View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12924_high_29 (Length: 246)
Name: NF12924_high_29
Description: NF12924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12924_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 5430111 - 5429883
Alignment:
| Q |
1 |
cttattcttcatgaaaacttcatttgttcagataaaaacaagaatcagtcatcaattaaagaagaaaatatgctcaagtgaacactaacataaaactaga |
100 |
Q |
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| T |
5430111 |
cttattcttcatgaaaacttcatttgttcagataaaaacaagaatcagtcgtcaattaaagaagaaaatatgctcaagtgaacactaacatataactaga |
5430012 |
T |
|
| Q |
101 |
gaaaagtactaataagaaattaatacagaacaaaaaacaaatatatataacatatgattaaaacatttcaacttgacataactaagttgttattttttgt |
200 |
Q |
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| T |
5430011 |
gaaaagtactaataagaaattaatacagaacaaaaaacaaatacatataacatatgattaaaacatttcaacttgacataactaagttgttattttttgt |
5429912 |
T |
|
| Q |
201 |
cttaaccctctggttcctacataaaggag |
229 |
Q |
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| T |
5429911 |
cttaaccctctggttcctacataaaggag |
5429883 |
T |
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