View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1291_low_45 (Length: 321)

Name: NF1291_low_45
Description: NF1291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1291_low_45
NF1291_low_45
[»] scaffold0038 (1 HSPs)
scaffold0038 (3-114)||(24304-24418)
[»] chr6 (18 HSPs)
chr6 (3-114)||(28223806-28223920)
chr6 (217-306)||(32784737-32784826)
chr6 (217-306)||(25924847-25924936)
chr6 (3-43)||(28328740-28328780)
chr6 (3-43)||(28506376-28506416)
chr6 (218-305)||(28965824-28965911)
chr6 (217-306)||(28647418-28647507)
chr6 (218-306)||(9954548-9954636)
chr6 (218-306)||(11785355-11785443)
chr6 (215-270)||(27102112-27102167)
chr6 (215-270)||(27143934-27143989)
chr6 (218-255)||(25127867-25127904)
chr6 (218-302)||(1688360-1688443)
chr6 (217-305)||(3660337-3660425)
chr6 (218-306)||(15328489-15328577)
chr6 (218-306)||(15722486-15722574)
chr6 (218-306)||(19789059-19789147)
chr6 (213-253)||(33656771-33656811)
[»] chr8 (33 HSPs)
chr8 (218-306)||(43587641-43587729)
chr8 (218-306)||(9048299-9048387)
chr8 (208-306)||(29509256-29509354)
chr8 (218-306)||(7678732-7678820)
chr8 (217-305)||(21273694-21273782)
chr8 (217-305)||(30943823-30943911)
chr8 (215-306)||(31806296-31806387)
chr8 (218-305)||(39021427-39021514)
chr8 (212-306)||(34970201-34970295)
chr8 (218-306)||(6161948-6162036)
chr8 (218-306)||(28927681-28927769)
chr8 (218-306)||(37562124-37562212)
chr8 (210-306)||(40102015-40102111)
chr8 (218-306)||(43602406-43602494)
chr8 (227-306)||(7559327-7559406)
chr8 (218-276)||(10644814-10644873)
chr8 (209-276)||(13884173-13884240)
chr8 (215-306)||(13884313-13884404)
chr8 (212-299)||(43873681-43873768)
chr8 (218-276)||(16699581-16699639)
chr8 (217-255)||(35937546-35937584)
chr8 (218-291)||(1332466-1332539)
chr8 (218-310)||(44086491-44086584)
chr8 (217-276)||(5600999-5601059)
chr8 (217-276)||(5639561-5639621)
chr8 (218-306)||(6849244-6849332)
chr8 (218-306)||(8841030-8841118)
chr8 (246-294)||(23587652-23587700)
chr8 (209-305)||(24116031-24116127)
chr8 (218-266)||(26294189-26294237)
chr8 (218-266)||(26307446-26307494)
chr8 (218-306)||(28156203-28156291)
chr8 (218-306)||(35818937-35819025)
[»] chr5 (28 HSPs)
chr5 (214-306)||(12718363-12718455)
chr5 (213-306)||(36548363-36548456)
chr5 (214-306)||(12779589-12779681)
chr5 (214-255)||(42225800-42225841)
chr5 (217-305)||(22920476-22920564)
chr5 (218-276)||(9168177-9168236)
chr5 (209-278)||(9939442-9939512)
chr5 (216-306)||(31006057-31006147)
chr5 (212-276)||(18695312-18695377)
chr5 (216-304)||(3263493-3263581)
chr5 (261-301)||(10372230-10372270)
chr5 (218-306)||(19271859-19271947)
chr5 (213-301)||(35972569-35972657)
chr5 (218-302)||(36572691-36572775)
chr5 (218-289)||(14914372-14914443)
chr5 (215-306)||(34381009-34381100)
chr5 (212-254)||(15622038-15622080)
chr5 (216-306)||(15639383-15639473)
chr5 (215-257)||(19952008-19952050)
chr5 (209-270)||(31748327-31748389)
chr5 (218-276)||(38500943-38501001)
chr5 (217-306)||(19127123-19127212)
chr5 (212-276)||(6529013-6529077)
chr5 (218-306)||(26660394-26660482)
chr5 (218-306)||(26931986-26932074)
chr5 (258-306)||(32053791-32053839)
chr5 (218-306)||(39840692-39840780)
chr5 (217-276)||(40829413-40829473)
[»] chr4 (39 HSPs)
chr4 (212-306)||(47998588-47998682)
chr4 (216-304)||(25725679-25725767)
chr4 (216-304)||(51224823-51224911)
chr4 (219-306)||(45548767-45548854)
chr4 (218-305)||(48722069-48722156)
chr4 (212-304)||(20956567-20956659)
chr4 (218-305)||(53662412-53662499)
chr4 (221-279)||(43759161-43759219)
chr4 (215-305)||(55996419-55996509)
chr4 (218-303)||(54165147-54165232)
chr4 (217-306)||(55960699-55960788)
chr4 (218-266)||(169525-169573)
chr4 (218-302)||(6290462-6290545)
chr4 (218-306)||(9162066-9162154)
chr4 (218-306)||(12241058-12241146)
chr4 (217-305)||(30042133-30042221)
chr4 (218-306)||(33820319-33820407)
chr4 (218-306)||(35037609-35037697)
chr4 (217-305)||(39881014-39881102)
chr4 (218-306)||(40755921-40756009)
chr4 (218-306)||(44170602-44170690)
chr4 (218-306)||(49424803-49424891)
chr4 (218-306)||(51318703-51318791)
chr4 (215-306)||(15596393-15596484)
chr4 (216-306)||(39010120-39010210)
chr4 (250-304)||(45923412-45923465)
chr4 (215-304)||(1031752-1031841)
chr4 (212-276)||(3078920-3078985)
chr4 (217-306)||(4550333-4550422)
chr4 (218-303)||(11012141-11012226)
chr4 (212-276)||(16019470-16019535)
chr4 (216-257)||(25476631-25476672)
chr4 (217-306)||(33776796-33776885)
chr4 (219-304)||(34770033-34770117)
chr4 (218-255)||(34995320-34995357)
chr4 (217-262)||(51389101-51389146)
chr4 (218-302)||(23094376-23094460)
chr4 (218-306)||(35017153-35017241)
chr4 (218-302)||(39449173-39449256)
[»] chr3 (31 HSPs)
chr3 (213-306)||(14957831-14957924)
chr3 (217-306)||(41877687-41877776)
chr3 (218-306)||(18169157-18169245)
chr3 (218-306)||(51032607-51032695)
chr3 (218-305)||(49196696-49196783)
chr3 (212-306)||(31017377-31017471)
chr3 (218-304)||(48945847-48945933)
chr3 (221-306)||(40478270-40478355)
chr3 (218-278)||(52963326-52963387)
chr3 (216-276)||(29573368-29573429)
chr3 (213-306)||(32457738-32457831)
chr3 (216-304)||(2482659-2482747)
chr3 (226-306)||(41717458-41717538)
chr3 (218-278)||(51410806-51410866)
chr3 (209-276)||(20380902-20380969)
chr3 (213-276)||(48944723-48944786)
chr3 (218-305)||(55344280-55344367)
chr3 (217-306)||(462384-462473)
chr3 (217-306)||(11327107-11327196)
chr3 (221-310)||(17118400-17118489)
chr3 (226-303)||(27162455-27162532)
chr3 (218-255)||(27936964-27937001)
chr3 (218-303)||(32008033-32008118)
chr3 (215-304)||(38296647-38296736)
chr3 (220-305)||(38471644-38471729)
chr3 (218-306)||(8254027-8254115)
chr3 (217-301)||(26668841-26668925)
chr3 (218-306)||(32981104-32981192)
chr3 (218-306)||(43900740-43900828)
chr3 (218-306)||(44334784-44334872)
chr3 (218-306)||(45295722-45295810)
[»] scaffold0172 (1 HSPs)
scaffold0172 (217-305)||(16974-17062)
[»] chr2 (22 HSPs)
chr2 (218-306)||(27540015-27540103)
chr2 (218-306)||(11980651-11980739)
chr2 (214-276)||(6639485-6639547)
chr2 (214-255)||(7121386-7121427)
chr2 (253-289)||(9051965-9052001)
chr2 (218-306)||(10749662-10749750)
chr2 (214-306)||(28165125-28165217)
chr2 (218-306)||(34262001-34262089)
chr2 (221-305)||(43665625-43665709)
chr2 (218-305)||(1298194-1298281)
chr2 (218-305)||(6851643-6851730)
chr2 (211-305)||(33857210-33857304)
chr2 (216-306)||(38021354-38021444)
chr2 (218-255)||(5031923-5031960)
chr2 (216-305)||(11728105-11728194)
chr2 (217-306)||(12600047-12600136)
chr2 (214-303)||(25094348-25094437)
chr2 (208-276)||(35334510-35334579)
chr2 (218-306)||(4723566-4723654)
chr2 (218-306)||(36132974-36133062)
chr2 (214-266)||(39454262-39454314)
chr2 (218-306)||(44484639-44484727)
[»] chr1 (35 HSPs)
chr1 (218-306)||(18541034-18541122)
chr1 (218-306)||(43196072-43196160)
chr1 (210-301)||(9445100-9445191)
chr1 (217-306)||(37669397-37669486)
chr1 (217-276)||(49020416-49020476)
chr1 (215-306)||(8464496-8464587)
chr1 (219-306)||(15182566-15182653)
chr1 (218-301)||(26501295-26501378)
chr1 (218-304)||(9011645-9011731)
chr1 (218-303)||(8934582-8934667)
chr1 (217-306)||(15061844-15061933)
chr1 (218-306)||(25988967-25989055)
chr1 (218-306)||(42256460-42256548)
chr1 (218-306)||(45042261-45042349)
chr1 (219-306)||(18959005-18959092)
chr1 (211-294)||(39669799-39669882)
chr1 (212-306)||(1788327-1788421)
chr1 (214-304)||(3919296-3919386)
chr1 (218-303)||(21433386-21433472)
chr1 (216-306)||(28253013-28253103)
chr1 (218-255)||(1690446-1690483)
chr1 (208-305)||(30687042-30687139)
chr1 (214-278)||(49931549-49931614)
chr1 (218-303)||(52233207-52233292)
chr1 (217-305)||(5959387-5959475)
chr1 (219-255)||(8959240-8959276)
chr1 (215-251)||(23226484-23226520)
chr1 (218-306)||(26585156-26585244)
chr1 (218-306)||(29632434-29632522)
chr1 (213-305)||(30530558-30530650)
chr1 (218-278)||(42299197-42299257)
chr1 (216-276)||(42615858-42615918)
chr1 (214-270)||(42792296-42792352)
chr1 (218-306)||(43457802-43457890)
chr1 (218-306)||(49425738-49425825)
[»] scaffold0131 (1 HSPs)
scaffold0131 (212-306)||(15517-15611)
[»] chr7 (23 HSPs)
chr7 (218-295)||(40212483-40212560)
chr7 (218-306)||(3344856-3344944)
chr7 (218-306)||(44511139-44511227)
chr7 (218-306)||(48522156-48522244)
chr7 (218-305)||(29609848-29609935)
chr7 (218-303)||(16567316-16567401)
chr7 (218-303)||(16598261-16598346)
chr7 (221-306)||(31436422-31436507)
chr7 (217-306)||(39369301-39369390)
chr7 (217-302)||(42663083-42663168)
chr7 (218-306)||(3341699-3341787)
chr7 (218-306)||(19426580-19426668)
chr7 (216-303)||(33212040-33212127)
chr7 (214-276)||(31365092-31365154)
chr7 (218-276)||(38096452-38096510)
chr7 (217-266)||(23844964-23845013)
chr7 (217-306)||(33050182-33050271)
chr7 (217-301)||(34108842-34108927)
chr7 (217-305)||(2347043-2347131)
chr7 (207-255)||(19880265-19880313)
chr7 (219-278)||(23910261-23910321)
chr7 (218-306)||(33881688-33881776)
chr7 (218-306)||(46148166-46148254)
[»] scaffold0024 (2 HSPs)
scaffold0024 (218-278)||(60469-60529)
scaffold0024 (218-266)||(91948-91996)
[»] scaffold0006 (1 HSPs)
scaffold0006 (218-301)||(278428-278511)
[»] scaffold0508 (1 HSPs)
scaffold0508 (212-306)||(11519-11613)
[»] scaffold0184 (1 HSPs)
scaffold0184 (218-306)||(16577-16665)
[»] scaffold0078 (1 HSPs)
scaffold0078 (218-306)||(56179-56267)
[»] scaffold0019 (1 HSPs)
scaffold0019 (218-306)||(72366-72454)
[»] scaffold0020 (1 HSPs)
scaffold0020 (215-306)||(155903-155994)
[»] scaffold0049 (1 HSPs)
scaffold0049 (218-255)||(72203-72240)
[»] scaffold0514 (1 HSPs)
scaffold0514 (218-306)||(1479-1567)


Alignment Details
Target: scaffold0038 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 24418 - 24304
Alignment:
Q  3 taaatcaaaatcattactggttgtagcaactgatttagtagnnnnnnn---gagagccatgattatagcatatttctcaaatatgctatattttattgac 99  Q
    ||||||||||||||||||| |||||||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24418 taaatcaaaatcattactgattgtagcaactgatttagtagaagaaaaaaagagagccatggttatagcatatttctcaaatatgctatattttattgac 24319  T
Q  100 aacattacattttaa 114  Q
    |||||||||||||||    
T  24318 aacattacattttaa 24304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 28223920 - 28223806
Alignment:
Q  3 taaatcaaaatcattactggttgtagcaactgatttagtagnnnnnnn---gagagccatgattatagcatatttctcaaatatgctatattttattgac 99  Q
    ||||||||||||||||||| |||||||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28223920 taaatcaaaatcattactgattgtagcaactgatttagtagaagaaaaaaagagagccatggttatagcatatttctcaaatatgctatattttattgac 28223821  T
Q  100 aacattacattttaa 114  Q
    |||||||||||||||    
T  28223820 aacattacattttaa 28223806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 32784737 - 32784826
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||  ||||||| |||||||| |||||| ||||||||||||| ||  ||||||||||||| |||||||||||    
T  32784737 tgagaaatgatatttgtacaattattttgttacaactttttgacaactttttctttcatacttatatgatgttattatcctctctcttcc 32784826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 25924936 - 25924847
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||||||||  |||||||| |||||| ||| ||| ||||| |  |||||||||||||||| |||||||||    
T  25924936 tgagaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacatgatgttattattcgctctcttcc 25924847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 28328780 - 28328740
Alignment:
Q  3 taaatcaaaatcattactggttgtagcaactgatttagtag 43  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  28328780 taaatcaaaatcattactggttgtatcaactgatttagtag 28328740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 28506416 - 28506376
Alignment:
Q  3 taaatcaaaatcattactggttgtagcaactgatttagtag 43  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  28506416 taaatcaaaatcattactggttgtatcaactgatttagtag 28506376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 28965911 - 28965824
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| ||||||||||| |||||||| |||||| ||| ||| ||||| |  |||||| |||||||  |||||||||    
T  28965911 gagaaatgatatttgtacaaccattttgttacaactttttgacaactttctctctcatactcacatgatattattatattctctcttc 28965824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 28647507 - 28647418
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||| ||||| | |||| ||| |||||||||| ||| ||||| || ||| || || ||||||||||||||||    
T  28647507 tgagaaatgatatttgtataactattttattacaattttttgacaattttctctctcatacttacattatattcttattctctctcttcc 28647418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 9954548 - 9954636
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| |||||||| |||||| ||| ||| ||||| || ||| ||  | ||||||||||||||||    
T  9954548 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttctctctcatacttacattatcctcttattctctctcttcc 9954636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 11785355 - 11785443
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||| |||| ||| |||||| ||| | | |||||||  ||| || || ||||||||||||||||    
T  11785355 gagaaatgatatttgtacaaccattttgtgacaattttttgacaactttctatctcatattcacattatattcttattctctctcttcc 11785443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 27102112 - 27102167
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttct 270  Q
    |||||||||| ||||||||| ||||||||| ||| || ||| ||||||||||||||    
T  27102112 tttgagaaatgatatttgtacaaccattttctaataattttttgacaattttttct 27102167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 27143934 - 27143989
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttct 270  Q
    |||||||||| ||||||||| ||||||||| ||| || ||| ||||||||||||||    
T  27143934 tttgagaaatgatatttgtacaaccattttctaataattttttgacaattttttct 27143989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 25127904 - 25127867
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  25127904 gagaaatgatatttgtacaaccattttgtaacaacttt 25127867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 1688443 - 1688360
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctc 302  Q
    ||||||||||||||||| |||| ||||||  ||||||| |||||||| | | ||||||| |  ||| ||||| ||||||||||||    
T  1688443 gagaaataatatttgtacaaccgttttgtggcaactttttgacaattctct-tttcatactcacattatgtttttattctctctc 1688360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 3660425 - 3660337
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| ||||| ||||| ||||||||   |||||||||||| ||||| |  ||||||| | ||||  |||||||||    
T  3660425 tgagaaattatatttgtacaaccaatttgtgacaacttttgtacaattttttctctcatactcacatgatggtcttatcttctctcttc 3660337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 15328489 - 15328577
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||  |||||||| | |||| ||| ||| || || |  |||||||||||||| |||| ||||||    
T  15328489 gagaaattatatttgtacaaccattttgctacaactttttaacaactttgtctctcttactcacatgatgttattatcctctttcttcc 15328577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 15722574 - 15722486
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| || |||||||| |||||||| ||||||  || ||| ||||| |  ||| ||  ||||||||||||||||||    
T  15722574 gagaaatgatatttgtacaatcattttgtgacaactttttgacaaccttctctctcatactcacattatagtattattctctctcttcc 15722486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 19789147 - 19789059
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| | |||||||| |||||| ||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  19789147 gagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacattatagtcttattctctctcttcc 19789059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 33656771 - 33656811
Alignment:
Q  213 tttttgagaaataatatttgtaaaaccattttgtaacaact 253  Q
    |||||||||||||||||||||| ||| ||||||| ||||||    
T  33656771 tttttgagaaataatatttgtataactattttgtgacaact 33656811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 43587641 - 43587729
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||  |||||||| |||||||||| ||| ||||| |  ||||||||| ||||||||||||||||    
T  43587641 gagaaatgatatttgtataaccattttgctacaactttttgacaattttctctctcatactcacatgatgttgttattctctctcttcc 43587729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 9048387 - 9048299
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| |||||||||| |||||||||| ||| ||||| |  ||| ||||| ||||||||||| ||||    
T  9048387 gagaaatgatatttgtataaccattttctaacaactttttgacaattttctctctcatactcacattatgtttttattctctcttttcc 9048299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 29509256 - 29509354
Alignment:
Q  208 attattttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||| ||| |||||||| ||||||||| ||||||||||  |||||||| |||||| ||| ||| ||||| |  |||||| ||||||| |||||||||||    
T  29509256 attaatttatgagaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacatgatattattatcctctctcttcc 29509354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 7678732 - 7678820
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||| | ||||||||||||||||||| ||| ||||| |  ||| || || ||||||||||||||||    
T  7678732 gagaaatgatatttgtacaaccactttttgacaactttgtgacaattttctctctcatactcacattatatttttattctctctcttcc 7678820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 21273782 - 21273694
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| ||||||||||| |||||||  |||||||||| ||| ||||| |  ||| ||||| ||||| |||||||||    
T  21273782 tgagaaatgatatttgtacaaccattttgtgacaacttcttgacaattttatctctcatactcacattatgtttttattatctctcttc 21273694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 30943911 - 30943823
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| ||||| ||| |||||||||| |||||||||| ||| | ||| |  ||| |||||||| ||||||||||||    
T  30943911 tgagaaatgatatttgtacaaccaatttttaacaactttttgacaattttctctctaataatcacatcatgttattgttctctctcttc 30943823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 31806296 - 31806387
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||| ||||||||| ||||||||| |||||| ||| |||||| ||| ||| |||||||  ||  || || ||||||||||||||||    
T  31806296 tttgagaaatgatatttgtacaaccattttctaacaattttttgacaactttctctctcatattcacaatatcttcttattctctctcttcc 31806387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 39021514 - 39021427
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| ||||||||||| | |||||| |||||| | | ||||||||| |  ||| ||||| |||||||||||||||    
T  39021514 gagaaatgatatttgtacaaccattttgtgataactttttgacaactctctctttcatactcacattatgtttttattctctctcttc 39021427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 34970201 - 34970295
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||| ||||||| ||||||||| || | ||||||||||||||| |||||| ||| ||| ||||| |  || ||| || ||||||||||||||||    
T  34970201 tttttagagaaatgatatttgtacaatccttttgtaacaactttttgacaactttctctctcatactcacaagatattcttattctctctcttcc 34970295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 6161948 - 6162036
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| | ||||| || |||||| | | ||||||||| |  ||| ||||| ||||||||||||||||    
T  6161948 gagaaatgatatttgtacaaccattttatgacaaccttttgacaactctctctttcatactcacattatgtttttattctctctcttcc 6162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 28927681 - 28927769
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| |||||||| | |||||||||||| ||||| |  ||| ||  | ||||||||||||||||    
T  28927681 gagaaatgatatttgtacaaccactttgtgacaactttttaacaattttttctctcatactcacattattctcttattctctctcttcc 28927769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 37562212 - 37562124
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||| ||| ||| ||||||||  ||||| ||| ||| ||||| | ||||||| || ||||||||||||||||    
T  37562212 gagaaatgatatttgtacaactattatgtgacaacttttagacaactttctctctcatactcgcatgatattcttattctctctcttcc 37562124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 306
Target Start/End: Original strand, 40102015 - 40102111
Alignment:
Q  210 tattttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||| ||||||||| ||||| ||| | |||||||| |||||| ||| ||| ||||| || ||| ||  | ||||||||||||||||    
T  40102015 tatttttagagaaatgatatttgtacaaccactttttcacaactttttgacaactttctctctcatacttacattattctcttattctctctcttcc 40102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 43602494 - 43602406
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||  |||||||| |||||| ||  ||||||| | |  ||||||| ||||||||||||| ||||    
T  43602494 gagaaatgatatttgtacaaccattttgctacaactttttgacaacttgctctttcagactcacatgatggtattattctctcttttcc 43602406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 7559327 - 7559406
Alignment:
Q  227 tatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||| ||||| |||||||  |||||||||| ||| ||||| |  ||| ||||| ||||||||||||||||    
T  7559327 tatttgtacaaccactttgtgacaacttcttgacaattttctctctcatactcacattatgtttttattctctctcttcc 7559406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 10644873 - 10644814
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcata 276  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||| ||| ||| |||||    
T  10644873 gagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcata 10644814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 13884240 - 13884173
Alignment:
Q  209 ttattttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    |||| ||||||||||| ||||||||| || |||||| | ||||||||||||||| ||| ||| |||||    
T  13884240 ttatattttgagaaatgatatttgtacaatcattttttgacaactttgtgacaactttctctctcata 13884173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 13884313 - 13884404
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||  ||||||||| ||| ||||||||||||||||   | || ||||||| ||||| || ||||||||| ||||  ||||||||||    
T  13884313 tttgagaaaagatatttgtacaacgattttgtaacaacttttgaataactttttctctcatacttacatgatgttcttatcatctctcttcc 13884404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 43873768 - 43873681
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctct 299  Q
    |||| |||||||| ||||||||| ||||||||||| |||| ||| |||||| | | ||||||||| |  ||| ||||| |||||||||    
T  43873768 ttttatgagaaatgatatttgtacaaccattttgtgacaattttttgacaactctctctttcatactcacattatgtttttattctct 43873681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 16699639 - 16699581
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    ||||||| ||||||||| |||||||| |||||||||||| ||||| ||| ||| |||||    
T  16699639 gagaaatgatatttgtacaaccatttggtaacaactttgagacaactttctctctcata 16699581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 35937584 - 35937546
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  35937584 tgagaaatgatatttgtacaaccattttgtaacaacttt 35937546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 1332539 - 1332466
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttat 291  Q
    ||||||| ||| ||||| ||||||||| |||||| ||| |||||| ||| |||||||||||  |||||| ||||    
T  1332539 gagaaatgataattgtacaaccattttataacaattttttgacaactttctctttcatattcacatgatattat 1332466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 310
Target Start/End: Complemental strand, 44086584 - 44086491
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcccttt 310  Q
    ||||||| |||||||||||| |||||| | ||||| ||| |||||| | | | ||||||| || ||| ||||| |||||| |||||||||||||    
T  44086584 gagaaatgatatttgtaaaatcattttatgacaacctttttgacaactctctttttcatacttacattatgtttttattccctctcttcccttt 44086491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 5601059 - 5600999
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaacttt-gtgacaattttttctttcata 276  Q
    |||||||| ||||||| | ||||||||| | |||||||| ||||||||||||||| |||||    
T  5601059 tgagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcata 5600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 5639561 - 5639621
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaacttt-gtgacaattttttctttcata 276  Q
    |||||||| ||||||| | ||||||||| | |||||||| ||||||||||||||| |||||    
T  5639561 tgagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcata 5639621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 6849332 - 6849244
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| |||||| || ||||||||||| ||||||||  ||||| ||| ||||||||| |  ||| || || ||| ||||||||||||    
T  6849332 gagaaatgatatttatacaaccattttgtgacaacttttagacaactttatctttcatactcacattatattcttactctctctcttcc 6849244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 8841030 - 8841118
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| | || ||| |||||||||| ||| ||||| || ||| ||  | ||||||||||||||||    
T  8841030 gagaaatgatatttgtacaaccactttgtgagaattttttgacaattttctctatcatacttacattatcatcttattctctctcttcc 8841118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 23587652 - 23587700
Alignment:
Q  246 taacaactttgtgacaattttttctttcatatttgcatgatgttattat 294  Q
    |||||| |||||||||||||||||||| |||||  ||||||||| ||||    
T  23587652 taacaattttgtgacaattttttcttttatattcacatgatgttcttat 23587700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 24116031 - 24116127
Alignment:
Q  209 ttattttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||  ||||||| ||||||||| |  ||||||| ||||| ||| |||||| ||| | | ||||| || ||| ||||| |||||||||||||||    
T  24116031 ttattttaagagaaattatatttgtacattcattttgcaacaattttttgacaactttctttctcatacttacattatgtttttattctctctcttc 24116127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 26294189 - 26294237
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaatttt 266  Q
    ||||||| ||||| ||| ||||||||||| |||||||| ||||||||||    
T  26294189 gagaaatgatattggtacaaccattttgtgacaactttttgacaatttt 26294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 26307446 - 26307494
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaatttt 266  Q
    ||||||| ||||| ||| ||||||||||| |||||||| ||||||||||    
T  26307446 gagaaatgatattggtacaaccattttgtgacaactttttgacaatttt 26307494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 28156203 - 28156291
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||  |||| |||   |||| ||| ||| ||||| || ||| ||||| ||||||||||||||||    
T  28156203 gagaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctctcatacttacattatgtttttattctctctcttcc 28156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 35818937 - 35819025
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||| | ||||||||| |||||| ||| |||||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  35818937 gagaaatgatatttgcacaaccattttctaacaattttttgacaactttctctctcatactcacattatctttttattctctctcttcc 35819025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 12718455 - 12718363
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||| ||||||||| ||||| ||||| |||||||| |||||| ||| ||| |||||||  ||| ||||| ||||||||||||||||    
T  12718455 ttttgagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatattcacattatgtttttattctctctcttcc 12718363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 36548456 - 36548363
Alignment:
Q  213 tttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||| ||||||| ||||||||| ||||||||||| |||||||| |||||| ||| ||| ||||| |  ||||||| |||||| |||||||||||    
T  36548456 ttttagagaaatgatatttgtataaccattttgtgacaactttctgacaactttctctctcatactcacatgatgctattatcctctctcttcc 36548363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 12779681 - 12779589
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||| ||||||||| ||||| ||||| |||||||| |||||| ||| ||| ||||| |  ||| ||||| ||||||||||||||||    
T  12779681 ttttgagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatactcacattatgtttttattctctctcttcc 12779589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 42225841 - 42225800
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  42225841 ttttgagaaatgatatttgtaaaaccattttgtaacaacttt 42225800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 22920564 - 22920476
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||||||||||||| |||||||||||||||| |||  ||||| ||| ||| ||||| |  ||||||||| ||||  |||||||||    
T  22920564 tgagaaataatatttgtacaaccattttgtaacaaattttggacaactttctctctcatactcacatgatgttcttatcatctctcttc 22920476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 9168236 - 9168177
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcata 276  Q
    ||||||||||||||||| ||||||||  ||||||| |||||||||||||| |||||||||    
T  9168236 gagaaataatatttgtacaaccatttcctaacaacttttgtgacaattttctctttcata 9168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 9939512 - 9939442
Alignment:
Q  209 ttattttttgagaaataatatttgtaaaaccattttgtaacaa-ctttgtgacaattttttctttcatatt 278  Q
    |||||||||||||||| |||||| ||  |||||||||||||||  |||||||||||||| ||| |||||||    
T  9939512 ttattttttgagaaatgatatttatactaccattttgtaacaagttttgtgacaattttctctctcatatt 9939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 31006057 - 31006147
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||| |||||||||  || ||||||  | |||||| |||||| ||| ||| ||||| || |||||||||||||| |||||||||||    
T  31006057 ttgagaaatgatatttgtacgactattttgctaaaactttttgacaactttctctctcatacttacatgatgttattatcctctctcttcc 31006147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 18695312 - 18695377
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcata 276  Q
    ||||| ||||||| ||||||||| ||||||||||||||||| |||||||||| ||| ||| |||||    
T  18695312 tttttagagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcata 18695377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 3263581 - 3263493
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||||| ||||||||| ||||| ||||| ||||||||   |||||||||||| ||||| |  ||||||| | |||| |||||||||    
T  3263581 ttgagaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttttctctcatactcacatgatggtcttatcctctctctt 3263493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 10372270 - 10372230
Alignment:
Q  261 aattttttctttcatatttgcatgatgttattattctctct 301  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  10372270 aattttctctttcatatttacatgatgttattattctctct 10372230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 19271859 - 19271947
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||||||||| ||  ||||| ||| ||| ||||| |  ||||||||| |||| || ||||||||    
T  19271859 gagaaatgatatttgtacaaccattttgtaacaacgtttagacaactttctctctcatactcacatgatgttcttatcctttctcttcc 19271947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 35972569 - 35972657
Alignment:
Q  213 tttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctct 301  Q
    |||||| ||||| ||||||||| || |||||||| |||  ||| |||||||||| ||| | ||| |  |||||||||||||||||||||    
T  35972569 tttttgtgaaatgatatttgtacaatcattttgttacatttttttgacaattttctctcttatactcacatgatgttattattctctct 35972657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 36572691 - 36572775
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctc 302  Q
    ||||||| ||||||||| ||| ||||||| |||||||| |||||| | | ||||||||| |  ||| ||||| ||||||||||||    
T  36572691 gagaaatgatatttgtataactattttgtgacaactttttgacaactctctctttcatactcacattatgtttttattctctctc 36572775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 14914372 - 14914443
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgtt 289  Q
    ||||||| ||||||||| ||||||||||| ||||||||  ||||| ||| |||| ||||||  |||||||||    
T  14914372 gagaaatgatatttgtacaaccattttgtgacaacttttggacaactttctcttacatattcacatgatgtt 14914443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 34381009 - 34381100
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||| ||||||||| ||||| ||||| |||||||| |||||| ||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  34381009 tttgagaaatgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatactcacattattctcttattctctctcttcc 34381100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 15622038 - 15622080
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactt 254  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||    
T  15622038 ttttttgagaaataatatttgtataaccaatttgtgacaactt 15622080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 15639383 - 15639473
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||| ||||||||| |||||||| || ||||||||  ||||| ||||||| ||||| |  ||| || || ||| ||||||||||||    
T  15639383 ttgagaaatgatatttgtacaaccatttggtgacaacttttagacaactttttctctcatactcacattatattcttactctctctcttcc 15639473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 19952008 - 19952050
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgt 257  Q
    |||||||||| ||||||||||||||||||||| |||| |||||    
T  19952008 tttgagaaatgatatttgtaaaaccattttgtgacaaatttgt 19952050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 31748327 - 31748389
Alignment:
Q  209 ttattttttgagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttct 270  Q
    |||||||||||||||| ||||||||| ||| ||||| | ||||| |||||||||| |||||||    
T  31748327 ttattttttgagaaatgatatttgtacaactatttttttacaacttttgtgacaactttttct 31748389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 38500943 - 38501001
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    ||||||| ||||||||| ||||||||||| |||| ||| |||||| ||| |||||||||    
T  38500943 gagaaatgatatttgtacaaccattttgtgacaattttttgacaactttctctttcata 38501001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 19127123 - 19127212
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||| ||||| |||||||  |||||| | | ||| ||||| |  ||| ||||| ||||||||||||||||    
T  19127123 tgagaaatgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatactcacattatgtttttattctctctcttcc 19127212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 6529013 - 6529077
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    ||||||||||||| ||||||||| ||  ||||| |||||| ||| |||||| ||||||| |||||    
T  6529013 ttttttgagaaatgatatttgtacaattattttctaacaattttttgacaactttttctctcata 6529077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 26660482 - 26660394
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| | ||||||||| |||||||  |||||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  26660482 gagaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactcacattatatttttattctctctcttcc 26660394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 26932074 - 26931986
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| | ||||||||| |||||||  |||||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  26932074 gagaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactcacattatatttttattctctctcttcc 26931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 32053791 - 32053839
Alignment:
Q  258 gacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||| ||||||| || ||| ||||| ||||||||||||||||    
T  32053791 gacaattttttatttcatacttacattatgtttttattctctctcttcc 32053839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 39840780 - 39840692
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||||||||| ||||| ||| | |||||||| |||||| ||| ||| ||||| |  ||| || || ||||||||| ||||||    
T  39840780 gagaaataatatttgtacaaccactttattacaactttttgacaaatttctctctcatactcacattatattcttattctctttcttcc 39840692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 40829413 - 40829473
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaacttt-gtgacaattttttctttcata 276  Q
    |||||||| ||||||||| ||||||||| ||| || ||| ||||||||||||||| |||||    
T  40829413 tgagaaatgatatttgtacaaccattttttaataatttttgtgacaattttttctctcata 40829473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Original strand, 47998588 - 47998682
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||| |||||| ||||||| ||||| ||  || ||  | ||||||||||||||||    
T  47998588 tttttagagaaatgatatttgtacaaccattttgtaacaactttttgacaactttttctctcatacttatattattctcttattctctctcttcc 47998682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 25725767 - 25725679
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||||| ||||||||| ||||| ||| |||||||||| |||||| ||| ||||||||| |  ||| ||||| ||||||||||||||    
T  25725767 ttgagaaatgatatttgtacaaccactttctaacaactttttgacaactttctctttcatactcacattatgtttttattctctctctt 25725679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 51224911 - 51224823
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||||| ||||||||| ||||||||||  |||||||| |||||| ||| ||| ||||| |  |||||||||||||| |||||||||    
T  51224911 ttgagaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacatgatgttattatcctctctctt 51224823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 45548854 - 45548767
Alignment:
Q  219 agaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||| ||||||||| ||||||||||| | || ||| |||||| ||||||||||||| |  |||||||| ||||| |||||||||||    
T  45548854 agaaatgatatttgtacaaccattttgtgataattttttgacaactttttctttcatactcacatgatgtcattatcctctctcttcc 45548767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 48722069 - 48722156
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| | |||||||| ||||||||| |||||||||| ||| ||||| |  ||| ||||| |||||||||||||||    
T  48722069 gagaaatgatatttgtacatccattttgcaacaactttttgacaattttctctctcatactcacattatgtttttattctctctcttc 48722156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 20956659 - 20956567
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||||||||||||||||||| |||||||||   |||| ||| ||| || ||| ||| |||| ||  ||||||||||||||||| ||||||    
T  20956659 ttttttgagaaataatatttgtacaaccattttactacaattttttgataactttctctctcatgttcacatgatgttattattctttctctt 20956567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 53662499 - 53662412
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| ||| |||||||||||| |||   |||| ||| ||| |||||||  ||||||||| |||||||||||||||    
T  53662499 gagaaatgatatttgtacaactattttgtaacaatttttgtacaactttctctctcatattcacatgatgttcttattctctctcttc 53662412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 43759219 - 43759161
Alignment:
Q  221 aaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatattt 279  Q
    |||||||||||||| ||||||||| |||||| ||| |||||| ||| ||||||||||||    
T  43759219 aaataatatttgtacaaccattttctaacaattttttgacaactttctctttcatattt 43759161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 55996419 - 55996509
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||||| ||||||||| || |||||| |||||| ||| |||||||||| ||| ||||| |  ||| || || |||||||||||||||    
T  55996419 tttgagaaatgatatttgtacaatcattttctaacaattttttgacaattttctctctcatactcacattatcttcttattctctctcttc 55996509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 54165232 - 54165147
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||||| |||||||||   |||| ||| |||||| ||||||| ||||| |  |||||||||||||| ||||||||    
T  54165232 gagaaatgatatttgtacaaccattttactacaattttttgacaactttttctctcatactcacatgatgttattatcctctctct 54165147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 55960699 - 55960788
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||||||||  | ||||||   |||||||| ||| ||||| | |||| ||||| ||||||||||||||||    
T  55960699 tgagaaatgatatttgtataaccattttggtataacttttgtacaattttctctctcatactcgcattatgtttttattctctctcttcc 55960788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 169573 - 169525
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaatttt 266  Q
    ||||||| ||||||||| ||||||||||| |||||||| ||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactttttgacaatttt 169525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 6290462 - 6290545
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctc 302  Q
    ||||||| ||||||||| ||| |||||||||||||||  |||||| | | ||||||||| || ||| ||||| ||||||||||||    
T  6290462 gagaaatgatatttgtacaactattttgtaacaacttcttgacaa-tctctctttcatacttacattatgtttttattctctctc 6290545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 9162066 - 9162154
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| || |||||||| |||||||| |||||||||| ||| | ||| | |||| ||  | ||||||||||||||||    
T  9162066 gagaaatgatatttgtacaatcattttgtgacaactttttgacaattttctctctaatactcgcattattctcttattctctctcttcc 9162154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 12241058 - 12241146
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||| ||||| |||||||||| |||||| ||| ||| ||||| |  ||| ||||| ||||||||||| ||||    
T  12241058 gagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattatgtttttattctctcttttcc 12241146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 30042133 - 30042221
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| ||||||||||| |||||||  | |||||||| ||| | ||| |  ||| ||||| |||||||||||||||    
T  30042133 tgagaaatgatatttgtacaaccattttgtgacaacttcttaacaattttctctcttatactaacattatgtttttattctctctcttc 30042221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 33820407 - 33820319
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||| ||||| |||||||||| |||||| ||| ||| ||||| |  ||| ||||| ||||||||||| ||||    
T  33820407 gagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattatgtttttattctctcttttcc 33820319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 35037609 - 35037697
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||  ||||||||   ||||| || ||| |||||||  ||| ||||| ||||||||||||||||    
T  35037609 gagaaatgatatttgtacaaccattttgatacaacttttgtacaatattctctctcatattcacattatgtttttattctctctcttcc 35037697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 39881102 - 39881014
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| || |||||| |||||||||| |||||| ||| ||| ||||| |  ||| || || |||||||||||||||    
T  39881102 tgagaaatgatatttgtacaatcattttctaacaactttttgacaactttctctctcatactcacattatcttcttattctctctcttc 39881014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 40755921 - 40756009
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| |||||| ||| ||| |||||| ||| ||||| |  ||| || || ||||||||||||||||    
T  40755921 gagaaatgatatttgtacaaccattttctaacaattttttgataattttctctctcatactcacattatcttcttattctctctcttcc 40756009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 44170690 - 44170602
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||| | || ||| |||||| ||| |||  |||| ||  ||||||||||||| |||||||||||    
T  44170690 gagaaatgatatttgtacaaccattttgttataattttttgacaactttctctcacatacttatatgatgttattatcctctctcttcc 44170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 49424891 - 49424803
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| |||| ||||||||||||||| |||||| ||| ||| ||||| |  ||  || || ||||||||||||||||    
T  49424891 gagaaatgatatttgtacaacctttttgtaacaactttttgacaactttctctctcatactcacaatattttcttattctctctcttcc 49424803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 51318703 - 51318791
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| | |||||| ||||||||| |||| ||||| |  ||| ||  ||||||||||||||||||    
T  51318703 gagaaatgatatttgtacaaccactttgtgataactttttgacaatttcttctatcatactcacattattatattattctctctcttcc 51318791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 15596393 - 15596484
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||| ||||||||| ||||| ||||| |||||||  |||||| | | ||| ||||| |  ||| ||||| ||||||||||||||||    
T  15596393 tttgagaaatgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatactcacattatgtttttattctctctcttcc 15596484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Complemental strand, 39010210 - 39010120
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||| ||||||||| ||||||||||| |||||||| |||||  ||| ||| ||||| |   |||||||| ||||  ||||||||||    
T  39010210 ttgagaaatgatatttgtacaaccattttgtgacaactttttgacagctttctctctcatactcaaatgatgttcttatcatctctcttcc 39010120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 45923412 - 45923465
Alignment:
Q  250 aactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    |||||| |||||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  45923412 aactttttgacaattttctctctcatatttacat-atgttattattctctctctt 45923465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 304
Target Start/End: Original strand, 1031752 - 1031841
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    |||||||||| ||||||||| ||||| ||||| | |||||  |||||| ||| ||| ||||| |  ||| ||||| ||||||||||||||    
T  1031752 tttgagaaatgatatttgtacaaccactttgtgataacttcttgacaactttctctctcatactcacattatgtttttattctctctctt 1031841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 3078985 - 3078920
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcata 276  Q
    |||| |||||||| ||||||||| || |||||||||||||| |||||||||| ||| ||| |||||    
T  3078985 ttttatgagaaatgatatttgtacaatcattttgtaacaacttttgtgacaactttctctctcata 3078920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 4550333 - 4550422
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| || |||||||  |||||||| | |||| ||| |||  |||| ||  ||||||||||||| |||||||||||    
T  4550333 tgagaaatgatatttgtacaatcattttgctacaactttttaacaactttctctcccatacttatatgatgttattatcctctctcttcc 4550422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 11012141 - 11012226
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||||| ||||||||| | |||||||| | |||| ||| ||| ||||| || ||| || || |||||||||||||    
T  11012141 gagaaatgatatttgtacaaccattttatgacaactttttaacaactttatctctcatacttacattatatttttattctctctct 11012226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 16019470 - 16019535
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttg-tgacaattttttctttcata 276  Q
    |||| ||| |||| ||||||||| || |||||| ||||||||||  ||||||||||||||||||||    
T  16019470 ttttatgaaaaatgatatttgtacaatcattttctaacaacttttatgacaattttttctttcata 16019535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 25476631 - 25476672
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgt 257  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||    
T  25476631 ttgagaaattatatttgtagaaccattttgtgacaactttgt 25476672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 33776885 - 33776796
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||||||| ||||||| || ||  || ||||||| | ||| || ||| || || ||||||||||||||||    
T  33776885 tgagaaatgatatttgtacaaccattttctaacaaccttttggtaactttttctctaatacttacatcatatttttattctctctcttcc 33776796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 34770033 - 34770117
Alignment:
Q  219 agaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    |||||| ||||||||| ||||||||| | |||  ||| | |||||||| ||| |||||||| ||||||||||||||| | ||||||    
T  34770033 agaaatgatatttgtacaaccattttattacattttt-taacaattttctctctcatatttacatgatgttattattttttctctt 34770117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 34995320 - 34995357
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  34995320 gagaaattatatttgtacaaccattttgtaacaacttt 34995357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 51389146 - 51389101
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaa 262  Q
    |||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  51389146 tgagaaatgatatttgtacaaccactttgtaacaactttttgacaa 51389101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 23094376 - 23094460
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctc 302  Q
    ||||||| ||||||||| || |||||||| | ||||||  ||||| ||| |||||||||||| ||| || || ||| ||||||||    
T  23094376 gagaaatgatatttgtacaatcattttgtgataacttttagacaactttctctttcatatttacattatattcttactctctctc 23094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 35017153 - 35017241
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||| ||||||| |||||||| | |||| ||| ||| ||||| |  ||| ||  ||||||||||||||||||    
T  35017153 gagaaatgatatttgtacaactattttgtgacaacttttttacaactttatctctcatactaacattatactattattctctctcttcc 35017241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 39449173 - 39449256
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctc 302  Q
    ||||||| |||||| || ||| ||||||| | |||||| |||||||||||||| ||||| |  ||| ||||| ||||||||||||    
T  39449173 gagaaatgatatttatacaactattttgtgataacttt-tgacaattttttctctcatactcacatcatgttcttattctctctc 39449256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 14957831 - 14957924
Alignment:
Q  213 tttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||||| ||||||||| ||||| ||||| |||||||| | |||||||||||| |||||||  ||| ||  | ||||||||||||||||    
T  14957831 tttttgagaaatgatatttgtacaaccactttgtgacaactttttaacaattttttctctcatattcacattatactcttattctctctcttcc 14957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 41877687 - 41877776
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||||||||  |||||||| |||||| ||| ||| ||||| |  |||||||||||||| |||||||||||    
T  41877687 tgagaaatgatatttgtacaaccattttgctacaactttttgacaactttctctctcatactcacatgatgttattatcctctctcttcc 41877776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 18169157 - 18169245
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| |||||||| |||||| ||| ||| |||||||||||| ||  | ||||||||||||||||    
T  18169157 gagaaatgatatttgtacaaccactttgtgacaactttttgacaaatttctctctcatatttgcattattctcttattctctctcttcc 18169245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 51032695 - 51032607
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| |||||||||| |||||||||| ||| ||||| |  ||| || || ||||||||||||||||    
T  51032695 gagaaatgatatttgtacaaccattttctaacaactttttgacaattttctctctcatactcacattatcttcttattctctctcttcc 51032607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 49196696 - 49196783
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |  ||| ||  | |||||||||||||||    
T  49196696 gagaaatgatatttgtacaaccattttgtgacaactttgtgacaattttctctctcatactcacattatactcttattctctctcttc 49196783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 31017471 - 31017377
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||||| ||||||||| || |||||| |||||||||| |||||||||| ||| ||||| |  | | || || ||||||||||||||||    
T  31017471 ttttttgagaaatgatatttgtacaatcattttctaacaactttttgacaattttctctctcatactcacgttatcttcttattctctctcttcc 31017377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 48945847 - 48945933
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||| ||||||||| ||||| ||||| |||||||  |||||||||||||| |||||||  ||| ||||| |||||| |||||||    
T  48945847 gagaaatgatatttgtacaaccactttgtgacaacttcttgacaattttttctctcatattcacattatgtttttattccctctctt 48945933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 306
Target Start/End: Complemental strand, 40478355 - 40478270
Alignment:
Q  221 aaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||| ||||||||| ||||||||||  |||||||| |||||| ||| | | |||||||  |||||||||||||| |||||||||||    
T  40478355 aaatgatatttgtacaaccattttgctacaactttttgacaactttctatctcatattcacatgatgttattatcctctctcttcc 40478270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 52963387 - 52963326
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaacttt-gtgacaattttttctttcatatt 278  Q
    ||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||    
T  52963387 gagaaatgatatttgtacaaccattttttaacaacttttgtgacaattttttctctcatatt 52963326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 29573429 - 29573368
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcata 276  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||| ||| ||| |||||    
T  29573429 ttgagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcata 29573368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 32457831 - 32457738
Alignment:
Q  213 tttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||||| ||||||||| ||||| ||| | ||||||||||||||| ||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  32457831 tttttgagaaatgatatttgtacaaccactttttgacaactttgtgacaactttctctctcatactcacattatactcttattctctctcttcc 32457738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 2482747 - 2482659
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||||| ||||||||| | ||||||||| ||||||||   |||| ||| ||| ||||| |  ||||||||| ||||||||||||||    
T  2482747 ttgagaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctctcataatcacatgatgttgttattctctctctt 2482659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 41717458 - 41717538
Alignment:
Q  226 atatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||| ||||||||| | |||||||| |||||| | | ||||||||| |  ||| ||||| ||||||||||||||||    
T  41717458 atatttgtataaccattttatgacaactttttgacaactctctctttcatactcacattatgtttttattctctctcttcc 41717538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 51410806 - 51410866
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatt 278  Q
    ||||||| ||||||||| ||||| ||| | |||||||| |||||||||| |||||||||||    
T  51410806 gagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctttcatatt 51410866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 20380969 - 20380902
Alignment:
Q  209 ttattttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    |||||||||||||||| ||||||||| ||||| ||||| |||||||  |||||| ||| ||| |||||    
T  20380969 ttattttttgagaaatgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcata 20380902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 48944786 - 48944723
Alignment:
Q  213 tttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||   |||||||| ||| |||||    
T  48944786 tttttgagaaatgatatttgtacaaccattttctaacaacttttgtacaattttctctctcata 48944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 55344367 - 55344280
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| ||||||||||| | |||||  |||||||||| ||||||||| | |||| || || ||||  |||||||||    
T  55344367 gagaaatgatatttgtacaaccattttgtgataacttcttgacaattttctctttcatactcgcattatatttttatcatctctcttc 55344280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 462473 - 462384
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||||||||| ||||||||  ||||| ||| ||| ||||| |  | | || || ||||||||||||||||    
T  462473 tgagaaatgatatttgtacaaccattttgtgacaacttttagacaactttctctctcatactcacgttatattcttattctctctcttcc 462384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 11327107 - 11327196
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||||||||| ||||||||   |||| ||| ||| ||||| |  ||||||| | |||| |||||||||||    
T  11327107 tgagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacatgatggtcttatcctctctcttcc 11327196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 17118400 - 17118489
Alignment:
Q  221 aaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcccttt 310  Q
    |||| ||||||||| |||||||||   ||||||||   |||||||||||| ||||| |  ||| || ||||||||||||||||| |||||    
T  17118400 aaatgatatttgtacaaccatttttgtacaacttttgtacaattttttctctcatactcacattatcttattattctctctctttccttt 17118489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 27162532 - 27162455
Alignment:
Q  226 atatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||||| ||||||||||||||||||||   |||| ||| ||| ||||| |  ||||||||| |||| ||||||||    
T  27162532 atatttgtacaaccattttgtaacaacttttgaacaactttctctctcatactcacatgatgttgttatcctctctct 27162455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 27936964 - 27937001
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  27936964 gagaaataatatttgtagaaccattttgtgacaacttt 27937001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 32008033 - 32008118
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||| | ||||| ||| |||||||||| |||||| ||| ||| ||||| | |||| || || |||||||||||||    
T  32008033 gagaaatgatatttgcacaaccaatttctaacaactttttgacaactttctctctcatactcgcattatattcttattctctctct 32008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 304
Target Start/End: Complemental strand, 38296736 - 38296647
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    |||||||||||||||||||| |||||||||   ||||||||   |||||||| ||| |||||||   || ||||| ||||| ||||||||    
T  38296736 tttgagaaataatatttgtacaaccattttagtacaacttttgtacaattttctctctcatattcatattatgtttttattttctctctt 38296647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 38471644 - 38471729
Alignment:
Q  220 gaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||| ||||||||| ||||||||||  ||||||||   |||||||| ||| ||||| |  ||| ||||| |||||||||||||||    
T  38471644 gaaatgatatttgtacaaccattttggtacaacttttgtacaattttctctctcatactcacattatgtttttattctctctcttc 38471729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 8254027 - 8254115
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||| |||||||||  |||| ||| ||| ||||| |  ||||||| | ||||  ||||||||||    
T  8254027 gagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgatggtcttatcatctctcttcc 8254115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 26668841 - 26668925
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctct 301  Q
    |||||||||||||||||| || |||||| | | |||| | |||||| ||||| |||||||||  ||| || || |||||||||||    
T  26668841 tgagaaataatatttgtacaatcattttattataactctttgacaactttttttttcatattcacattatattcttattctctct 26668925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 32981192 - 32981104
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| |||||||| || ||||||||  ||||| ||| ||| ||||| |  ||| || |||||| ||||||||||||    
T  32981192 gagaaattatatttgtacaaccatttagtgacaacttttagacaactttctctctcatactcacattatattattactctctctcttcc 32981104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 43900828 - 43900740
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||| | |||||||| |||||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  43900828 gagaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatattcttattctctctcttcc 43900740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 44334872 - 44334784
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||| | |||||||| |||||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  44334872 gagaaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatatttttattctctctcttcc 44334784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 45295810 - 45295722
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||   ||||||| | |||| | | ||| ||||| |  |||||||||||||| |||||||||||    
T  45295810 gagaaattatatttgtacaaccattttgctgcaactttttaacaactatctctctcatactcacatgatgttattatcctctctcttcc 45295722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 16974 - 17062
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| |||||||||   |||||||| |||||| ||| ||| ||||| |  |||||||||||||||||||||||||    
T  16974 tgagaaatgatatttgtacaaccattttactacaactttttgacaactttctctctcatactcacatgatgttattattctctctcttc 17062  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 27540015 - 27540103
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||| ||||||  |||||||| |||||| ||||||| ||||| |  |||||||||||||| |||||||||||    
T  27540015 gagaaatcatatttgtacaacaattttgctacaactttttgacaactttttctctcatactcacatgatgttattatcctctctcttcc 27540103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 11980651 - 11980739
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| |||||||||| |||||| ||||| | ||||| |  ||| || || ||||||||||||||||    
T  11980651 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttttatctcatactcacattatcttcttattctctctcttcc 11980739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 6639547 - 6639485
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    ||||||||||||||||||||| ||||||||| |||||||||| | |||| ||| ||| |||||    
T  6639547 ttttgagaaataatatttgtacaaccattttctaacaactttttaacaactttctctctcata 6639485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 7121386 - 7121427
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  7121386 ttttgagaaatgatatttgtataaccattttgtaacaacttt 7121427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 9051965 - 9052001
Alignment:
Q  253 tttgtgacaattttttctttcatatttgcatgatgtt 289  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9051965 tttgtgacaattttttctttcatatttgcattatgtt 9052001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 10749750 - 10749662
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| | ||||  || |||||||| | ||||||||| |  ||| ||||| ||||||||||||||||    
T  10749750 gagaaatgatatttgtacaaccattttatgacaatcttttgacaattctctctttcatactcacattatgtttttattctctctcttcc 10749662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 28165125 - 28165217
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||| ||| ||||| ||||||||||| ||||||||  ||||||||| ||| ||||| |  ||| || || ||| ||||||||||||    
T  28165125 ttttgagaaatgatacttgtacaaccattttgtgacaacttttagacaattttctctctcatactcacattatattcttaatctctctcttcc 28165217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 34262089 - 34262001
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||||||||| ||||||||| | ||||| || ||| || ||||||| ||||| |  ||| || || ||||||||||||||||    
T  34262089 gagaaataatatttgtacaaccattttattacaaccttttgataactttttctctcatactcacattatatttttattctctctcttcc 34262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 43665625 - 43665709
Alignment:
Q  221 aaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||| ||||||||| ||||| ||| |||||||||| |||||||||||||| ||||| |  ||| ||  | |||||||||||||||    
T  43665625 aaatgatatttgtacaaccactttttaacaactttttgacaattttttctctcatactcacattatacttttattctctctcttc 43665709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 1298194 - 1298281
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| ||||||||||  | || ||| |||||||||| ||| ||||| ||  ||||||||||||| | ||||||||    
T  1298194 gagaaatgatatttgtagaaccattttgctataattttttgacaattttctctctcatacttatatgatgttattatcccctctcttc 1298281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 6851730 - 6851643
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| | | ||||||  |||||||| |||||| ||| ||| ||||| |  ||||||||| |||||||||||||||    
T  6851730 gagaaatgatatttgtacatctattttgctacaactttttgacaactttctctctcatactcacatgatgttgttattctctctcttc 6851643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 33857210 - 33857304
Alignment:
Q  211 attttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||| ||||||||| ||||||||| || | |||| |||||| ||| |||||| ||| ||| ||||| |  |||||| || |||||||||||||||    
T  33857210 atttgttgagaaatgatatttgtacaatctttttctaacaattttttgacaactttctctctcatactcacatgatattcttattctctctcttc 33857304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 38021354 - 38021444
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||| ||||||||| ||| |||||   | || ||| |||||| ||| | | ||||| || ||||||||||||||||||||||||||    
T  38021354 ttgagaaatgatatttgtacaactattttagtataattttttgacaactttctttctcatacttacatgatgttattattctctctcttcc 38021444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 5031923 - 5031960
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  5031923 gagaaatgatatttgtacaaccattttgtaacaacttt 5031960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 305
Target Start/End: Complemental strand, 11728194 - 11728105
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||||| || |||||| ||||||||||  ||||||||   |||| ||| ||||||||| |  ||| ||||| |||||||||||||||    
T  11728194 ttgagaaatgatgtttgtacaaccattttggtacaacttttgtacaactttctctttcatactcacattatgtttttattctctctcttc 11728105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 12600047 - 12600136
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||| ||||| | || |||||||||| ||| ||| ||||| |  ||| ||  ||||||||||||||||||    
T  12600047 tgagaaatgatatttgtacaaccactttgtgataattttgtgacaactttctctctcatactcacattatactattattctctctcttcc 12600136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 25094348 - 25094437
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||||||| ||||||||| ||||||||||  |||| |||   |||| ||| ||| |||||||  ||| ||||| |||||||||||||    
T  25094348 ttttgagaaatgatatttgtataaccattttggtacaatttttgtacaactttctctctcatattcacattatgtttttattctctctct 25094437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 35334510 - 35334579
Alignment:
Q  208 attattttttgagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcata 276  Q
    |||| |||||||||||| ||||||||| ||||||||| ||| ||| ||||| |||||| ||||| |||||    
T  35334510 attagtttttgagaaatgatatttgtacaaccattttataataacttttgtaacaattctttctctcata 35334579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 4723566 - 4723654
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| |||| |||| ||||||||| |||||||||| | |||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  4723566 gagaaatgatatatgtacaaccattttttaacaacttttttacaactttctctctcatactcacattatcttcttattctctctcttcc 4723654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 36132974 - 36133062
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| |||| |||||||||| ||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  36132974 gagaaatgatatttgtacaaccactttgtgacaattttgtgacaactttatctctcatactcacattatactcttattctctctcttcc 36133062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 39454314 - 39454262
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaatttt 266  Q
    |||||| |||| ||||||||| ||||||||||| |||||||| ||| ||||||    
T  39454314 ttttgaaaaatgatatttgtataaccattttgtgacaactttttgataatttt 39454262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 44484727 - 44484639
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| |||||||||||||||| |||   |||| ||| ||| ||||| |  ||||||||| ||||  ||||||||||    
T  44484727 gagaaatgatatttgtacaaccattttgtaacaatttttgtacaactttctctctcatactcacatgatgttcttatcatctctcttcc 44484639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 18541122 - 18541034
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| |||||||||| |||||| ||| ||| |||||||  ||| || || ||||||||||||||||    
T  18541122 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatattcacattatcttcttattctctctcttcc 18541034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 43196160 - 43196072
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| | ||||||||  |||||||| |||||||||| ||| ||||| |  ||||||||| ||||||||||||||||    
T  43196160 gagaaatgatatttgtacatccattttgctacaactttttgacaattttctctctcatactcacatgatgttgttattctctctcttcc 43196072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 9445100 - 9445191
Alignment:
Q  210 tattttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctct 301  Q
    |||||| |||||||| ||||| ||| |||||||||||||||||||| |||||| ||| ||||||||| |  ||| ||||| | |||||||||    
T  9445100 tattttatgagaaatgatattcgtacaaccattttgtaacaactttttgacaactttctctttcatactcacattatgttttcattctctct 9445191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 37669397 - 37669486
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| || |||||||  |||||||| | |||| ||| ||| |||||||  |||||||||||||| |||||||||||    
T  37669397 tgagaaatgatatttgtacaatcattttgatacaactttttaacaaatttctctctcatattcacatgatgttattatcctctctcttcc 37669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 49020476 - 49020416
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaacttt-gtgacaattttttctttcata 276  Q
    |||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||| |||||    
T  49020476 tgagaaatgatatttgtacaaccattttttaacaacttttgtgacaattttttctctcata 49020416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 8464587 - 8464496
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||| ||||||||| ||||| ||| | |||||||| |||||||||| ||| ||||| |  ||| || || ||||||||||||||||    
T  8464587 tttgagaaatgatatttgtacaaccactttattacaactttttgacaattttctctctcatactcacattatattcttattctctctcttcc 8464496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 15182653 - 15182566
Alignment:
Q  219 agaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||| ||||||||| ||| ||||| |||||||||| ||||||| |||||||||||| |  ||| ||||  |||||||| |||||||    
T  15182653 agaaatgatatttgtacaactattttctaacaactttttgacaatattttctttcatactcacattatgtatttattctcgctcttcc 15182566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 26501295 - 26501378
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctct 301  Q
    ||||||| ||||||||| ||||||||||||| ||||||  ||||| ||| ||| ||||| || ||||||||| |||| ||||||    
T  26501295 gagaaatgatatttgtacaaccattttgtaataacttttggacaactttctctctcatacttacatgatgttcttatcctctct 26501378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 304
Target Start/End: Original strand, 9011645 - 9011731
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||| ||||||||| ||||||||||| |||||||||  |||| ||| ||| ||||||||  |||||| | |||| |||||||||    
T  9011645 gagaaatgatatttgtacaaccattttgtgacaactttgatacaactttctctctcatatttatatgatggtcttatcctctctctt 9011731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 8934667 - 8934582
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||||| ||| ||||||| |||||||| |||||| | ||||| ||||| ||  || ||||| |||||||||||||    
T  8934667 gagaaattatatttgtacaactattttgtgacaactttttgacaactatttctctcatacttaaataatgttcttattctctctct 8934582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 15061844 - 15061933
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||| ||||| |||||||| |||||||||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  15061844 tgagaaatgatatttgtataaccactttgtgacaactttttgacaattttctctctcatactcacattatcatcttattctctctcttcc 15061933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 25989055 - 25988967
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| ||||||||||  ||||||||| ||| ||||| |  ||| || || ||| ||||||||||||    
T  25989055 gagaaatgatatttgtacaaccattttttaacaacttttagacaattttctctctcatactcacattatattcttactctctctcttcc 25988967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 42256460 - 42256548
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||| |||||||||  |||| ||| ||| ||||| |  ||||||| | |||| |||||||||||    
T  42256460 gagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgatggtcttatcctctctcttcc 42256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 45042261 - 45042349
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||| ||||| |||||| ||| |||||||||||||| ||||| |  ||| ||  | ||||||||||||||||    
T  45042261 gagaaatgatatttgtacaactattttctaacaattttttgacaattttttctctcatactcacattatactcttattctctctcttcc 45042349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 18959005 - 18959092
Alignment:
Q  219 agaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||| |||||| || ||||||||||| |||||||| |||||||||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  18959005 agaaatgatatttatacaaccattttgttacaactttttgacaattttctctctcatactcacattattatcttattctctctcttcc 18959092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 294
Target Start/End: Original strand, 39669799 - 39669882
Alignment:
Q  211 attttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattat 294  Q
    |||||| ||||||| ||||||||| ||||||||||| |||| ||| |||||| |||   |||||||||  ||| ||||||||||    
T  39669799 atttttagagaaatgatatttgtacaaccattttgtgacaattttttgacaactttcaatttcatattcacataatgttattat 39669882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 1788421 - 1788327
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||| |||||| |||| |||| ||||||||  |||||| ||| |||||||||| ||| ||||| |  ||| || || ||||||||||||||||    
T  1788421 tttttttagaaatgatatgtgtacaaccatttactaacaattttttgacaattttatctctcatactcacattatcttcttattctctctcttcc 1788327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 3919296 - 3919386
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctctt 304  Q
    ||||||||||| ||||||||| ||||||||||| | || |||  ||||| ||| ||| ||||| | |||| || || ||||||||||||||    
T  3919296 ttttgagaaatgatatttgtacaaccattttgttataatttttggacaactttctctctcatactcgcattatattcttattctctctctt 3919386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 21433472 - 21433386
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||| ||| ||| | ||| |  ||| ||||| ||||| |||||||    
T  21433472 gagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctcttatactcacattatgtttttattttctctct 21433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 28253013 - 28253103
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||| ||||||||| ||||| ||| | |||||||| |||||||||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  28253013 ttgagaaatgatatttgtacaaccactttctcacaactttttgacaattttctctctcatactcacattatcctcttattctctctcttcc 28253103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 1690446 - 1690483
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  1690446 gagaaataatatttgtacaaccattttgtgacaacttt 1690483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 30687042 - 30687139
Alignment:
Q  208 attattttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||  |||||||| ||||||||| |||||||| || ||||||||  ||||| ||||||| ||||| |  ||| || || ||| |||||||||||    
T  30687042 attatttaatgagaaatgatatttgtacaaccatttagtgacaacttttagacaactttttctatcatactcacattatattcttactctctctcttc 30687139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 49931549 - 49931614
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaac-tttgtgacaattttttctttcatatt 278  Q
    ||||||||||| ||||||||| || |||||| ||||||| |||||||||| ||| ||| |||||||    
T  49931549 ttttgagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcatatt 49931614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 52233292 - 52233207
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||||| ||||||||| | |||| ||| |||||||||| ||| ||||| || ||| ||  | |||||||||||||    
T  52233292 gagaaatgatatttgtacaaccattttctcacaattttttgacaattttctctatcatacttacattatcctcttattctctctct 52233207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 5959387 - 5959475
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| ||||||| ||| ||||||||  ||||| ||| ||| ||||| |  |||||  || |||||||||||||||    
T  5959387 tgagaaatgatatttgtataaccattatgtgacaacttttggacaactttctctctcatactcacatgagattcttattctctctcttc 5959475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 8959276 - 8959240
Alignment:
Q  219 agaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  8959276 agaaatgatatttgtataaccattttgtaacaacttt 8959240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 23226520 - 23226484
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaa 251  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  23226520 tttgagaaataatatttgtacaaccattttgtgacaa 23226484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 26585244 - 26585156
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||| ||||||| | ||||||   |||| ||||||| ||||| | |||||||| | |||| |||||||||||    
T  26585244 gagaaatgatatttgtacaactattttgtgataacttttgtacaactttttctctcataatcgcatgatggtcttatcctctctcttcc 26585156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 29632434 - 29632522
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| |   |||||||||||| ||| |||||||||| ||| ||| |||   || ||||| ||||||||||||||||    
T  29632434 gagaaatgatatttgtacatttattttgtaacaattttttgacaattttctctctcacattcatattatgtttttattctctctcttcc 29632522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 30530650 - 30530558
Alignment:
Q  213 tttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||| ||||||| |||||| || ||||||||||| ||||||||  ||||| ||| ||| ||||| |  ||| || || |||||||||||||||    
T  30530650 ttttagagaaatgatatttatacaaccattttgtgacaacttttagacaactttctctctcatactcacattatatttttattctctctcttc 30530558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 42299257 - 42299197
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatt 278  Q
    ||||||||||||||||| ||||||||||| | || |||  ||||||||||| | |||||||    
T  42299257 gagaaataatatttgtacaaccattttgtgataatttttagacaattttttttctcatatt 42299197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 42615858 - 42615918
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    ||||||||| ||||||||| || |||||| ||| || ||| |||||| |||||||||||||    
T  42615858 ttgagaaatgatatttgtacaatcattttttaataattttttgacaactttttctttcata 42615918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 42792296 - 42792352
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttct 270  Q
    ||||||||||| ||||||||| ||||| ||| | |||| | ||||||||||||||||    
T  42792296 ttttgagaaatgatatttgtacaaccactttattacaattatgtgacaattttttct 42792352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 43457890 - 43457802
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||  | ||||||  ||||| ||| ||| |||||||  ||| |||||||| | |||||||||||    
T  43457890 gagaaatgatatttgtacaaccattttgcgataacttttggacaactttctctctcatattctcattatgttattttcctctctcttcc 43457802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 49425738 - 49425825
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| |||||||| |||||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  49425738 gagaaatgatatttgtacaaccactttgtgacaacttt-tgacaactttatctctcatactcacattattttcttattctctctcttcc 49425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 15611 - 15517
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||| |||||| ||||||||| ||||| ||||| |||||||| |||||||||| ||| ||| | |  ||| ||||| ||||||||||||||||    
T  15611 tttttttagaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcaaactcacattatgtttttattctctctcttcc 15517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 40212560 - 40212483
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattatt 295  Q
    ||||||||||||||||| ||||| ||| |||||| ||| |||||||||| ||| |||||||| ||| ||||| |||||    
T  40212560 gagaaataatatttgtacaaccactttctaacaattttttgacaattttctctctcatatttacattatgtttttatt 40212483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 3344856 - 3344944
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| |||||||||  |||||||| |||||| ||| |||| | ||| ||| |||||||  ||||||||||||||||||||| ||||    
T  3344856 gagaaatgatatttgtatcaccattttttaacaattttttgacgactttctctctcatattcacatgatgttattattctctcttttcc 3344944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 44511139 - 44511227
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||| ||| ||||||||||| ||||||||   |||| ||| ||||||||| |  ||||||||| ||||||||||||||||    
T  44511139 gagaaatgatattcgtacaaccattttgtgacaacttttgtacaactttctctttcatactcacatgatgttcttattctctctcttcc 44511227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 48522156 - 48522244
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| |||||||||   ||||||||  ||||| ||||||| ||||| |  ||| ||||||||||||||||||||||    
T  48522156 gagaaatgatatttgtacaaccatttttgtacaacttttagacaactttttctctcatactcacattatgttattattctctctcttcc 48522244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 29609935 - 29609848
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    ||||||| ||||||||| ||| |||||   |||||||| |||||| ||| ||| ||||| || |||||||||||||| ||||||||||    
T  29609935 gagaaatcatatttgtacaactattttactacaactttttgacaactttctctctcatacttacatgatgttattatcctctctcttc 29609848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 16567316 - 16567401
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||||| ||||||||| | | |||||| |||||||||| ||||||||| |  ||| || || |||||||||||||    
T  16567316 gagaaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattatattcttattctctctct 16567401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 16598346 - 16598261
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||| ||||||||| ||||||||| | | |||||| |||||||||| ||||||||| |  ||| || || |||||||||||||    
T  16598346 gagaaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattatattcttattctctctct 16598261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 31436422 - 31436507
Alignment:
Q  221 aaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||| ||||||||| ||||||||| | |||||||| |||||||||||||| ||||| || ||| || || ||||||| ||| ||||    
T  31436422 aaatgatatttgtacaaccattttttgacaactttttgacaattttttctctcatacttacattatattcttattctatctgttcc 31436507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 39369301 - 39369390
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| |||| ||||||||||||||| ||| || |||||||  |||| |  || ||| || ||||||||||||||||    
T  39369301 tgagaaatgatatttgtacaacccttttgtaacaactttttgataactttttctcccatactcacaagattttcttattctctctcttcc 39369390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 42663083 - 42663168
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctc 302  Q
    |||||||| ||||||||| | ||||||||| |||||||| |||||| | | | ||||||| || ||| ||||| ||||||||||||    
T  42663083 tgagaaatgatatttgtacatccattttgtgacaactttttgacaactctctatttcatacttacattatgtttttattctctctc 42663168  T

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Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 3341699 - 3341787
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||| ||| ||||||  ||| | ||| ||| ||||| |  ||||||||||||||||||||| ||||    
T  3341699 gagaaatgatatttgtacaaccattttttaagaacttttcgacgactttctctctcatactcacatgatgttattattctctcttttcc 3341787  T

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Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 19426580 - 19426668
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||| |||||||| |||||| ||| ||| ||||| |  ||| ||  | ||||||||||||||||    
T  19426580 gagaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactcacattatcctcttattctctctcttcc 19426668  T

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Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 303
Target Start/End: Original strand, 33212040 - 33212127
Alignment:
Q  216 ttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctct 303  Q
    ||||||||| ||||||||| ||||||||| |||||| ||| |||||| ||| ||| ||||| |  ||| || || |||||||||||||    
T  33212040 ttgagaaatgatatttgtacaaccattttctaacaattttttgacaactttatctctcatactcacattatctttttattctctctct 33212127  T

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Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 31365154 - 31365092
Alignment:
Q  214 ttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    |||||| |||| ||||||||| |||||||||  ||||||||| | |||||||||||| |||||    
T  31365154 ttttgataaatgatatttgtacaaccattttacaacaactttttaacaattttttctctcata 31365092  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 38096510 - 38096452
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcata 276  Q
    ||||||||||||||||| ||||||||||| |||| ||| |||||| | | |||||||||    
T  38096510 gagaaataatatttgtacaaccattttgtgacaattttttgacaactctctctttcata 38096452  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 23844964 - 23845013
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaatttt 266  Q
    |||||||| ||||||||| ||| ||||||||| || ||||||||||||||    
T  23844964 tgagaaatgatatttgtacaacaattttgtaataattttgtgacaatttt 23845013  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 33050182 - 33050271
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||| ||||||||| ||||||||||| ||||||||   |||| ||| ||| ||||| |  ||||||| | |||| |||||||||||    
T  33050182 tgagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacatgatggtcttatcctctctcttcc 33050271  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 34108927 - 34108842
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaacttt-gtgacaattttttctttcatatttgcatgatgttattattctctct 301  Q
    |||||||| |||| |||| ||||||||| |||||||||| ||||||||||| ||| ||||| |  ||| ||||| ||| |||||||    
T  34108927 tgagaaatgatatatgtacaaccattttctaacaacttttgtgacaattttctctctcatactcacattatgtttttactctctct 34108842  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 2347131 - 2347043
Alignment:
Q  217 tgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttc 305  Q
    |||||||| ||||||||| ||||||||||| |||||||||  |||| ||| ||| ||||| |  ||||||  | |||| ||||||||||    
T  2347131 tgagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgatagttttatcctctctcttc 2347043  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 19880313 - 19880265
Alignment:
Q  207 cattattttttgagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    |||||||||||||||||| || |||||| ||||| ||||| ||||||||    
T  19880313 cattattttttgagaaatgatgtttgtacaaccaatttgtgacaacttt 19880265  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 23910321 - 23910261
Alignment:
Q  219 agaaataatatttgtaaaaccattttgtaacaacttt-gtgacaattttttctttcatatt 278  Q
    |||||| ||||||||| ||||||||| | |||||||| |||||||| |||||| |||||||    
T  23910321 agaaatgatatttgtacaaccattttttgacaacttttgtgacaatattttctctcatatt 23910261  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 33881776 - 33881688
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| |||||| || ||||||||||  | |||||| ||| || ||| ||| ||||| |  |||||||||||||| |||||||||||    
T  33881776 gagaaatgatatttatacaaccattttggtataactttttgataactttctctctcatactcacatgatgttattatcctctctcttcc 33881688  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 46148166 - 46148254
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| |||||||||||| |||||| | |||||||||  |||| ||| ||| ||||| |  ||| || || ||||||||||||||||    
T  46148166 gagaaatgatatttgtaaaatcattttttgacaactttgaaacaagtttatctctcatactcacattatattcttattctctctcttcc 46148254  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 60469 - 60529
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatt 278  Q
    ||||||| ||||||||| ||||||||| | |||||||| |||||| |||||||||||||||    
T  60469 gagaaatgatatttgtacaaccattttattacaactttttgacaactttttctttcatatt 60529  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 91948 - 91996
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaatttt 266  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||    
T  91948 gagaaataatatttgtacaaccactttctaacaactttttgacaatttt 91996  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 301
Target Start/End: Complemental strand, 278511 - 278428
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctct 301  Q
    ||||||| ||||||||| ||||||| |||||||| ||| |||||| | ||||| ||||| | |||| ||||| |||||||||||    
T  278511 gagaaattatatttgtacaaccattctgtaacaattttttgacaaatatttctctcatagtggcattatgttcttattctctct 278428  T

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Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 11613 - 11519
Alignment:
Q  212 ttttttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||||||||| ||||||||| | | | ||||| |||||||  |||||||||| ||| ||||| |  ||| ||||| ||||||||||||||||    
T  11613 ttttttgagaaatgatatttgtacatctactttgtgacaacttcttgacaattttctctctcatactcacattatgtttttattctctctcttcc 11519  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 16665 - 16577
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||||||||||||  || |||||| ||| ||||| |  ||| || || ||| ||||||||||||    
T  16665 gagaaatgatatttgtacaaccattttgtaacaacttttagataattttctctctcatactcacattatattcttactctctctcttcc 16577  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 56179 - 56267
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||||||||||||||||||  || |||||| ||| ||||| |  ||| || || ||| ||||||||||||    
T  56179 gagaaatgatatttgtacaaccattttgtaacaacttttagataattttctctctcatactcacattatattcttactctctctcttcc 56267  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 72366 - 72454
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| |||||||||| |||||||||   |||||||| ||| |||||||  |||||  || |||| |||||||||||    
T  72366 gagaaatgatatttgtacaaccattttgcaacaacttttgaacaattttctctctcatattcacatgacatttttatcctctctcttcc 72454  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 155903 - 155994
Alignment:
Q  215 tttgagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    |||||||||| ||||||||| ||||||||| | |||||||| |||||| ||| ||| || || |  ||| || || ||||||||||||||||    
T  155903 tttgagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcgtactcacattatattcttattctctctcttcc 155994  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 72240 - 72203
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaacttt 255  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  72240 gagaaatgatatttgtacaaccattttgtaacaacttt 72203  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 1567 - 1479
Alignment:
Q  218 gagaaataatatttgtaaaaccattttgtaacaactttgtgacaattttttctttcatatttgcatgatgttattattctctctcttcc 306  Q
    ||||||| ||||||||| ||||| ||||| ||||||||   |||||||| ||| ||||  |  ||||||| | ||||||||||||||||    
T  1567 gagaaatgatatttgtataaccaatttgtgacaacttttgtacaattttctctctcattctcacatgatggtcttattctctctcttcc 1479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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