View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12918_low_20 (Length: 241)
Name: NF12918_low_20
Description: NF12918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12918_low_20 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 51121280 - 51121056
Alignment:
| Q |
1 |
tacatttcaaaagttcaaacttccacagagcagcctcagaatgctagcaaacaagacttccatgatgacgcaaaaagagttccctctctctatctttgaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
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| T |
51121280 |
tacatttcaaaagttcaaacttccacagagcagcctcagaatgctagcaaacaagacaaccatgatgacgcgaaaagagttccctctctctatctttgaa |
51121181 |
T |
|
| Q |
101 |
atgataagggaaaggaacaaatatctttctcaacgatgaccttgaaaagactattgaggcaacaaaatcagcatggactttatagcaatacctcaagttg |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51121180 |
atgataagagaaaggaacaaatatctttctcaacgatgaccttgaaaagactattgaggcaacaaaatcagcatggactttatagcaatacctcaagttg |
51121081 |
T |
|
| Q |
201 |
atcactctcaattgtgtgcagtttt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
51121080 |
atcactctcaattgtgtgcagtttt |
51121056 |
T |
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