View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1291_low_83 (Length: 251)
Name: NF1291_low_83
Description: NF1291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1291_low_83 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 3287183 - 3286952
Alignment:
| Q |
17 |
tggcaattagacaattatgcaaaaaagcctcccacttgagtgaaggttaggcaatgctaaagtagatgaatgagagagttgattcattctaaatgccact |
116 |
Q |
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| T |
3287183 |
tggcaattagacaattatgcaaaaaagcctcccacttgagtgaaggttaggcaatgctaaagtagatgaatgagagagttgattcattctaaatgccact |
3287084 |
T |
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| Q |
117 |
aactcaatacgtggattgtcaaagtttcataactgggtcaaaacgaagtgggactggacaatgacgcaagaaaaccacttctatgcttttagcaccatta |
216 |
Q |
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|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
3287083 |
aaatcaatatgtggattgtcaaagtttcataactgggtcaaaacgaagtgggactggacaatgacgcaagaaaaccacttctatgcttttagcaccacta |
3286984 |
T |
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| Q |
217 |
agtactttgaagaatgagggagatagagttac |
248 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
3286983 |
agtactttgaagaatgagggagatagagttac |
3286952 |
T |
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