View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12918_high_11 (Length: 332)
Name: NF12918_high_11
Description: NF12918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12918_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 19 - 322
Target Start/End: Complemental strand, 6488658 - 6488357
Alignment:
| Q |
19 |
ggaacggttttgtggcagtgttgtaacggagtttccttaggattcttggtgggataactctggtggccatcaaccggtcaaagatgatttatatgatata |
118 |
Q |
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| T |
6488658 |
ggaacggttttgtggcagtgttgtaacggagtttccttaggattcttggtgggataactctggtggccatcaaccggtcaaagatgatttatatgatata |
6488559 |
T |
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| Q |
119 |
aataagaagatatatgttttgatatgatgaatgaaaaaaccagttacttttgttaatgtaatgagatacaacaaaaatgtgtatgcttgtgaagtgagaa |
218 |
Q |
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| T |
6488558 |
aacaagaagatatatgttttgatatgatgaat-aaaaaaccagatacttttgttaatgtaatgagatacaac-aaaatgtgtatgcttgtgaagtaagaa |
6488461 |
T |
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| Q |
219 |
tgaattagaaggagatgtataaataagggtgaaaagaagaatgtggtagctaaaagaaaggagggtgtgattaaaaaagataaaaagagtcaagtggatg |
318 |
Q |
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| T |
6488460 |
tgaattagaaggagatgtataaataggggtgaaaagaagaatgtggtagctaaaagaaaggagggtgtgattaaaaaagataaaaagagtcaagtggatg |
6488361 |
T |
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| Q |
319 |
atgt |
322 |
Q |
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|||| |
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| T |
6488360 |
atgt |
6488357 |
T |
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