View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12921_low_16 (Length: 252)

Name: NF12921_low_16
Description: NF12921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12921_low_16
NF12921_low_16
[»] chr2 (34 HSPs)
chr2 (10-190)||(207788-207968)
chr2 (10-189)||(1512815-1512994)
chr2 (10-189)||(40605411-40605590)
chr2 (10-190)||(5013445-5013625)
chr2 (10-190)||(26455948-26456128)
chr2 (10-189)||(13908303-13908482)
chr2 (10-189)||(13905371-13905549)
chr2 (10-189)||(6123754-6123934)
chr2 (10-189)||(27997369-27997548)
chr2 (10-189)||(28098739-28098918)
chr2 (10-189)||(25647558-25647734)
chr2 (10-183)||(36437521-36437694)
chr2 (10-190)||(1916687-1916867)
chr2 (10-189)||(20890722-20890901)
chr2 (10-189)||(2300863-2301039)
chr2 (10-189)||(35432053-35432232)
chr2 (30-189)||(19821946-19822105)
chr2 (30-189)||(19842167-19842326)
chr2 (10-189)||(42109348-42109527)
chr2 (10-140)||(1273025-1273155)
chr2 (69-189)||(184175-184295)
chr2 (69-189)||(2449409-2449529)
chr2 (69-189)||(976023-976141)
chr2 (190-252)||(5013711-5013773)
chr2 (190-252)||(35432318-35432380)
chr2 (190-248)||(207645-207703)
chr2 (190-252)||(1512667-1512729)
chr2 (10-57)||(21589022-21589069)
chr2 (126-172)||(23455689-23455735)
chr2 (191-252)||(13907781-13907842)
chr2 (191-252)||(26455426-26455487)
chr2 (191-252)||(26455801-26455862)
chr2 (191-252)||(40605263-40605324)
chr2 (191-252)||(13908156-13908216)
[»] scaffold0121 (1 HSPs)
scaffold0121 (10-189)||(45618-45797)
[»] chr7 (24 HSPs)
chr7 (10-189)||(7893798-7893977)
chr7 (10-189)||(26168885-26169064)
chr7 (10-189)||(22007021-22007200)
chr7 (10-190)||(32660264-32660444)
chr7 (10-189)||(32038484-32038663)
chr7 (10-189)||(45115871-45116050)
chr7 (10-189)||(29956518-29956697)
chr7 (10-153)||(20955637-20955780)
chr7 (10-189)||(27715985-27716163)
chr7 (10-189)||(17696956-17697135)
chr7 (10-189)||(31100180-31100358)
chr7 (10-189)||(16719941-16720121)
chr7 (30-183)||(13398312-13398465)
chr7 (10-190)||(46909388-46909567)
chr7 (38-183)||(5093617-5093762)
chr7 (69-188)||(7888909-7889028)
chr7 (190-252)||(45115723-45115785)
chr7 (190-252)||(26168737-26168799)
chr7 (190-252)||(32660120-32660182)
chr7 (191-252)||(7893275-7893336)
chr7 (191-252)||(7893650-7893711)
chr7 (191-252)||(22006499-22006560)
chr7 (191-252)||(3595542-3595603)
chr7 (191-252)||(22006874-22006934)
[»] chr4 (24 HSPs)
chr4 (10-189)||(52682775-52682954)
chr4 (10-190)||(28389444-28389624)
chr4 (10-190)||(30387908-30388088)
chr4 (10-189)||(29359092-29359271)
chr4 (10-189)||(41859751-41859930)
chr4 (10-174)||(16909113-16909277)
chr4 (10-188)||(21382693-21382870)
chr4 (10-189)||(19515106-19515285)
chr4 (10-189)||(21581496-21581675)
chr4 (10-165)||(25839384-25839539)
chr4 (10-190)||(42347780-42347960)
chr4 (38-189)||(53288351-53288502)
chr4 (10-189)||(31448333-31448516)
chr4 (190-252)||(21382544-21382606)
chr4 (190-252)||(28389297-28389359)
chr4 (190-252)||(29359346-29359408)
chr4 (190-252)||(30388173-30388235)
chr4 (190-252)||(16908959-16909021)
chr4 (126-172)||(8121116-8121162)
chr4 (126-172)||(36895648-36895694)
chr4 (191-252)||(41860017-41860078)
chr4 (191-252)||(52682252-52682313)
chr4 (126-172)||(26602405-26602451)
chr4 (191-252)||(52682627-52682688)
[»] chr3 (39 HSPs)
chr3 (10-189)||(38655801-38655980)
chr3 (10-189)||(26951562-26951741)
chr3 (10-189)||(36087468-36087647)
chr3 (10-190)||(49562287-49562467)
chr3 (10-190)||(35716363-35716543)
chr3 (10-189)||(18198758-18198937)
chr3 (10-189)||(36091306-36091485)
chr3 (10-189)||(854630-854809)
chr3 (10-190)||(36947035-36947215)
chr3 (10-190)||(4594166-4594346)
chr3 (10-189)||(13454761-13454940)
chr3 (12-188)||(16651476-16651652)
chr3 (10-189)||(31487279-31487457)
chr3 (10-189)||(52418673-52418852)
chr3 (10-189)||(12260882-12261062)
chr3 (10-189)||(12825255-12825434)
chr3 (10-189)||(11826531-11826710)
chr3 (20-189)||(33003773-33003942)
chr3 (10-189)||(859881-860069)
chr3 (69-189)||(26947903-26948023)
chr3 (190-252)||(31487131-31487193)
chr3 (190-252)||(35716216-35716278)
chr3 (190-252)||(49562552-49562614)
chr3 (191-252)||(36947300-36947361)
chr3 (190-252)||(18198610-18198672)
chr3 (190-250)||(36087733-36087793)
chr3 (10-76)||(29864704-29864770)
chr3 (190-252)||(38656066-38656128)
chr3 (190-252)||(52418937-52418999)
chr3 (30-91)||(47726776-47726837)
chr3 (113-172)||(18256305-18256364)
chr3 (126-172)||(36006257-36006303)
chr3 (191-252)||(26951039-26951100)
chr3 (191-252)||(36091572-36091633)
chr3 (191-250)||(18201268-18201327)
chr3 (126-172)||(53521059-53521105)
chr3 (191-252)||(18256140-18256201)
chr3 (191-252)||(26951414-26951475)
chr3 (207-252)||(36091963-36092008)
[»] chr1 (31 HSPs)
chr1 (10-189)||(2045127-2045306)
chr1 (10-189)||(45503411-45503590)
chr1 (10-189)||(50708917-50709096)
chr1 (10-188)||(13926180-13926358)
chr1 (10-188)||(48651061-48651238)
chr1 (10-189)||(2047378-2047557)
chr1 (10-189)||(36866789-36866968)
chr1 (10-189)||(38210872-38211051)
chr1 (10-189)||(45501166-45501345)
chr1 (10-189)||(29245496-29245675)
chr1 (10-187)||(49787237-49787412)
chr1 (25-189)||(39513149-39513313)
chr1 (10-179)||(26211706-26211874)
chr1 (30-190)||(48960767-48960927)
chr1 (10-178)||(15691525-15691693)
chr1 (69-189)||(42496638-42496758)
chr1 (69-189)||(7480554-7480674)
chr1 (69-189)||(9533930-9534050)
chr1 (190-252)||(29245348-29245410)
chr1 (190-252)||(39513399-39513461)
chr1 (190-252)||(45503676-45503738)
chr1 (190-252)||(50708769-50708831)
chr1 (190-252)||(48650912-48650974)
chr1 (190-252)||(38211137-38211199)
chr1 (190-252)||(13926444-13926503)
chr1 (191-252)||(2045393-2045454)
chr1 (133-171)||(21056874-21056912)
chr1 (191-252)||(35594010-35594071)
chr1 (132-172)||(37891535-37891575)
chr1 (126-172)||(8256825-8256871)
chr1 (194-252)||(37891682-37891740)
[»] chr8 (17 HSPs)
chr8 (11-189)||(14994359-14994537)
chr8 (10-190)||(22729765-22729945)
chr8 (10-189)||(19961670-19961849)
chr8 (10-180)||(23827810-23827980)
chr8 (10-189)||(406042-406221)
chr8 (10-189)||(41376299-41376478)
chr8 (10-189)||(18265880-18266056)
chr8 (10-189)||(18274893-18275069)
chr8 (10-189)||(37983325-37983504)
chr8 (30-171)||(18492360-18492501)
chr8 (10-190)||(24011736-24011914)
chr8 (10-119)||(21639991-21640100)
chr8 (190-252)||(19961522-19961584)
chr8 (190-252)||(22730030-22730092)
chr8 (190-252)||(23827662-23827724)
chr8 (191-248)||(14994624-14994681)
chr8 (191-252)||(37589477-37589538)
[»] chr6 (13 HSPs)
chr6 (10-190)||(2280983-2281163)
chr6 (30-190)||(29371966-29372126)
chr6 (30-189)||(29369411-29369570)
chr6 (10-180)||(33004650-33004820)
chr6 (10-178)||(24458711-24458879)
chr6 (10-140)||(349252-349382)
chr6 (69-189)||(33045718-33045838)
chr6 (10-127)||(29924870-29924987)
chr6 (190-252)||(2280839-2280901)
chr6 (113-172)||(25971021-25971080)
chr6 (113-172)||(25975461-25975520)
chr6 (191-250)||(3591120-3591179)
chr6 (191-252)||(25971184-25971245)
[»] chr5 (15 HSPs)
chr5 (10-189)||(32674939-32675117)
chr5 (10-189)||(3607817-3607996)
chr5 (10-188)||(30090232-30090410)
chr5 (10-189)||(20104973-20105151)
chr5 (69-189)||(12655261-12655381)
chr5 (69-189)||(23184046-23184166)
chr5 (69-189)||(23188313-23188433)
chr5 (69-189)||(34761307-34761427)
chr5 (69-189)||(39878141-39878261)
chr5 (126-172)||(38095505-38095551)
chr5 (123-172)||(37609741-37609790)
chr5 (126-172)||(16678759-16678805)
chr5 (191-252)||(32674791-32674852)
chr5 (133-172)||(38936314-38936353)
chr5 (191-252)||(16678908-16678969)
[»] scaffold0097 (4 HSPs)
scaffold0097 (10-189)||(48973-49152)
scaffold0097 (10-189)||(51796-51974)
scaffold0097 (69-189)||(40382-40502)
scaffold0097 (190-252)||(52060-52122)
[»] scaffold0642 (1 HSPs)
scaffold0642 (10-189)||(3440-3619)
[»] scaffold0345 (1 HSPs)
scaffold0345 (10-189)||(13352-13531)
[»] scaffold0105 (1 HSPs)
scaffold0105 (10-189)||(25450-25629)
[»] scaffold0374 (1 HSPs)
scaffold0374 (26-189)||(2012-2175)
[»] scaffold0119 (2 HSPs)
scaffold0119 (10-140)||(27936-28066)
scaffold0119 (10-140)||(34337-34467)


Alignment Details
Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 207968 - 207788
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  207968 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 207869  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  207868 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 207788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 1512994 - 1512815
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1512994 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 1512895  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1512894 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 1512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 40605590 - 40605411
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40605590 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 40605491  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40605490 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 40605411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 5013445 - 5013625
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5013445 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 5013544  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5013545 atgaacagtacacaaaaaagtcctacacattacgaaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 5013625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 26456128 - 26455948
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26456128 ataattctagtacgtagtttctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 26456029  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26456028 atgaacagtacacaaaaaagtactacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 26455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 13908482 - 13908303
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13908482 ataattctagtacgtagttcctgttactttaaaataatatataattttgaaagggaaattgaagtttgttgacatgcaaatagtttcaataagtaagaaa 13908383  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  13908382 atgaacagtacacaaaaaagtcctacacattacggaaaacttttctatagaccacatttgatgcaacatcgatatcatcg 13908303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 13905549 - 13905371
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13905549 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 13905450  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  13905449 atgaatagtacaca-aaaagtcctacatattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcg 13905371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 6123934 - 6123754
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  6123934 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaa 6123835  T
Q  110 atgaacagtacacaaaaaagtcc-tacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  6123834 atgaatagtacacaaaaaagtccttacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 6123754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 27997369 - 27997548
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27997369 ataattctaagacgcagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 27997468  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  27997469 atgaatagtacacaaaaaagttctacacattacggaaaacttctctgtagaccacatttgatgctacatcggtatcatcg 27997548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 28098739 - 28098918
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28098739 ataattctaagacgcagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 28098838  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  28098839 atgaatagtacacaaaaaagttctacacattacggaaaacttctctgtagaccacatttgatgctacatcggtatcatcg 28098918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 25647734 - 25647558
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25647734 ataattctagtacgtagttcctattactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 25647635  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |   |||||||||| ||||||||    
T  25647634 atgaatagtacacaaaaaagtcctacacattacggaaaacttttctgtagaccacact---tgcaacatcggtatcatcg 25647558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 36437521 - 36437694
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||| ||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  36437521 ataattctaagacgcagtttctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatacaaatagtttcaataagtaagaaa 36437620  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgata 183  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36437621 atgaatagtacacaaaaaagtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcgata 36437694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 1916687 - 1916867
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1916687 ataattctaagacgcagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 1916786  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| | |||||||||    
T  1916787 atgaatagtacacaaaaaagtcctacatattatggaaaacttctatgtagaccacatttgatgcaacattggtatcatcgt 1916867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 20890901 - 20890722
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||| ||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20890901 ataattctaagacgcagtttctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 20890802  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  20890801 atgaatagtacacaaaaatgtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 20890722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 2301039 - 2300863
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| | ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  2301039 ataattctagtacgtagttcctattactttaacaaaacatataattttaaaagggaaactgaagttcgttgatatgcaaatagtttcaataagtaagaaa 2300940  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |   |||||||||| ||||||||    
T  2300939 atgaatagtacacaaaaaagtcctacacattacggaaaacttttctgtagaccacact---tgcaacatcggtatcatcg 2300863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 35432053 - 35432232
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  35432053 ataattctaaaacgaagttcctgttactttaacataacatataattttaaaagggaaactaaagttcgttgacatgcaaatagtttcaataagtaagaaa 35432152  T
Q  110 atgaacagtacac-aaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  35432153 atgaatagtacacaaaaaaagtcctacacattatggaaaacttctctgtag-ccacatttgatgcaacatcgctatcatcg 35432232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 19822105 - 19821946
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaag 129  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  19822105 ctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatcagtaagaaaatgaatagtacacaaaaaag 19822006  T
Q  130 tcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  19822005 tcctacacattccggaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 19821946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 19842326 - 19842167
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaag 129  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  19842326 ctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatcagtaagaaaatgaatagtacacaaaaaag 19842227  T
Q  130 tcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  19842226 tcctacacattccggaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 19842167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 42109348 - 42109527
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||| ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  42109348 ataattctaagacgcagtttctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaa 42109447  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||    
T  42109448 atgaatagtacacaaaaaggtcctacacattacggaaaacttttttgtagaccacatttgatgcaacatcggtataatcg 42109527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 1273155 - 1273025
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  1273155 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagtttgttgacatgcatatagtttcaataagtaagaaa 1273056  T
Q  110 atgaacagtacacaaaaaagtcctacacatt 140  Q
    ||||| |||||||||||||||||||||||||    
T  1273055 atgaatagtacacaaaaaagtcctacacatt 1273025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 184295 - 184175
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  184295 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 184196  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  184195 gatgcaacatcggtatcatcg 184175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 2449529 - 2449409
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  2449529 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 2449430  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  2449429 gatgcaacatcggtatcatcg 2449409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 976023 - 976141
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    |||||||||||  |||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  976023 tgaagttcgtt--catgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 976120  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  976121 gatgcaacatcggtatcatcg 976141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 5013711 - 5013773
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5013711 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 5013773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 35432318 - 35432380
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35432318 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 35432380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 207703 - 207645
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaata 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  207703 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaata 207645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 1512729 - 1512667
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  1512729 taggagacggtaggtagacaccaacatgttctagcgactgaccctaactcttgttaatagtca 1512667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 21589022 - 21589069
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataatttt 57  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21589022 ataattctagtacgtagttcctgttactttaaaataacatataatttt 21589069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 23455689 - 23455735
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  23455689 aaagtcctacacattacggaaaaattctctgtagactacatttgatg 23455735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 13907842 - 13907781
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  13907842 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 13907781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 26455487 - 26455426
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | |||| |||||||||||||| |||||||||    
T  26455487 aggagacggtagataaacaccaacatgtttcaacgaccgaccctgactcttgttaatagtca 26455426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 26455862 - 26455801
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | |||| |||||||||||||| |||||||||    
T  26455862 aggagacggtagataaacaccaacatgtttcaacgaccgaccctgactcttgttaatagtca 26455801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 40605324 - 40605263
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||| ||||||| |||||||||    
T  40605324 aggagacggtagataaacaccaacatgtttcaacgactgaccctaactcttgttaatagtca 40605263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 13908216 - 13908156
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||| ||||||||||||||| |||||||||    
T  13908216 aggagacggtagataaacaccaacatgtttcaacga-tgaccctgactcttgttaatagtca 13908156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 45797 - 45618
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45797 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 45698  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45697 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 45618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 7893977 - 7893798
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7893977 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 7893878  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7893877 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 7893798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 26169064 - 26168885
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26169064 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 26168965  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26168964 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 26168885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 22007200 - 22007021
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22007200 ataattctggtacgtagttcctgttactttaaaataatatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 22007101  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22007100 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 22007021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 32660444 - 32660264
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32660444 ataattctagcacgtagttcctgttactataaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 32660345  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32660344 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcgtcgt 32660264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 32038663 - 32038484
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  32038663 ataattctagtacgtagttcctattactttaaaataacatataattttgaaggggaaattgaagttcgttgacatgcaaatactttcaataagtaagaaa 32038564  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32038563 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 32038484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 45116050 - 45115871
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45116050 ataattctagtacgtagttcctattactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 45115951  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  45115950 atgaatagtacacaaaaaagtcatacacattacggaaaacttctctatagaccacatttgatgcaacatcggtatcatcg 45115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 29956697 - 29956518
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||  |||| |||||||||| |||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29956697 ataattctagatcgtacttcctgttactttaacataacttataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 29956598  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29956597 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcg 29956518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 20955637 - 20955780
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20955637 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 20955736  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttct 153  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  20955737 atgaatagtacacaaaaaagtcctacacattacggaaaacttct 20955780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 27716163 - 27715985
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  27716163 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatcgtttcaataagtaagaaa 27716064  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  27716063 atgaatagtacaca-aaaagtcctacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 27715985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 17697135 - 17696956
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| |||||||    
T  17697135 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaa 17697036  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||    
T  17697035 atgaatagtacacaaaaaagtcctacacattacgggaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 17696956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 31100358 - 31100180
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31100358 ataattctagtacgtagttcctattactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 31100259  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||    
T  31100258 atgaatagtatacaaaaaagtcctacacattacggaaaacttatctgtagaccacatttg-tccaacatcggtatcatcg 31100180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 16720121 - 16719941
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| |||||||    
T  16720121 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaa 16720022  T
Q  110 atgaacagtacacaaaaaagtcc-tacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  16720021 atgaatagtacacaaaaaagtccttacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 16719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 30 - 183
Target Start/End: Original strand, 13398312 - 13398465
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaag 129  Q
    ||||||| |||| ||||||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  13398312 ctgttactttaacataacatataattttaaaagggaaactaaagttcgttgacatacaaatagtttcaataagtaagaaaatgaatagtacacaaaaaag 13398411  T
Q  130 tcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgata 183  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13398412 tcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcgata 13398465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 46909567 - 46909388
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  46909567 ataattctaagacgcagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgtaaatagtttcaataagtaagaaa 46909468  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| || |||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  46909467 atgaataggacacaaaaaa-tcctacacattatggaaaacttctatgtagaccacatttgatgcaacatcggtatcatcgt 46909388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 5093762 - 5093617
Alignment:
Q  38 ttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacac 137  Q
    |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| |||||    
T  5093762 ttaacataacatataattttaaaagggaaactgaagtacgttgacatgcaaatagtttcaataagtaagaaaatgaataatacaaaaaaaagtcatacac 5093663  T
Q  138 attacggaaaacttctctgtagaccacatttgatgcaacatcgata 183  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    
T  5093662 attacagaaaacttctttgtagaccacatttgatgcaacatcgata 5093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 7889028 - 7888909
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  7889028 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 7888929  T
Q  169 gatgcaacatcgatatcatc 188  Q
    |||||||||||| |||||||    
T  7888928 gatgcaacatcggtatcatc 7888909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 45115785 - 45115723
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45115785 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 45115723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 26168799 - 26168737
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  26168799 taggagacggtaggtagacaccaacatgttctagcgactgaccctaactcttgttaatagtca 26168737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 32660182 - 32660120
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  32660182 taggagacggtaggtagacaccaacatgttctagcgactgaccatgactcttgttaatagtca 32660120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 7893336 - 7893275
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  7893336 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 7893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 7893711 - 7893650
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  7893711 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 7893650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 22006560 - 22006499
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  22006560 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 22006499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 3595542 - 3595603
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||| |||| |||| |||||||||||  | ||||||||||||||||||| |||||||||    
T  3595542 aggagacagtagatagataccaacatgtttcaacgactgaccctgactcttgttaatagtca 3595603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 22006934 - 22006874
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||| ||||||||||||||| |||||||||    
T  22006934 aggagacggtagataaacaccaacatgtttcaacga-tgaccctgactcttgttaatagtca 22006874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 52682954 - 52682775
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52682954 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 52682855  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52682854 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 52682775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 28389624 - 28389444
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28389624 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 28389525  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28389524 atgaatagtacacaaaaaagtccaacacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgt 28389444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 30387908 - 30388088
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30387908 ataattctagcacgtagttcctgttactataaaataacatataattttgaaaggaaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 30388007  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30388008 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcgtcgt 30388088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 29359092 - 29359271
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29359092 ataattctagtacgtagttcctgttactttaaaataacatataattttggaaggcaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 29359191  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29359192 atgaacaatacacaaaaaagtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcgatatcatcg 29359271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 41859751 - 41859930
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41859751 ataattctagtacatagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 41859850  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  41859851 atgaacagtacacaaaaaagtcttacacattacgaaaaacttcactgtagaccacatttgatgcaacatcgatatcatcg 41859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 16909277 - 16909113
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16909277 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 16909178  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgca 174  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16909177 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgca 16909113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 188
Target Start/End: Complemental strand, 21382870 - 21382693
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21382870 ataattctagtatgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 21382771  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatc 188  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  21382770 atgaatagtacaca-aaaagtcctacacattacggaaaacttctctatagaccacatttgatgcaacatcggtatcatc 21382693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 19515106 - 19515285
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| |||||||    
T  19515106 ataattctagtacgtagttcctattactttaacataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaa 19515205  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||    
T  19515206 atgaatagtacacaaaaaagtcctacacattacgggaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 19515285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 21581496 - 21581675
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||| |||||||    
T  21581496 ataattctagtacgtagttcctattactttaacataacatataattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaa 21581595  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||    
T  21581596 atgaatagtacacaaaaaagtcctacacattacgggaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 21581675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 165
Target Start/End: Complemental strand, 25839539 - 25839384
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25839539 ataattctagtacgtagttcctattactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 25839440  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccaca 165  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25839439 atgaatagtacacaaaaaagtcctacacattacggaaaacttttctgtagaccaca 25839384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 42347960 - 42347780
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| ||||  |||||| |||| ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  42347960 ataattctaagacgcagtttttgttactttaacataacatataattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaa 42347861  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  42347860 atgaatagtacacaaaaaagtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgt 42347780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 38 - 189
Target Start/End: Complemental strand, 53288502 - 53288351
Alignment:
Q  38 ttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacac 137  Q
    |||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| |||||    
T  53288502 ttaacataacatataattttaaaagggaaactgaagtacgttgacatgcaaatagtttcaataagtaagaaaatgaataatacaaaaaaaagtcatacac 53288403  T
Q  138 attacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||| ||||    
T  53288402 attacagaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 53288351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 31448333 - 31448516
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttg--aaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaaga 107  Q
    |||||||||  ||| |||| || |||| |||| |||||||||||||||   ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  31448333 ataattctaagacgcagtttctattactttaacataacatataattttttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaaga 31448432  T
Q  108 aaatgaacagtacacaaaaaa--gtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||| |||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  31448433 aaatgaatagtacacaaaaaaagctcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 31448516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 21382606 - 21382544
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21382606 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 21382544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 28389359 - 28389297
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  28389359 taggagacggtaggtagacaccaacatgttctagcgaccgaccctgactcttgttaatagtca 28389297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 29359346 - 29359408
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  29359346 taggagacggtaggtagacaccaacatgttctagcgactgaccctcactcttgttaatagtca 29359408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 30388173 - 30388235
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  30388173 taggagacggtaggtagacaccaacatgttctagcgactgaccatgactcttgttaatagtca 30388235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 16909021 - 16908959
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  16909021 taggagacggtaggtagacaccaacatgttctagcgaccgaccttgactcttgttaatagtca 16908959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 8121162 - 8121116
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  8121162 aaagtgctacacattacggaaaacttctctgtagaccatatttgatg 8121116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 36895648 - 36895694
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||    
T  36895648 aaagtgctaaacattacggaaaacttctctgtagaccacatttgatg 36895694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 41860017 - 41860078
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  41860017 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 41860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 52682313 - 52682252
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  52682313 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 52682252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 26602405 - 26602451
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||    
T  26602405 aaagtgctacacattatagaaaacttctctgtagaccacatttgatg 26602451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 52682688 - 52682627
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||| ||||||||  | ||||||||||||||||||| |||||||||    
T  52682688 aggagacggtagataaacacgaacatgtttcaacgactgaccctgactcttgttaatagtca 52682627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 38655801 - 38655980
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38655801 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 38655900  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38655901 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 38655980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 26951741 - 26951562
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26951741 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 26951642  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26951641 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaatatcgatatcatcg 26951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 36087468 - 36087647
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36087468 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 36087567  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36087568 atgaacagtatacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 36087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 49562287 - 49562467
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49562287 ataattctagtacgtagttcttgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 49562386  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49562387 atgaacagtacacaaaaaagtcatacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 49562467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 35716543 - 35716363
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35716543 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 35716444  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  35716443 atgaacagtacacaaaaaagtcctacagattacggaaaacttctctgtaaaccacatttgatgcaacatcgatattatcgt 35716363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 18198937 - 18198758
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18198937 ataattctagtacgtagttcctgttacattaaaataacatataattttgaaagggaaattgaagtttgttgacatgcaaatagtttcaataagtaagaaa 18198838  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18198837 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcg 18198758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 36091306 - 36091485
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36091306 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaatttcgttgacatgcaaatagtttcaataagtaagaaa 36091405  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36091406 atgaacagtacacaaaaaagtcatacacattacggaaaacttctttgtagaccacatttgatgcaacatcgatatcatcg 36091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 854809 - 854630
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  854809 ataattctagtacgtagttcctattactttaaaataacatataattttgaaggggaaattgaagttcgttgacatgcaaatactttcaataagtaagaaa 854710  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  854709 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacattgatatcatcg 854630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 36947035 - 36947215
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36947035 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 36947134  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  36947135 atgaatagtacacaaaaaagtcctacacattacggaaaaattctctgtagaccacatttgatgcaacatcggtatcatcgt 36947215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 4594346 - 4594166
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  4594346 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagagaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 4594247  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4594246 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcgt 4594166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 13454761 - 13454940
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13454761 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 13454860  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  13454861 atgaatagtacacaaaaaagtcctacacattacgaaaaacttctctgtagaccacacttgatgcaacatcggtatcatcg 13454940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 16651652 - 16651476
Alignment:
Q  12 aattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaat 111  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16651652 aattctagtacgtagtacctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaat 16651553  T
Q  112 gaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatc 188  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16651552 gaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatc 16651476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 31487457 - 31487279
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31487457 ataattctagtatgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 31487358  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| ||||||||    
T  31487357 atgaatagtacaca-aaaagtcctacacattaccgaaaacttctcaatagaccacatttgatgcaacatcggtatcatcg 31487279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 52418673 - 52418852
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52418673 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 52418772  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || |||||    
T  52418773 atgaatagtacacaaaaaagtcctatacattacagaaaacttctctgtagaccacatttgatgcaacatcggtaccatcg 52418852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 12261062 - 12260882
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  12261062 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaa 12260963  T
Q  110 atgaacagtacacaaaaaagtcc-tacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  12260962 atgaatagtacacaaaaaagtccttacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 12260882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 12825434 - 12825255
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12825434 ataattttagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 12825335  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||| |||||| || |||||||| |||| |||||||||||||| ||||||||    
T  12825334 atgaatagtacacaaaaaagtcctacacattatggaaaatttatctgtagatcacacttgatgcaacatcggtatcatcg 12825255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 11826710 - 11826531
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||| ||||||| |||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  11826710 ataattctaagacgcagtttctgttactttaacataacatataattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 11826611  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  11826610 atgaatagtacacaaaaaagtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 11826531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 33003773 - 33003942
Alignment:
Q  20 tacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagta 119  Q
    |||| |||| ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  33003773 tacgcagtttctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagta 33003872  T
Q  120 cacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  33003873 cacaaaaaagtcatacacattacggaaaacttctttgtagaccatatttgatgcaacatcggtataatcg 33003942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 860069 - 859881
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  860069 ataattctaagacgcagttcctgttactttaacataacatataattttaaaagggaaattgaagttcgttgacatgcaaatagtttcaataaataagaaa 859970  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaactt---------ctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||| |||||||||||||||||||         || |||||||||||||||||||||||||| ||||||||    
T  859969 atgaatagtacacaaaaaagtcatacacattacggaaaacttctatgtagactatgtagaccacatttgatgcaacatcggtatcatcg 859881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 26948023 - 26947903
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  26948023 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 26947924  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  26947923 gatgcaacatcggtatcatcg 26947903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 31487193 - 31487131
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31487193 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 31487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 35716278 - 35716216
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35716278 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 35716216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 49562552 - 49562614
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49562552 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 49562614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 36947300 - 36947361
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36947300 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 36947361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 18198672 - 18198610
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  18198672 taggagacggtaggtagacaccaacatgttctagcgactgaccttgactcttgttaatagtca 18198610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 36087733 - 36087793
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  36087733 taggagacggtaggtagacaccaacatgttctagcgactgacccggactcttgttaatagt 36087793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 29864704 - 29864770
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttc 76  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||    
T  29864704 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttc 29864770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 38656066 - 38656128
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  38656066 taggagacggtaggtagacaccaacatgttctagcgactaaccctaactcttgttaatagtca 38656128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 52418937 - 52418999
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  52418937 taggaaacggtaggtagacaccaacatattctagcgactgaccctgacccttgttaatagtca 52418999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 47726837 - 47726776
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaata 91  Q
    ||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  47726837 ctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaata 47726776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 18256364 - 18256305
Alignment:
Q  113 aacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    |||| |||| || ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  18256364 aacactacaaaacaaagtgctacacattatggaaaacttctctgtagaccacatttgatg 18256305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 36006303 - 36006257
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||    
T  36006303 aaagtgctatacattacggaaaacttctctgtagaccacatttgatg 36006257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 26951100 - 26951039
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  26951100 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 26951039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 36091572 - 36091633
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  36091572 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 36091633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 18201327 - 18201268
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagt 250  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||    
T  18201327 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagt 18201268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 53521059 - 53521105
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||    
T  53521059 aaagtgctacacattaccaaaaacttctctgtagaccacatttgatg 53521105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 18256201 - 18256140
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| ||||||||||||| ||  |  |||||||||||||||||| |||||||||    
T  18256201 aggagacggtagatagacaccaacatttttcaaagactgaccctgactcttgttaatagtca 18256140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 26951475 - 26951414
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||| ||||||| |||||||||    
T  26951475 aggagacggtagataaacaccaacatgtttcaacgactgaccctaactcttgttaatagtca 26951414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 36091963 - 36092008
Alignment:
Q  207 acaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||||  | ||||||||||||||||||| |||||||||    
T  36091963 acaccaacatgtttcaacgactgaccctgactcttgttaatagtca 36092008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 2045127 - 2045306
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2045127 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 2045226  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2045227 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 2045306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 45503411 - 45503590
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45503411 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 45503510  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45503511 atgaacagtacacaaaaaagtcctacacattacggaaaacttctccgtagaccacatttgatgcaacatcgatatcatcg 45503590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 50709096 - 50708917
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50709096 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaaaaagtaagaaa 50708997  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  50708996 atgaatagtacacaaaaaagtcctacacattacagaaaacttctctgtagaccacatttgatgcaacatcggtatcatcg 50708917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 13926180 - 13926358
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13926180 ataattctattacgtagttcctgttacttttaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataaataagaaa 13926279  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatc 188  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  13926280 atgaatagtacacaaaaaagtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtatcatc 13926358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 10 - 188
Target Start/End: Complemental strand, 48651238 - 48651061
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48651238 ataattctagtatgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 48651139  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatc 188  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  48651138 atgaatagtacaca-aaaagtcctacacattacggaaaacttctctatagaccacatttgatgcaacatcggtatcatc 48651061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 2047378 - 2047557
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2047378 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 2047477  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||    
T  2047478 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagatcacacttgatgcaacattggtatcatcg 2047557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 36866789 - 36866968
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36866789 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 36866888  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||    
T  36866889 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagatcacacttgatgcaacattggtatcatcg 36866968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 38210872 - 38211051
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38210872 ataattctaagacgcagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 38210971  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  38210972 atgaacagtacacaaaaaagtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtatcatcg 38211051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 45501166 - 45501345
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||||||||||| |||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  45501166 ataattctaagacgcagttcctgttacattaacataacatataattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 45501265  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45501266 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcg 45501345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 29245675 - 29245496
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||  ||||||||||||  |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  29245675 ataattctagtatttagttcctgttattttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagttttaataagtaagaaa 29245576  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  29245575 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagatcacatttgatgcaacatcggtatcatcg 29245496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 49787237 - 49787412
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  49787237 ataattctagtacgtagttcctgttactttaacataacata--attttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatatgtaagaaa 49787334  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcat 187  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  49787335 atgaagagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcat 49787412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 39513149 - 39513313
Alignment:
Q  25 agttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaa 124  Q
    |||||||||||| |||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39513149 agttcctgttactttaacataacatataattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaacagtacacaa 39513248  T
Q  125 aaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  39513249 aaaagtcctacacattacggaaaacttatctgtagaccacatttgatgcaacatcggtatcatcg 39513313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 179
Target Start/End: Complemental strand, 26211874 - 26211706
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26211874 ataattctagtacgtagttcctgttactttaacataacatatcatttt-aaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 26211776  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatc 179  Q
    |||||  |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  26211775 atgaatggtacacaaaaaagtcctatacattacggaaaacttctttgtagaccacatttgatgcaacatc 26211706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 48960927 - 48960767
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaag 129  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  48960927 ctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaag 48960828  T
Q  130 tcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  48960827 tcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgt 48960767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 15691693 - 15691525
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| ||||  |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15691693 ataattctaagacgcagtttatgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 15691594  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacat 178  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  15691593 atgaatagtacacaaaaaagtcatacacattacggaaaacttctttgtacaccacatttgatgcaacat 15691525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 42496758 - 42496638
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  42496758 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 42496659  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||    
T  42496658 gatgcaacatcgatatcatcg 42496638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 7480674 - 7480554
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  7480674 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 7480575  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  7480574 gatgcaacatcggtatcatcg 7480554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 9534050 - 9533930
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  9534050 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 9533951  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  9533950 gatgcaacatcggtatcatcg 9533930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 29245410 - 29245348
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29245410 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 29245348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 39513399 - 39513461
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39513399 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 39513461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 45503676 - 45503738
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45503676 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 45503738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 50708831 - 50708769
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50708831 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 50708769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 48650974 - 48650912
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48650974 taggagacagtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 48650912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 38211137 - 38211199
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  38211137 taggagacagtaggtagacaccaacatgttctagcgattgaccctgactcttgttaatagtca 38211199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 13926444 - 13926503
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||| |||||||||   ||||||||||||||||||||||||||| |||||||||    
T  13926444 taggagacggtagatagacacca---tgttctagcgactgaccctgactcttgttaatagtca 13926503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 2045393 - 2045454
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  2045393 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 2045454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 21056912 - 21056874
Alignment:
Q  133 tacacattacggaaaacttctctgtagaccacatttgat 171  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  21056912 tacacattacggaaaacttctctgtagagcacatttgat 21056874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 35594010 - 35594071
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | |||||||| |||||||||| |||||||||    
T  35594010 aggagacggtagataaacaccaacatgtttcaacgactgactctgactcttgttaatagtca 35594071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 37891535 - 37891575
Alignment:
Q  132 ctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  37891535 ctacacattgcggaaaacttctttgtagaccacatttgatg 37891575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 8256871 - 8256825
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| ||||| |||||||||||||||||| ||||||| ||||||||    
T  8256871 aaagtgctacatattacggaaaacttctctttagaccatatttgatg 8256825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 37891682 - 37891740
Alignment:
Q  194 agacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||| ||||||||||||| ||  |  |||||||||||||||||| |||||||||    
T  37891682 agacggtagatagacaccaacatttttcaaagactgaccctgactcttgttaatagtca 37891740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 6e-92; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 14994359 - 14994537
Alignment:
Q  11 taattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaa 110  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14994359 taattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaa 14994458  T
Q  111 tgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14994459 tgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccatatttgatgcaacatcgatatcatcg 14994537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 22729765 - 22729945
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22729765 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaatttcgttgacatgcaaatagtttcaataagtaagaaa 22729864  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  22729865 atgaacagtacacaaaaaagtcctacacattacgtaaaacttttctgtagaccacatttgatgcaacatcgatatcatcgt 22729945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 19961849 - 19961670
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  19961849 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcagcaagtaagaaa 19961750  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  19961749 atgaatagtacacaaaaaagtcctacacattacagaaaacttctctgtagaccacatttgatgcaacatcggtatcatcg 19961670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 23827980 - 23827810
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23827980 ataattctagtacatagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 23827881  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcg 180  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23827880 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcatcatcg 23827810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 406042 - 406221
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  406042 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 406141  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  406142 atgaatagtacgcaaaaaagtcctacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 406221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 41376299 - 41376478
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41376299 ataattctagtacgtagttcttgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatattttcaataagtaagaaa 41376398  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||  |||||||    
T  41376399 atgaatagtacacaaaaaagtcctacacattacggaaaacttttctgtagatcacacttgatgcaacatcggcatcatcg 41376478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 18265880 - 18266056
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18265880 ataattctagtacgtagttcctattactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 18265979  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||| ||||||||    
T  18265980 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacact---tgcaacatcggtatcatcg 18266056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 18274893 - 18275069
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18274893 ataattctagtacgtagttccttttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 18274992  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||| ||||||||    
T  18274993 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacact---tgcaacatcggtatcatcg 18275069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 37983325 - 37983504
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||| ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  37983325 ataattctaagacgcagtttctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaa 37983424  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  37983425 atgaatagtacacaaaaaagtcatacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 37983504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 18492501 - 18492360
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaag 129  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  18492501 ctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaag 18492402  T
Q  130 tcctacacattacggaaaacttctctgtagaccacatttgat 171  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18492401 tcctacacattacggaaaacttctttgtagaccacatttgat 18492360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 24011736 - 24011914
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| |||| ||||||| |||| ||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  24011736 ataattctaaaacgcagtttctgttactttaacataacata--attttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaa 24011833  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  24011834 atgaatagtacacaaaaaagtcttacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgt 24011914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 21640100 - 21639991
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21640100 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 21640001  T
Q  110 atgaacagta 119  Q
    ||||||||||    
T  21640000 atgaacagta 21639991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 19961584 - 19961522
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19961584 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 19961522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 22730030 - 22730092
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  22730030 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttagtagtca 22730092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 23827724 - 23827662
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  23827724 taggagacggtaggtagacaccaacatgttctagcgaccgaccctgactcttgttaatagtca 23827662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 14994624 - 14994681
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaata 248  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||    
T  14994624 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaata 14994681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 37589538 - 37589477
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| |||| |||||||| ||  |  |||||||||||||||||| |||||||||    
T  37589538 aggagacggtagatagataccaacatttttcatagactgaccctgactcttgttaatagtca 37589477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 2281163 - 2280983
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2281163 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 2281064  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2281063 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcgt 2280983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 29371966 - 29372126
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaag 129  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29371966 ctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaag 29372065  T
Q  130 tcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcgt 190  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  29372066 tcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcgt 29372126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 29369411 - 29369570
Alignment:
Q  30 ctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaag 129  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29369411 ctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaag 29369510  T
Q  130 tcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  29369511 tcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcggtataatcg 29369570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 33004650 - 33004820
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| ||||  |||||| |||| ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  33004650 ataattctaagacgcagtttatgttactttaacataacatataattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaa 33004749  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcg 180  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33004750 atgaatagtacacaaaaaagtcctacacattacggaaaacttctttgtagaccacatttgatgcaacatcg 33004820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 24458879 - 24458711
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||  ||| ||||  |||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24458879 ataattctaagacgcagtttatgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 24458780  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacat 178  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  24458779 atgaatagtacacaaaaaagtcatacacattacggaaaacttctttgtacaccacatttgatgcaacat 24458711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 349382 - 349252
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  349382 ataattctagtacgtagttcctgttactttaatataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 349283  T
Q  110 atgaacagtacacaaaaaagtcctacacatt 140  Q
    ||||| |||||||||||||||||||||||||    
T  349282 atgaatagtacacaaaaaagtcctacacatt 349252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 33045718 - 33045838
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  33045718 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 33045817  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  33045818 gatgcaacatcggtatcatcg 33045838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 29924987 - 29924870
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  29924987 ataattctagtacgtagttcttgttactttaacataacatataattttaaaagggaaactgaaattcgttgacatgcaaatagtttcaataagtaagaaa 29924888  T
Q  110 atgaacagtacacaaaaa 127  Q
    ||||| ||||||||||||    
T  29924887 atgaatagtacacaaaaa 29924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 2280901 - 2280839
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  2280901 taggagacggtaggtagacaccaacatgttctagcgaccgaccctgactcttgttaatagtca 2280839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 25971021 - 25971080
Alignment:
Q  113 aacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    |||| |||| || ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25971021 aacactacaaaacaaagtgctacacattacggaaaacttctctctagaccacatttgatg 25971080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 25975461 - 25975520
Alignment:
Q  113 aacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    |||| |||| || ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25975461 aacactacaaaacaaagtgctacacattacggaaaacttctctctagaccacatttgatg 25975520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 3591179 - 3591120
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagt 250  Q
    |||||| ||||| || |||||||||||||  | ||||||||||||||||||| |||||||    
T  3591179 aggagatggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagt 3591120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 25971184 - 25971245
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||| ||||| ||||||||||||| ||  |  |||||||||||||||||| |||||||||    
T  25971184 aggagatggtagatagacaccaacatttttcaaagactgaccctgactcttgttaatagtca 25971245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 32675117 - 32674939
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32675117 ataattctagtacgtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 32675018  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32675017 atgaacagtacaca-aaaagtcctacacattatggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 32674939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 3607817 - 3607996
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3607817 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 3607916  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  3607917 atgaatagtacacaaaaaagtcctacacattacgaaaaacttctctgtagaccacacttgatgcaacatcggtatcatcg 3607996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 30090232 - 30090410
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30090232 ataattctagtacgtagtacctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 30090331  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatc 188  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  30090332 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatc 30090410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 20104973 - 20105151
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20104973 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 20105072  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  20105073 atgaatagtacac-aaaaagtcctacacattacggaaaacttctctgtagaccacacttgatgcaacatcggtatcatcg 20105151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 12655381 - 12655261
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  12655381 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 12655282  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  12655281 gatgcaacatcggtatcatcg 12655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 23184166 - 23184046
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  23184166 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 23184067  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  23184066 gatgcaacatcggtatcatcg 23184046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 23188433 - 23188313
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  23188433 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 23188334  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  23188333 gatgcaacatcggtatcatcg 23188313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 34761427 - 34761307
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  34761427 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 34761328  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  34761327 gatgcaacatcggtatcatcg 34761307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 39878261 - 39878141
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  39878261 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 39878162  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||| ||||||||    
T  39878161 gatgcaacatcggtatcatcg 39878141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 38095505 - 38095551
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  38095505 aaagtgctacacattacggaaaacttctctgtagaccacatttgatg 38095551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 37609790 - 37609741
Alignment:
Q  123 aaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37609790 aaaaaagtgttacacattacggaaaacttctctgtagaccacatttgatg 37609741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 16678759 - 16678805
Alignment:
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  16678759 aaagtgctacacattacgaaaaacttctctgtagaccacatttgatg 16678805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 32674852 - 32674791
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| || |||||||||||||  | ||||||||||||||||||| |||||||||    
T  32674852 aggagacggtagataaacaccaacatgtttcaacgactgaccctgactcttgttaatagtca 32674791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 38936314 - 38936353
Alignment:
Q  133 tacacattacggaaaacttctctgtagaccacatttgatg 172  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  38936314 tacacattacggaaaacttctctatagaccacatttgatg 38936353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 16678908 - 16678969
Alignment:
Q  191 aggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    |||||||||||| ||||||||||||| ||  |  |||||||||||||||||| |||||||||    
T  16678908 aggagacggtagatagacaccaacatttttcaaagactgaccctgactcttgttaatagtca 16678969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 160; Significance: 2e-85; HSPs: 4)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 48973 - 49152
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  48973 ataattctagtaggtagttcctgttactttaaaataacatataattttgaatgggaaattgaagttcgttgacatggaaatagtttcaataagtaagaaa 49072  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49073 atgaacagtacacaaaaaattcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 49152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 51796 - 51974
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51796 ataattctagtaagtagttcctgttactttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 51895  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    | ||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51896 acgaatagtacac-aaaaagtcctacacattacggaaaacttctctatagaccacatttgatgcaacatcgatatcatcg 51974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 40382 - 40502
Alignment:
Q  69 tgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacattt 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  40382 tgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctgtagaccacactt 40481  T
Q  169 gatgcaacatcgatatcatcg 189  Q
    |||||||||||||||||||||    
T  40482 gatgcaacatcgatatcatcg 40502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 52060 - 52122
Alignment:
Q  190 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgctaatagtca 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52060 taggagacggtaggtagacaccaacatgttctagcgactgaccctgactcttgttaatagtca 52122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 3619 - 3440
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  3619 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaa 3520  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  3519 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 3440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 13531 - 13352
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  13531 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaa 13432  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  13431 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 13352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 10 - 189
Target Start/End: Original strand, 25450 - 25629
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  25450 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaa 25549  T
Q  110 atgaacagtacacaaaaaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  25550 atgaatagtacacaaaaaagtcctacacattacggaaaacttctctgtagatcacacttgatgcaacatcggtatcatcg 25629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 2175 - 2012
Alignment:
Q  26 gttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaa 125  Q
    ||||||||||| |||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  2175 gttcctgttactttaacataacatataattctaaaagggaaactgaagttcgttgacatgcaaatagtttcaacaagtaagaaaatgaatagtatacaaa 2076  T
Q  126 aaagtcctacacattacggaaaacttctctgtagaccacatttgatgcaacatcgatatcatcg 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2075 aaagtgctacacattacggaaaacttctctgtagaccacatttgatgcaacatcggtatcatcg 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 27936 - 28066
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  27936 ataattctagtacgtagttcctgttactttaacataacatataattttaaaagggaaactgaagtttgttgacatgcatatagtttcaataagtaagaaa 28035  T
Q  110 atgaacagtacacaaaaaagtcctacacatt 140  Q
    ||||| |||||||||||||||||||||||||    
T  28036 atgaatagtacacaaaaaagtcctacacatt 28066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 34337 - 34467
Alignment:
Q  10 ataattctagtacgtagttcctgttaccttaaaataacatataattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaa 109  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34337 ataattctagtacgtagttcctgttactttaacataacatttaattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaa 34436  T
Q  110 atgaacagtacacaaaaaagtcctacacatt 140  Q
    ||||| ||||||||||||| |||||||||||    
T  34437 atgaatagtacacaaaaaactcctacacatt 34467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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