View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12920_low_15 (Length: 329)
Name: NF12920_low_15
Description: NF12920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12920_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 32645211 - 32645523
Alignment:
| Q |
1 |
tgccaatgagagctcagctggatatctttttaccgttatcgactgcattaaaattcccacaaacaatttagaaataataatccacatatgacaccaaaca |
100 |
Q |
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| T |
32645211 |
tgccaatgatagctcagctggatatctttttaccgttatcgactgcattaaaattccaacaaacaatttagaaataataatccacatatgacaccaaaca |
32645310 |
T |
|
| Q |
101 |
tcatggtcgtatactttaattaattagttaagtgttttaagaattggatccttggtctgctcgatcaagtactaggtcagtaaattattggtcgaactac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32645311 |
tcatggtcgtatactttaattaattagttaagtgttttaagaattggatccttggtctgctcgatcaagtactaggtcagtaaatcattggtcgaactac |
32645410 |
T |
|
| Q |
201 |
tgggtcgttagtttacctgcaaaatgtagaaagaagataaagccacacagcccattagtatataaagagctccagcagtttgatggttatgagaggattc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32645411 |
tgggtcgttagtttacctgcaaaatgtagaaagaagataaagccacacagcccatcagtatataaagagctccagcagtttgatggttatgagaggattc |
32645510 |
T |
|
| Q |
301 |
gtgagttccattt |
313 |
Q |
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||||||||||||| |
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| T |
32645511 |
gtgagttccattt |
32645523 |
T |
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