View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12920_low_27 (Length: 226)
Name: NF12920_low_27
Description: NF12920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12920_low_27 |
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Alignment Details
Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 11457627 - 11457432
Alignment:
| Q |
13 |
ataatacttcaaatttttagattgaacgaaagggataccaatgtattatttctttctttctaatttttaatatatatcagtgttataaggtaaacgaact |
112 |
Q |
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| T |
11457627 |
ataatactttaaatttttagattgaacgaaagggataccaatgtattatttctttctttctaatttttaagatatatcagtgttataaggtaaacgaact |
11457528 |
T |
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| Q |
113 |
agtgttgagaatacgcacaacacataagaagaaaatcatttnnnnnnnntacatgttaactacaatttacaattgtgagtttagttatcatgcagc |
208 |
Q |
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| T |
11457527 |
agtgttgagaatacgcacaacacataagaagaaaatcatttaaaaaaaatacatgttagctacaatttacaattttgagtttagttatcatgcagc |
11457432 |
T |
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