View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12922_low_15 (Length: 208)
Name: NF12922_low_15
Description: NF12922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12922_low_15 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 182; Significance: 1e-98; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4267289 - 4267096
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4267289 |
aagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcctcttcaactccaagacattttgc |
4267190 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4267189 |
ttcatcatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
4267096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4480702 - 4480895
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||| |||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||| | | |||||| |
|
|
| T |
4480702 |
aagcaagacctccttaatcactttgtccaagttcatgtatgaacaaccaccaggtcttgtgtcctcctctgccatcttcttcaactccatggccttttgc |
4480801 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
|||| | | ||||||||||||||||||| ||||||||||| |||| |||| || || |||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
4480802 |
ttcatcttctttcctttctctcccaccaacaattcattgattaacctctccacatcttctctcttcacattggtatcgatttcgagtccaatct |
4480895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 8 - 194
Target Start/End: Original strand, 4570988 - 4571174
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| ||||||||||||| |||| ||| || ||||||||||||| ||||| | ||||| | ||| | |
|
|
| T |
4570988 |
acctccttaatcactttttccaagttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcttcttcatctccattatatttttcctcatct |
4571087 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||| || ||||| || |||| |||||||||||| |||| |||||||| |||||||| |
|
|
| T |
4571088 |
tctttcctttatctcccaccatcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatct |
4571174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 4504520 - 4504383
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||| ||| |||||||| ||||| |||||||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||| | | |||||| |
|
|
| T |
4504520 |
aagcaagacgtccttaatcactttgtccaagttcatgtatgaacaaccaccaagtcttgtgtcctcctctgccttcttcttcaactccatggccttttgc |
4504421 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcatt |
138 |
Q |
| |
|
||| | | ||||||||||||||||||||||||||||| |
|
|
| T |
4504420 |
ctcatcttctttcctttctctcccaccatcaattcatt |
4504383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3171750 - 3171889
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||| |||||||| |||||| | ||| |||||||||||||||||||||| | | ||||| |
|
|
| T |
3171750 |
aagcaagacctccttaatcactttatccaagttcatgtatgaacaaccaccaaatcttgtatcctcctctgccttcttcttcaactccatggccctttgc |
3171849 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattga |
140 |
Q |
| |
|
||| | | |||||||||||||||||||||||||| |||| |
|
|
| T |
3171850 |
ctcatcttctttcctttctctcccaccatcaattcgttga |
3171889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 4585652 - 4585815
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| |||||||| ||||||||| |||| |||||||| |||| ||| || ||||||||||||||||| | | |||||| ||| | |
|
|
| T |
4585652 |
acctccttaatcactttttccaagtttatgtatgaacaacctccaggtctcgtgtcctcctccgccttcttcttcaactcgattgccttttgcctcatct |
4585751 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatt |
171 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||||| |
|
|
| T |
4585752 |
tctttccattctctcccaccatcaattcattgaccaacttctccacctcctctctcttcacatt |
4585815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 4256735 - 4256542
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||| |||| | || || ||||||| |||| |||||||||||| |||| ||| |||||| |
|
|
| T |
4256735 |
aagcatgacctccttaataactttgtccaagttcatcaatgaatgaccagctgggctggtgttcttctctgtcttcttcttcaattccatgaccttttgc |
4256636 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
||| | | |||||||| |||||| |||||||||||||| | ||||| || ||||||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
4256635 |
ctcatcttctttcctttttctcccgacatcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatct |
4256542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4469812 - 4470005
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||| ||| |||||||| ||||| ||||||||| ||||||||| ||| |||||||| || | ||| || |||||||||| ||||||| || |||| | |
|
|
| T |
4469812 |
aagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaactccatgatcttttcc |
4469911 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
||| | | ||||| |||||||| ||||||||||||||||||| |||||| || |||||||||||||||| | ||| |||||| |||||||||| |
|
|
| T |
4469912 |
ctcatcttctttccattctctccaaccatcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatct |
4470005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 4516337 - 4516505
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||| |||||| ||||||| |||||||||| ||| ||||||||||||||||| |||| | | |||||| ||| | |
|
|
| T |
4516337 |
acctccttaatcactttttccaagttcacatatgaacaaccacctggtcttgtgtcctcctctgccttcttcttcaattccatggccttttgcctcatct |
4516436 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtat |
176 |
Q |
| |
|
| |||||||| ||||||||||| |||||||||| | |||||| || || |||||||||||||| |||| |
|
|
| T |
4516437 |
tctttcctttatctcccaccattaattcattgatcagcttctccacctcctctctcttcacattggtat |
4516505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 4568072 - 4568258
Alignment:
| Q |
11 |
tccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgc---cttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| || ||||||||||||||| || ||||| ||||||||||||||||| | | |||||| ||| | |
|
|
| T |
4568072 |
tccttaatcactttgtccaagttcatgtatgaagaatcaccaggtcttgtgtccttctctgccttcttcttcttcaactccacggccttttgcctcatct |
4568171 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
| |||||||||| ||||||||| |||||||| | | |||||| || || ||||||||||||||||||| ||||||| ||| |||| |
|
|
| T |
4568172 |
tttttcctttctgtcccaccattaattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccgatct |
4568258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 4613822 - 4613671
Alignment:
| Q |
20 |
actttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcaccatatttcctttct |
119 |
Q |
| |
|
||||| ||||||||||| |||||| |||| || ||||| |||| ||| |||||||||||||||||||| | | |||||| ||| | |||||||||| |
|
|
| T |
4613822 |
actttgtccaagttcatatatgaacaacctcctggtctcgtgtcctcctctgccttcttcttcaactcaattgccttttgcctcattttctttcctttct |
4613723 |
T |
|
| Q |
120 |
ctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatt |
171 |
Q |
| |
|
|||||||||||||||||||||| | |||||| || ||||||||||||||||| |
|
|
| T |
4613722 |
ctcccaccatcaattcattgaccagcttctctacctcatctctcttcacatt |
4613671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 8 - 194
Target Start/End: Original strand, 4505873 - 4506059
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||| |||||||||||||||| | ||| | |||| |||| |||||||||| ||| |||| | ||| | |
|
|
| T |
4505873 |
acctccttaataactttgtccaagttcatgaatgaacaaccaccaggtcttgtatcctcctttgccctctttttcaactccatgacctttttcctcatct |
4505972 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
| |||||||||||||| ||||| | ||||| ||| | |||||| || | ||||| |||||||| |||| ||||||| |||||||| |
|
|
| T |
4505973 |
tgtttcctttctctccaaccataatttcatcgaccagcttctctacattttctctattcacattagtatcaatttcgattccaatct |
4506059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 4515237 - 4515051
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
|||||||| || ||||| |||||||||| ||||||| | || ||| |||| |||| ||| ||||||||||| |||||||||| || |||| | ||| |
|
|
| T |
4515237 |
acctccttgatcactttgtccaagttcaagtatgaagacccgccaagtctagtgtcctcgtctgccttctttttcaactccataacctttttcctcattt |
4515138 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||| || || || |||||||||||||| ||| |||||||| ||||||| |
|
|
| T |
4515137 |
tatttcctttctctcccaccatcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatct |
4515051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4461132 - 4461325
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||| ||| |||||||| ||||| ||||||||| ||||||||| ||| |||||||| || | ||| || |||||||||| || |||| ||| |||||| |
|
|
| T |
4461132 |
aagcaagacatccttaatgactttgtccaagttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaattccatgaccttttgc |
4461231 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
||| | | ||||| ||||||| ||||||||||| ||||| |||||||| || ||||| |||||||||| | ||| |||||| |||||||||| |
|
|
| T |
4461232 |
ctcatcttctttccaatctctccaaccatcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatct |
4461325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4622151 - 4622344
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| |||||||||| || || |||| |||||||||| ||||||||||| | | ||||| |
|
|
| T |
4622151 |
aagcatgacctccttaataactttgtccaagttgttgtatgaacaaccaccagggctggtcgtctcatctgccttctccttcaactccatggccttttgt |
4622250 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
||| | | |||||||| |||||| |||||||||||||| | ||| || || ||||| |||||||| ||||||||||||| |||||||| |
|
|
| T |
4622251 |
ctcatcttctttcctttatctcccgacatcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatct |
4622344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 4579448 - 4579632
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| | || |||||||| |||| ||| || |||||||||||||||| | | |||||| ||| | |
|
|
| T |
4579448 |
acctccttaatcactttctccaagttcatgtatgaacagcctccaggtctcgtgtcctcctccaccttcttcttcaactcaattgccttttgcctcatct |
4579547 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaat |
192 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| || | |||||| || || |||||||||||||| || | |||||| | |||||| |
|
|
| T |
4579548 |
tctttgctttctctcccaccatcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaattccaat |
4579632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4490478 - 4490339
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||||||| |||||||| ||||| |||||||||||||||||| |||||| |||| |||| ||| |||||||||||||||||||| | |||||| |
|
|
| T |
4490478 |
aagcatgacatccttaatcactttgtccaagttcatgtatgaactaccaccgagtctcgtgtcctccgctgccttcttcttcaactccgtcgccttttgc |
4490379 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattga |
140 |
Q |
| |
|
||| | | ||||||||||||||||||||||||||||||| |
|
|
| T |
4490378 |
ctcatcttctttcctttctctcccaccatcaattcattga |
4490339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 4617041 - 4617134
Alignment:
| Q |
11 |
tccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttca |
104 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||| | | |||||||||| |
|
|
| T |
4617041 |
tccttaataactttgttcaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaactccatggccttttgcttca |
4617134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 4592247 - 4592379
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
|||||||| || | ||| ||||||||||| |||||| |||| |||||||| |||||||| |||||||||||||||||||| | | |||| | ||| | |
|
|
| T |
4592247 |
acctccttgatcaatttgtccaagttcatatatgaacaacctccaggtctcgtgttctcctctgccttcttcttcaactcgattgcctttttcctcatct |
4592346 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattga |
140 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |
|
|
| T |
4592347 |
tctttcctttctctcccaccatcaattcattga |
4592379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 4557141 - 4557304
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||||||| ||||||||||||| |||| ||| || |||||| |||||| ||| | | |||| | || | |
|
|
| T |
4557141 |
acctccttaatcactttttccaaattcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcgtcttcatctcaattatctttttccacatct |
4557240 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatt |
171 |
Q |
| |
|
| ||||||||||| ||| |||||||||||||||| || ||||| || ||||||||||||||||| |
|
|
| T |
4557241 |
tctttcctttctccccctccatcaattcattgaccaaattctctacctcatctctcttcacatt |
4557304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 4457715 - 4457785
Alignment:
| Q |
113 |
cctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttc |
183 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| |
|
|
| T |
4457715 |
cctttttctcccaccatcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttc |
4457785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 4299856 - 4299676
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||| ||||||| || | |||||||| ||||||||| |||||| | ||||| ||| | |
|
|
| T |
4299856 |
acctccttaataactttgtccaagttcatgtacgaacaaccacctggattagtgttctcctctgccttc------aactcccttgccttttgtctcatct |
4299763 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| | ||| || || || |||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
4299762 |
tatctcctttctctcccaccatcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatct |
4299676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 194
Target Start/End: Original strand, 4560522 - 4560708
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| |||| |||||||| |||| | | || ||||| ||||||| ||||| | | |||||| ||| | |
|
|
| T |
4560522 |
acctccttaatcactttctccaagttcatgtatgaacaacctccaggtctcgtgtacacctccgcctttttcttcagctccatggccttttgcctcatct |
4560621 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
| |||||||| |||| ||||||||||||||| | ||||| ||||| || ||||| |||||||||| |||||| |||||||| |
|
|
| T |
4560622 |
tctttcctttatctcaggacatcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatct |
4560708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 194
Target Start/End: Complemental strand, 4260276 - 4260084
Alignment:
| Q |
2 |
agcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgct |
101 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||| ||||| ||||| || || |||||||| ||||||||| |||||||||||| ||| |||||| |
|
|
| T |
4260276 |
agcatgacctgcttaataactttgtccaagttcatcaatgaataaccagatggactggtgttctcctctgccttcctcttcaactccatgaccttttgcc |
4260177 |
T |
|
| Q |
102 |
tcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
||| | | ||||||| ||||| ||| | |||||||| | |||| | || |||||||| |||||||| ||||| ||||| | |||||||| |
|
|
| T |
4260176 |
tcatcttctttccttcttctcctgacataatttcattgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaatct |
4260084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4392149 - 4392063
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactc |
87 |
Q |
| |
|
||||| |||||||||||| | ||| |||||||||||| ||||| |||||||||||| ||||| ||| | |||||||||||||||||| |
|
|
| T |
4392149 |
aagcaagacctccttaatcagtttgtccaagttcatgaatgaagaaccaccaggtcatgtgtcctcctttgccttcttcttcaactc |
4392063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4492964 - 4493051
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactcc |
88 |
Q |
| |
|
||||| ||| ||||| || ||||| |||||||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||||||||| |
|
|
| T |
4492964 |
aagcaagacatccttgatcactttgtccaagttcatgtatgaacaaccaccaggtactgtgtcctcctctgccttctttttcaactcc |
4493051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 4601805 - 4601980
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||||||||| |||| |||| |||||||| ||||||| |||| ||| |||| | |||| ||||||||||||||| | | |||||| ||| | |
|
|
| T |
4601805 |
acctccttaataactttgtccaggttcttgtatgaacaaccacctagtctagtgctctcctttgccatcttcttcaactccatggccttttgcctcatct |
4601904 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttc |
183 |
Q |
| |
|
| || ||||| ||||| | |||| |||||||| | |||| | | || ||||||||||||||||||| |||||| |
|
|
| T |
4601905 |
tcttgcctttatctccggctatcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttc |
4601980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 4563727 - 4563902
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
|||||||| || ||||| |||||||||||||||||| |||| |||| ||| ||||| || || | |||||||||||||| | | |||||| || | |
|
|
| T |
4563727 |
acctccttgatcactttgtccaagttcatgtatgaacaacctccagctctcgtgttttcctccactttcttcttcaactcaattgccttttgccgcatct |
4563826 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttc |
183 |
Q |
| |
|
| |||||||||||||| ||||||||||||||| | ||||| || || |||||||| ||||| |||| |||||| |
|
|
| T |
4563827 |
tctttcctttctctcctgacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttc |
4563902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4625960 - 4626099
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||| ||| || ||||| | |||||||| |||||||||||| ||||||| || || ||||||| |||||||||||||||||||||| | | |||||| |
|
|
| T |
4625960 |
aagcaagacatcattaatcagtttatccatattcatgtatgaacaaccaccgggactaatgttctcctctgccttcttcttcaactccatggccttttgc |
4626059 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattga |
140 |
Q |
| |
|
||| | | ||||| || ||||| |||||||| |||||| |
|
|
| T |
4626060 |
ctcatcttctttccgttatctcctgccatcaatgcattga |
4626099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 4574324 - 4574499
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||||| |||| |||||||| |||| | | || |||||||||||| ||| | | | |||||| ||| | |
|
|
| T |
4574324 |
acctccttaatcactttctccaagtttgtgtatgaacaacctccaggtctcgtgtccacctccaccttcttcttcagctcaatggctttttgcctcatct |
4574423 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttc |
183 |
Q |
| |
|
| |||||||| ||||| ||||||||||||||| | ||||| || || || ||||| ||||| |||| |||||| |
|
|
| T |
4574424 |
tctttcctttatctccggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttc |
4574499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 4607007 - 4606958
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtct |
57 |
Q |
| |
|
|||| |||||| ||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
4607007 |
accttcttaatcactttttccaagttcatgtatgaaaaaccacctggtct |
4606958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 4598187 - 4598350
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||| |||| ||| |||| || | ||| || |||||| ||||||| || | |||||| ||| |
|
|
| T |
4598187 |
acctccttaatcactttctctaagttcatgtatgaacaacctccaagtctcgtttcctcctccgccttcatcttcaaatcaattgtcttttgcctcattt |
4598286 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatt |
171 |
Q |
| |
|
| |||||||| |||||| ||||||||| ||||| | |||||| || || |||||||||||||| |
|
|
| T |
4598287 |
tctttcctttatctcccgacatcaattcgttgaccagcttctccacctcctctctcttcacatt |
4598350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 24103008 - 24103201
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
24103008 |
aagcatgacctccttaataactttgtccaagttcatgtatgaaaaaccaccagatcttgtgttctcttctgccttcttcttgaactccaagaccttttgc |
24103107 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
|||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24103108 |
ttcatcgtctttccgttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatct |
24103201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 28000212 - 28000083
Alignment:
| Q |
11 |
tccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcaccatat |
110 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| ||||||| ||||| |||||||| |||||||| ||||||||||||| | | |||||| ||| | | | |
|
|
| T |
28000212 |
tccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgcctttttcttcaactccatggccttttgcctcatctttt |
28000113 |
T |
|
| Q |
111 |
ttcctttctctcccaccatcaattcattga |
140 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |
|
|
| T |
28000112 |
ttccattctctcccaccatcaattcattga |
28000083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 3835 - 3649
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||| | | |||||| ||| | |
|
|
| T |
3835 |
acctccttaataactttgtccaggttcatgtatgaacgaccacctggtctagtgttctcctctgccttcttctttaactccacggccttttgcctcatct |
3736 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||| |||||| || |||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
3735 |
tctttcctttctctcccaccgtcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatct |
3649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 3086429 - 3086622
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||| |||||||| ||||| |||||||||| |
|
|
| T |
3086429 |
aagcaagacctccttaataactttgtccaagttcatgtatgaacaaccaccgatactggtgttctcttctgctttcttctttaactctgcgacattttgc |
3086528 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatct |
194 |
Q |
| |
|
||| | | |||||||| |||||||||||||||||||||| | ||||||||| || |||||||||||||| |||| |||||| | |||||||| |
|
|
| T |
3086529 |
ctcatcttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatct |
3086622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 70; Significance: 9e-32; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 1674245 - 1674374
Alignment:
| Q |
11 |
tccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcaccatat |
110 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||| |||| | | |||||| ||| | | | |
|
|
| T |
1674245 |
tccttaatcactttgtccaagttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaattccatggccttttgcctcatctttt |
1674344 |
T |
|
| Q |
111 |
ttcctttctctcccaccatcaattcattga |
140 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |
|
|
| T |
1674345 |
ttccattctctcccaccatcaattcattga |
1674374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 16686281 - 16686220
Alignment:
| Q |
110 |
tttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatt |
171 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||| |
|
|
| T |
16686281 |
tttcctttctctcccaccatcaattcattgaccaatttctccacctcatctctcttcacatt |
16686220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 20863959 - 20863796
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgcttcacca |
107 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||| ||| | |||||||||| ||| |||||||||||||||||||| |||||| ||| | |
|
|
| T |
20863959 |
acctccttaatcactttgtccaagttcatatatgaaccaccttccggtcttgtgtcctcctctgccttcttcttcaactcatttgtcttttgcctcatcc |
20863860 |
T |
|
| Q |
108 |
tatttcctttctctcccaccatcaattcattgactaacttctcgacgtcatctctcttcacatt |
171 |
Q |
| |
|
| |||||||||||||||||||||||||||| || | | |||| || || |||||||| ||||| |
|
|
| T |
20863859 |
tccttcctttctctcccaccatcaattcatttaccagcatctccacctcctctctcttgacatt |
20863796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 16686383 - 16686334
Alignment:
| Q |
8 |
acctccttaataactttatccaagttcatgtatgaaaaaccaccaggtct |
57 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
16686383 |
acctccataatcactttttccaagttcatgtatgaacaaccaccaggtct |
16686334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4809 - 4670
Alignment:
| Q |
1 |
aagcatgacctccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactccaagacattttgc |
100 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||||| | ||||||| || |||||||| |||||||||||||||||||||| | | |||||| |
|
|
| T |
4809 |
aagcatgacctccttaatcactttgtccaagttcatgtatgaacagccaccagaactggtgttctcctctgccttcttcttcaactccatggccttttgc |
4710 |
T |
|
| Q |
101 |
ttcaccatatttcctttctctcccaccatcaattcattga |
140 |
Q |
| |
|
||| | | ||||||| |||||| |||||||||||||| |
|
|
| T |
4709 |
ctcatcttcattcctttatctcccgacatcaattcattga |
4670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 1281133 - 1281211
Alignment:
| Q |
11 |
tccttaataactttatccaagttcatgtatgaaaaaccaccaggtcttgtgttctcttctgccttcttcttcaactcca |
89 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||| ||||||| ||||| |||||||| || ||| ||||||||| |||| |
|
|
| T |
1281133 |
tccttaatcactttgtcgaagttcatgtatgaacaaccacccggtctagtgttctcctccgccgccttcttcaattcca |
1281211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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