaggaat 24942243  T
Q  685 tgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataag 784  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||   ||||  ||| ||||| |||||    
T  24942242 tgtacgtgatcacatcagcaggttggcctctattatgcatctcatctataagatcccaaacatcagagattcttcccgatttgcaaagtccatcaataag 24942143  T
Q  785 tgaattgtatgttacaatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccattt 884  Q
     ||| |||||  || ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||    
T  24942142 cgaactgtatactataatatcaggagccatgtttcttatatgcaattctttgaagagattgacggcttcatccaccattttattcttacataatccagtt 24942043  T
Q  885 atcatgacattgtagctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtggc 955  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  24942042 atcatgacactgtagctatgaagattaggagccactcctctttgagccatagtgttgaatacatatgtggc 24941972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 305 - 955
Target Start/End: Original strand, 29953266 - 29953921
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||||||| |||||||  ||||||||||||||||||||| |||| |||||||||   |||||||||||  ||||||   |||| || ||||||||||    
T  29953266 atcatttcacgaagaagtttaacagccttatcattcttgttgttttcgaacaaagcacaaataagagtttggtaagttatcgcatctggggtgcaaccat 29953365  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgata 504  Q
    |||||||||||| |||||||||||||| ||| || ||||| ||  | |||||||||| | |||||||||||||||||||||| | ||||| |||| ||||    
T  29953366 tgtcttccatttttgacagtaaggacaatgcctcgtcaaataaaccttctttacaaaactcattaaccatcacattatacatcgaaacatttaaaggata 29953465  T
Q  505 gaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatatttggc 599  Q
      |||||   |||||| | ||||||| | || ||||||||  || ||||||| |||||| ||| ||||||||||||     ||| |||||||||||||||    
T  29953466 acccttagtcagaagatcatgataaatctctcgtgcatccgcaagtcttccatttttgcatagcccatcaacaagtatagtgtatgtatacatatttggc 29953565  T
Q  600 ttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacat 699  Q
    | ||| | ||||||||| |||||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29953566 tgaatcccttggtctttcatcttctttaataatgcaatcgccttgtcaacctgatggtttttgcacaaagcatccaataaagaattgtaagtgatcacat 29953665  T
Q  700 cagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttac 799  Q
     |   ||||| | ||||||||||||||||||||||||||||||| |||||||||| |||||   ||||  ||| ||||| ||||| |||||||||| ||     
T  29953666 taaccggttgacatctattatgcatctcatctataagatcccaaacatcagagatgctccctgatttgcaaagtccatcaataagagaattgtatgatat 29953765  T
Q  800 aatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtag 899  Q
      ||||||||| ||| ||| |   |||||  ||||||| ||||||  | |||| || |||||||||||||||||||||||| || |||||||||||||||    
T  29953766 tgtatcaggagtcatatttctggaatgcatatctttgaagagattcgcagcttcattcaccattttattcttacataatccgttaatcatgacattgtag 29953865  T
Q  900 ctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtggc 955  Q
    |||||||  | ||||| |||||| |||| |||||||||||| |||| |||||||||    
T  29953866 ctatgaagttcaggagtcactcccctttgagcaatagtgttgaatatatatgtggc 29953921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 305 - 922
Target Start/End: Original strand, 29949469 - 29950091
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||||||| |||||||  ||||||||||||||||||||| |||| |||||||||   |||||||||||  ||||||   |||  || ||||||||||    
T  29949469 atcatttcacgaagaagtttaacagccttatcattcttgttgttttcgaacaaagcacaaataagagtttggtaagttatcgcatttggggtgcaaccat 29949568  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgata 504  Q
    |||||||||||| |||||||||||||| ||| || ||||| ||  | |||||||||| | |||||||||||||||||||||| | ||||| |||| ||||    
T  29949569 tgtcttccatttttgacagtaaggacaatgcctcgtcaaataaaccttctttacaaaactcattaaccatcacattatacatcgaaacatttaaaggata 29949668  T
Q  505 gaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatatttggc 599  Q
      |||||   |||||| | ||||||| | |||||||||||| || ||||||| |||||| ||||||||||||||||     ||| |||||||||||||||    
T  29949669 acccttagtcagaagatcatgataaatctcttgtgcatcctcaagtcttccatttttgcatagtccatcaacaagtatagtgtatgtatacatatttggc 29949768  T
Q  600 ttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacat 699  Q
    | ||||| ||||||||| |||||  |||||||||  || |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  29949769 tgaattccttggtcttttatcttttttaataatgcaatcgccttgtcaacctgatggtttttgcataaagcatctaataaagaattgtaagtgatcacat 29949868  T
Q  700 cagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttac 799  Q
     || |||||||||| ||| |||||||||  | | |||||||||| ||||||||||||||||   ||||  ||| ||||| ||||| |||||||||| |||    
T  29949869 tagcaggttggcctatatcatgcatctcgacaagaagatcccaaacatcagagattctccctgatttgcaaagtccatcaataagagaattgtatgatac 29949968  T
Q  800 aatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtag 899  Q
    | |||| |||| ||| ||  |   ||||| |||||||| ||||||  | |||| || |||||||||||||||||||||||| || ||||||| |||||||    
T  29949969 agtatctggagtcatattactggaatgcatttctttgaagagattcgcagcttcattcaccattttattcttacataatccgttaatcatgatattgtag 29950068  T
Q  900 ctatgaacattaggagccactcc 922  Q
    |||  ||||||||||| ||||||    
T  29950069 ctaaaaacattaggagtcactcc 29950091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 247 - 889
Target Start/End: Complemental strand, 24898557 - 24897915
Alignment:
Q  247 attgcaactagaaaacatctcaccttgttttactcttacagtagaccgctatatagcgatcatttcacgtagaagttccacagccttatcattcttgttg 346  Q
    |||| |||||||||||| ||||| | ||||||||||||||||||||| ||| | |||    |||||||| || |||| ||| |||||||||||| ||| |    
T  24898557 attgtaactagaaaacaactcac-tagttttactcttacagtagacctctagaaagc----atttcacggaggagtttcacggccttatcattcatgtcg 24898463  T
Q  347 ctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaaaca 446  Q
     |||  ||||||||| ||||||||||||   ||||||||||||| || ||||||||||||||||||||||| |||||||   ||| ||| || |||||||    
T  24898462 tttttgaacaaagcacggataagagttttgtaagttacaacatcaggtgtgcaaccattgtcttccatttcggacagtacaaacaatgcttcgtcaaaca 24898363  T
Q  447 agtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgatagaccttaacaagaagaacctgataaaccgcttgtgcatcctt 546  Q
    || ||||||||||||||||||||| ||| ||||||| |||   | |||  ||||||||| ||||||| | |||| || |||||||| |||||||||||||    
T  24898362 agccctctttacaaagcccattaatcatgacattatgcatgcaagcattaaaatgatagcccttaaccataagatcccgataaacctcttgtgcatcctt 24898263  T
Q  547 aaatcttccacttttgcgtagtccatcaacaag-----tgtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgcc 641  Q
    || ||||||| |||||| |||||||||||||||     |||| ||  |||||| ||| | |||||   |||||||||||||| | ||||| |  ||||||    
T  24898262 aagtcttccatttttgcatagtccatcaacaagcattgtgtatgtgaacatatctggttcaattccccggtctttgatcttcttcaataacgcaattgcc 24898163  T
Q  642 ttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagatccc 741  Q
    |||||||| |||||||||||  |||| ||||||||||| ||  ||||| |||| |  ||||   |||| ||||||| |||||| ||||||||||||||||    
T  24898162 ttgtcaacttgatggtttttaaacaatgcatccaataacgaggtgtaaatgattatgtcagcttgttgacctctatcatgcatatcatctataagatccc 24898063  T
Q  742 aagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttatatgcaattctttgaggag 841  Q
    || ||||||| ||| ||||   ||||  ||| ||||| ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| |||    
T  24898062 aaacatcagatattttccccgatttgcaaagtccatcaataagtgaactgtatgctacaatatcaggagccatgttttttaaatgcaattctttgaagag 24897963  T
Q  842 attgacggcttgatccaccattttattcttacataatccatttatcat 889  Q
    |||||| |||| ||||||||||||||||||||||||||| || |||||    
T  24897962 attgacagcttcatccaccattttattcttacataatccgttaatcat 24897915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 305 - 948
Target Start/End: Complemental strand, 30053855 - 30053206
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||||||| ||||||  ||  |||||||||||||||| | |||| |||||||||   ||||||||||   | |||||| |||| ||| ||||||| |    
T  30053855 atcatttcacgaagaagtgtcagcgccttatcattcttgtcgttttcgaacaaagcacaaataagagtttcgtatgttacagcatcaggcatgcaaccgt 30053756  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccatt-aaccatcacattatacattggaacatctaaatgat 503  Q
    |||||||||||| ||| |||||||||| ||| ||||| || ||  ||||||||||||||||||| || ||||||||||||||||  || || |||  | |    
T  30053755 tgtcttccatttgtgagagtaaggacaatgcttcatcgaaaaaaccctctttacaaagcccatttaatcatcacattatacattctaatatttaatgggt 30053656  T
Q  504 agaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagtgt-----aagtatacatatttgg 598  Q
    || |||||   |||||| ||||||||| |  |||||||||||||| ||||||| |||||| ||||||||||||||||||     | ||| |||||| |||    
T  30053655 agcccttacatagaagatcctgataaatcctttgtgcatccttaagtcttccatttttgcatagtccatcaacaagtgttgtgtatgtaaacatatctgg 30053556  T
Q  599 cttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcaca 698  Q
    || ||||| || |||||| ||||||||||| || |  ||||||||||||||||||||||||||||||||  |||  ||||| |||||||||||||| | |    
T  30053555 ctgaattccttcgtctttcatcttcgttaacaacgcaattgccttgtcaacctgatggtttttgcacaatccatataataaagaattgtaagtgattata 30053456  T
Q  699 tcagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgtta 798  Q
    | ||  ||||| || | |||||  || |||||||||||||||||| ||||||||||||| ||   ||||  ||| ||||| ||||||||| ||||||| |    
T  30053455 ttagctggttgaccacaattataaatatcatctataagatcccaaacatcagagattcttcccgatttgcaaagtccatcaataagtgaactgtatgtaa 30053356  T
Q  799 caatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgta 898  Q
    || ||| ||||| ||||||||||| ||||| ||||||||  || || || |||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  30053355 cagtattaggagtcatgttttttaaatgcatttctttgaaaagtttcacagcttcatccaccattttattcttacataatccattaatcatgacaatgta 30053256  T
Q  899 gctatgaacattaggagccactcctcttttagcaatagtgttaaatacat 948  Q
    ||||||||||||||||| |||||| |||  || ||||||||| |||||||    
T  30053255 gctatgaacattaggagtcactccccttagagaaatagtgttgaatacat 30053206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 305 - 760
Target Start/End: Complemental strand, 30135553 - 30135092
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||||||  ||||||| ||| ||||||||||||||     |||  || |||||| |||||| | |||   ||||||||||||| || ||||||   |    
T  30135553 atcatttcacaaagaagtttcactgccttatcattcttaacatttttgaataaagcacggataacaatttcgtaagttacaacatcaggggtgcaattgt 30135454  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgata 504  Q
    ||| |||||||| ||||| || ||||| ||| |||||||||||  |||||||||| |||| ||||||||||||||||||||||  |||||||||||||||    
T  30135453 tgtgttccatttttgacaatatggacaatgcttcatcaaacaaaccctctttacagagccaattaaccatcacattatacattataacatctaaatgata 30135354  T
Q  505 gaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaa-----gtgtaagtatacatatttggc 599  Q
      ||||||  |||||| | ||||||||||||| ||||||||||| | ||||| |||||| || |||||||||||     ||||| ||||||| |||||||    
T  30135353 tcccttaatcagaagatcttgataaaccgcttttgcatccttaagttttccatttttgcatattccatcaacaagtaatgtgtatgtatacaaatttggc 30135254  T
Q  600 ttaattcattggtctttgatcttcgttaataatgtgattgccttgtc-aacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcaca 698  Q
    | ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30135253 tgaataccttggtctttgatcttcgttaataatgtgattgccttgtcaaacctgatggtttttgcacaaagcatccaataaagaattgtaagtgatcaca 30135154  T
Q  699 tcagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctccc 760  Q
    | || |||||| ||||| | ||||||||||||||||||||||||| |||||||| |||||||    
T  30135153 ttagcaggttgacctctttcatgcatctcatctataagatcccaaacatcagaggttctccc 30135092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 245 - 922
Target Start/End: Complemental strand, 30150011 - 30149332
Alignment:
Q  245 aaattgcaactagaaaacatctcaccttgttttactctt-acagtagaccgctatatagcgatcatttcacgtagaagttccacagccttatcattcttg 343  Q
    |||||| | ||||||||||||| |||| ||||||||||| | |||||||| |||    || ||||||||||| | || || ||| |||||||||||  ||    
T  30150011 aaattgtacctagaaaacatcttacctagttttactctttagagtagacctcta----gcaatcatttcacgaataaatttcaccgccttatcatttctg 30149916  T
Q  344 ttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaa 443  Q
    | |||||||||||||||| | |||| | ||| | |||||||| |||| || |||||||| ||||||| ||||| ||| |||||||||| ||| ||||| |    
T  30149915 tcgctttcaaacaaagcacgaataataatttcataagttacaccatcaggagtgcaaccgttgtctttcatttttgagagtaaggacaatgcttcatcga 30149816  T
Q  444 acaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgatagaccttaacaagaagaacctgataaaccgcttgtgcatc 543  Q
    | ||  | ||||||||||||||||||| ||||||| |||||||   | |||||||||||||| | ||||    |||| || |||||||  ||||||||||    
T  30149815 aaaacccttctttacaaagcccattaatcatcacagtatacatcttagcatctaaatgatagcctttaatcgtaagatcccgataaacttcttgtgcatc 30149716  T
Q  544 cttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgatt 638  Q
    || || ||||||  |||||| ||||||| ||| ||||     ||| | ||||||| |||||| |||||  ||||||||||||||  |||||||||  |||    
T  30149715 ctcaagtcttccgtttttgcatagtccaacaaaaagtatagtgtatgaatacatacttggctgaattccctggtctttgatcttttttaataatgcaatt 30149616  T
Q  639 gccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagat 738  Q
    ||| |||||||||||||||||||||||||  |||| ||||| |||||||||||||| |  || || ||||| ||||||| ||||||||||||||||| ||    
T  30149615 gccctgtcaacctgatggtttttgcacaatccatcaaataaagaattgtaagtgattatgtcggttggttgacctctatcatgcatctcatctataaaat 30149516  T
Q  739 cccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttatatgcaattctttgag 838  Q
    ||||| ||||||| | ||||||   ||||  ||| ||||| ||||| ||||||||||||||| | | ||||  ||| | |||   ||||| ||||||||     
T  30149515 cccaaacatcagatactctccctaatttgcaaagtccatcaataagggaattgtatgttacagtgttaggaatcatatctttcgaatgcatttctttgaa 30149416  T
Q  839 gagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
     ||||| ||||||| ||||||||||||||||||||||||||| || ||||||| ||||||||||  ||||||||||| ||||||    
T  30149415 aagatttacggcttcatccaccattttattcttacataatccgttaatcatgatattgtagctaaaaacattaggagtcactcc 30149332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 956 - 1182
Target Start/End: Original strand, 18131782 - 18132008
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||| ||||||||| ||||||    
T  18131782 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccttccaagtattcgagag 18131881  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18131882 cttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacatagaa 18131981  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  18131982 gtttagtagacagcaattactacacac 18132008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 956 - 1182
Target Start/End: Original strand, 18132988 - 18133214
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | ||||||||||| || ||||||    
T  18132988 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagaattcgagag 18133087  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18133088 cttggtctctccctacctatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacatagaa 18133187  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  18133188 gtttagtagacagcaattactacacac 18133214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 157; E-Value: 7e-83
Query Start/End: Original strand, 955 - 1179
Target Start/End: Complemental strand, 21535922 - 21535698
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | ||||||||||| || |||||    
T  21535922 ctgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagaattcgaga 21535823  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacataga 1154  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  21535822 gcttggtctctccctacctatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaattcctatagctgttacataga 21535723  T
Q  1155 agtttagtagacaacaattactaca 1179  Q
    ||||||||||||| |||||||||||    
T  21535722 agtttagtagacagcaattactaca 21535698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 955 - 1157
Target Start/End: Original strand, 21395590 - 21395792
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    ||||||| || |||||||||||||||||||||  ||||||||| ||||||||||||| | |||| ||||||||  || | ||||||||||| || |||||    
T  21395590 ctgatagaaactgatatcaaaatataaactaacagtaagattataatataatcccaagaaattcaagagtcttggttgtctcccctccaagaattcgaga 21395689  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacataga 1154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||||||    
T  21395690 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctgcatcttatttataatactaaatcctatggctgttacataga 21395789  T
Q  1155 agt 1157  Q
    |||    
T  21395790 agt 21395792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 1085 - 1182
Target Start/End: Original strand, 7033443 - 7033540
Alignment:
Q  1085 caatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaagtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7033443 caatccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacatagaagtttagtagacaacaattactacacac 7033540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 450 - 902
Target Start/End: Original strand, 30577485 - 30577942
Alignment:
Q  450 cctctttacaaagcccattaaccatcacattatacattggaacatctaaatgatagaccttaacaagaagaacctgataaaccgcttgtgcatccttaaa 549  Q
    ||||| ||||||||||||||| ||||||| | |||| |  |||||||||| ||||| ||||||  |||||| | ||| ||| | |||||||||||||||     
T  30577485 cctctctacaaagcccattaatcatcacagtgtacagtctaacatctaaacgatagcccttaatcagaagatcatgaaaaatctcttgtgcatccttaag 30577584  T
Q  550 tcttccacttttgcgtagtccatcaacaag-----tgtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttg 644  Q
    ||||||| ||||||  ||||||||||||||     |||| |||  ||||||||||| || || || |||||||||||| || |||| | | |||||| ||    
T  30577585 tcttccatttttgcacagtccatcaacaagtatattgtatgtaaccatatttggctcaaatcctttgtctttgatctttgtaaatattctaattgccgtg 30577684  T
Q  645 tcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagatcccaag 744  Q
    ||||  |||    ||||||||||| |||  ||||| ||| |||| |||||||||| ||  |   | ||| ||  | |||||||||||||||||||||||     
T  30577685 tcaaaatgaccacttttgcacaaaacatttaataaagaactgtatgtgatcacattagctgaccgacctgtagcacgcatctcatctataagatcccaaa 30577784  T
Q  745 catcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttatatgcaattctttgaggagatt 844  Q
    ||| ||||||||| ||   ||||  ||| || || ||||| | | ||||||||| | ||||||||| |||  |||| |  |||| |||||| | |||| |    
T  30577785 cataagagattcttcccaatttgccaagtccgtcaataagggtactgtatgttatagtatcaggagtcatacttttgaattgcatttctttaaagagaat 30577884  T
Q  845 gacggcttgatccaccattttattcttacataatccatttatcatgacattgtagcta 902  Q
     || |||| |||||||||||||  ||||| ||||||||| ||||| | ||||||||||    
T  30577885 cacagcttcatccaccattttagccttacttaatccattaatcattatattgtagcta 30577942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 720 - 955
Target Start/End: Complemental strand, 30154507 - 30154272
Alignment:
Q  720 tgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgtttt 819  Q
    ||||||||||||||||||| |||| ||||||||||||||||   ||||  ||| || || ||||| ||||||||||||| | ||| ||||| ||   |||    
T  30154507 tgcatctcatctataagataccaaacatcagagattctccccgatttgcaaagcccgtcaataagggaattgtatgttatagtattaggagtcaaacttt 30154408  T
Q  820 ttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccac 919  Q
    |   ||||| |||||| | |||| | || |||| |||||||||||||  ||||||||||||||| ||||||||| |||||||| |||||||||||| |||    
T  30154407 tggaatgcatttctttaaagagaatcacagcttcatccaccattttaaccttacataatccattaatcatgacactgtagctacgaacattaggagtcac 30154308  T
Q  920 tcctcttttagcaatagtgttaaatacatatgtggc 955  Q
    ||| |||  |||||  || |  ||||||||||||||    
T  30154307 tccccttcgagcaagtgtatcgaatacatatgtggc 30154272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 578 - 922
Target Start/End: Original strand, 29348448 - 29348792
Alignment:
Q  578 agtgtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaat 677  Q
    |||||| || ||||||| ||| | ||||| ||  ||||| ||||||||||| || |  ||||||||||||||||||||||||||||| ||||||||||||    
T  29348448 agtgtatgtgtacatatctggttgaattccttcatctttcatcttcgttaacaacgcaattgccttgtcaacctgatggtttttgcataaagcatccaat 29348547  T
Q  678 aaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccat 777  Q
    |  ||||||||||| ||   ||||   |||   ||||||| |||||||||||| |  || | | |||||| ||||||| ||||   |||    | |||||    
T  29348548 atagaattgtaagtaattttatcatgtggtacacctctatcatgcatctcatcgactagcttcaaagcataagagattttccctgatttacacaaaccat 29348647  T
Q  778 cgataagtgaattgtatgttacaatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataa 877  Q
    | ||||| |||||||| ||||| | |||||||   ||||||||   ||||| |||||| | |||||| | ||||| ||| ||| ||||| ||||||| ||    
T  29348648 caataagggaattgtaagttaccacatcaggaataatgtttttgcaatgcatttctttaaagagattcatggcttcatcaacctttttaatcttacaaaa 29348747  T
Q  878 tccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
     || || ||||||| ||||||||| |||||||||| || ||||||    
T  29348748 cccgttaatcatgatattgtagctctgaacattagcagtcactcc 29348792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 24942686 - 24942564
Alignment:
Q  171 atttactttttgtgtaacagactaaaaataaaaggaaagaaagattggaaggtcttattagaattcaaactacgaaattgcaactagaaaacatctcacc 270  Q
    ||||||||||||||||||||||||| ||| |||||||| |||||||||| |||  ||||| ||||  || ||| |||||| ||| ||||| |||||||||    
T  24942686 atttactttttgtgtaacagactaacaatgaaaggaaataaagattggatggttatattaaaattagaaataccaaattgtaacgagaaagcatctcacc 24942587  T
Q  271 ttgttttactcttacagtagacc 293  Q
    |||| ||||||||||| ||||||    
T  24942586 ttgtcttactcttacaatagacc 24942564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 958 - 1062
Target Start/End: Original strand, 7033339 - 7033443
Alignment:
Q  958 ataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagct 1057  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | ||||||||||| || ||| ||||    
T  7033339 ataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagaattcgaaagct 7033438  T
Q  1058 tggtc 1062  Q
    |||||    
T  7033439 tggtc 7033443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 636 - 757
Target Start/End: Complemental strand, 30029439 - 30029318
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||  | |||||||||||||||| | || | ||||||| |||| |||| ||||| ||  |||||||||||||  ||||||||||||||||    
T  30029439 attgccttgtcaagattatggtttttgcacaaaccgtctattaaggaagtgtatgtgaccacattagctggttggcctctatcgtgcatctcatctataa 30029340  T
Q  736 gatcccaagcatcagagattct 757  Q
    ||| ||||||||||| ||||||    
T  30029339 gataccaagcatcagcgattct 30029318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 636 - 757
Target Start/End: Complemental strand, 30154702 - 30154581
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||  | |||||||||||||||| | || | ||||||| |||| |||| ||||| ||  |||||||||||||  ||||||||||||||||    
T  30154702 attgccttgtcaagattatggtttttgcacaaaccgtctattaaggaagtgtatgtgaccacattagctggttggcctctatcgtgcatctcatctataa 30154603  T
Q  736 gatcccaagcatcagagattct 757  Q
    ||| ||||||||||| ||||||    
T  30154602 gataccaagcatcagcgattct 30154581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 636 - 922
Target Start/End: Complemental strand, 29887388 - 29887102
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||| || | |||||  ||||| ||||||| |||||||||||| |  |    
T  29887388 attgccttgtcaacctgatggtttttgcataaagcatctaataaagaactgtaagtaattatatcaggtggttgacctctatcatgcatctcatcgacta 29887289  T
Q  736 gatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgtttttta-tatgcaattctt 834  Q
    | | | |||||| ||||||| ||||   ||||   | ||||| |||||| |||||||| ||||| | |||||||   | ||||| ||  ||||| |||||    
T  29887288 gcttcaaagcataagagattttccccgatttgcacaaaccattgataagggaattgtaagttaccacatcaggaatta-gttttctacaatgcatttctt 29887190  T
Q  835 tgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
      | |||||| | ||||| |||   ||||||| ||||||| |||||||| ||||||| |||||||||   |||||||| || ||||||    
T  29887189 caaagagattcatggcttcatcggtcattttaatcttacaaaatccattaatcatgatattgtagctccaaacattagcagtcactcc 29887102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 30118592 - 30118743
Alignment:
Q  579 gtgtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaata 678  Q
    ||||| || ||||||||||| | |||||   ||||||| |  || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  30118592 gtgtatgtgtacatatttggttgaattcccaggtctttcaattttgttaataatgtgattgccttgtcaacctgatagtttttgcataaagcatccaata 30118691  T
Q  679 aggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatc 730  Q
      ||| | ||||| || | |||||  || || ||||||| ||||||||||||    
T  30118692 tagaactctaagtaattatatcaggtggctgacctctatcatgcatctcatc 30118743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 624 - 730
Target Start/End: Complemental strand, 24730958 - 24730852
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  |||||||||||||| |||||||||||||| |||||||||||||  ||||||||||| || | || ||  ||||| ||||||| |||||    
T  24730958 gttaataatgcaattgccttgtcaacatgatggtttttgcataaagcatccaatatagaattgtaagttattatattaggtggttgacctctatcatgca 24730859  T
Q  724 tctcatc 730  Q
    |||||||    
T  24730858 tctcatc 24730852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 624 - 730
Target Start/End: Original strand, 28926443 - 28926549
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  |||||||||||||| |||||||||||||| |||||||||||||  ||| ||||||| || | |||||  ||||| ||||||| |||||    
T  28926443 gttaataatgcaattgccttgtcaacatgatggtttttgcataaagcatccaatagagaactgtaagtaattatatcaggtggttgacctctatcatgca 28926542  T
Q  724 tctcatc 730  Q
    |||||||    
T  28926543 tctcatc 28926549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 624 - 730
Target Start/End: Complemental strand, 29905742 - 29905636
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||| | ||||| || | |||||  || || ||||||| |||||    
T  29905742 gttaataatgtgattgccttgtcaacctgatagtttttgcataaagcatccaatatagaactctaagtaattatatcaggtggctgacctctatcatgca 29905643  T
Q  724 tctcatc 730  Q
    |||||||    
T  29905642 tctcatc 29905636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 636 - 761
Target Start/End: Original strand, 16702063 - 16702188
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||| ||||||||||| || |||||||  |||||||||||||||||||| ||||  | |||||||||||||| | |||||| ||| | ||    
T  16702063 attgccttgtcaacatgatggtttttacataaagcatgtaataaggaattgtaagtgattacattgggaggttggcctctatcacgcatctgatcaagaa 16702162  T
Q  736 gatcccaagcatcagagattctccca 761  Q
    | | |||||||| ||| | |||||||    
T  16702163 gcttccaagcatgagaaagtctccca 16702188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 621 - 729
Target Start/End: Original strand, 30126948 - 30127056
Alignment:
Q  621 ttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattat 720  Q
    |||||||| ||||  ||||| ||||||||||||||||||||||| |||||||||||||  ||||||||| | || | |||||  ||||| ||||||| ||    
T  30126948 ttcgttaacaatgcaattgctttgtcaacctgatggtttttgcataaagcatccaatatagaattgtaaataattatatcaggtggttgacctctatcat 30127047  T
Q  721 gcatctcat 729  Q
    |||||||||    
T  30127048 gcatctcat 30127056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 612 - 691
Target Start/End: Original strand, 29366305 - 29366384
Alignment:
Q  612 tctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    ||||| ||||||||||| || |  ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  29366305 tctttcatcttcgttaacaacgcaattgccttgtcaacctgatggtttttgcataaagcatccaatatagaattgtaagt 29366384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 611 - 730
Target Start/End: Complemental strand, 29898193 - 29898074
Alignment:
Q  611 gtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttgg 710  Q
    |||||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| |||||  ||| |||| || || | || ||  |||||     
T  29898193 gtctttaatctttgttaacaacgtgattgccttgtcaacctgatggtttttgcataaagcattcaatatagaactgtacgtaattatattaggtggttga 29898094  T
Q  711 cctctattatgcatctcatc 730  Q
    ||||||| ||||||||||||    
T  29898093 cctctatcatgcatctcatc 29898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 624 - 730
Target Start/End: Complemental strand, 29073866 - 29073760
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||  ||| ||||||| || | |||||  |||   ||||||| |||||    
T  29073866 gttaataatgcaattgccttgtcaacctgatggtttttgcataaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgca 29073767  T
Q  724 tctcatc 730  Q
    |||||||    
T  29073766 tctcatc 29073760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 624 - 730
Target Start/End: Complemental strand, 29078630 - 29078524
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||  ||| ||||||| || | |||||  |||   ||||||| |||||    
T  29078630 gttaataatgcaattgccttgtcaacctgatggtttttgcataaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgca 29078531  T
Q  724 tctcatc 730  Q
    |||||||    
T  29078530 tctcatc 29078524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 624 - 730
Target Start/End: Complemental strand, 29106439 - 29106333
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||  ||| ||||||| || | |||||  |||   ||||||| |||||    
T  29106439 gttaataatgcaattgccttgtcaacctgatggtttttgcataaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgca 29106340  T
Q  724 tctcatc 730  Q
    |||||||    
T  29106339 tctcatc 29106333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 624 - 901
Target Start/End: Original strand, 30060058 - 30060335
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||  ||||  ||||||||||| || | |||||   |||| ||||||| || ||    
T  30060058 gttaataatgcaattgccttgtcaacctgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattca 30060157  T
Q  724 tctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttat 823  Q
    ||||||| |  || |   |||||| ||||||| ||||   |||    | |||||| ||||| |||||||||||||| | |||||||   ||||||||       
T  30060158 tctcatcgactagctttaaagcataagagattttccccgatttacagataccatcaataagggaattgtatgttaccacatcaggaataatgtttttgca 30060257  T
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagct 901  Q
    ||||| |||||  | |||||| | ||||| ||| ||| ||||| ||||||| || ||||| ||||| | |||||||||    
T  30060258 atgcatttcttcaaagagattcatggcttcatcgacctttttaatcttacaaaacccattaatcattatattgtagct 30060335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 590 - 694
Target Start/End: Original strand, 15714854 - 15714958
Alignment:
Q  590 catatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaa 689  Q
    ||||||||| | ||||| |||||||||||||||| | |  || |  |||||||||||||| ||||| |||||||| ||||||| |||||||||||||||     
T  15714854 catatttggttcaattccttggtctttgatcttcttgaccaaagcaattgccttgtcaacgtgatgatttttgcataaagcatgcaataaggaattgtat 15714953  T
Q  690 gtgat 694  Q
    |||||    
T  15714954 gtgat 15714958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 626 - 730
Target Start/End: Original strand, 30061893 - 30061997
Alignment:
Q  626 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatc 725  Q
    |||||||||||||||||||||||  ||||||  |||||| |||||||||||||  ||||||||||| || | || ||  ||||| ||||||| |||||||    
T  30061893 taataatgtgattgccttgtcaagatgatggcgtttgcataaagcatccaatatagaattgtaagtaattatattaggtggttgacctctatcatgcatc 30061992  T
Q  726 tcatc 730  Q
    |||||    
T  30061993 tcatc 30061997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 849 - 955
Target Start/End: Complemental strand, 24885017 - 24884912
Alignment:
Q  849 gcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcctcttttagcaatagtgttaaatacat 948  Q
    |||| ||||||||||||||||||||||||| | || ||  ||| ||||||||| ||||||| ||||  |||||| |||  |||||||||||| |||||||    
T  24885017 gcttcatccaccattttattcttacataattcgttaatg-tgatattgtagctttgaacataaggaatcactccacttcgagcaatagtgttgaatacat 24884919  T
Q  949 atgtggc 955  Q
    |||||||    
T  24884918 atgtggc 24884912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 365 - 459
Target Start/End: Complemental strand, 24942541 - 24942447
Alignment:
Q  365 ataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttaca 459  Q
    ||||||| || ||||||||||  ||  || |||||||||||||||||||||| ||||| |||||||| ||| |||||||||||| ||| ||||||    
T  24942541 ataagagcttcaaaagttacatgattaggggtgcaaccattgtcttccatttttgacactaaggacaatgcttcatcaaacaagccctttttaca 24942447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 624 - 922
Target Start/End: Complemental strand, 29882538 - 29882240
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  ||||| |||||||| ||||| |||||||| |||||||||||||  |||||||| || || | |||||   |||| |||| || |||||    
T  29882538 gttaataatgcaattgctttgtcaacatgatgttttttgcataaagcatccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgca 29882439  T
Q  724 tctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttat 823  Q
    ||||||| | ||| ||| ||||||  || ||||| |||  ||||   |  ||||||||||| | | | || ||||  | |||||||   || | |||       
T  29882438 tctcatcgacaagttccaaagcatatgatattcttccagatttgcacaatccatcgataagggcactataagttatcacatcaggaaaaatttgtttgtg 29882339  T
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
    ||||| ||||||||  || || | ||||| ||||||||||||| ||||||| |||||||| ||||||| | ||||||| |||||||||| || ||||||    
T  29882338 atgcatttctttgaaaagtttcatggcttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctctgaacattagcagtcactcc 29882240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 624 - 922
Target Start/End: Complemental strand, 29909694 - 29909396
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  ||||| |||||||| ||||| |||||||| |||||||||||||  |||||||| || || | |||||   |||| |||| || |||||    
T  29909694 gttaataatgcaattgctttgtcaacatgatgttttttgcataaagcatccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgca 29909595  T
Q  724 tctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttat 823  Q
    ||||||| | ||| ||| ||||||  || ||||| |||  ||||   |  ||||||||||| | | | || ||||  | |||||||   || | |||       
T  29909594 tctcatcgacaagttccaaagcatatgatattcttccagatttgcacaatccatcgataagggcactataagttatcacatcaggaaaaatttgtttgtg 29909495  T
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
    ||||| ||||||||  || || | ||||| ||||||||||||| ||||||| |||||||| ||||||| | ||||||| |||||||||| || ||||||    
T  29909494 atgcatttctttgaaaagtttcatggcttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctctgaacattagcagtcactcc 29909396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 578 - 730
Target Start/End: Original strand, 29357829 - 29357981
Alignment:
Q  578 agtgtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaat 677  Q
    |||||| || ||||||||||| | ||| |  |||| ||| ||||  |||||||| |  ||||| ||||||||||||||||||||||| ||||||||||||    
T  29357829 agtgtatgtgtacatatttggttgaataccctggtttttcatctgtgttaataacgcaattgcattgtcaacctgatggtttttgcataaagcatccaat 29357928  T
Q  678 aaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatc 730  Q
    |  ||| ||||||| |  | || ||  ||||| ||||||| ||||||||||||    
T  29357929 atagaactgtaagtaactatattaggtggttgacctctatcatgcatctcatc 29357981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 636 - 747
Target Start/End: Original strand, 24271855 - 24271966
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    ||||||||||||||||||||||||||||| ||| |||||||||  ||| |||| ||||| | |||||   |||| |||| || ||||||||||||  |||    
T  24271855 attgccttgtcaacctgatggtttttgcataaatcatccaatatagaactgtacgtgattatatcaggttgttgccctcgatcatgcatctcatcgttaa 24271954  T
Q  736 gatcccaagcat 747  Q
    | ||| ||||||    
T  24271955 gttccaaagcat 24271966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 624 - 691
Target Start/End: Original strand, 24890142 - 24890209
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    ||||||||||  |||||||||||||| |||||||||||||| |||||||||||||  ||| |||||||    
T  24890142 gttaataatgcaattgccttgtcaacatgatggtttttgcataaagcatccaatatagaactgtaagt 24890209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 636 - 691
Target Start/End: Complemental strand, 29835306 - 29835251
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||    
T  29835306 attgccttgtcaacctgatggtttttgcataaagcatccaatatagaactgtaagt 29835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 636 - 691
Target Start/End: Complemental strand, 29866740 - 29866685
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||    
T  29866740 attgccttgtcaacctgatggtttttgcataaagcatccaatatagaactgtaagt 29866685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 636 - 691
Target Start/End: Complemental strand, 29894644 - 29894589
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||    
T  29894644 attgccttgtcaacctgatggtttttgcataaagcatccaatatagaactgtaagt 29894589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 6841890 - 6842008
Alignment:
Q  30 aaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttcccc 129  Q
    |||||||||||||||||  |||||| |||| ||  || || |||||  ||||||| | || ||| || ||||| ||||||||||| |||||||||  |||    
T  6841890 aaaagatatagtgtggatggaccataataaaatatatgttactctttaatctaatggccataatatactttcctatggtgggaaattctttccctcaccc 6841989  T
Q  130 atccgaaatgccaccttgt 148  Q
    |||| ||||||||||||||    
T  6841990 atcctaaatgccaccttgt 6842008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 609 - 691
Target Start/End: Complemental strand, 29929391 - 29929309
Alignment:
Q  609 tggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    ||||||||||  |||||||| ||||  ||||| ||||||||||||||| ||||||| |||||||| ||||  |||||||||||    
T  29929391 tggtctttgaatttcgttaacaatgcaattgctttgtcaacctgatgggttttgcataaagcatctaatatagaattgtaagt 29929309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 15727097 - 15727154
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtga 693  Q
    |||||||||||||| |||||||||||||| |||||||| | ||| |||||||||||||    
T  15727097 attgccttgtcaacgtgatggtttttgcataaagcatctattaacgaattgtaagtga 15727154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 636 - 740
Target Start/End: Complemental strand, 30029229 - 30029125
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||  | ||||||||||||||| || |||| ||||||| |||| |||||||||| ||  | ||| ||||||| |  ||||||||| ||||    
T  30029229 attgccttgtcaagattatggtttttgcacaacgcgtccattaaggaagtgtacgtgatcacattagctgcttgacctctatcacacatctcatcaataa 30029130  T
Q  736 gatcc 740  Q
    |||||    
T  30029129 gatcc 30029125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 468
Target Start/End: Original strand, 15714564 - 15714727
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||||||| ||||||| | | |||||||||||||  |   ||| ||| | |||| ||||||  |||| | |||||||| |||| ||  |||||||||    
T  15714564 atcatttcacgcagaagtttctctgccttatcattctcatcatttttaaagagagcacggataattgtttcataagttacagcatctggaatgcaaccat 15714663  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccatt 468  Q
    |||||||||||| |||||| | || || ||| |||||||| ||| |||||  |||||| |||||    
T  15714664 tgtcttccatttttgacagcagggtcactgcttcatcaaataagccctctaaacaaagaccatt 15714727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 625 - 747
Target Start/End: Original strand, 24263649 - 24263771
Alignment:
Q  625 ttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcat 724  Q
    |||||||||  ||||||||||||||| ||||||||||||| || ||||||||||  ||| |||| ||||| | |||||   |||| |||| || ||||||    
T  24263649 ttaataatgcaattgccttgtcaaccagatggtttttgcataaggcatccaatatagaactgtacgtgattatatcaggttgttgccctcgatcatgcat 24263748  T
Q  725 ctcatctataagatcccaagcat 747  Q
    |  ||| ||||| ||| ||||||    
T  24263749 caaatcgataagttccaaagcat 24263771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 624 - 730
Target Start/End: Original strand, 29211289 - 29211395
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  | ||||||||||||| ||||| ||||||| |||||||||||||  ||| ||||||| |  | || ||  ||||| ||||||| |||||    
T  29211289 gttaataatgcaactgccttgtcaacccgatgggttttgcataaagcatccaatatagaactgtaagtaactatattaggtggttgacctctatcatgca 29211388  T
Q  724 tctcatc 730  Q
    |||||||    
T  29211389 tctcatc 29211395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 824 - 912
Target Start/End: Original strand, 24272043 - 24272131
Alignment:
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattag 912  Q
    ||||| ||||||||  || || | ||||||||||||||||||| ||||||| |||| ||| ||||||| | |||||||  |||||||||    
T  24272043 atgcatttctttgaaaagtttcatggcttgatccaccattttaatcttacaaaatctattaatcatgatactgtagctccgaacattag 24272131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 839 - 890
Target Start/End: Complemental strand, 24730743 - 24730692
Alignment:
Q  839 gagattgacggcttgatccaccattttattcttacataatccatttatcatg 890  Q
    |||||| || |||| ||||||||||||| |||||||||||||||| ||||||    
T  24730743 gagatttacagcttcatccaccattttaatcttacataatccattaatcatg 24730692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 642 - 693
Target Start/End: Complemental strand, 29889815 - 29889764
Alignment:
Q  642 ttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtga 693  Q
    ||||||||||||||| ||||||| |||||||| ||||  |||||||||||||    
T  29889815 ttgtcaacctgatgggttttgcataaagcatctaatatagaattgtaagtga 29889764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 996 - 1074
Target Start/End: Complemental strand, 4303113 - 4303035
Alignment:
Q  996 tacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctctccctaccaa 1074  Q
    ||||||| | |||||| | |||| ||||||||  || | ||||||||||| || |||||||||||||||||||| ||||    
T  4303113 tacaatagattcccaagaaattctagagtcttggttctctcccctccaagaattcgagagcttggtctctcccttccaa 4303035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 824 - 922
Target Start/End: Original strand, 24263848 - 24263946
Alignment:
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
    ||||| ||||||||  || || | ||||||||||||||||||| ||||||| |||||||| ||||  | |||||||||  ||||| ||| || ||||||    
T  24263848 atgcatttctttgaaaagtttcatggcttgatccaccattttaatcttacaaaatccattaatcacaatattgtagctccgaacagtagcagtcactcc 24263946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 621 - 691
Target Start/End: Complemental strand, 29099449 - 29099379
Alignment:
Q  621 ttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    |||||||| ||||  ||||| |||||||| |||||| ||||||| |||||||| ||||  |||||||||||    
T  29099449 ttcgttaacaatgcaattgctttgtcaacttgatgggttttgcataaagcatctaatatagaattgtaagt 29099379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 621 - 691
Target Start/End: Complemental strand, 29116367 - 29116297
Alignment:
Q  621 ttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 691  Q
    |||||||| ||||  ||||| |||||||| |||||| ||||||| |||||||| ||||  |||||||||||    
T  29116367 ttcgttaacaatgcaattgctttgtcaacttgatggattttgcataaagcatctaatatagaattgtaagt 29116297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 848 - 922
Target Start/End: Complemental strand, 29929152 - 29929078
Alignment:
Q  848 ggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
    ||||| ||||||||||||| ||||||| |||||||| ||||||| | ||||||| | | |||||| || ||||||    
T  29929152 ggcttcatccaccattttaatcttacaaaatccattaatcatgatactgtagctcttagcattagcagtcactcc 29929078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 10359720 - 10359679
Alignment:
Q  104 atggtgggaaaatctttcccttccccatccgaaatgccacct 145  Q
    |||||||||||||||||||||| ||||||  |||||||||||    
T  10359720 atggtgggaaaatctttcccttacccatcataaatgccacct 10359679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 428
Target Start/End: Original strand, 16701793 - 16701850
Alignment:
Q  371 gtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaagg 428  Q
    |||||| ||||||||||||| ||  |||| |||||||||||||||| |||||| ||||    
T  16701793 gtttgataagttacaacatcaggtatgcatccattgtcttccatttttgacagcaagg 16701850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 824 - 901
Target Start/End: Original strand, 16702242 - 16702319
Alignment:
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagct 901  Q
    ||||| |||| ||| |||||| | ||||| ||| ||||||||| |||||||||||||||| || | || |||||||||    
T  16702242 atgcatttctgtgaagagattcaaggcttcatcaaccattttaatcttacataatccattaataaggatattgtagct 16702319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 645 - 730
Target Start/End: Complemental strand, 29876907 - 29876822
Alignment:
Q  645 tcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatc 730  Q
    ||||| |||||  ||||||| ||||||| |||||  ||||||||||| || | || ||  ||||||||||||| ||||||||||||    
T  29876907 tcaacatgatgaattttgcataaagcatacaatatagaattgtaagtaattatattaggtggttggcctctatcatgcatctcatc 29876822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 30029683 - 30029618
Alignment:
Q  397 gcaaccattgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaag 462  Q
    ||||||||| |||||||||| ||| || |||| || | | |||||||||||| |||||||||||||    
T  30029683 gcaaccattctcttccatttttgaaagcaaggtcaatacttcatcaaacaagccctctttacaaag 30029618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 344; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 305 - 955
Target Start/End: Original strand, 44262165 - 44262820
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||||||| ||||||| ||| | |||||||||||||    |||||||||||||| | ||||||||||   |||||||| |||  || |||||||  |    
T  44262165 atcatttcacgaagaagtttcaccgtcttatcattcttgccattttcaaacaaagcacgaataagagtttcgtaagttacagcattaggggtgcaactgt 44262264  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgata 504  Q
    |||||||||||| ||||| |||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| | ||||||  |||||||||||||||    
T  44262265 tgtcttccatttttgacactaaggacaatgcgtcatcaaacaagccctctttacaaagcccattgaccatcacactgtacattttaacatctaaatgata 44262364  T
Q  505 gaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatatttggc 599  Q
    | |||||| |||||||  |||||||||| ||||||||||||||| ||||||| |||||| |||||| |||||||||     |||||||||||||||||||    
T  44262365 gcccttaataagaagattctgataaaccacttgtgcatccttaagtcttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggc 44262464  T
Q  600 ttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacat 699  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44262465 tgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgataacat 44262564  T
Q  700 cagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttac 799  Q
    ||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||   ||||  ||| ||||| |||||||||||||||||||     
T  44262565 cagcaggttggcctatattatgcatctcatctataagatcccaaacatcagatattcttcctgatttgcaaagtccatcaataagtgaattgtatgttat 44262664  T
Q  800 aatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtag 899  Q
    | |||| ||||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||| |||||||| |||||||| ||||| ||| |||||    
T  44262665 agtatcgggagccatgttttttatttgcagttctttgaagagattgacggcttcatccaccatttttttcttacacaatccattaatcataacactgtag 44262764  T
Q  900 ctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtggc 955  Q
    || |||||| |||||  |||||| |||  |||||||||||| ||||||||||||||    
T  44262765 ctttgaacactaggaatcactccacttcgagcaatagtgttgaatacatatgtggc 44262820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 7e-77
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 11962243 - 11962017
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  || |||||||||||||||||||| | |||||||||||||  || | |||||||||||| | ||||||    
T  11962243 tgataggaactgatatcaaaatataaactaatagttagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtgttcgagag 11962144  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    |||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  11962143 cttggtctatccctaccaatcctttaccccaatgcctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacatagaa 11962044  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
     ||||||||||| ||||||||||||||    
T  11962043 atttagtagacagcaattactacacac 11962017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1041 - 1126
Target Start/End: Original strand, 45638746 - 45638831
Alignment:
Q  1041 ccaagtatccgagagcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttata 1126  Q
    ||||| || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45638746 ccaagaattcgagagcttggtctctccctacctaccctttatcccaatccctgaatgcctttcttttcctctgcatcttatttata 45638831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 956 - 1127
Target Start/End: Complemental strand, 3567179 - 3567008
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    |||||| || ||| |||||||||||| ||||  |||| ||||||||| |||| ||| | |||| |  |||||  || | ||||||||||| || ||| ||    
T  3567179 tgatagaaactgagatcaaaatataacctaatagtaatattacaatacaatctcaagaaattcaattgtcttggttctctcccctccaagaattcgatag 3567080  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatg-cctttcttttcctctacatc-ttatttataa 1127  Q
     |||||||||||||||| ||||||||| |||||||  ||||| || |||||||||||| |||| ||||||||||    
T  3567079 tttggtctctccctacctatcctttattccaatcc--gaatgccccttcttttcctctgcatctttatttataa 3567008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 231991 - 232067
Alignment:
Q  38 tagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaa 114  Q
    |||||||||||||| || ||||||||||| |||||| | |||||||| || ||||| || |||||||||||||||||    
T  231991 tagtgtggagagactatgataagatcaatgttcctcatttatctaatggttaaaatttactttcccatggtgggaaa 232067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 49708659 - 49708774
Alignment:
Q  30 aaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttcccc 129  Q
    |||||||||||||||||  || ||| |||| ||| || ||||||||  ||||||| | || |||||| ||| ||||||||||||| |||||||||  |||    
T  49708659 aaaagatatagtgtggatggatcataataaaatctatgttcctctttaatctaatgggcataatctacttttccatggtgggaaattctttccctcaccc 49708758  T
Q  130 atccgaaatgccacct 145  Q
    | || |||||||||||    
T  49708759 accctaaatgccacct 49708774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 32449432 - 32449347
Alignment:
Q  29 gaaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaa 114  Q
    ||||| |||||||||||| ||||||| |||| ||   ||||||||||  |||||||||||||||  |||||| |||||||||||||    
T  32449432 gaaaaaatatagtgtggatagaccatgataaaattggtattcctctttaatctaattgtcaaaaaatatttttccatggtgggaaa 32449347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 19129630 - 19129556
Alignment:
Q  39 agtgtggagagaccatcataagatcaatattcctcttatatctaattg-tcaaaatctattttcccatggtggga 112  Q
    |||||| |||||| |||||||||||||| ||||||||| ||| ||| | |||||| | | |||||||||||||||    
T  19129630 agtgtgaagagactatcataagatcaatgttcctcttaaatcaaatggttcaaaaacaactttcccatggtggga 19129556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 245 - 955
Target Start/End: Original strand, 43384 - 44096
Alignment:
Q  245 aaattgcaactagaaaacatctcaccttgttttactctt-acagtagaccgctatatagcgatcatttcacgtagaagttccacagccttatcattcttg 343  Q
    |||||| || |||||||||||| |||| ||||||||||| | |||||||| |||    || ||||||||||| |  |||| ||| |||||||||||  ||    
T  43384 aaattgtaagtagaaaacatcttacctagttttactctttagagtagacctcta----gcaatcatttcacgaatcagtttcaccgccttatcatttctg 43479  T
Q  344 ttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaa 443  Q
    ||| |||||||||||||| | |||| | ||| | |||||||| |||| || |||||||| ||||||||||||| ||| |||||||||| ||| |||||||    
T  43480 ttgttttcaaacaaagcacgaataataatttcataagttacaccatcaggagtgcaaccgttgtcttccatttttgagagtaaggacaatgcttcatcaa 43579  T
Q  444 acaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgatagaccttaacaagaagaacctgataaaccgcttgtgcatc 543  Q
    | ||  | ||||||||||||||||||| ||||||| |||| ||   | ||||||||||||||   |||   |||||||||||||||||| ||||||||||    
T  43580 aaaacccttctttacaaagcccattaatcatcacagtatatatcctagcatctaaatgataggtgttattcagaagaacctgataaacctcttgtgcatc 43679  T
Q  544 cttaaatcttccacttttgcgtagtccatcaaca-----agtgtaagtatacatatttggcttaattcattggtctttgatcttcgttaataatgtgatt 638  Q
    | ||| | ||||| ||||||  ||||||||||||     |||||| ||||| |||| | ||| ||||| |||||  |||||||||||||| || ||||||    
T  43680 cctaagttttccatttttgcacagtccatcaacaagtatagtgtatgtatagatatctagctgaattccttggttcttgatcttcgttaacaaagtgatt 43779  T
Q  639 gccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagat 738  Q
    |||||||||||||||||||||||||||||  |||| ||||| ||| |||||||||| |  |  |  ||||| ||||||| ||||||||||||||||| ||    
T  43780 gccttgtcaacctgatggtttttgcacaatccatctaataaagaactgtaagtgataatgttcgctggttgacctctatcatgcatctcatctataaaat 43879  T
Q  739 cccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttatatgcaattctttgag 838  Q
    ||||||||||||| ||||||||   ||||  ||| ||||| || |  ||||||||||||||| | | |||| |||| |||||   ||||| ||||||||     
T  43880 cccaagcatcagacattctccctaatttgcaaagtccatcaattaaggaattgtatgttacagtgttaggaaccatatttttggaatgcatttctttgaa 43979  T
Q  839 gagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcctcttttagcaatagtg 938  Q
    |||||| || |||| |||||||||||||||||| || ||||| || ||||| ||| ||||||| ||||||| | |||||||||| ||| |||||||||||    
T  43980 gagattaactgcttcatccaccattttattcttgcaaaatccgttaatcataacactgtagctctgaacatcaagagccactccccttctagcaatagtg 44079  T
Q  939 ttaaatacatatgtggc 955  Q
    || ||||||||||||||    
T  44080 ttgaatacatatgtggc 44096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 8e-89; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 22950476 - 22950250
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  22950476 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 22950377  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  22950376 cttggtctctccctaccaatcctttatcccaatccctgaatacctttattttcctctgcatcttatttataatactaagtcctatagctgttacatagaa 22950277  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  22950276 gtttagtagacagcaattactacacac 22950250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 19934769 - 19934543
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||| ||||||||  || | |||||||||||||| ||||||    
T  19934769 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcaagagtcttggttctctcccctccaagtattcgagag 19934670  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19934669 cttggtctctccctaccaatcctttatcccaatccctaaatgcctttcttttcctctgcatcttatttataatactaagtcttatagttgttacatagaa 19934570  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||  ||||||||||||||    
T  19934569 gtttagtagacggcaattactacacac 19934543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 956 - 1182
Target Start/End: Original strand, 29526038 - 29526265
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | || ||||||||||  || | ||||||||||| || ||||||    
T  29526038 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaatccgagagtcttggttctctcccctccaagaattcgagag 29526137  T
Q  1056 cttggtctctccctaccaatccttta-tcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacataga 1154  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  29526138 cttggtctctccctaccaatcctttaatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacataga 29526237  T
Q  1155 agtttagtagacaacaattactacacac 1182  Q
    ||||||||||||| ||||||||||||||    
T  29526238 agtttagtagacagcaattactacacac 29526265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 956 - 1181
Target Start/End: Original strand, 39701588 - 39701817
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  39701588 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 39701687  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtct----tatagctgttacat 1151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    |||||| |||||||    
T  39701688 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctgcatcttatttataatactaactctctcctatagcagttacat 39701787  T
Q  1152 agaagtttagtagacaacaattactacaca 1181  Q
    |||||||||||||||| |||||||| ||||    
T  39701788 agaagtttagtagacagcaattactgcaca 39701817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 956 - 1182
Target Start/End: Original strand, 29527251 - 29527478
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccc-tccaagtatccgaga 1054  Q
    |||||||||  ||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | ||||| |||||| || | |||    
T  29527251 tgataggaacagatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctccccctccaagaattcaaga 29527350  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacataga 1154  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  29527351 gcttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttaaaatactaagtccaatagctgttacataga 29527450  T
Q  1155 agtttagtagacaacaattactacacac 1182  Q
    ||||||||||||| ||||||||||||||    
T  29527451 agtttagtagacagcaattactacacac 29527478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 956 - 1181
Target Start/End: Original strand, 39702818 - 39703047
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  39702818 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 39702917  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtct----tatagctgttacat 1151  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||||||| || |||    |||||| |||||||    
T  39702918 cttggtctctccctaccgatcctttatcccaatccctgaatgcctttcttttcctttgcaacttatttataatacaaactctctcctatagcagttacat 39703017  T
Q  1152 agaagtttagtagacaacaattactacaca 1181  Q
    |||||||||||||||| ||| |||| ||||    
T  39703018 agaagtttagtagacagcaaatactgcaca 39703047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 997 - 1165
Target Start/End: Original strand, 41050968 - 41051141
Alignment:
Q  997 acaatataatcccaaaatattc-gagagtcttaattttttcccctccaagtatccgagagcttggtctctccctaccaatcctttatcccaatccctgaa 1095  Q
    |||||| |||||||| | |||| |||||||||  || | ||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||||||    
T  41050968 acaatagaatcccaagaaattccgagagtcttggttctgtcccctccaagaattcaagagcttggtctctccctacctatcctttatcccaatccctgaa 41051067  T
Q  1096 tgcctttcttttcctctacatcttatttataatactaagtct----tatagctgttacatagaagtttagtaga 1165  Q
    |  || ||||||||||| |||||||||||||||||||| |||    |||| | |||||||||||||||||||||    
T  41051068 tatctgtcttttcctctgcatcttatttataatactaactctctcctatatcagttacatagaagtttagtaga 41051141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 955 - 1066
Target Start/End: Complemental strand, 19139485 - 19139374
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    ||||||| || |||||||||||| ||||||||  ||||||||||||||||||||||| | |||||||||||||  || | ||||||||||| ||  ||||    
T  19139485 ctgatagaaactgatatcaaaatttaaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagaattagaga 19139386  T
Q  1055 gcttggtctctc 1066  Q
    ||||||| ||||    
T  19139385 gcttggtttctc 19139374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 854 - 956
Target Start/End: Complemental strand, 20888608 - 20888506
Alignment:
Q  854 atccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtg 953  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||| |||||||  || |||||| |||  | | ||| |||| ||||||||||||    
T  20888608 atccaccattttattcttatataatacgttaatcatgacattgtagctatcaacattataagtcactccccttcaaaccatattgttgaatacatatgtg 20888509  T
Q  954 gct 956  Q
    |||    
T  20888508 gct 20888506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 326202 - 326295
Alignment:
Q  17 agaagaaagtgggaaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgg 110  Q
    ||||||||||||||||| || |||||||   ||||||| ||||||||||| ||| ||||| || |||| |||||||  || ||| |||||||||    
T  326202 agaagaaagtgggaaaaaatgtagtgtgacaagaccatgataagatcaatgttcatcttaaatttaatggtcaaaacttacttttccatggtgg 326295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 19854450 - 19854336
Alignment:
Q  30 aaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttcccc 129  Q
    |||||||||||||||||  |||||| |||| ||  || || |||||  ||||||| | || ||| || ||||| ||||||||||| |||||||||  |||    
T  19854450 aaaagatatagtgtggatggaccataataaaatacatgttactctttaatctaatggccataatatactttcctatggtgggaaattctttccctcaccc 19854351  T
Q  130 atccgaaatgccacc 144  Q
    || | ||||||||||    
T  19854350 attctaaatgccacc 19854336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 8e-89; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 404 - 945
Target Start/End: Complemental strand, 24227148 - 24226602
Alignment:
Q  404 ttgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgat 503  Q
    ||||||||||||| ||| |||||||||| ||| ||||| || ||  | ||||||||||||||||||| ||||||| |||| ||   | ||||||| ||||    
T  24227148 ttgtcttccatttttgagagtaaggacaatgcttcatccaaaaacccttctttacaaagcccattaatcatcacagtatatatcctagcatctaactgat 24227049  T
Q  504 agaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatatttgg 598  Q
    || | |||   |||||| ||||||||||| ||||||||||| ||| ||||||| ||||||  |||||||||||||||     ||| ||||| ||||||||    
T  24227048 agcctttattcagaagatcctgataaacctcttgtgcatccctaagtcttccatttttgcacagtccatcaacaagtatagtgtatgtatagatatttgg 24226949  T
Q  599 cttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcaca 698  Q
    |  ||||| ||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||| |||||||||||||| |      
T  24226948 ccgaattccttgattcttgatcttcgttaacaatgtgattgccttgtcaacctgatggtttttgcacaatccatctaataaagaattgtaagtgattatg 24226849  T
Q  699 tcagtaggttggcctctattatgcatctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgtta 798  Q
    | ||  ||||| ||||||| |||||||||| |||| | ||||||| ||||| | |||||||    ||||  ||| ||||| || || |||||||||| ||    
T  24226848 ttagctggttgacctctatcatgcatctcacctatgaaatcccaaacatcatatattctccttgatttgcaaagtccatcaattagggaattgtatgcta 24226749  T
Q  799 caatatcaggagccatgttttttatatgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgta 898  Q
    || | |||||| |||| |||||   ||||| ||||||||  |||||  |||||| |||||||||||||||||||||||||||||| |||||||| |||||    
T  24226748 cagtgtcaggaaccatatttttggaatgcatttctttgaaaagatttgcggcttcatccaccattttattcttacataatccattaatcatgactttgta 24226649  T
Q  899 gctatgaacattaggagccactcctcttttagcaatagtgttaaata 945  Q
    |||| |||||||||||| || ||| |||  || ||||||||| ||||    
T  24226648 gctacgaacattaggagtcattccccttagagaaatagtgttgaata 24226602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 955 - 1181
Target Start/End: Complemental strand, 54994823 - 54994597
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | ||||||||||| || |||||    
T  54994823 ctgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagaattcgaga 54994724  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacataga 1154  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  54994723 gcttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagcagttacataga 54994624  T
Q  1155 agtttagtagacaacaattactacaca 1181  Q
    ||||||||||||| |||||||||||||    
T  54994623 agtttagtagacagcaattactacaca 54994597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 1e-75
Query Start/End: Original strand, 956 - 1181
Target Start/End: Complemental strand, 7197929 - 7197700
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  7197929 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 7197830  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtct----tatagctgttacat 1151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    | |||| |||||||    
T  7197829 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctgcatcttatttataatactaactctctcctgtagcagttacat 7197730  T
Q  1152 agaagtttagtagacaacaattactacaca 1181  Q
    |||||||| ||||||| |||||||| ||||    
T  7197729 agaagttttgtagacagcaattactgcaca 7197700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 955 - 1167
Target Start/End: Original strand, 48637537 - 48637753
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | ||| |||||||||  || | |||||||||||||| |||||    
T  48637537 ctgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaatttgagagtcttggttctctcccctccaagtattcgaga 48637636  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatacta----agtcttatagctgttaca 1150  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||    | || |||||| ||||||    
T  48637637 gcttggtctctccctaccaatcctttatcccaatccctcaatacctctcttttcctctgcatcttatttataatactaactcactcctatagcagttaca 48637736  T
Q  1151 tagaagtttagtagaca 1167  Q
    ||  |||||||||||||    
T  48637737 tattagtttagtagaca 48637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 994 - 1176
Target Start/End: Original strand, 2386338 - 2386520
Alignment:
Q  994 attacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctctccctaccaatcctttatcccaatccctg 1093  Q
    |||||||||||||||||| | ||||||||||||   || | ||||||||||| || ||||||||||||||||||||||| |||||||||| |||||||||    
T  2386338 attacaatataatcccaagaaattcgagagtctcggttctctcccctccaagaattcgagagcttggtctctccctacctatcctttatctcaatccctg 2386437  T
Q  1094 aatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaagtttagtagacaacaattact 1176  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| | |||||||| |||||||||||||| ||||||||    
T  2386438 aatgcctttcttttcctctgcatcttatttataatactaagtcctataacagttacataaaagtttagtagacagcaattact 2386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 956 - 1133
Target Start/End: Original strand, 45826152 - 45826329
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  |||| |||||||||||||||||| | ||| |||||||||  || | ||||||||||| || ||||||    
T  45826152 tgataggaactgatatcaaaatataaactaatagtaatattacaatataatcccaagaaattagagagtcttggttctctcccctccaagaattcgagag 45826251  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaa 1133  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  45826252 cttggtctctccctacctatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaa 45826329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 959 - 1167
Target Start/End: Complemental strand, 592711 - 592499
Alignment:
Q  959 taggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagctt 1058  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||| | ||||||| |||||  || | ||||||||||| || |||||||||    
T  592711 taggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagggtcttggttctctcccctccaagaattcgagagctt 592612  T
Q  1059 ggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatacta----agtcttatagctgttacataga 1154  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||    | || |||||| ||||||||      
T  592611 gggctctccctaccaatcctttatcccaatccctgaatacctttcttttcctttgcatcttatttataatactaactcactcctatagcagttacatatt 592512  T
Q  1155 agtttagtagaca 1167  Q
    |||||||||||||    
T  592511 agtttagtagaca 592499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 5e-47
Query Start/End: Original strand, 956 - 1164
Target Start/End: Complemental strand, 40977002 - 40976783
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||  || | ||||||||||| || ||||||    
T  40977002 tgataggaactgatatcaaaatataaactaatagtaatattacaatataatcccaaaaaattcgagagtcttggttctctcccctccaagaattcgagag 40976903  T
Q  1056 cttggtctc-------tccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaa----gtcttatagct 1144  Q
    |||||||||       ||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||     || ||||||     
T  40976902 cttggtctctccatagtccataccagtcctttatcccaatccctgcatgcctttcttttcctctgcatcttatttataagactaattccctcctatagca 40976803  T
Q  1145 gttacatagaagtttagtag 1164  Q
    ||||||| ||||||||||||    
T  40976802 gttacattgaagtttagtag 40976783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 989 - 1119
Target Start/End: Complemental strand, 51274566 - 51274436
Alignment:
Q  989 gtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctctccctaccaatcctttatcccaat 1088  Q
    |||| |||||||||||||||||| | |||||||||||||  || |  |||||||||| ||  |||||||||||||||||||||| |||||||||||||||    
T  51274566 gtaatattacaatataatcccaagaaattcgagagtcttggttctcccccctccaagaatttgagagcttggtctctccctacctatcctttatcccaat 51274467  T
Q  1089 ccctgaatgcctttcttttcctctacatctt 1119  Q
    ||||||||||| |||||||||||| ||||||    
T  51274466 ccctgaatgcccttcttttcctctgcatctt 51274436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 636 - 945
Target Start/End: Original strand, 24219143 - 24219452
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| || | || ||  ||||| ||||||| |||||||||  | ||||    
T  24219143 attgccttgtcaacatgatggtttttgcataaagcatccaataaagaattgtaagtaattatattaggtggttgacctctatcatgcatctctccgataa 24219242  T
Q  736 gatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttatatgcaattcttt 835  Q
    | | | ||||||  |||||||| ||   ||||   | |||||| ||||| |||||||| || || | ||| |||   || | |||   ||||| |||||     
T  24219243 gtttcaaagcatatgagattcttcccgatttgcacaaaccatcaataagggaattgtacgtcaccacatcgggaaaaatttgtttgcaatgcatttcttc 24219342  T
Q  836 gaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcctcttttagcaata 935  Q
     | ||| || | ||||| ||||||||||||| ||||||| |||||| | ||||||| | |||| |||||||| | ||||||||||||  ||| ||| |||    
T  24219343 aaagagtttcatggcttcatccaccattttaatcttacaaaatccactaatcatgatactgtaactatgaacgtcaggagccactccaatttgagccata 24219442  T
Q  936 gtgttaaata 945  Q
    ||||| ||||    
T  24219443 gtgttgaata 24219452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 32355992 - 32355863
Alignment:
Q  17 agaagaaagtgggaaaaga-tatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaa 115  Q
    |||||||||||| |||| | | ||||||| |||||| |||||||||||||| ||| ||||| ||||||| ||||||| ||| ||||| ||||||| ||||    
T  32355992 agaagaaagtggaaaaaaaatctagtgtgaagagactatcataagatcaatgttcatcttaaatctaatggtcaaaacctactttcctatggtggaaaaa 32355893  T
Q  116 tctttcccttccccatccgaaatgccacct 145  Q
    |||||||||| |||| || ||||| |||||    
T  32355892 tctttcccttacccaccctaaatgtcacct 32355863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 362 - 484
Target Start/End: Complemental strand, 11991682 - 11991560
Alignment:
Q  362 tggataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaa 461  Q
    ||||| ||||||| | |||||||| |||| ||  ||  ||||||||| ||||||| |||||  |||| |  ||| |||||||||||| ||||||||||||    
T  11991682 tggatgagagtttcataagttacagcatcaggaatgataccattgtcatccatttttgacaacaaggcctctgcttcatcaaacaagccctctttacaaa 11991583  T
Q  462 gcccattaaccatcacattatac 484  Q
    | ||||| ||||| | |||||||    
T  11991582 gtccattgaccataatattatac 11991560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 55124480 - 55124427
Alignment:
Q  78 atctaattgtcaaaatctattttcccatggtgggaaaatctttcccttccccat 131  Q
    ||||||| ||||| || |||||||||||||||||||| |||||||||| |||||    
T  55124480 atctaatagtcaatatttattttcccatggtgggaaactctttccctttcccat 55124427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 42996333 - 42996373
Alignment:
Q  104 atggtgggaaaatctttcccttccccatccgaaatgccacc 144  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  42996333 atggtgggaaaatctttcccttacccatcctaaatgccacc 42996373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 11267668 - 11267734
Alignment:
Q  78 atctaattgtcaaaatctattttcccatggtgggaaaatctttcccttccccatccgaaatgccacc 144  Q
    ||||||| || ||||| |||||||||||||| ||||| |||||||||  |||| || ||||||||||    
T  11267668 atctaatggttaaaatttattttcccatggtaggaaattctttccctcacccaccctaaatgccacc 11267734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 8e-89; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 956 - 1182
Target Start/End: Original strand, 8089719 - 8089945
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  8089719 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 8089818  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  8089819 cttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcttctgcatcttatttataatactaagtcctatagctgttacatagaa 8089918  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  8089919 gtttagtagacagcaattactacacac 8089945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 10582913 - 10582687
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  10582913 tgataggaactgatatcaaaatataaactaatagtaagattacaatacaatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 10582814  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  10582813 cttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcttctgcatcttatttataatactaagtcctatagctgttacatagaa 10582714  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  10582713 gtttagtagacagcaattactacacac 10582687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 5e-84
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 10584119 - 10583893
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  10584119 tgataggaactgatatcaaaatataaactaatagtaagattacaatacaatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 10584020  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||    
T  10584019 cttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcttctgcatcttatttataatactaagtcccatagctgttacatagaa 10583920  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  10583919 gtttagtagacagcaattactacacac 10583893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 159; E-Value: 5e-84
Query Start/End: Original strand, 956 - 1174
Target Start/End: Complemental strand, 49122341 - 49122123
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||| ||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  49122341 tgataggaactgatatgaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 49122242  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  49122241 cttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacatagaa 49122142  T
Q  1156 gtttagtagacaacaatta 1174  Q
    |||||| ||||||||||||    
T  49122141 gtttagcagacaacaatta 49122123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 989 - 1182
Target Start/End: Complemental strand, 49122119 - 49121926
Alignment:
Q  989 gtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctctccctaccaatcctttatcccaat 1088  Q
    ||||||||||||||||||||||| | ||| |||||||||  || | |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  49122119 gtaagattacaatataatcccaagaaatttgagagtcttggttctctcccctccaagtattcgagagcttgatctctccctaccaatcctttatcccaat 49122020  T
Q  1089 ccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaagtttagtagacaacaattactacacac 1182  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  49122019 ccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacatagaagtttagtagacaacaattacttcacac 49121926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 49123475 - 49123249
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||| | |||||||||||||  || | |||||||||||||| |||| |    
T  49123475 tgataggaactgatatcaaaatataaactaatagtaagattagaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagtg 49123376  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    |    ||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  49123375 cccaatctctccctaccaatcctttaccccaatccctgaatacctttcttttcttctgcatcttatttataatactaagtcctatagctgttacatagaa 49123276  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  49123275 gtttagtagacagcaattactacacac 49123249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 956 - 1168
Target Start/End: Original strand, 8788533 - 8788749
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  |||| |||||||||||||||||| | ||| |||||||||  || | ||||||||||| || ||| ||    
T  8788533 tgataggaactgatatcaaaatataaactaatagtaatattacaatataatcccaagaaattagagagtcttggttctctcccctccaagaattcgaaag 8788632  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatacta----agtcttatagctgttacat 1151  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    | || |||||| |||||||    
T  8788633 cttggtctctccctacctatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaactcactcctatagcagttacat 8788732  T
Q  1152 agaagtttagtagacaa 1168  Q
    |  ||||||||||||||    
T  8788733 attagtttagtagacaa 8788749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 989 - 1158
Target Start/End: Original strand, 23541003 - 23541176
Alignment:
Q  989 gtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatc--cgagagcttggtctctccctaccaatcctttatccca 1086  Q
    ||||||||||| ||||||||||| | |||| ||||||||  |||| | || |||||||||   | |||||||||||||||||||||||||| ||||||||    
T  23541003 gtaagattacagtataatcccaagaaattcaagagtcttggttttcttccttccaagtattttcaagagcttggtctctccctaccaatccattatccca 23541102  T
Q  1087 atccctgaatgcctttcttttcctctacatc-ttatttataatactaagt-cttatagctgttacatagaagtt 1158  Q
    ||||||||||| | |||||||||| | |||| ||||| |||||||||| | | |||||| ||||||||||||||    
T  23541103 atccctgaatgtccttcttttcctttgcatctttattcataatactaactccctatagcagttacatagaagtt 23541176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 404 - 730
Target Start/End: Complemental strand, 17251641 - 17251310
Alignment:
Q  404 ttgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaacatctaaatgat 503  Q
    ||||||||||||| |||||| |||| || ||| ||||||||||||  |||||||||||||||||| | ||| | | ||||  ||  |||||||| || ||    
T  17251641 ttgtcttccatttttgacagcaaggtcaatgcttcatcaaacaagctctctttacaaagcccattgatcataatactatatgttacaacatctacattat 17251542  T
Q  504 agaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagtatacatatttgg 598  Q
     | | || |  | |||| ||||| |||||   || |||||  ||| ||| |||  |||||  |||||||||||||||     ||| |||||||||||||     
T  17251541 ggcctttcatcaaaagatcctgaaaaaccttctgagcatctgtaagtctaccatctttgcaaagtccatcaacaagtatattgtatgtatacatatttgc 17251442  T
Q  599 cttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcaca 698  Q
    || ||| | ||| ||||| || ||| ||| |||||  |||||||| ||||| |||||| |||||||||||||||| |  || ||| ||||||| || |||    
T  17251441 ctgaataccttgatctttaattttctttagtaatgcaattgccttatcaacttgatggcttttgcacaaagcatctatcaaagaagtgtaagttattaca 17251342  T
Q  699 tcagtaggttggcctctattatgcatctcatc 730  Q
    | ||  ||||| ||||||| ||||||||||||    
T  17251341 ttaggtggttgacctctatcatgcatctcatc 17251310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 958 - 1075
Target Start/End: Original strand, 23540880 - 23541001
Alignment:
Q  958 ataggaattgatatcaaaatat--aaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagta--tccgag 1053  Q
    ||||||| ||||||||||||||  |||||||  ||||||||||| ||||||||||| | |||| ||||||||  |||| | || ||||||||  | | ||    
T  23540880 ataggaactgatatcaaaatatataaactaatagtaagattacagtataatcccaagaaattcaagagtcttggttttcttccttccaagtattttcaag 23540979  T
Q  1054 agcttggtctctccctaccaat 1075  Q
    ||||||||||||||||||||||    
T  23540980 agcttggtctctccctaccaat 23541001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 22425455 - 22425571
Alignment:
Q  30 aaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttcccc 129  Q
    |||||||||||||||||  |||||| |||| ||  || || |||||  ||||||| |||| ||| || ||||| ||||||||||| |||||||||  |||    
T  22425455 aaaagatatagtgtggatggaccataataaaatacatgttactctttaatctaatggtcataatatactttcctatggtgggaaattctttccctcaccc 22425554  T
Q  130 atccgaaatgccacctt 146  Q
    |||| ||||||||||||    
T  22425555 atcctaaatgccacctt 22425571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 22862534 - 22862649
Alignment:
Q  30 aaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttcccc 129  Q
    |||||||||||||||||  |||||| |||| || ||| || |||||  ||||||| | || ||| || ||||| ||||||||||| |||||||||  |||    
T  22862534 aaaagatatagtgtggatggaccataataaaataaatgttactctttaatctaatggccataatatactttcctatggtgggaaattctttccctcaccc 22862633  T
Q  130 atccgaaatgccacct 145  Q
    |||| |||||||||||    
T  22862634 atcctaaatgccacct 22862649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 5101827 - 5101900
Alignment:
Q  72 tcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttccccatccgaaatgccacct 145  Q
    ||||| ||||||| ||| |||||||||||||||||||||| || ||||| |||| |||| || |||||||||||    
T  5101827 tcttaaatctaatggtctaaatctattttcccatggtgggtaactctttaccttacccaccctaaatgccacct 5101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 625 - 760
Target Start/End: Complemental strand, 10130239 - 10130104
Alignment:
Q  625 ttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcat 724  Q
    |||| |||| |||||| |||||||| || || |||| ||| ||||||| |||||| ||||||||||| || | || ||   |||| ||||||| |  |||    
T  10130239 ttaacaatgcgattgctttgtcaacatggtgattttggcataaagcattcaataaagaattgtaagtaattatattaggttgttgacctctatcagacat 10130140  T
Q  725 ctcatctataagatcccaagcatcagagattctccc 760  Q
    ||||  || ||| ||||||||||| |||||||||||    
T  10130139 ctcacttacaagttcccaagcatctgagattctccc 10130104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 640 - 729
Target Start/End: Complemental strand, 41198828 - 41198739
Alignment:
Q  640 ccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcat 729  Q
    |||||||||| ||||||||||| || |||||||  |||||||||||| || |||| | ||| |||||||  | || || |||||||||||    
T  41198828 ccttgtcaacatgatggtttttacataaagcatgtaataaggaattgcaactgattatatcggtaggttaacttccataatgcatctcat 41198739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 2e-86; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 6081414 - 6081188
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||  || | |||||||||||||| ||||||    
T  6081414 tgataggaactgatatcaaaatataaactaatagtaagattacaatacaatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagag 6081315  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6081314 cttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcttctgcatcttatttataatactaagtcctatagctgttacatagaa 6081215  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    |||||||||||| ||||||||||||||    
T  6081214 gtttagtagacagcaattactacacac 6081188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 955 - 1182
Target Start/End: Complemental strand, 6082622 - 6082395
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||  || | |||||||||||||| |||||    
T  6082622 ctgataggaactgatatcaaaatataaactaatagtaagattacaatacaatcccaagaaattcgagagtcttggttctctcccctccaagtattcgaga 6082523  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacataga 1154  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||    
T  6082522 gcttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcttctgcatcttatttataataataagtcctatagctgttacataga 6082423  T
Q  1155 agtttagtagacaacaattactacacac 1182  Q
    ||||||||||||| ||||||||||||||    
T  6082422 agtttagtagacagcaattactacacac 6082395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 550 - 740
Target Start/End: Complemental strand, 8651447 - 8651253
Alignment:
Q  550 tcttccacttttgcgtagtccatcaacaagt-gtaagtata----catatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttg 644  Q
    ||||||| |||||| |||||||||||||||| ||  |||||    ||||| ||| | |||||  ||||||||||||||| | |||||||  |||||| ||    
T  8651447 tcttccatttttgcatagtccatcaacaagtagtgtgtatatgaacatatatggttcaattctatggtctttgatcttcttcaataatgcaattgccatg 8651348  T
Q  645 tcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagatcc 740  Q
    | ||||| |||||||||| |||| ||||| ||||| ||| |||||||||| |  ||||   |||| | ||||| |||||| |||||||||||||||    
T  8651347 taaaccttatggtttttgaacaatgcatcaaataaagaagtgtaagtgattatgtcagcttgttgacatctatcatgcat-tcatctataagatcc 8651253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 956 - 1074
Target Start/End: Complemental strand, 17901274 - 17901154
Alignment:
Q  956 tgataggaattgatatcaaaa--tataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgag 1053  Q
    |||||| || |||||||||||  |||||| |||  |||| ||||||||| | |||||| | |||||||||||||  |  | ||||||||||| || ||||    
T  17901274 tgatagaaactgatatcaaaacatataaattaatagtaatattacaatagattcccaagaaattcgagagtcttggtactctcccctccaagaattcgag 17901175  T
Q  1054 agcttggtctctccctaccaa 1074  Q
    |||||||||||||||| ||||    
T  17901174 agcttggtctctccctcccaa 17901154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 856 - 955
Target Start/End: Original strand, 13093653 - 13093752
Alignment:
Q  856 ccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcctcttttagcaatagtgttaaatacatatgtggc 955  Q
    |||||| |||||||||||| |||||||| || |||| ||||||||| ||||||| ||||| |||||| |     ||||||| ||| ||||||||||||||    
T  13093653 ccaccaatttattcttacacaatccattaattatgatattgtagctttgaacatcaggaggcactccccaccgggcaatagagttgaatacatatgtggc 13093752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 378 - 476
Target Start/End: Complemental strand, 8651622 - 8651524
Alignment:
Q  378 aagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatca 476  Q
    |||||||| |||| ||  |||| || ||||||||||||| ||| ||||||||||  || ||||  ||||||  |||||||||||||||| ||| |||||    
T  8651622 aagttacaccatcaggattgcacccgttgtcttccatttttgagagtaaggacaacgcttcatataacaagctctctttacaaagcccagtaatcatca 8651524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 12732313 - 12732260
Alignment:
Q  78 atctaattgtcaaaatctattttcccatggtgggaaaatctttcccttccccat 131  Q
    ||||||| ||||| || || ||||||||||||||||| |||||||||| |||||    
T  12732313 atctaatggtcaatatttactttcccatggtgggaaactctttccctttcccat 12732260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 14735462 - 14735385
Alignment:
Q  39 agtgtggagagaccatcataagatcaatattcctcttatatctaat-tgtcaaaatctattttcccatggtgggaaaa 115  Q
    |||||| |||||| |||||||||||||| ||||||||| ||| |||   |||||| | ||||| ||||||||||||||    
T  14735462 agtgtgaagagactatcataagatcaatgttcctcttaaatcaaatgattcaaaaacaatttttccatggtgggaaaa 14735385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 160; Significance: 1e-84; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 955 - 1182
Target Start/End: Original strand, 205588 - 205815
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||  || | |||||||||||||| |||||    
T  205588 ctgataggaactgatatcaaaatataaactaatagtaagattacaatacaatcccaagaaattcgagagtcttggttctctcccctccaagtattcgaga 205687  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacataga 1154  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  205688 gcttggtctctccctaccaatcctttatcccaatccctgaatatctttcttttcttctgcatcttatttataatactaagtcctatagctgttacataga 205787  T
Q  1155 agtttagtagacaacaattactacacac 1182  Q
    ||||||||||||| ||||||||||||||    
T  205788 agtttagtagacagcaattactacacac 205815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 955 - 1136
Target Start/End: Original strand, 211665 - 211846
Alignment:
Q  955 ctgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgaga 1054  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||||  || | |||||||||||||| |||||    
T  211665 ctgataggaactgatatcaaaatataaactaatagtaagattacaatacaatcccaagaaattcgagagtcttggttctctcccctccaagtattcgaga 211764  T
Q  1055 gcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtc 1136  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  211765 gcttggtctctccctaccaatcctttatcccaatccctgaatacctttcttttcttctgcatcttatttataatactaagtc 211846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 142; Significance: 6e-74; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 989 - 1182
Target Start/End: Original strand, 177896 - 178089
Alignment:
Q  989 gtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctctccctaccaatcctttatcccaat 1088  Q
    ||||||||||||||||||||||| | |||||||||||||  || | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  177896 gtaagattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagtattcgagagcttggtctctccctaccaatcctttaccccaat 177995  T
Q  1089 ccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaagtttagtagacaacaattactacacac 1182  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  177996 ccctgaatacctttcttttcctctgcatcttatttataatactaagtcctatagctgttacatagaaatttagtagacagcaattactacacac 178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 133; Significance: 1e-68; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 956 - 1181
Target Start/End: Complemental strand, 11289 - 11060
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||  || | |||| ||||||| | ||||||    
T  11289 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtcttggttctctcccttccaagttttcgagag 11190  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtct----tatagctgttacat 1151  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||||||||| |||    |||||| |||||||    
T  11189 cttggtctctccctaccaatcctttatcccaatccctgaatatctttcttttcttctgcatcttatttataatactaactctctcctatagcagttacat 11090  T
Q  1152 agaagtttagtagacaacaattactacaca 1181  Q
    |||||||||||||||| |||||||| ||||    
T  11089 agaagtttagtagacagcaattactgcaca 11060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 956 - 1182
Target Start/End: Complemental strand, 12437 - 12212
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| | |||||||||||||||||||  |||| |||||||||||||||||| | ||| |||||||||  || | |||||||||||  | | ||||    
T  12437 tgataggaacttatatcaaaatataaactaatagtaatattacaatataatcccaagaaattagagagtcttggttctctcccctccaagagttcaagag 12338  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttatagctgttacatagaa 1155  Q
    ||||||||||||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  12337 cttggtctctccctacctatcctttatcccaatccctgaataactttcttttcctctgcatcttatttataataccaagtcctatagctgttacatagaa 12238  T
Q  1156 gtttagtagacaacaattactacacac 1182  Q
    | |||||||||||||||||||||||||    
T  12237 g-ttagtagacaacaattactacacac 12212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 9e-67; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 9e-67
Query Start/End: Original strand, 945 - 1182
Target Start/End: Complemental strand, 33790106 - 33789866
Alignment:
Q  945 acatatgtggctgataggaattgatatcaaaatataaactaaatgtaag-attacaatata--atcccaaaatattcgagagtcttaattttttcccctc 1041  Q
    |||||||||  |||||| || ||||||||||||||||| | |  ||||  |||||||||||  ||||||| | |||||||||||||  || | |||||||    
T  33790106 acatatgtgtgtgatagaaactgatatcaaaatataaatttatagtaattattacaatatataatcccaagaaattcgagagtcttggttctctcccctc 33790007  T
Q  1042 caagtatccgagagcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagtcttata 1141  Q
    |||| ||  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  33790006 caagaatttgagagcttggtctctccctacctatcctttatcccaatccctgaatacctttcttttcctctgcatcttatttataatactaagtcctata 33789907  T
Q  1142 gctgttacatagaagtttagtagacaacaattactacacac 1182  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  33789906 gctgttacatagaagtttagtagacagcaattactacacac 33789866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 1000 - 1169
Target Start/End: Complemental strand, 12325022 - 12324849
Alignment:
Q  1000 atataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctctccctaccaatcctttatcccaatccctgaatgcc 1099  Q
    ||||||||||||   |||||||||||||  || | ||||||||||  || |||||| ||||||||||||||||||||||||||| ||||||||||||  |    
T  12325022 atataatcccaaggaattcgagagtcttggttctctcccctccaaaaattcgagagtttggtctctccctaccaatcctttatcgcaatccctgaatagc 12324923  T
Q  1100 tttcttttcctctacatcttatttataatactaagtct----tatagctgttacatagaagtttagtagacaac 1169  Q
    ||||||||||| | |||||||||||||||||||| |||    |||||  |||||| | ||||||||||||||||    
T  12324922 tttcttttcctttgcatcttatttataatactaactctctcctatagtagttacacataagtttagtagacaac 12324849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 6182190 - 6182088
Alignment:
Q  46 agagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttccccatccgaaatgccacct 145  Q
    |||||| |||||||||||||| ||| ||||| ||||||| ||||||||||| ||||| ||||||| |||||||||||||| |||| || ||||| |||||    
T  6182190 agagactatcataagatcaatgttcatcttaaatctaatggtcaaaatctactttcctatggtggaaaaatctttcccttacccaccctaaatgtcacct 6182091  T
Q  146 tgt 148  Q
    |||    
T  6182090 tgt 6182088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 1051 - 1158
Target Start/End: Complemental strand, 18955485 - 18955376
Alignment:
Q  1051 gagagcttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatc-ttatttataatactaagt-cttatagctgtta 1148  Q
    ||||| |||||||||||||||||||||||||||| |||  | |||| |  |||||||||||| |||| |||||||||| ||||| | | |||||| ||||    
T  18955485 gagagattggtctctccctaccaatcctttatccaaataaccgaattctcttcttttcctctgcatctttatttataacactaactccctatagcagtta 18955386  T
Q  1149 catagaagtt 1158  Q
    |||| |||||    
T  18955385 cataaaagtt 18955376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 5142488 - 5142602
Alignment:
Q  30 aaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttcccc 129  Q
    |||||||||||||||||  |||||| |||| ||| || ||||||||  ||||||| | || |||||| |||  |||||||| ||| |||||||||  |||    
T  5142488 aaaagatatagtgtggatggaccataataaaatctatgttcctctttaatctaatggacataatctactttttcatggtggaaaattctttccctcaccc 5142587  T
Q  130 atccgaaatgccacc 144  Q
    | || ||||||||||    
T  5142588 accctaaatgccacc 5142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 6183091 - 6183163
Alignment:
Q  72 tcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttccccatccgaaatgccacc 144  Q
    ||||| ||||||| ||| ||||||||||| |||||||||| || | |||||||| |||| || ||||||||||    
T  6183091 tcttaaatctaatggtctaaatctatttttccatggtgggtaactttttcccttacccaccctaaatgccacc 6183163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 115; Significance: 8e-58; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 956 - 1167
Target Start/End: Complemental strand, 80930 - 80715
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    ||||||||| |||||||||||||||||||||  |||| |||||||||||||||||| | |||||||||||||  || | ||||||||||| || ||||||    
T  80930 tgataggaactgatatcaaaatataaactaatagtaatattacaatataatcccaataaattcgagagtcttggttctctcccctccaagaattcgagag 80831  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatacta----agtcttatagctgttacat 1151  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||    | || |||||| |||||||    
T  80830 cttggtctctccctacctatcctttatcccaatccctgaatacctttctttttctctgcatcttatttataatactaactcactcctatagcagttacat 80731  T
Q  1152 agaagtttagtagaca 1167  Q
    |  |||||||||||||    
T  80730 attagtttagtagaca 80715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 966 - 1133
Target Start/End: Complemental strand, 79724 - 79557
Alignment:
Q  966 tgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctct 1065  Q
    |||||||||||||||||||||  |||| |||||||||||||||||| | |||||||||||||  || | ||||||||||| || ||||||||||||||||    
T  79724 tgatatcaaaatataaactaatagtaatattacaatataatcccaagaaattcgagagtcttggttctctcccctccaagaattcgagagcttggtctct 79625  T
Q  1066 ccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaa 1133  Q
    || |||| ||||||||||| ||||| ||||| ||||| ||||||||| ||||||||||||||||||||    
T  79624 ccgtacctatcctttatcctaatccatgaatacctttattttcctctgcatcttatttataatactaa 79557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 7e-49; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 967 - 1165
Target Start/End: Complemental strand, 40254605 - 40254408
Alignment:
Q  967 gatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttggtctctc 1066  Q
    |||||||||||||||| |||  |||| ||||||||| |||||||| | |||||||||||||  || | ||||||||||| ||  ||||||||||||||||    
T  40254605 gatatcaaaatataaattaatagtaatattacaatagaatcccaagaaattcgagagtcttggttctctcccctccaagaatt-gagagcttggtctctc 40254507  T
Q  1067 cctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatcttatttataatactaagt-cttatagctgttacatagaagtttagtaga 1165  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  || | | |||||| |||||||||||||||||||||    
T  40254506 cctaccaatcctttatcccaatccctgaat-cctttcttttcctctgcatcttatttataatatgaactccctatagcagttacatagaagtttagtaga 40254408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 300 - 679
Target Start/End: Complemental strand, 9782978 - 9782587
Alignment:
Q  300 tagcgatcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtg-- 397  Q
    |||| ||||||||||  ||||||| ||| ||||||||||| | || |||||||||||||||| | ||| |||||| | |||||||  |||| || |||      
T  9782978 tagcaatcatttcacaaagaagtttcaccgccttatcattttggtcgctttcaaacaaagcacgaatacgagtttcataagttactgcatcaggagtgag 9782879  T
Q  398 -----caaccattgtcttccatttctgacagtaaggacattgcatcatcaaacaagtcctctttacaaagcccattaaccatcacattatacattggaac 492  Q
         |||||  |||||||||||| ||| |||||||||| ||| ||||| || ||  |||||||||| |||||||||| ||||||| |||||||   | |    
T  9782878 gagtgcaaccgatgtcttccatttttgagagtaaggacaatgcttcatcgaaaaaaccctctttacagagcccattaatcatcacagtatacatcctagc 9782779  T
Q  493 atctaaatgatagaccttaacaagaagaacctgataaaccgcttgtgcatccttaaatcttccacttttgcgtagtccatcaacaagt-----gtaagta 587  Q
    ||||||||||||  | ||||    |||| || ||||||||  |||||||||||||| ||||||| ||||||  |||||||||||||||     ||| |||    
T  9782778 atctaaatgataacctttaatcgtaagatcccgataaaccctttgtgcatccttaagtcttccatttttgcacagtccatcaacaagtatagtgtatgta 9782679  T
Q  588 tacatatttggcttaattcattggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataa 679  Q
     |||||| ||||| ||||| || |||||| ||||| ||||| || |  ||||||||||||||||||||| ||||||||||||||||||||||    
T  9782678 cacatatctggctgaattccttcgtctttcatctttgttaacaacgcaattgccttgtcaacctgatggattttgcacaaagcatccaataa 9782587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 960 - 1068
Target Start/End: Complemental strand, 21661290 - 21661182
Alignment:
Q  960 aggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagagcttg 1059  Q
    ||||| |||||||||||||||||||||  |||||||||||||||| |||||| | |||||||||||||  || | ||||||||||  || ||||||||||    
T  21661290 aggaactgatatcaaaatataaactaatagtaagattacaatatattcccaagaaattcgagagtcttggttctctcccctccaataattcgagagcttg 21661191  T
Q  1060 gtctctccc 1068  Q
    |||||||||    
T  21661190 gtctctccc 21661182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 956 - 1133
Target Start/End: Original strand, 2411061 - 2411237
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtcttaattttttcccctccaagtatccgagag 1055  Q
    |||||| || |||||||||||||||||||||  |||| ||||||||  |||||||| | ||| ||||||||| ||| | ||||||||| | || |  |||    
T  2411061 tgatagaaactgatatcaaaatataaactaatagtaatattacaatcgaatcccaagaaatttgagagtcttgattctctcccctccaggaattc--gag 2411158  T
Q  1056 cttggtctctccctaccaatcctttatcccaatccctgaatgcctttcttttcctctacatc-ttatttataatactaa 1133  Q
    ||||||||||||||||||||||||||||| |||  | |||||||  | ||||||||| || | || |||||||||||||    
T  2411159 cttggtctctccctaccaatcctttatccaaataaccgaatgcccctattttcctctgcaactttgtttataatactaa 2411237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 956 - 1027
Target Start/End: Original strand, 26246968 - 26247039
Alignment:
Q  956 tgataggaattgatatcaaaatataaactaaatgtaagattacaatataatcccaaaatattcgagagtctt 1027  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||    
T  26246968 tgataggaactgatatcaaaatataaactaatagtaagattacaatataatcccaagaaattcgagagtctt 26247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 53; Significance: 8e-21; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 639 - 811
Target Start/End: Complemental strand, 3321 - 3149
Alignment:
Q  639 gccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagat 738  Q
    ||||||||||| |||||||||||||| |||||||| | ||| |||||||||||||| | |||||  ||||| || |||| | |||||||||| | ||| |    
T  3321 gccttgtcaacatgatggtttttgcataaagcatctattaatgaattgtaagtgattatatcagctggttgaccactatcacgcatctcatcaacaagct 3222  T
Q  739 cccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagc 811  Q
    |||||||||  ||||||||||||  ||||   | |||||| || || |||||||| |||||  ||||||||||    
T  3221 cccaagcataggagattctcccagatttgcacaaaccatcaattagagaattgtaagttaccgtatcaggagc 3149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 53; Significance: 8e-21; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 624 - 912
Target Start/End: Complemental strand, 22446 - 22158
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||| ||||| ||||| || ||||| |||||||| |||||||||||||  ||||||||||| || | |||||   |||| |||| || |||||    
T  22446 gttaataatgtaattgctttgtccacatgatgttttttgcataaagcatccaatatagaattgtaagtaattatatcaggttgttgccctcgataatgca 22347  T
Q  724 tctcatctataagatcccaagcatcagagattctcccatttttgataagaccatcgataagtgaattgtatgttacaatatcaggagccatgttttttat 823  Q
    ||||||| | ||| ||| ||||||  || ||||| |||  ||||   |  ||||||||||| ||| | || ||||  | |||||||   || | |||       
T  22346 tctcatcgacaagttccaaagcatatgatattcttccagatttgcacaatccatcgataagggaactataagttatcacatcaggaaaaatttgtttgtg 22247  T
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattag 912  Q
    ||||| ||||||||  || || | ||||| ||||||||||||| ||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  22246 atgcatttctttgaaaagtttcatggcttcatccaccattttaatcttacaaaatccattaatcatgatattgtagctctgaacattag 22158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 8e-21; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 636 - 760
Target Start/End: Original strand, 121388 - 121512
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| ||||| | ||  | |||||| ||||||| |||||||| ||| | ||    
T  121388 attgccttgtcaacttgatgatttttgcataaagcatgcaataaggaattgtatgtgataatattggcaggttgacctctatcatgcatctgatcaagaa 121487  T
Q  736 gatcccaagcatcagagattctccc 760  Q
    | ||||| |||| ||||||||||||    
T  121488 gctcccatgcatgagagattctccc 121512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 305 - 446
Target Start/End: Original strand, 121052 - 121193
Alignment:
Q  305 atcatttcacgtagaagttccacagccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccat 404  Q
    ||||||||||||||||||| | | |||||||||||||  |   ||| ||| | ||| |  |||| ||||| | ||||||||||||| || ||||||||||    
T  121052 atcatttcacgtagaagtttctctgccttatcattctcatcatttttaaaaagagcgtaaataatagtttcataagttacaacatcaggagtgcaaccat 121151  T
Q  405 tgtcttccatttctgacagtaaggacattgcatcatcaaaca 446  Q
    |||||||||||| |  ||||| || ||| || ||||||||||    
T  121152 tgtcttccattttttccagtagggtcatagcttcatcaaaca 121193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 858 - 922
Target Start/End: Complemental strand, 137243 - 137179
Alignment:
Q  858 accattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
    ||||||||| ||||||| |||||||| ||||||| ||| ||||| ||| ||| ||||||||||||    
T  137243 accattttaatcttacagaatccattaatcatgatattatagctctgagcatcaggagccactcc 137179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 848 - 922
Target Start/End: Complemental strand, 140177 - 140103
Alignment:
Q  848 ggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
    ||||| ||| ||||||||| ||||||| |||||||| ||||||| | | ||| ||||| ||| ||||||||||||    
T  140177 ggcttcatcaaccattttaatcttacaaaatccattaatcatgatactataggtatgagcatcaggagccactcc 140103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 824 - 913
Target Start/End: Original strand, 121567 - 121656
Alignment:
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattagg 913  Q
    ||||| |||||| | || ||| | ||||| ||| ||||||||| |||||||||| ||||| || |||| | ||||||| |||||||||||    
T  121567 atgcatttctttaaagaaattcaaggcttcatcaaccattttaatcttacataaaccattaataatgatagtgtagctgtgaacattagg 121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 457 - 330
Alignment:
Q  17 agaagaaagtgggaaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaat 116  Q
    |||||||||||| |||| || |  |||| |||||| |||||||||||||| ||| ||||| ||||||| ||||||| ||| ||||| |||||||||||||    
T  457 agaagaaagtggaaaaaaatcttatgtgaagagactatcataagatcaatgttcatcttaaatctaatggtcaaaacctactttcctatggtgggaaaat 358  T
Q  117 ctttcccttccccatccgaaatgccacc 144  Q
    |||| |||| |||| || ||||| ||||    
T  357 cttttccttacccaccctaaatgtcacc 330  T

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Target: scaffold1052; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 1542 - 1615
Alignment:
Q  72 tcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttccccatccgaaatgccacct 145  Q
    ||||| ||||||| ||| ||||||||||||| |||||||| || |||||||||| |||| || |||||||||||    
T  1542 tcttaaatctaatggtctaaatctattttccaatggtgggtaactctttcccttacccaccctaaatgccacct 1615  T

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Target: scaffold0652 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 636 - 760
Target Start/End: Original strand, 1203 - 1327
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||| ||||| ||||| || ||||| |  || ||||||||||||||||||||||| | |||||| ||||||| |||||||| ||| | ||    
T  1203 attgccttgtcaacttgatgatttttacataaagcgtgtaagaaggaattgtaagtgatcacatcggcaggttgacctctatcatgcatctgatcaagaa 1302  T
Q  736 gatcccaagcatcagagattctccc 760  Q
    | ||||| |||| ||| ||||||||    
T  1303 gctcccatgcatgagaaattctccc 1327  T

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Target: scaffold0573 (Bit Score: 43; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 624 - 730
Target Start/End: Complemental strand, 4240 - 4134
Alignment:
Q  624 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgca 723  Q
    ||||||||||  |||||||||||| |  ||||||||||||| |||||||||||||  ||| ||||||| || | |||||  ||||| ||||||| |||||    
T  4240 gttaataatgcaattgccttgtcacctggatggtttttgcataaagcatccaatagagaactgtaagtaattatatcaggtggttgacctctatcatgca 4141  T
Q  724 tctcatc 730  Q
    |||||||    
T  4140 tctcatc 4134  T

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Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 848 - 922
Target Start/End: Original strand, 53716 - 53790
Alignment:
Q  848 ggcttgatccaccattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcc 922  Q
    ||||| ||||||| ||||| ||||||| |||||||| ||||||| |||||||||||||||||||| || ||||||    
T  53716 ggctttatccacctttttaatcttacaaaatccattaatcatgatattgtagctatgaacattagcagtcactcc 53790  T

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Target: scaffold0654 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 636 - 760
Target Start/End: Original strand, 1128 - 1252
Alignment:
Q  636 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataa 735  Q
    |||||||||||||| ||||||||||| || ||||| |  || ||||||||||||||||||||||  | | |||| ||||||| |||||||| ||| | ||    
T  1128 attgccttgtcaacttgatggtttttacataaagcgtgtaagaaggaattgtaagtgatcacatttgcatgttgacctctatcatgcatctaatcaagaa 1227  T
Q  736 gatcccaagcatcagagattctccc 760  Q
    | ||||| |||| ||| ||| ||||    
T  1228 gctcccatgcatgagaaattttccc 1252  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 639 - 693
Target Start/End: Original strand, 126034 - 126088
Alignment:
Q  639 gccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtga 693  Q
    |||||||||| ||||||||||||||| |||||||| | |||||||||||||||||    
T  126034 gccttgtcaatctgatggtttttgcataaagcatctattaaggaattgtaagtga 126088  T

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Target: scaffold0019; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 858 - 935
Target Start/End: Original strand, 126253 - 126330
Alignment:
Q  858 accattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcctcttttagcaata 935  Q
    |||||||||  ||||||||||||||| ||||||| | | ||||||||| ||| ||||||||||| | |||||| ||||    
T  126253 accattttaaccttacataatccattaatcatgatactatagctatgagcatcaggagccactcttattttagaaata 126330  T

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Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 639 - 748
Target Start/End: Original strand, 31225 - 31334
Alignment:
Q  639 gccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataagat 738  Q
    ||||||||||| ||||||||||| || |||||||  ||||||||| | |||||||| ||||  | | |||||||||||| |||||||| ||| | ||| |    
T  31225 gccttgtcaacatgatggtttttacataaagcatgtaataaggaagtataagtgattacattgggacgttggcctctatcatgcatctgatcaagaagct 31324  T
Q  739 cccaagcatc 748  Q
     |||||||||    
T  31325 tccaagcatc 31334  T

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Target: scaffold0086; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 824 - 901
Target Start/End: Original strand, 31401 - 31478
Alignment:
Q  824 atgcaattctttgaggagattgacggcttgatccaccattttattcttacataatccatttatcatgacattgtagct 901  Q
    ||||| |||| ||| |||||| | ||||| ||| || |||||| |||||||||||||||| || |||| |||||||||    
T  31401 atgcatttctgtgaagagattcaaggcttcatcaacaattttaatcttacataatccattaataatgatattgtagct 31478  T

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Target: scaffold0177 (Bit Score: 37; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 638 - 758
Target Start/End: Complemental strand, 27442 - 27322
Alignment:
Q  638 tgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagtaggttggcctctattatgcatctcatctataaga 737  Q
    |||||||||||| || |||||||| || ||||||| ||| |||||  |||| ||||| ||||| | |||||| ||||||  |||||||| ||| | |||     
T  27442 tgccttgtcaacttggtggtttttacataaagcatgcaagaaggaggtgtatgtgattacatcggcaggttgacctctagcatgcatctgatcaagaagc 27343  T
Q  738 tcccaagcatcagagattctc 758  Q
    ||||| |||| ||||||||||    
T  27342 tcccatgcatgagagattctc 27322  T

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Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 447
Target Start/End: Complemental strand, 27720 - 27638
Alignment:
Q  365 ataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaaggacattgcatcatcaaacaa 447  Q
    |||| ||||| | ||||||||||||| || ||||||||||| |||||||||| |  ||||| || ||| || |||||||||||    
T  27720 ataatagtttcataagttacaacatcaggagtgcaaccattatcttccattttttccagtagggtcatagcttcatcaaacaa 27638  T

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Target: scaffold0725 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 5883 - 5768
Alignment:
Q  30 aaaagatatagtgtggagagaccatcataagatcaatattcctcttatatctaattgtcaaaatctattttcccatggtgggaaaatctttcccttcccc 129  Q
    |||||||||||||| || ||||||| |||| ||   |  |||||||  |||||||   ||||||||| |||| |||||||||||||||||||| |  |||    
T  5883 aaaagatatagtgttgacagaccataataaaatatgtgctcctctttaatctaatgaccaaaatctactttctcatggtgggaaaatctttccttcaccc 5784  T
Q  130 atccgaaatgccacct 145  Q
    |||| |||| ||||||    
T  5783 atcctaaataccacct 5768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2177 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold2177
Description:

Target: scaffold2177; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 329 - 466
Target Start/End: Complemental strand, 307 - 171
Alignment:
Q  329 gccttatcattcttgttgctttcaaacaaagcatggataagagtttgaaaagttacaacatcgggcgtgcaaccattgtcttccatttctgacagtaagg 428  Q
    |||||||||||||||  | |||  ||||||||| | |||| ||||| | |||||||||||||  | ||  ||||||| ||||||||||   ||| ||||     
T  307 gccttatcattcttgcggtttttgaacaaagcacgaataatagtttcataagttacaacatcatgagtcaaaccattttcttccatttgcaaca-taagt 209  T
Q  429 acattgcatcatcaaacaagtcctctttacaaagccca 466  Q
    ||| ||| |||||||||||  ||||| |||||||||||    
T  208 acaatgcttcatcaaacaaaccctctctacaaagccca 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 639 - 692
Target Start/End: Complemental strand, 6284 - 6231
Alignment:
Q  639 gccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtg 692  Q
    ||||||||||| |||||||||||||| || ||||| | ||| ||||||||||||    
T  6284 gccttgtcaacatgatggtttttgcataatgcatctattaaagaattgtaagtg 6231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 858 - 923
Target Start/End: Original strand, 48033 - 48098
Alignment:
Q  858 accattttattcttacataatccatttatcatgacattgtagctatgaacattaggagccactcct 923  Q
    ||||||||| ||||||| |||||||| ||||||| | | ||||||| | ||| |||||||||||||    
T  48033 accattttaatcttacagaatccattaatcatgatactatagctatcagcatcaggagccactcct 48098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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