View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1291_low_8 (Length: 785)
Name: NF1291_low_8
Description: NF1291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1291_low_8 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 555; Significance: 0; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 555; E-Value: 0
Query Start/End: Original strand, 99 - 697
Target Start/End: Complemental strand, 5553257 - 5552659
Alignment:
| Q |
99 |
cttttcacgttgaaggacttctgaatcttgttaaccttgacttgagttataattctatcaatggtagcatttcatcggtcctttttacactcccgtatct |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5553257 |
cttttcacgttgaaggacttctgaatcttgttaaccttgacttgagttataattctatcaatggtagcatttcatcggtcctttttacactcccgtatct |
5553158 |
T |
|
| Q |
199 |
gaaaagtatccgactttcattcaaccacttcagtaaacttgaagaattcacaatcatatcttcctctatattagaatcccttgaattaagaagcaatcat |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5553157 |
gaaaagtatccgactttcattcaaccacttcagtaaacttgaagaattcacaatcatatcttcctctatattagaatcccttgaattaagaagcaatgat |
5553058 |
T |
|
| Q |
299 |
ctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagttcactggatccgtccaattagatgaac |
398 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5553057 |
caatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcgtctaacaagttcactggatccgtccaattagatgaac |
5552958 |
T |
|
| Q |
399 |
tttttggccttacaagtttaagtgaactacatctttcatacaacaacttatcaatcagttggaatgcttcaaattatgatttactttctattcccaacat |
498 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5552957 |
tttttggccttacaagtttaagtgaactccatctttcatacaacaacttatcaatcagttggaatgcttcaaattatgatttactttctattcccaacat |
5552858 |
T |
|
| Q |
499 |
tgatgttttaggtttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagatt |
598 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5552857 |
taatgttttaggtttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccggattgggctctctagacctttcagataaccagatt |
5552758 |
T |
|
| Q |
599 |
catggaatagtaccaaattggatttggaaattaccatatcttgataagctaaatatttctcacaatattcttactagctttcaaagaccaatgaagaat |
697 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| |
|
|
| T |
5552757 |
catggaatagtaccaaactggatttggaaactaccatatcttgataagctaaatatttctcacaattttcttactaactttcaaagaccaatgacgaat |
5552659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 99 - 697
Target Start/End: Original strand, 5853167 - 5853765
Alignment:
| Q |
99 |
cttttcacgttgaaggacttctgaatcttgttaaccttgacttgagttataattctatcaatggtagcatttcatcggtcctttttacactcccgtatct |
198 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
5853167 |
cttttcacagtgaaggactgctgaatcttgttaaacttgacttgagttttaattctatcaatggtagcatttcatcattcctttttacactcccatatct |
5853266 |
T |
|
| Q |
199 |
gaaaagtatccgactttcattcaaccacttcagtaaacttgaagaattcacaatcatatcttcctctatattagaatcccttgaattaagaagcaatcat |
298 |
Q |
| |
|
| ||||| |||||||||||| ||||||||| | || || ||||||||||||||||||| |||||| |||||||||||||||| |||||||||||| || |
|
|
| T |
5853267 |
gtaaagtctccgactttcatccaaccactttaacaatctagaagaattcacaatcatatattcctccgtattagaatcccttgatttaagaagcaatgat |
5853366 |
T |
|
| Q |
299 |
ctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagttcactggatccgtccaattagatgaac |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5853367 |
ctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagttcactggatccgtccaattagatgaac |
5853466 |
T |
|
| Q |
399 |
tttttggccttacaagtttaagtgaactacatctttcatacaacaacttatcaatcagttggaatgcttcaaattatgatttactttctattcccaacat |
498 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
5853467 |
tttttggccttacaagtttaagtgaactacatctttcatataacgacttatcaatcagttggaatgctttaaattatgatttactttctattcccaaaat |
5853566 |
T |
|
| Q |
499 |
tgatgttttaggtttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagatt |
598 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
5853567 |
taatgttctaggtttggcatcctgcaactttaaaacatttcctagtttcttgattaaccaatccgaattgggttatctagacctttcagataaccagatt |
5853666 |
T |
|
| Q |
599 |
catggaatagtaccaaattggatttggaaattaccatatcttgataagctaaatatttctcacaatattcttactagctttcaaagaccaatgaagaat |
697 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||| |||| |||| |||||||||||||||||||||| |
|
|
| T |
5853667 |
catggaatagtaccaaactggatttggaaactaccatatcttgatacgctaaagatttctcacaattttctcactaactttcaaagaccaatgaagaat |
5853765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 212 - 640
Target Start/End: Complemental strand, 5858069 - 5857641
Alignment:
| Q |
212 |
ctttcattcaaccacttcagtaaacttgaagaattcacaatcatatcttcctctatattagaatcccttgaattaagaagcaatcatctatcagggcctt |
311 |
Q |
| |
|
|||||||||||||| || |||| | | ||||||||||||||||| |||||||| ||| | ||||| ||||| |||||| || |||||||||||| |
|
|
| T |
5858069 |
ctttcattcaaccaatttagtatattagaagaattcacaatcatgtcttcctc---attgaacattcttgatttaagcagcaatgatttatcagggcctt |
5857973 |
T |
|
| Q |
312 |
ttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagttcactggatccgtccaattagatgaactttttggccttac |
411 |
Q |
| |
|
|||||| ||| || | ||||| |||||||||||| ||||| ||||| ||||||||||| | || |||| ||||| ||||| ||||||||| || | |
|
|
| T |
5857972 |
ttccaatatccattgttcagctcggttcactttattcacttgacctttcgtctaacaagtttaatgaatccctccaactagataaactttttgagctcaa |
5857873 |
T |
|
| Q |
412 |
aagtttaagtgaactacatctttcatacaacaacttatcaat---cagttggaatgcttcaaattatgatttactttctattcccaacattgatgtttta |
508 |
Q |
| |
|
|| |||| | || | ||||||||||||||||||||||| || | | || | ||||||| |||| | | | ||||||||| |||| ||| || |
|
|
| T |
5857872 |
aaacttaactagtttatacctttcatacaacaacttatcaataatcaatggaaaaggttcaaatgttgatctgtctacgattcccaactttgacgttcta |
5857773 |
T |
|
| Q |
509 |
ggtttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagattcatggaatag |
608 |
Q |
| |
|
| ||||||||||||||||| ||||| | |||| ||||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5857772 |
agattggcatcctgcaacttgaaaactatccctagtttcttgataaaccaatccagattgaccattctagacctttcagataaccagattcatggaatag |
5857673 |
T |
|
| Q |
609 |
taccaaattggatttggaaattaccatatctt |
640 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |
|
|
| T |
5857672 |
taccaaattggatttggaaactaccatatctt |
5857641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 212 - 669
Target Start/End: Complemental strand, 3748921 - 3748464
Alignment:
| Q |
212 |
ctttcattcaaccacttcagtaaacttgaagaattcacaatcatatcttcctctatattagaatcccttgaattaagaagcaatcatctatcagggcctt |
311 |
Q |
| |
|
|||||||| |||||||| |||||||| |||||||||||||||| |||||||| ||||||| |||| || ||||| | ||| |||||||||| |||| |
|
|
| T |
3748921 |
ctttcattgaaccactttagtaaactagaagaattcacaatcaattcttcctccgtattagacaccctagatttaagcaacaacgatctatcaggacctt |
3748822 |
T |
|
| Q |
312 |
ttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagttcactggatccgtccaattagatgaactttttggccttac |
411 |
Q |
| |
|
|||||| |||| | |||||||| ||||||| | ||| ||||||||| |||||||| |||||||||| | || |||| || ||||| || | |
|
|
| T |
3748821 |
ttccaatatctgtcttgcagctcaagtcactttctgtcctcgatctttccactaacaagatcactggatcgctgcagctagacgagcttttaaagctcaa |
3748722 |
T |
|
| Q |
412 |
aagtttaagtgaactacatctttcatacaacaacttatcaatcagttggaatgcttcaaattatgatttactttctattcccaacattgatgttttaggt |
511 |
Q |
| |
|
|| |||||||||| || | ||||||| ||| |||||||| |||| | ||| | || || |||||| || ||||||||||||| || || |
|
|
| T |
3748721 |
aaatttaagtgaattagacctttcattcaataacttatcgatcaatgtgaacgtgccacatgttgatttgtcttttattcccaacattagctttctaaaa |
3748622 |
T |
|
| Q |
512 |
ttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagattcatggaatagtac |
611 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||| ||||||||| ||||| | |||| | |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3748621 |
ttggcacgctgcaacttgaaaacttttcctagtttcttgataaaccatacaacattgatccaactagacctttcagataaccagattcaaggaatagtac |
3748522 |
T |
|
| Q |
612 |
caaattggatttggaaattaccatatcttgataagctaaatatttctcacaatattct |
669 |
Q |
| |
|
|||||||| |||||||| | |||||||| || || ||||||||||||||| |||| |
|
|
| T |
3748521 |
caaattgggtttggaaactgccatatctagaagctcttaatatttctcacaatcttct |
3748464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 455
Target Start/End: Original strand, 5539598 - 5539777
Alignment:
| Q |
276 |
cccttgaattaagaagcaatcatctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagttcac |
375 |
Q |
| |
|
||||||| ||||| |||||| ||||||||||| ||||||||| |||||| || |||||| ||||||||| | ||| |||||||||| ||||| ||| | |
|
|
| T |
5539598 |
cccttgatttaagtagcaataatctatcagggtcttttccaacatctatcttccagcttcgttcactttctgtcctcgatctttcctttaacaggttgaa |
5539697 |
T |
|
| Q |
376 |
tggatccgtccaattagatgaactttttggccttacaagtttaagtgaactacatctttcatacaacaacttatcaatca |
455 |
Q |
| |
|
||||| | || |||||||| ||||| || | || ||||| || |||| | ||||||||||||||| ||||||||| |
|
|
| T |
5539698 |
tggattgctgcagttagatgagcttttgaagctaagaaatttaactgcactagacctttcatacaacaacatatcaatca |
5539777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 212 - 343
Target Start/End: Complemental strand, 5564733 - 5564602
Alignment:
| Q |
212 |
ctttcattcaaccacttcagtaaacttgaagaattcacaatcatatcttcctctatattagaatcccttgaattaagaagcaatcatctatcagggcctt |
311 |
Q |
| |
|
||||||||||||||||||| || | | || ||||| |||||||| ||| |||| |||| | | ||||| ||||| |||||||||||||| || |||| |
|
|
| T |
5564733 |
ctttcattcaaccacttcaatacagtagatgaatttacaatcatctctccctcctcattaaacactcttgatttaagcagcaatcatctatctggtcctt |
5564634 |
T |
|
| Q |
312 |
ttccaaaatctatattgcagcttggttcactt |
343 |
Q |
| |
|
|||||| |||||| || ||||||||||||||| |
|
|
| T |
5564633 |
ttccaacatctatctttcagcttggttcactt |
5564602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 578 - 628
Target Start/End: Complemental strand, 5564367 - 5564317
Alignment:
| Q |
578 |
gacctttcagataaccagattcatggaatagtaccaaattggatttggaaa |
628 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5564367 |
gacctttcaaataaccagattcaaggaatagtaccaaattggatttggaaa |
5564317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 626
Target Start/End: Complemental strand, 5558642 - 5558528
Alignment:
| Q |
512 |
ttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagattcatggaatagtac |
611 |
Q |
| |
|
|||||| |||||||||| ||||| || |||||||||||||| ||||||||| || | |||||||||||||| |||||| ||||| ||| |||| | |
|
|
| T |
5558642 |
ttggcaacctgcaacttgaaaactttccctaatttcttgatgaaccaatccatgttattccatctagacctttcagctaaccaaattcacggagtagtgc |
5558543 |
T |
|
| Q |
612 |
caaattggatttgga |
626 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
5558542 |
ccaattggatttgga |
5558528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 366
Target Start/End: Original strand, 5895379 - 5895473
Alignment:
| Q |
272 |
gaatcccttgaattaagaagcaatcatctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaa |
366 |
Q |
| |
|
|||| |||||| ||||| |||||| ||||||||||||||||||||| |||||| || ||||| ||||||||| | ||| ||||||||||||| |
|
|
| T |
5895379 |
gaattccttgatttaagtagcaataatctatcagggccttttccaacatctatcttccagctccgttcactttctttcctctatctttcctctaa |
5895473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 212 - 361
Target Start/End: Original strand, 5571397 - 5571546
Alignment:
| Q |
212 |
ctttcattcaaccacttcagtaaacttgaagaattcacaatcatatcttcctctatattagaatcccttgaattaagaagcaatcatctatcagggcctt |
311 |
Q |
| |
|
||||||| ||||| || |||||| |||| ||||||| || ||| ||||||||| || | | ||||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
5571397 |
ctttcatccaaccggtttagtaaatttgacgaattcaaaaacatgtcttcctctgtaattaacacccttgatttaagtagcaataatctatcagggcctt |
5571496 |
T |
|
| Q |
312 |
ttccaaaatctatattgcagcttggttcactttatcgccttgatctttcc |
361 |
Q |
| |
|
|||||| |||||| || ||| | | ||||||||| ||| ||||||||| |
|
|
| T |
5571497 |
ttccaacatctatcttccagttcagatcactttatgtcctcgatctttcc |
5571546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 512 - 626
Target Start/End: Original strand, 5571697 - 5571811
Alignment:
| Q |
512 |
ttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagattcatggaatagtac |
611 |
Q |
| |
|
||||||||||||||| | ||||| || |||| |||||||| ||| ||||| |||| || ||||||||| ||| |||| |||||||| |||||||| | |
|
|
| T |
5571697 |
ttggcatcctgcaacctgaaaactttccctagtttcttgagaaacaaatccagattgagcattctagacctctcacataatcagattcaaggaatagttc |
5571796 |
T |
|
| Q |
612 |
caaattggatttgga |
626 |
Q |
| |
|
| || |||||||||| |
|
|
| T |
5571797 |
ccaactggatttgga |
5571811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 669
Target Start/End: Complemental strand, 5613238 - 5613080
Alignment:
| Q |
511 |
tttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagattcatggaatagta |
610 |
Q |
| |
|
|||||||||||||||| | ||||| ||||||| ||||||| || ||||| ||||| |||||||||||||| ||||| ||||| ||| | || |
|
|
| T |
5613238 |
tttggcatcctgcaacctgaaaacttttcctatattcttgagaaatcaatcaacattggaaaatctagacctttcagccaaccaaattcaaggagttgtg |
5613139 |
T |
|
| Q |
611 |
ccaaattggatttggaaattaccatatcttgataagctaaatatttctcacaatattct |
669 |
Q |
| |
|
|||||||||||||||||| ||| | |||||| |||| |||||||| |||||| |||| |
|
|
| T |
5613138 |
ccaaattggatttggaaactacaaagtcttgaacagcttaatatttcacacaattttct |
5613080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 628
Target Start/End: Complemental strand, 5605059 - 5605003
Alignment:
| Q |
572 |
tctctagacctttcagataaccagattcatggaatagtaccaaattggatttggaaa |
628 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||| |||| || ||||||||||||||| |
|
|
| T |
5605059 |
tctctagacctttcagataacaacattcaaggagtagtgccgaattggatttggaaa |
5605003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 276 - 455
Target Start/End: Complemental strand, 5558878 - 5558699
Alignment:
| Q |
276 |
cccttgaattaagaagcaatcatctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagttcac |
375 |
Q |
| |
|
||||||| ||||| || ||| ||||| ||||| || |||||| |||||| || | |||| ||||||||| | ||| |||||||||||||||| ||| | |
|
|
| T |
5558878 |
cccttgatttaagtagaaataatctagcagggtctgttccaacatctatcttcctgcttcgttcactttctgtcctcgatctttcctctaacaggttgaa |
5558779 |
T |
|
| Q |
376 |
tggatccgtccaattagatgaactttttggccttacaagtttaagtgaactacatctttcatacaacaacttatcaatca |
455 |
Q |
| |
|
||| || | || ||||| ||||||| | |||| || ||||| || |||| | |||||||| |||||| ||||||||| |
|
|
| T |
5558778 |
tgggtcactgcatctagataaacttttggagcttagaaatttaactgcactaaacctttcatataacaacatatcaatca |
5558699 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 455
Target Start/End: Original strand, 5848315 - 5848498
Alignment:
| Q |
272 |
gaatcccttgaattaagaagcaatcatctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagt |
371 |
Q |
| |
|
|||| |||||| ||||| |||||| ||||||||||||||||||||| |||| | || ||| | ||||||||| | ||| |||||||| ||||| | || |
|
|
| T |
5848315 |
gaattccttgatttaagtagcaataatctatcagggccttttccaacatctctcttccagttccgttcactttttttcctcgatctttcatctaataggt |
5848414 |
T |
|
| Q |
372 |
tcactggatccgtccaattagatgaactttttggccttacaagtttaagtgaactacatctttcatacaacaacttatcaatca |
455 |
Q |
| |
|
| | ||| || | || ||||||| ||||| | |||| || ||||| ||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
5848415 |
tgaatgggtcaatgcagctagatgagcttttggagcttagaaatttaactgacctaaccctttcatacaacaacatatcaatca |
5848498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 277 - 372
Target Start/End: Original strand, 5886539 - 5886634
Alignment:
| Q |
277 |
ccttgaattaagaagcaatcatctatcagggccttttccaaaatctatattgcagcttggttcactttatcgccttgatctttcctctaacaagtt |
372 |
Q |
| |
|
|||||| ||||| |||||| || |||||||||||||||||| |||||| || ||||| |||||||| | ||| |||||||||||||||||| |
|
|
| T |
5886539 |
ccttgatttaagtagcaataatatatcagggccttttccaacatctatcttccagctcaattcactttctgtcctcagtctttcctctaacaagtt |
5886634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 512 - 666
Target Start/End: Original strand, 5539834 - 5539988
Alignment:
| Q |
512 |
ttggcatcctgcaactttaaaacatttcctaatttcttgattaaccaatccgaattgggctctctagacctttcagataaccagattcatggaatagtac |
611 |
Q |
| |
|
||||||||||||||| | ||||| || |||| |||||||| ||| ||||| |||| | ||||||||||||| |||| || |||||||||| ||| | |
|
|
| T |
5539834 |
ttggcatcctgcaacctgaaaactttccctagtttcttgagaaacaaatccagattgaacattctagacctttcaaataatcaaattcatggaacagtgc |
5539933 |
T |
|
| Q |
612 |
caaattggatttggaaattaccatatcttgataagctaaatatttctcacaatat |
666 |
Q |
| |
|
| || ||||| ||||| ||| | ||||| | || || ||| ||||||||||||| |
|
|
| T |
5539934 |
ccaactggatatggaagctacaaaatcttcaaaaccttaatgtttctcacaatat |
5539988 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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