View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12926_low_9 (Length: 272)

Name: NF12926_low_9
Description: NF12926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12926_low_9
NF12926_low_9
[»] chr3 (37 HSPs)
chr3 (1-256)||(13769342-13769597)
chr3 (1-163)||(45443171-45443333)
chr3 (1-163)||(54368930-54369092)
chr3 (1-163)||(41380615-41380777)
chr3 (1-163)||(4255401-4255563)
chr3 (1-163)||(27219220-27219382)
chr3 (1-163)||(43101422-43101584)
chr3 (1-164)||(4256124-4256287)
chr3 (1-163)||(34715506-34715668)
chr3 (1-166)||(44573214-44573379)
chr3 (1-164)||(44573532-44573692)
chr3 (1-163)||(48685368-48685531)
chr3 (1-163)||(24860112-24860273)
chr3 (1-163)||(50203908-50204066)
chr3 (44-164)||(44573845-44573965)
chr3 (1-163)||(14170050-14170212)
chr3 (1-163)||(46139124-46139285)
chr3 (1-128)||(47833713-47833839)
chr3 (1-111)||(3985716-3985826)
chr3 (39-163)||(662619-662741)
chr3 (72-161)||(9658193-9658282)
chr3 (36-163)||(34250438-34250564)
chr3 (116-164)||(4255760-4255808)
chr3 (94-163)||(3985618-3985687)
chr3 (116-164)||(4255942-4255990)
chr3 (36-163)||(351072-351201)
chr3 (43-99)||(54861480-54861536)
chr3 (43-100)||(31603931-31603988)
chr3 (8-71)||(24539136-24539199)
chr3 (1-52)||(48511461-48511512)
chr3 (1-52)||(48511690-48511741)
chr3 (4-55)||(51734611-51734662)
chr3 (1-52)||(53966235-53966286)
chr3 (36-118)||(35035036-35035118)
chr3 (1-46)||(34992585-34992630)
chr3 (1-46)||(34992877-34992922)
chr3 (4-52)||(15820659-15820707)
[»] chr6 (33 HSPs)
chr6 (1-172)||(24055160-24055331)
chr6 (1-164)||(21067108-21067271)
chr6 (1-161)||(21043832-21043992)
chr6 (1-163)||(10733489-10733651)
chr6 (1-163)||(10418389-10418551)
chr6 (1-164)||(21088899-21089062)
chr6 (1-163)||(1744893-1745055)
chr6 (1-163)||(19054384-19054546)
chr6 (16-163)||(1408902-1409049)
chr6 (1-164)||(8143908-8144070)
chr6 (1-164)||(19753655-19753818)
chr6 (1-168)||(12134534-12134701)
chr6 (1-158)||(28068470-28068626)
chr6 (2-163)||(30539126-30539287)
chr6 (1-161)||(22889619-22889779)
chr6 (1-161)||(22911225-22911385)
chr6 (1-161)||(17096749-17096910)
chr6 (15-164)||(22874908-22875057)
chr6 (1-163)||(31924-32084)
chr6 (40-163)||(32215799-32215922)
chr6 (42-164)||(1205956-1206077)
chr6 (43-164)||(32216112-32216233)
chr6 (41-163)||(9602078-9602199)
chr6 (39-164)||(1205639-1205763)
chr6 (44-101)||(130761-130819)
chr6 (37-99)||(9156188-9156250)
chr6 (37-73)||(26809252-26809288)
chr6 (1-52)||(33396309-33396360)
chr6 (82-144)||(5252641-5252703)
chr6 (36-98)||(18286842-18286904)
chr6 (1-31)||(19712660-19712690)
chr6 (40-73)||(11160394-11160427)
chr6 (40-73)||(11198975-11199008)
[»] chr1 (47 HSPs)
chr1 (1-164)||(31305601-31305764)
chr1 (1-163)||(20735413-20735575)
chr1 (1-163)||(17419678-17419840)
chr1 (1-163)||(33879829-33879991)
chr1 (1-163)||(33964264-33964426)
chr1 (1-156)||(8520144-8520299)
chr1 (1-164)||(19937094-19937257)
chr1 (1-163)||(15013416-15013578)
chr1 (1-163)||(4022176-4022338)
chr1 (1-164)||(2697382-2697545)
chr1 (26-163)||(35926298-35926434)
chr1 (3-164)||(45264553-45264714)
chr1 (61-163)||(8520346-8520448)
chr1 (1-103)||(37600822-37600925)
chr1 (1-95)||(43423238-43423332)
chr1 (35-163)||(6868025-6868152)
chr1 (36-164)||(41590314-41590440)
chr1 (35-163)||(51515606-51515734)
chr1 (47-101)||(14623160-14623214)
chr1 (38-95)||(19459682-19459739)
chr1 (36-101)||(34626860-34626925)
chr1 (127-164)||(37600787-37600824)
chr1 (36-84)||(51188900-51188948)
chr1 (1-52)||(27958098-27958149)
chr1 (1-56)||(28509438-28509493)
chr1 (1-56)||(40642827-40642882)
chr1 (114-163)||(43423193-43423242)
chr1 (1-73)||(35892002-35892074)
chr1 (1-52)||(17294980-17295031)
chr1 (36-99)||(18998666-18998729)
chr1 (39-162)||(19811100-19811222)
chr1 (1-52)||(29228677-29228728)
chr1 (1-64)||(40664200-40664263)
chr1 (1-52)||(45443222-45443273)
chr1 (1-52)||(45858657-45858708)
chr1 (36-94)||(12410365-12410423)
chr1 (1-71)||(19696749-19696818)
chr1 (3-73)||(35024513-35024582)
chr1 (64-161)||(7465371-7465466)
chr1 (3-52)||(31411613-31411662)
chr1 (40-101)||(40566356-40566417)
chr1 (36-81)||(41590618-41590663)
chr1 (4-52)||(4187336-4187384)
chr1 (4-52)||(4187567-4187615)
chr1 (36-100)||(5087844-5087908)
chr1 (1-45)||(25799129-25799173)
chr1 (4-52)||(51722255-51722303)
[»] chr7 (57 HSPs)
chr7 (1-163)||(43167944-43168106)
chr7 (1-163)||(257318-257480)
chr7 (3-163)||(1663658-1663817)
chr7 (1-163)||(28909923-28910085)
chr7 (1-164)||(1661242-1661405)
chr7 (5-164)||(40121673-40121832)
chr7 (1-163)||(7135294-7135456)
chr7 (37-164)||(41670758-41670885)
chr7 (1-163)||(41670475-41670636)
chr7 (1-164)||(30296519-30296682)
chr7 (67-163)||(40122043-40122139)
chr7 (1-100)||(29780101-29780200)
chr7 (70-161)||(29780352-29780443)
chr7 (47-163)||(3973052-3973167)
chr7 (40-163)||(41709910-41710032)
chr7 (1-160)||(8584999-8585144)
chr7 (38-101)||(32000770-32000833)
chr7 (1-71)||(37272096-37272166)
chr7 (37-101)||(10406673-10406737)
chr7 (36-164)||(41389198-41389324)
chr7 (36-163)||(23721035-23721161)
chr7 (1-71)||(43288247-43288317)
chr7 (36-101)||(30610892-30610957)
chr7 (36-101)||(41387483-41387548)
chr7 (65-101)||(14092016-14092052)
chr7 (65-101)||(14402034-14402070)
chr7 (1-52)||(47346145-47346196)
chr7 (1-52)||(47346374-47346425)
chr7 (4-70)||(6960020-6960086)
chr7 (40-94)||(12305146-12305200)
chr7 (106-168)||(37272176-37272237)
chr7 (36-160)||(28358978-28359102)
chr7 (127-163)||(21033986-21034022)
chr7 (1-49)||(40121990-40122038)
chr7 (50-101)||(2689320-2689371)
chr7 (1-52)||(19843709-19843760)
chr7 (1-52)||(20296265-20296316)
chr7 (125-164)||(33582385-33582424)
chr7 (1-52)||(33909139-33909190)
chr7 (1-52)||(34748780-34748831)
chr7 (1-56)||(37530974-37531029)
chr7 (1-52)||(37755989-37756040)
chr7 (1-52)||(37756215-37756266)
chr7 (1-52)||(37761963-37762014)
chr7 (45-164)||(39079724-39079842)
chr7 (1-52)||(39550029-39550080)
chr7 (1-52)||(43384331-43384382)
chr7 (36-94)||(46870273-46870332)
chr7 (36-101)||(422747-422812)
chr7 (36-101)||(14092269-14092334)
chr7 (36-101)||(14402287-14402352)
chr7 (3-52)||(27585258-27585307)
chr7 (5-54)||(36092447-36092496)
chr7 (123-168)||(43288176-43288221)
chr7 (41-101)||(10193467-10193527)
chr7 (1-73)||(31149039-31149110)
chr7 (1-73)||(31167331-31167402)
[»] chr5 (38 HSPs)
chr5 (1-163)||(13843588-13843750)
chr5 (1-164)||(1028144-1028306)
chr5 (1-164)||(13843903-13844066)
chr5 (1-163)||(37995685-37995847)
chr5 (1-162)||(27759967-27760128)
chr5 (1-157)||(20811351-20811507)
chr5 (1-157)||(20837706-20837862)
chr5 (37-164)||(27760281-27760408)
chr5 (5-163)||(873751-873908)
chr5 (1-163)||(28010167-28010329)
chr5 (16-165)||(17016159-17016306)
chr5 (1-164)||(28009848-28010011)
chr5 (1-163)||(24918055-24918214)
chr5 (1-163)||(38131658-38131817)
chr5 (1-163)||(24993963-24994122)
chr5 (20-163)||(12595182-12595316)
chr5 (36-160)||(4796253-4796376)
chr5 (1-71)||(38663230-38663300)
chr5 (5-163)||(17435293-17435451)
chr5 (1-71)||(29432395-29432465)
chr5 (36-163)||(31973520-31973646)
chr5 (36-101)||(904839-904904)
chr5 (1-73)||(30588038-30588110)
chr5 (36-164)||(31973211-31973338)
chr5 (1-71)||(4464933-4465003)
chr5 (36-157)||(16275140-16275259)
chr5 (1-72)||(396241-396313)
chr5 (1-52)||(22196377-22196428)
chr5 (129-163)||(30588224-30588258)
chr5 (36-100)||(15844310-15844374)
chr5 (1-52)||(19439862-19439913)
chr5 (1-52)||(22196604-22196655)
chr5 (1-52)||(29396394-29396445)
chr5 (1-52)||(30329838-30329889)
chr5 (36-95)||(30587872-30587931)
chr5 (1-52)||(32395365-32395416)
chr5 (6-52)||(33040472-33040518)
chr5 (1-54)||(14769883-14769936)
[»] chr2 (34 HSPs)
chr2 (1-163)||(21214252-21214414)
chr2 (1-164)||(43195674-43195837)
chr2 (1-163)||(43169133-43169295)
chr2 (1-164)||(21213936-21214099)
chr2 (1-163)||(17509000-17509162)
chr2 (1-163)||(25441587-25441749)
chr2 (1-163)||(3977054-3977216)
chr2 (1-163)||(7877735-7877897)
chr2 (1-155)||(18901915-18902069)
chr2 (1-163)||(30166130-30166292)
chr2 (4-164)||(3976209-3976369)
chr2 (1-163)||(42768385-42768545)
chr2 (1-163)||(23054217-23054379)
chr2 (1-161)||(11968947-11969105)
chr2 (1-164)||(3976522-3976684)
chr2 (1-163)||(6183417-6183586)
chr2 (10-147)||(15820161-15820298)
chr2 (1-163)||(10849542-10849704)
chr2 (1-163)||(43688472-43688635)
chr2 (37-163)||(5424843-5424969)
chr2 (90-164)||(3976827-3976901)
chr2 (42-163)||(18183358-18183478)
chr2 (38-100)||(3003995-3004057)
chr2 (36-98)||(14522456-14522518)
chr2 (69-100)||(887738-887769)
chr2 (1-52)||(4506091-4506142)
chr2 (1-52)||(10862109-10862160)
chr2 (1-52)||(14280282-14280333)
chr2 (1-52)||(28193626-28193677)
chr2 (1-52)||(33532787-33532838)
chr2 (38-100)||(11339784-11339846)
chr2 (1-46)||(10542114-10542159)
chr2 (1-46)||(26847293-26847338)
chr2 (65-101)||(21373936-21373972)
[»] chr4 (56 HSPs)
chr4 (1-164)||(50858218-50858381)
chr4 (1-166)||(53740070-53740235)
chr4 (1-164)||(29669729-29669891)
chr4 (5-164)||(15665042-15665202)
chr4 (1-164)||(29669414-29669576)
chr4 (1-164)||(45426987-45427150)
chr4 (1-163)||(45427303-45427465)
chr4 (1-163)||(50857903-50858065)
chr4 (1-164)||(990929-991090)
chr4 (1-163)||(52214506-52214668)
chr4 (9-163)||(29734452-29734606)
chr4 (1-164)||(53738259-53738422)
chr4 (1-164)||(23018360-23018523)
chr4 (1-160)||(43971933-43972092)
chr4 (1-172)||(48843068-48843239)
chr4 (37-164)||(32988357-32988484)
chr4 (1-164)||(43972245-43972408)
chr4 (1-163)||(53739748-53739919)
chr4 (1-163)||(36558517-36558679)
chr4 (1-163)||(51469377-51469534)
chr4 (1-158)||(56509504-56509662)
chr4 (4-119)||(991139-991254)
chr4 (1-163)||(22866975-22867137)
chr4 (1-119)||(990482-990600)
chr4 (74-164)||(990731-990821)
chr4 (1-164)||(49544225-49544385)
chr4 (4-101)||(51470435-51470533)
chr4 (1-79)||(13254358-13254436)
chr4 (72-164)||(18862547-18862642)
chr4 (97-163)||(17222783-17222849)
chr4 (4-68)||(17222720-17222784)
chr4 (39-161)||(46332622-46332744)
chr4 (36-165)||(54595147-54595275)
chr4 (42-101)||(30491043-30491102)
chr4 (65-101)||(44898837-44898873)
chr4 (36-99)||(52043164-52043227)
chr4 (3-73)||(33385242-33385312)
chr4 (36-101)||(48046309-48046375)
chr4 (118-163)||(13254295-13254340)
chr4 (42-99)||(26942679-26942736)
chr4 (1-73)||(34206044-34206117)
chr4 (65-101)||(3137748-3137784)
chr4 (1-52)||(2016534-2016585)
chr4 (1-52)||(11290171-11290222)
chr4 (1-52)||(37097782-37097833)
chr4 (1-52)||(50868064-50868115)
chr4 (44-94)||(42788090-42788140)
chr4 (36-101)||(3137030-3137095)
chr4 (72-101)||(3137285-3137314)
chr4 (3-52)||(4026075-4026124)
chr4 (36-101)||(23311556-23311620)
chr4 (42-99)||(26942464-26942521)
chr4 (1-73)||(34206306-34206379)
chr4 (1-45)||(1923042-1923086)
chr4 (1-45)||(29113458-29113502)
chr4 (128-164)||(32784306-32784342)
[»] chr8 (33 HSPs)
chr8 (1-163)||(18905747-18905909)
chr8 (1-163)||(21085199-21085361)
chr8 (1-163)||(20298567-20298729)
chr8 (1-163)||(36997057-36997219)
chr8 (1-163)||(32931297-32931454)
chr8 (1-165)||(23027556-23027720)
chr8 (5-163)||(21653217-21653376)
chr8 (1-163)||(23027879-23028041)
chr8 (37-163)||(31766892-31767018)
chr8 (1-163)||(3183962-3184116)
chr8 (9-160)||(40754338-40754490)
chr8 (5-158)||(21653700-21653853)
chr8 (1-163)||(22277415-22277577)
chr8 (1-73)||(34248340-34248412)
chr8 (36-164)||(38886992-38887119)
chr8 (37-163)||(44933168-44933291)
chr8 (36-101)||(30590401-30590466)
chr8 (40-163)||(28488422-28488544)
chr8 (36-164)||(25971316-25971444)
chr8 (36-100)||(26639065-26639129)
chr8 (65-161)||(39590593-39590687)
chr8 (1-73)||(34248057-34248130)
chr8 (1-52)||(8276551-8276602)
chr8 (1-52)||(18464072-18464123)
chr8 (36-101)||(34529940-34530005)
chr8 (37-98)||(42369530-42369591)
chr8 (37-73)||(36994019-36994055)
chr8 (1-52)||(15711498-15711549)
chr8 (106-164)||(34248275-34248332)
chr8 (1-54)||(39587909-39587962)
chr8 (36-100)||(26642541-26642605)
chr8 (1-73)||(27402164-27402236)
chr8 (65-101)||(30005578-30005614)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-161)||(11078-11238)
[»] scaffold0099 (1 HSPs)
scaffold0099 (39-144)||(30602-30710)


Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 13769342 - 13769597
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13769342 tctttataaactcttctcaagagtgctatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 13769441  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacacctttcaatcactcactaaacactaccaaagctacag 200  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13769442 ctaaccaaaggttgcaatttaggcgactaggggcggaccgcaattaaagcggaatttccaacaccgttcaatcactcactaaacactaccaaagctacag 13769541  T
Q  201 aaactatgaagctatactcctcagattaggcatttccagtgtcggatacgtattat 256  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13769542 aaactatgaagctatactcctcagattaggcatttctagtgtcggatacgtattat 13769597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 45443333 - 45443171
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45443333 tctttataaactcttctcaagagtgctatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 45443234  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45443233 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 45443171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 54369092 - 54368930
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  54369092 tctttataaactcttctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 54368993  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54368992 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 54368930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41380777 - 41380615
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41380777 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 41380678  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||    
T  41380677 ctaaccaaaggtcgcaattaaggcgactaggggcgggccgcaattaaggcggaatttccaaca 41380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4255563 - 4255401
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  4255563 tctttataaattcttctcaagagtgctatccatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctacaatgaagg 4255464  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4255463 ctaaccaaaggtcccaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 4255401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27219382 - 27219220
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||    
T  27219382 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacgatgaaggtgttggaggctgcaattacgg 27219283  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27219282 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 27219220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43101422 - 43101584
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43101422 tctttataaactcttctcaagagtcctatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 43101521  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  43101522 ccaaccaaaggtcgcaatttaggcgactagggacggacctcaattaaggcagaatttccaaca 43101584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4256287 - 4256124
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||| ||||  ||  ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  4256287 tctttataaactcttctcaagagtgttatccatccgatgtgggactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaatgaagg 4256188  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  4256187 ctaaccaaaggttgcaatttaggcgactagggggggaccgcaattaaggcggaatttccaacac 4256124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34715506 - 34715668
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  34715506 tctttataaactcttctcaaaagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggctgcgatgaagg 34715605  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  34715606 ctaaccaaaggtcgcaatttaggcgactaggggcggaacgcaattaaggcggaatttcaaaca 34715668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 44573379 - 44573214
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  44573379 tctttataaactcttctcaagagtactatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 44573280  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacacct 166  Q
    |||| | |||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||    
T  44573279 ctaaccgaaggtcgcaatttaggcgactgggggcggatcgcaactaaggcggaatttccaacacct 44573214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 44573692 - 44573532
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| |  ||||| ||| ||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||| ||||    
T  44573692 tctttataaactcttctcaagatttttatctatcttatgtgggactaaatccaccccctcaaagccaacacaatg---gtgttggaggctgcaattaagg 44573596  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| | |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  44573595 ctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatctccaacac 44573532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 48685368 - 48685531
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccaccccctt-aaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    |||||||||||||||||||||||| |||| | ||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||     
T  48685368 tctttataaactcttctcaagagtactatatatccgatgtgggactaaatccacccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaa 48685467  T
Q  100 gctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
     |||| |||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  48685468 actaaccaaaggtcacaatttaggcgactagaggcggaccgcaattaaggcagaatttccaaca 48685531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24860112 - 24860273
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||| | ||  |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24860112 tctttataaactcttctcaagagtcctatttatccgatgtgg-actaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 24860210  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||| ||||||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  24860211 caaaccaaaggccgcaatttaggcaactaggggcggaccgcaataaaggcagaatttccaaca 24860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 50203908 - 50204066
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||  ||||| ||  ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50203908 tctttataaactcttctcaagagtcttatctatccgatgtgagactaaacccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 50204007  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||| ||||||| |||||||||||||||||||    ||||||||||||||||||    
T  50204008 ctaaccaaaggtcacaatttaggcgactaggggcggaccgc----aaggcggaatttccaaca 50204066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 44573965 - 44573845
Alignment:
Q  44 actaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaa 143  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||||    
T  44573965 actaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaa 44573866  T
Q  144 ttaaggcggaatttccaacac 164  Q
    ||||||||||||||| |||||    
T  44573865 ttaaggcggaatttctaacac 44573845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 14170050 - 14170212
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||| |||||||||||||| ||| | ||  ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  14170050 tctttataaaatcttctcaagagtgttatttatccgatgtgggactaaatccagcccctcaaagccaacacaatgaaggtgatggaggctgcaatgaagg 14170149  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||| | ||||||||| ||| |||||||||| ||||||| ||||||||| ||||||||    
T  14170150 caaaccaaatgccgcaatttaggcggctaggggcgggccgcaataaaggcggaacttccaaca 14170212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46139285 - 46139124
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||| |||||||||||| ||||| || ||||||| ||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||     
T  46139285 tctttataaacttttctcaagagtgttatctatccaatgtggaactaaattcaccccctcaaagccaacacaatgaagatgttggaggttgcaatgaaga 46139186  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| ||||  || ||||||| ||||||||||  ||||| ||||||||| |||||||||||||    
T  46139185 ctaaccaaatatcacaatttaggcgactagggatggacc-caattaaggtggaatttccaaca 46139124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 47833713 - 47833839
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||| |||||||||||| |||||| ||  ||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||| ||||    
T  47833713 tctttataaacacttctcaagagtcctatctatccgatgtgggactaaatccacccc-tcaaagccaacacaaggaaggtgttggtggctgcaattaagg 47833811  T
Q  101 ctaagcaaaggtcgcaatttatgcgact 128  Q
    |||| |||||||||||||||| ||||||    
T  47833812 ctaaccaaaggtcgcaatttaggcgact 47833839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 3985826 - 3985716
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||| |||  ||||| ||  ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  3985826 tctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggctgctatgaagg 3985727  T
Q  101 ctaagcaaagg 111  Q
    | || ||||||    
T  3985726 caaaccaaagg 3985716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 163
Target Start/End: Complemental strand, 662741 - 662619
Alignment:
Q  39 gtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggac 138  Q
    ||||||||||||| ||||| | ||| |||||||||| |||||||||||||||||||||||||| |  |||| | ||||| ||| ||||||||||||||||    
T  662741 gtgggactaaatcgaccccttcaaacccaacacaataaaggtgttggaggctgcaatgaaggcaacccaaatggcgcaa-ttaggcgactaggggcggac 662643  T
Q  139 cgcaattaaggcggaatttccaaca 163  Q
    ||||||| |||||||||||||||||    
T  662642 cgcaatt-aggcggaatttccaaca 662619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 9658282 - 9658193
Alignment:
Q  72 aatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    ||||||||||||||||||||||||||||| ||| ||||||  |||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  9658282 aatgaaggtgttggaggctgcaatgaaggttaaccaaaggctgcaatttaggcgactaggggctgacagcaattaaggcggaatttccaa 9658193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 34250438 - 34250564
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||||||||| |||| |||||| | ||| | |||||||| |||||||||||||||||||||||||| |  |||| ||||||| ||| ||| ||||| ||     
T  34250438 aatgtgggacgaaattcaccccttcaaacctaacacaattaaggtgttggaggctgcaatgaaggcaacccaaatgtcgcaa-ttaggcggctaggagct 34250536  T
Q  136 gaccgcaattaaggcggaatttccaaca 163  Q
    ||||||||||||||||||||||||||||    
T  34250537 gaccgcaattaaggcggaatttccaaca 34250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 4255808 - 4255760
Alignment:
Q  116 aatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4255808 aatttaggcgactaggggcggaccgcaattaaggcggaatttccaacac 4255760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 3985687 - 3985618
Alignment:
Q  94 atgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||||||| || |||||| ||||||| | |||||||||||||||| ||||||||||| ||||||||||||    
T  3985687 atgaaggcaaaccaaaggccgcaattaaggcgactaggggcggactgcaattaaggcagaatttccaaca 3985618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 4255990 - 4255942
Alignment:
Q  116 aatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  4255990 aatttaggcgactaggggcggaccgcaattaaggcggaattcccaacac 4255942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 351201 - 351072
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaagg---tgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggg 132  Q
    |||||||||||||| ||||||| | |||  ||||||||||||||   | ||| |||||||||| ||||| || |||| | ||||| ||| ||||||||||    
T  351201 aatgtgggactaaagccaccccttcaaactcaacacaatgaaggtattattgaaggctgcaattaaggcaaaacaaatgccgcaa-ttaggcgactaggg 351103  T
Q  133 gcggaccgcaattaaggcggaatttccaaca 163  Q
    | ||| |||||  ||||||||| ||||||||    
T  351102 gtggaacgcaacgaaggcggaaattccaaca 351072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 54861536 - 54861480
Alignment:
Q  43 gactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    ||||||||||||||| | | | ||||||||| |||||||||||||||||||||||||    
T  54861536 gactaaatccaccccttcacacccaacacaacgaaggtgttggaggctgcaatgaag 54861480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 31603988 - 31603931
Alignment:
Q  43 gactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||| |||||| ||||  |||||||||||||| |||||||||||||| ||||    
T  31603988 gactaaatccgccccctcaaaggtaacacaatgaaggttttggaggctgcaataaagg 31603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 24539199 - 24539136
Alignment:
Q  8 aaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacac 71  Q
    |||||||| ||||||||  |||||  || |||| |||||||||||||||||| |||||||||||    
T  24539199 aaactcttatcaagagtcttatctaactgatgtaggactaaatccaccccctcaaagccaacac 24539136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 48511461 - 48511512
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  48511461 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 48511512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 48511690 - 48511741
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  48511690 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 48511741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 51734611 - 51734662
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacc 55  Q
    ||||||||||||||||||| | |||||| ||  |||||||||||||||||||    
T  51734611 ttataaactcttctcaagaatcctatctatccgatgtgggactaaatccacc 51734662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 53966286 - 53966235
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  53966286 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 53966235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 35035118 - 35035036
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaat 118  Q
    |||||| |||||| |||||||| | ||| | |||||||||||||||||| ||| ||||| |||||| |  |||| ||||||||    
T  35035118 aatgtgagactaagtccaccccttcaaacctaacacaatgaaggtgttgaaggttgcaacgaaggcaactcaaatgtcgcaat 35035036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34992630 - 34992585
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggact 46  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||    
T  34992630 tctttataaactcttctcaagagtcttatctatctgatgtgggact 34992585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34992922 - 34992877
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggact 46  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||    
T  34992922 tctttataaactcttctcaagagtcttatctatctgatgtgggact 34992877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 15820659 - 15820707
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  15820659 ttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 15820707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 5e-71; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 24055160 - 24055331
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24055160 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 24055259  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacacctttcaat 172  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  24055260 ctaaccaaagggcgcaatttaggcgactaggggcggaccgcaattaaggcagaatttccaacacttttcaat 24055331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21067108 - 21067271
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| |||||||| ||  || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  21067108 tctttataaactcttctcaagaatgctatctatccgatatgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 21067207  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21067208 ctaaccaaaggtcacaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 21067271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 21043832 - 21043992
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  21043832 tctttataaactcttctcaagagtgctatctatccgatatgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 21043931  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  21043932 ctaaccaaaggtcacaatttatgcgactaggggcggaccgcaattaaggcagaatttccaa 21043992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10733489 - 10733651
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  10733489 tctttataaactcttctcaagagtgttatctgtccaatgtgggactaaatccaccccctcaaagccaacacaatgaagatgttggaggctgcaacgaagg 10733588  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  10733589 ctaaccaaaggtcgcaatttaggcgactagggacggactgcaattaaggcggaatttccaaca 10733651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10418389 - 10418551
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10418389 tctttataaactctcatcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 10418488  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| ||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||    
T  10418489 ctaaccaaagatcgcaattaaggcgactaggggcggaccgcaattaaggcggaaattccaaca 10418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21088899 - 21089062
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| |||||||| ||  || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  21088899 tctttataaactcttctcaagaatgctatctatccgatatgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 21088998  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||||    
T  21088999 ctaaccaaaggtcacaattaaggcgactaggggcggaccgcaattaaggcagaatttccaacac 21089062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1744893 - 1745055
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||| |||||||| |||||| || ||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  1744893 tctttataaactcttttcaagagtactatctatccaatgtgggactaactccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaagg 1744992  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||    
T  1744993 ctaaccaaaggtcgcaatttaggcgactggaggcggaccgcgattaaggcggaatttccaaca 1745055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19054546 - 19054384
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19054546 tctttataaactcttctcaagagtgttatctatccgatgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 19054447  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||| | |||||||||||| || ||||||||||||||||||| |||||    
T  19054446 ctaaccaaaggtcgcaattaaggcgactaggggctgatcgcaattaaggcggaattttcaaca 19054384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 1409049 - 1408902
Alignment:
Q  16 ctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgc 115  Q
    ||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  1409049 ctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagctaaccaaaggtcgc 1408950  T
Q  116 aatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  1408949 aatttaggcgacaaggggcggaccgcaattaaggcggaatttccaaca 1408902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8144070 - 8143908
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| | |||||||||||  |||||||||||||||||||||||||||    
T  8144070 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccacccc-tcaaagccaacacgttgaaggtgttggaggctgcaatgaagg 8143972  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  8143971 ctaaccaaaggccgcaattaaggcgactaggggcagaccgcaattaaggcggaatttccaacac 8143908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19753655 - 19753818
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| |   ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||    
T  19753655 tctttataaactcttctcaagagtcctatctataccatgtgggactaaatccaccccctcaaagctaacacaatgaaggtgttgcaggctgcaataaagg 19753754  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  19753755 ctaaccaaaggtcgcaatttaggcaactaggggcagaccgcaattaaggcggaatttccaacac 19753818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 12134534 - 12134701
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  12134534 tctttataaactcttctcaagagtgctatctatccgatgtgggactaagtccaccccgtcaaagccaacacaatgaaggtattggaggctgcaatgaagg 12134633  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacaccttt 168  Q
    | || |||||| ||||||||| | |||||||||||||||  ||| |||||||||||||||||| ||||    
T  12134634 caaaccaaaggccgcaatttaggtgactaggggcggaccagaataaaggcggaatttccaacaacttt 12134701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28068470 - 28068626
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||| || ||||||||||||| ||||| ||  ||||||||||||||||||||||| ||||||| || || |||||| ||||||| |||||||||||    
T  28068470 tctttatatacccttctcaagagtgttatctatccgatgtgggactaaatccaccccctcaaagccacca-aacgaaggttttggaggttgcaatgaagg 28068568  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttc 158  Q
    |||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  28068569 ctaaccaaaggtcacaatttaggcgactaggggcggaccgcatttaaggcggaatttc 28068626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 30539287 - 30539126
Alignment:
Q  2 ctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||| ||||||||  ||||| ||  |||||||||||||| |||||||| ||| |||||||||||| |||||||||| || ||||||||||    
T  30539287 ctttataaactcttatcaagagtcttatctatccgatgtgggactaaattcaccccctcaaaaccaacacaatgatggtgttggagtctacaatgaaggc 30539188  T
Q  102 taagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
     || ||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  30539187 aaaccaaaggctgcaatttaggcgactaggggcggaccgcaataaaggcggaatttccaaca 30539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22889619 - 22889779
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||| |||||| |||||||| ||| |||||| || |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  22889619 tcttaataaacacttctcaacagtcctatctatccaatgtgggacaaaatccagcccctcaaagccaacacaatgaaggtgttagaggctgtaatgaagg 22889718  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    | || |||||||||||||||| ||||||||||||| |||| ||| |||| |||||||||||    
T  22889719 caaaccaaaggtcgcaatttaggcgactaggggcgaaccgtaataaaggtggaatttccaa 22889779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22911225 - 22911385
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||| |||||| ||||| || ||| |||||| || |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  22911225 tcttaataaacacttcttaacagtcctatctatccaatgtgggacaaaatccagcccctcaaagccaacacaatgaaggtgttagaggctgtaatgaagg 22911324  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    | || |||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||    
T  22911325 caaaccaaaggtcgcaatttaggcgactaggggcggaccgtaataaaggtggaatttccaa 22911385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 17096749 - 17096910
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| | |||||| |   ||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| |    
T  17096749 tctttataaactcttctcaagactcctatctattcgatgtgagactaaatctatcccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaag 17096848  T
Q  101 ctaa-gcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    ||||  ||||||| |||||||| ||||||||||  |||||||| | ||||||||| ||||||    
T  17096849 ctaacccaaaggttgcaatttaggcgactagggatggaccgcagtaaaggcggaacttccaa 17096910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 22874908 - 22875057
Alignment:
Q  15 tctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcg 114  Q
    |||||| ||| |||||| ||  ||||||||| ||||||| ||||| |||||||||| |||||||||||| ||||||| ||||||||| || |||||||||    
T  22874908 tctcaacagtcctatctatccgatgtgggacaaaatccagcccctcaaagccaacataatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcg 22875007  T
Q  115 caatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    ||||||| |||||||||||| | ||| ||| |||| | ||||||||||||    
T  22875008 caatttaggcgactaggggcaggccgtaataaaggtgaaatttccaacac 22875057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31924 - 32084
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||| ||||||||  ||||| ||  |||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  31924 tctttataaactcttatcaagagtcttatctatccgatgttggactaaatccaccccctcaaagccaacaaaatgaaggtgttggagactgcaatgaagg 32023  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | |   ||| | ||||| ||| | ||||||||| ||| |||||| |||| |||||||||||||    
T  32024 caacttaaatgccgcaa-ttaggtgactaggggtgga-cgcaataaaggtggaatttccaaca 32084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 32215922 - 32215799
Alignment:
Q  40 tgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggacc 139  Q
    ||||||||||||||||| || ||| |||||| |||||||||||||||||||||||||||||| || |||||  | ||||||| |||||||| | ||||||    
T  32215922 tgggactaaatccaccctctcaaaaccaacataatgaaggtgttggaggctgcaatgaaggcaaaccaaagacctcaatttaagcgactagagacggacc 32215823  T
Q  140 gcaattaaggcggaatttccaaca 163  Q
     |||| ||| ||||||||| ||||    
T  32215822 acaataaagacggaatttctaaca 32215799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 1205956 - 1206077
Alignment:
Q  42 ggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgc 141  Q
    |||||||||||||||| | | | | ||||| ||||||||| ||||||||||||||||||| |  |||| | ||||| ||| ||| |||||||||||||||    
T  1205956 ggactaaatccaccccttcacacctaacacgatgaaggtgctggaggctgcaatgaaggcaacccaaatgccgcaa-ttaggcggctaggggcggaccgc 1206054  T
Q  142 aattaaggcggaatttccaacac 164  Q
    ||| ||||| |||||||||||||    
T  1206055 aatgaaggcagaatttccaacac 1206077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 32216233 - 32216112
Alignment:
Q  43 gactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgca 142  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||  | ||||||   ||||||| | ||||| || || ||||||    
T  32216233 gactaaatccaccccctaaaagcaaacacaatgaaagtgttggaggttgcaatgaaggcacaccaaaggctacaatttaggtgactaaggacgaaccgca 32216134  T
Q  143 attaaggcggaatttccaacac 164  Q
    || ||| ||||  |||||||||    
T  32216133 ataaagacggagcttccaacac 32216112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 9602078 - 9602199
Alignment:
Q  41 gggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccg 140  Q
    ||||||||||||||||| | | | |||||||||||||||||||||| |||| ||||||||| |  |||| |  |||| ||| ||| |||||||| ||| |    
T  9602078 gggactaaatccaccccttcacacccaacacaatgaaggtgttggaagctggaatgaaggcaatccaaatgctgcaa-ttaggcggctaggggcagactg 9602176  T
Q  141 caattaaggcggaatttccaaca 163  Q
    |||| |||| |||||||||||||    
T  9602177 caatgaaggtggaatttccaaca 9602199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 1205639 - 1205763
Alignment:
Q  39 gtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggac 138  Q
    |||||||| |||||||||| | | | ||||||||||||| |||||| |||||||||||||||  |  |||| | | ||| ||| ||| ||||||| ||||    
T  1205639 gtgggactgaatccaccccttcacacccaacacaatgaaagtgttgtaggctgcaatgaaggaaacccaaatgccacaa-ttaggcggctaggggtggac 1205737  T
Q  139 cgcaattaaggcggaatttccaacac 164  Q
     ||||| |||| ||||||||||||||    
T  1205738 tgcaatgaaggtggaatttccaacac 1205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 130761 - 130819
Alignment:
Q  44 actaaatccacccccttaaagccaacacaatgaaggt-gttggaggctgcaatgaaggc 101  Q
    |||||||||||||| | | | |||||||||||||||| |||||||||||||||||||||    
T  130761 actaaatccaccccttcacacccaacacaatgaaggttgttggaggctgcaatgaaggc 130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 9156188 - 9156250
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    |||||||| |||||||||||| | ||| | |||||| ||||||||||||||| ||||||||||    
T  9156188 atgtgggaataaatccaccccttcaaacctaacacagtgaaggtgttggaggatgcaatgaag 9156250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 26809252 - 26809288
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||||||||||||||||| |||||||||||||    
T  26809252 atgtgggactaaatccaccccctcaaagccaacacaa 26809288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33396360 - 33396309
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  33396360 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 33396309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 5252641 - 5252703
Alignment:
Q  82 ttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaat 144  Q
    |||||| |||||||||||||  | ||||||  |||||||| |||||||||||||||| |||||    
T  5252641 ttggagactgcaatgaaggcatatcaaaggctgcaatttaggcgactaggggcggactgcaat 5252703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 18286904 - 18286842
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaa 98  Q
    |||||||||||||||| ||||| | | | |||||||  ||||||||||||||| |||||||||    
T  18286904 aatgtgggactaaatcaaccccttcacacccaacacggtgaaggtgttggaggatgcaatgaa 18286842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 19712660 - 19712690
Alignment:
Q  1 tctttataaactcttctcaagagtgctatct 31  Q
    |||||||||||||||||||||||||||||||    
T  19712660 tctttataaactcttctcaagagtgctatct 19712690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 11160427 - 11160394
Alignment:
Q  40 tgggactaaatccacccccttaaagccaacacaa 73  Q
    |||||||||||||||||||| |||||||||||||    
T  11160427 tgggactaaatccaccccctcaaagccaacacaa 11160394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 11199008 - 11198975
Alignment:
Q  40 tgggactaaatccacccccttaaagccaacacaa 73  Q
    |||||||||||||||||||| |||||||||||||    
T  11199008 tgggactaaatccaccccctcaaagccaacacaa 11198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31305764 - 31305601
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31305764 tctttataaactcttctcaagagtgctatctatcggatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 31305665  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  31305664 ctaaccaaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcggaatttccaacac 31305601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20735575 - 20735413
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||| ||||||||||||| |||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20735575 tctttataaattcttctcaagagtactatctatctgatgtgggattaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 20735476  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  20735475 ctaaccaaaggtcgcaatttaggcgactaggggcagaccgcaattaaggcggaattttcaaca 20735413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17419840 - 17419678
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  17419840 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgtttgaggctgcaattaagg 17419741  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||| | |||||||||||| |||| |||||||||||||||||||||||    
T  17419740 ctaaccaaaggtcgcaattaaggcgactaggggcagaccacaattaaggcggaatttccaaca 17419678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 33879829 - 33879991
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  33879829 tctttataaactcttctcaagagtgctatatatctgatgtgggactaaatccaccctctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 33879928  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||||||||||||| | ||||||||| |||||||||| ||||||| ||||||||||    
T  33879929 caaaccaaaggtcgcaatttaggtgactaggggtggaccgcaataaaggcggtatttccaaca 33879991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33964426 - 33964264
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  33964426 tctttataaactcttctcaagagtgctatatatctgatgtgggactaaatccaccctctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 33964327  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||||||||||||| | ||||||||| |||||||||| ||||||| ||||||||||    
T  33964326 caaaccaaaggtcgcaatttaggtgactaggggtggaccgcaataaaggcggtatttccaaca 33964264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 8520144 - 8520299
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  8520144 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggggttggaggctgcaatgaagg 8520243  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatt 156  Q
    |||| |||||||||||||||| | ||||||||||  |||||||||||||| |||||    
T  8520244 ctaaccaaaggtcgcaatttaggtgactaggggcaaaccgcaattaaggcagaatt 8520299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19937094 - 19937257
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||    
T  19937094 tctttataaactcttctcaagaattctatctatccgatgtgggactaaatccaccccatcaaagccaacacaatgaaggtgttggaggatgcaattaagg 19937193  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||||||||||| |||| |||||||||||| |||||||||| |||||||||||||    
T  19937194 ctaaccaaaggtcgcaatttaggcgattaggggcggaccacaattaaggcagaatttccaacac 19937257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 15013578 - 15013416
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||| |||||||||||  ||||| |||||| || |||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  15013578 tctttataaactgttctcaagagtcatatctatctaatatgagactaaattcaccccctcaaagccaacacaatgaaggtgttggaggttgcaatgaagg 15013479  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
     ||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  15013478 ttaatcaaaggtcgcaatttaggcgactaggggcggaccgcaactaaggcagaatttccaaca 15013416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4022176 - 4022338
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||    
T  4022176 tctttataaactcttctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggttgcgacgaagg 4022275  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||| ||||||||| ||||| |||||||||||||||| |||||| |||||||||||    
T  4022276 caaaccaaaggccgcaatttaggcgacaaggggcggaccgcaataaaggcgaaatttccaaca 4022338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 2697382 - 2697545
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||     
T  2697382 tctttataaactcttctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccgtcacaatgaaggtgttggaggctgcaatgaaga 2697481  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    | || |||||| | ||||||| ||||||| ||| |||||||||| |||||||||||||||||||    
T  2697482 caaaccaaaggcctcaatttaggcgactaagggtggaccgcaataaaggcggaatttccaacac 2697545  T

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Target: chr1; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 35926298 - 35926434
Alignment:
Q  26 ctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcg 125  Q
    |||||| ||| ||||||||||||||| | ||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||    
T  35926298 ctatctatctgatgtgggactaaatcaaaccc-tcaaagccaacacaatgaaggtgttggaggttgcaatgaaggctaaccaaaggtcgcaatttaggcg 35926396  T
Q  126 actaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35926397 actaggggcggaccgcaattaaggcggaatttccaaca 35926434  T

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Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 45264714 - 45264553
Alignment:
Q  3 tttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggct 102  Q
    ||||||||||||| |||||||| |||||| |   | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||     
T  45264714 tttataaactcttatcaagagtcctatctattcgacgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaaagaaggca 45264615  T
Q  103 aagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    || |||||| ||||||||| ||||| |||||||||||||||| ||||| |||||||||||||    
T  45264614 aaccaaaggccgcaatttaggcgacaaggggcggaccgcaataaaggcagaatttccaacac 45264553  T

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Target: chr1; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 8520346 - 8520448
Alignment:
Q  61 aaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttcca 160  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  8520346 aaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaagcggaatttcca 8520445  T
Q  161 aca 163  Q
    |||    
T  8520446 aca 8520448  T

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Target: chr1; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37600925 - 37600822
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggct-gcaatgaag 99  Q
    ||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  37600925 tctttataaactcttctcaagagtgttatctatccaatgagggactaaatccacccccttaaagccagcgcaatgaaggtgttggaggctggcaatgaag 37600826  T
Q  100 gcta 103  Q
    ||||    
T  37600825 gcta 37600822  T

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Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43423332 - 43423238
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaat 95  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43423332 tctttataaactcttctcaagagtgttatctatccgatgtgggaataaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 43423238  T

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Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 6868152 - 6868025
Alignment:
Q  35 taatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggc 134  Q
    ||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||||| ||| ||| |  |||| |  |||| ||| |||| |||||||    
T  6868152 taatgtgggactaaatccaccccttcaaacccaacaaaatgaaggtgttggaggctgcagtgagggcaacccaaatgctgcaa-ttaggcgattaggggc 6868054  T
Q  135 ggaccgcaattaaggcggaatttccaaca 163  Q
     ||||||||| ||||||||||||||||||    
T  6868053 agaccgcaatgaaggcggaatttccaaca 6868025  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 41590314 - 41590440
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    ||||||| |||||| ||||||| | | | || |||||||||||||||||||||||||||||||||| || | ||   ||||| ||| ||| ||||| |||    
T  41590314 aatgtggaactaaacccaccccttcacacccgacacaatgaaggtgttggaggctgcaatgaaggc-aacccaattccgcaa-ttaggcggctaggtgcg 41590411  T
Q  136 gaccgcaattaaggcggaatttccaacac 164  Q
    ||||||||| |||||||||||| ||||||    
T  41590412 gaccgcaatgaaggcggaattttcaacac 41590440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 51515734 - 51515606
Alignment:
Q  35 taatgtgggactaaatccacccccttaa-agccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactagggg 133  Q
    |||||| |||||||||||||||| || | | ||||||||||||||||||||||||| ||||||||||| |  |||| | | ||| ||| ||| |||||||    
T  51515734 taatgtcggactaaatccacccctttcacacccaacacaatgaaggtgttggaggcagcaatgaaggcaatccaaatgccacaa-ttaggcggctagggg 51515636  T
Q  134 cggaccgcaattaaggcggaatttccaaca 163  Q
     |  ||||||| ||||||||| ||||||||    
T  51515635 agagccgcaatgaaggcggaaattccaaca 51515606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 14623214 - 14623160
Alignment:
Q  47 aaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||| ||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  14623214 aaattcacacccttacacccaacacaatgaaggtgttggaggctgcaatgaaggc 14623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 19459739 - 19459682
Alignment:
Q  38 tgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaat 95  Q
    |||||||||||| ||||||||| | | ||||||||||||||| |||||||||||||||    
T  19459739 tgtgggactaaacccaccccctcacacccaacacaatgaaggagttggaggctgcaat 19459682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 34626860 - 34626925
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||| |||||||||||| || | | | |||||| ||||||||||||||||||||||||||||||    
T  34626860 aatgtgagactaaatccactccttcacacccaacagaatgaaggtgttggaggctgcaatgaaggc 34626925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 37600824 - 37600787
Alignment:
Q  127 ctaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37600824 ctaggggcggaccgcaattaaggcggaatttccaacac 37600787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 51188900 - 51188948
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttg 84  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  51188900 aatgtgggactaaatccaccccttcaaacccaacacaatgaaggtgttg 51188948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27958098 - 27958149
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||||||| ||||||||||||    
T  27958098 tctttataaactcttctcaagaatcctatctatctaatgcgggactaaatcc 27958149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28509438 - 28509493
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccaccc 56  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||||||    
T  28509438 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccaccc 28509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40642827 - 40642882
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccaccc 56  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||||||    
T  40642827 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccaccc 40642882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 43423242 - 43423193
Alignment:
Q  114 gcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  43423242 gcaatttaggcgactaggggcggacaacaataaaggcggaatttccaaca 43423193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35892074 - 35892002
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||||||||| ||||||||  |||||    ||||| ||||||||| |||||||| |||||||||||||    
T  35892074 tctttataaactcttatcaagagttttatctaatcaatgtaggactaaattcaccccctcaaagccaacacaa 35892002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17295031 - 17294980
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  17295031 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 17294980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 18998729 - 18998666
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    |||||||||||||||||||||  | | | ||||||||  ||||||||||| |||||||||||||    
T  18998729 aatgtgggactaaatccaccctttcacacccaacacatcgaaggtgttggtggctgcaatgaag 18998666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 162
Target Start/End: Original strand, 19811100 - 19811222
Alignment:
Q  39 gtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggac 138  Q
    ||||||||||||||||  | | | | ||||||||| ||||| ||||||||||||||||||||| |  |||| | | ||| ||| ||| |||||||| |||    
T  19811100 gtgggactaaatccacatcttcacacccaacacaacgaaggagttggaggctgcaatgaaggcaacccaaatgccacaa-ttaggcggctaggggcagac 19811198  T
Q  139 cgcaattaaggcggaatttccaac 162  Q
    | |||| ||| | |||||||||||    
T  19811199 cacaatgaagactgaatttccaac 19811222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29228728 - 29228677
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  29228728 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 29228677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40664263 - 40664200
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaag 64  Q
    ||||||||||||||| |||||||| ||||||  |  ||||| ||||||||||||||||| ||||    
T  40664263 tctttataaactcttatcaagagtcctatctaaccgatgtgagactaaatccaccccctcaaag 40664200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45443273 - 45443222
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  45443273 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 45443222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45858708 - 45858657
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  45858708 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 45858657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 12410423 - 12410365
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaa 94  Q
    |||||||||||||||| || || | | | ||||||| ||||||||||||||||||||||    
T  12410423 aatgtgggactaaatcaactccttcacacccaacacgatgaaggtgttggaggctgcaa 12410365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19696749 - 19696818
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacac 71  Q
    ||||||||||||||| |||||||| |||||| ||| |||||| |||||||  | ||||| |||||||||||    
T  19696749 tctttataaactcttatcaagagtcctatctgtctgatgtggaactaaattta-cccctcaaagccaacac 19696818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 35024513 - 35024582
Alignment:
Q  3 tttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||| ||| |||||||| ||||||  | ||||||||||||| ||| |||||| |||||||||||||    
T  35024513 tttataaac-cttatcaagagtcctatctaaccaatgtgggactaattccgccccctcaaagccaacacaa 35024582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 7465466 - 7465371
Alignment:
Q  64 gccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    ||||||||||||| ||||||||||| ||| |||||||| |  ||| || ||||| ||| |||||||| ||||||  ||||| ||||| ||||||||||    
T  7465466 gccaacacaatga-ggtgttggagggtgcgatgaaggcaacccaatggccgcaa-ttaggcgactagaggcggaatgcaatgaaggcagaatttccaa 7465371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 31411613 - 31411662
Alignment:
Q  3 tttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||| |||||| | |||||| ||| ||||||||||||||||    
T  31411613 tttataaactcttttcaagaatcctatctatctgatgtgggactaaatcc 31411662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 40566356 - 40566417
Alignment:
Q  40 tgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||| |||||| ||| | | | |||||||||||||||||||||| |||| |||||||||    
T  40566356 tgggactgaatccatcccttcacacccaacacaatgaaggtgttggaagctgtaatgaaggc 40566417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 41590618 - 41590663
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtg 81  Q
    ||||||||||||||| |||||||| | | |||||||||||||||||    
T  41590618 aatgtgggactaaattcaccccctcacacccaacacaatgaaggtg 41590663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 4187336 - 4187384
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  4187336 ttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 4187384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 4187567 - 4187615
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  4187567 ttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 4187615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 5087844 - 5087908
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||| |||||| |||||||||| | | |  || |||||||||||||||||||| |||||||||||    
T  5087844 aatgagggactgaatccaccccttaatattcagcacaatgaaggtgttggaggttgcaatgaagg 5087908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25799173 - 25799129
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggac 45  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||    
T  25799173 tctttataaactcttctcaagagttttatctatctgatgtgggac 25799129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 51722303 - 51722255
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  51722303 ttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 51722255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43167944 - 43168106
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43167944 tctttataaactcttctcaagagtgctatctatccgatttgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 43168043  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43168044 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 43168106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 257318 - 257480
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| |  ||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  257318 tctttataaactcttctcaagaataatatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 257417  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  257418 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 1663658 - 1663817
Alignment:
Q  3 tttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggct 102  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  1663658 tttataaactcttctcaagagtgctatctatccgatgtgggactaaatccacccc-tcaaagccaacacaatgaaggtgttggaggctgcaatgaaggct 1663756  T
Q  103 aagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    || |||||| ||||||| | || ||||||||||||||||||||||||||||||||||||||    
T  1663757 aaccaaaggccgcaattaaggcaactaggggcggaccgcaattaaggcggaatttccaaca 1663817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28910085 - 28909923
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  28910085 tctttataaactcttcccaagagtcctatctatcttatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaag 28909986  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  28909985 caaaccaaagggcgcaatttaggcgactaggggcggaccacaataaaggcggaatttccaaca 28909923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1661242 - 1661405
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||  ||||| ||  ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  1661242 tctttataaactcttctcaagagttttatctatccgatgtgggactaaatccaccccgtcaaagccaacgcaatgaaggtgttggaggctgcaatgaagg 1661341  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||||||||||| || |||||||||| ||||| ||||||||||||||||||||||    
T  1661342 ctaaccaaaggtcgcaatttaggcaactaggggcgaaccgcgattaaggcggaatttccaacac 1661405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 40121673 - 40121832
Alignment:
Q  5 tataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaa 104  Q
    |||||||||||||||||||| |||||| ||  |||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  40121673 tataaactcttctcaagagtactatctatccgatgtggaactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaattaaggctaa 40121772  T
Q  105 gcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
     | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40121773 ccgaaggtagcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaacac 40121832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7135294 - 7135456
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||| ||||||||||||||||| |||||||||||||||||||   |||||| |||||||||||    
T  7135294 tctttataaactcttctcaagagtcctatctatccgatgtgtgactaaatccaccccctcaaagccaacacaatgaaggaaatggaggttgcaatgaagg 7135393  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  7135394 ctaaccaaaggtcgcaatttaggtgactaggggcggaccgcaattaaagcggaatttccaaca 7135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 37 - 164
Target Start/End: Complemental strand, 41670885 - 41670758
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcgg 136  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  41670885 atgtgggactaaatccaccccctcaaagccaacacaatgagggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcaactaggggcgg 41670786  T
Q  137 accgcaattaaggcggaatttccaacac 164  Q
    || |||||||||||||||||||||||||    
T  41670785 actgcaattaaggcggaatttccaacac 41670758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41670636 - 41670475
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| |   |||||||||||||||| |||| | ||||||||||||| |||||||||||||| |||||||||||    
T  41670636 tctttataaactcttctcaagagtactatctattcgatgtgggactaaatccgcccc-tcaaagccaacacaacgaaggtgttggaggatgcaatgaagg 41670538  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||| ||| |||||||||||||||||  ||||||||||||||||| ||||    
T  41670537 ctaaccaaaggtcgcaaattaggcgactaggggcggaccaaaattaaggcggaatttcaaaca 41670475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 30296682 - 30296519
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||| | ||||||||| ||||| ||| | |||||  |||||||| ||| | |||||||||||||||||||||||||  |||| |||||||     
T  30296682 tctttataaactcctatcaagagtgttatctatctgaagtgggtttaaatccaacccttcaaagccaacacaatgaaggtgttggttgctgtaatgaaga 30296583  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  30296582 ctaaccaaaggtcgcaatttaggcgactaggggcggatcacaattaaggcggaatttccaacac 30296519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 40122043 - 40122139
Alignment:
Q  67 aacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40122043 aacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcggaatttccaaca 40122139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 29780200 - 29780101
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||  ||||| | | ||||| |||||||||||| | || |||| |||||||||||||||||||||||||||||||||||    
T  29780200 tctttataaactcttctcaagagtcatatctatttgatgtgagactaaatccactctctcaaagtcaacacaatgaaggtgttggaggctgcaatgaagg 29780101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 29780443 - 29780352
Alignment:
Q  70 acaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    |||||||||||||||||||||||||||||||| ||  ||| | ||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  29780443 acaatgaaggtgttggaggctgcaatgaaggcaaactaaaagccgcaatttaggcgactaggggcggaccgcaataaaggtggaatttccaa 29780352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 3973167 - 3973052
Alignment:
Q  47 aaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaatta 146  Q
    ||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||| |  |||| || |||| ||| ||| ||||||| |||||||||| |    
T  3973167 aaatccaccccctcaaacccaacacgatgaaggtgttgaaggctgcaatgaaggcaacccaaatgttgcaa-ttaggcggctaggggtggaccgcaatga 3973069  T
Q  147 aggcggaatttccaaca 163  Q
    |||||||||||||||||    
T  3973068 aggcggaatttccaaca 3973052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 41710032 - 41709910
Alignment:
Q  40 tgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggacc 139  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | |   ||| |  |||| ||| ||||||||||||  |||    
T  41710032 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggttgcaatgaagacaacctaaatgctgcaa-ttaggcgactaggggcaaacc 41709934  T
Q  140 gcaattaaggcggaatttccaaca 163  Q
     |||| ||||||||||||||||||    
T  41709933 acaataaaggcggaatttccaaca 41709910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 8585144 - 8584999
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||| ||| || |||||||||| ||  ||||||||||||||||||||| | ||||||||||||||||         |||||||||| || |    
T  8585144 tctttataaactcctcttaatagtgctatctatccgatgtgggactaaatccaccccttcaaagccaacacaatga---------aggctgcaattaaag 8585054  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttcca 160  Q
    |||| ||||||| |||  |     ||||||||||||||||||||||||| ||||||||||    
T  8585053 ctaaccaaaggttgcagat-----gactaggggcggaccgcaattaaggtggaatttcca 8584999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 32000833 - 32000770
Alignment:
Q  38 tgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  32000833 tgtgggactaaatccatcccctcaaagccaacaccatgaaggtgttgaaggctgcaatgaaggc 32000770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37272096 - 37272166
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacac 71  Q
    ||||||||||||||| |||||||| ||||||  |  ||||||||||||||||||||||| |||||||||||    
T  37272096 tctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatccaccccctcaaagccaacac 37272166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 10406673 - 10406737
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||| ||||||| ||||| ||| |||||||||||| |||| |||||||||||||||||||||||    
T  10406673 atgtgagactaaacccaccgcctcaaagccaacacagtgaaagtgttggaggctgcaatgaaggc 10406737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 164
Target Start/End: Complemental strand, 41389324 - 41389198
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||||||||||||||||||||| | | | | ||||||||||||||||||  ||||||||||||| | || |||||| ||||| |||  || ||| ||||     
T  41389324 aatgtgggactaaatccaccccttcacacctaacacaatgaaggtgttgatggctgcaatgaagac-aatcaaaggccgcaa-ttagtcggctacgggca 41389227  T
Q  136 gaccgcaattaaggcggaatttccaacac 164  Q
    ||||||||| |||| | ||||||||||||    
T  41389226 gaccgcaatgaaggtgaaatttccaacac 41389198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 23721161 - 23721035
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||| ||||||||| ||||||| | ||  |||||||||||| | |||||||||||||||||||||| |  |||| | ||||| ||| | | ||||||| |    
T  23721161 aatgagggactaaacccaccccttcaagtccaacacaatgatgttgttggaggctgcaatgaaggcaacccaaatgccgcaa-ttaggtggctaggggag 23721063  T
Q  136 gaccgcaattaaggcggaatttccaaca 163  Q
    ||||||| | |||| |||||||||||||    
T  23721062 gaccgcattaaaggtggaatttccaaca 23721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43288317 - 43288247
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacac 71  Q
    ||||||||||||||| |||||||| ||||||  |  |||||||| |||||||||||||| |||||||||||    
T  43288317 tctttataaactcttatcaagagtcctatctaaccgatgtgggagtaaatccaccccctcaaagccaacac 43288247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 30610892 - 30610957
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||| || |||||||||||| |   | |||||||||||||||||||||||||||||||||||||    
T  30610892 aatgtgagattaaatccaccccttcccacccaacacaatgaaggtgttggaggctgcaatgaaggc 30610957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 41387548 - 41387483
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||| ||||||| | | | | |||||||||||||||||||||| ||||||||||||    
T  41387548 aatgtgggactaaacccaccccttcatacctaacacaatgaaggtgttggaggttgcaatgaaggc 41387483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 14092016 - 14092052
Alignment:
Q  65 ccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||||||||||||||||||||    
T  14092016 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14092052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 14402034 - 14402070
Alignment:
Q  65 ccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||||||||||||||||||||    
T  14402034 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14402070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47346145 - 47346196
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||||||||||    
T  47346145 tctttataaactcttctcaagattcctatctatctgatgtgggactaaatcc 47346196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47346374 - 47346425
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||||||  ||||||||||||||||    
T  47346374 tctttataaactcttctcaagattcctatctttccgatgtgggactaaatcc 47346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 6960020 - 6960086
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaaca 70  Q
    |||||||||||| |||||||| ||||||  |  |||||| |||||||||||||||| ||||||||||    
T  6960020 ttataaactcttatcaagagtcctatctaaccgatgtggaactaaatccaccccctcaaagccaaca 6960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 12305146 - 12305200
Alignment:
Q  40 tgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaa 94  Q
    |||||||||||||| ||  ||||| |||||||||||||||||||| |||||||||    
T  12305146 tgggactaaatccatccttttaaacccaacacaatgaaggtgttgaaggctgcaa 12305200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 37272176 - 37272237
Alignment:
Q  106 caaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacaccttt 168  Q
    |||| ||||||||| | ||||||||||| |||||||||| |||||||||||||||||| ||||    
T  37272176 caaatgtcgcaatt-aggcgactaggggtggaccgcaataaaggcggaatttccaacatcttt 37272237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 28359102 - 28358978
Alignment:
Q  36 aatgtgggactaaatccacccccttaa-agccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggc 134  Q
    ||||||||||| |||||||||  || | | |||| | |||||||||||||||||||||||||||||  |  |||| | ||||| |||   ||||||||||    
T  28359102 aatgtgggactgaatccacccatttcacacccaaaataatgaaggtgttggaggctgcaatgaaggaaacccaaatgccgcaa-ttagatgactaggggc 28359004  T
Q  135 ggaccgcaattaaggcggaatttcca 160  Q
    ||||| |||| || ||||||||||||    
T  28359003 ggaccacaatgaatgcggaatttcca 28358978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 21033986 - 21034022
Alignment:
Q  127 ctaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||||||||||||||||| ||||||||||||||||||    
T  21033986 ctaggggcggaccgcaatgaaggcggaatttccaaca 21034022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40121990 - 40122038
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaa 49  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||||||    
T  40121990 tctttataaactcttctcaagagtactatctatccgatgtgggactaaa 40122038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 2689320 - 2689371
Alignment:
Q  50 tccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||||||||||| ||||||||| |||||||| || ||| ||||||||||    
T  2689320 tccacccccttaaagtcaacacaataaaggtgtttgaagctacaatgaaggc 2689371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19843760 - 19843709
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||| || |||||||||||||    
T  19843760 tctttataaactcttctcaagaatcctatctatctgatttgggactaaatcc 19843709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20296316 - 20296265
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | || ||| || |||||||||||||||||    
T  20296316 tctttataaactcttctcaagaatcctctctatccaatgtgggactaaatcc 20296265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 33582385 - 33582424
Alignment:
Q  125 gactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  33582385 gactaggggcagaccgcaattaaggcagaatttccaacac 33582424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33909190 - 33909139
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  33909190 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 33909139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34748831 - 34748780
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  34748831 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 34748780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37530974 - 37531029
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccaccc 56  Q
    |||||||||||||||||||||| | |||||| ||  | ||||||||||||||||||    
T  37530974 tctttataaactcttctcaagaatcctatctatccgacgtgggactaaatccaccc 37531029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37755989 - 37756040
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  37755989 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 37756040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37756215 - 37756266
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  37756215 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 37756266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37761963 - 37762014
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  37761963 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 37762014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 39079724 - 39079842
Alignment:
Q  45 ctaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaat 144  Q
    ||||||||||||| | | | |||||||||||||||||||||||||||  |||||| | |  |||| | ||||| |||   | |||||||| |||||||||    
T  39079724 ctaaatccaccccttcacacccaacacaatgaaggtgttggaggctgtgatgaagacaactcaaatgccgcaa-ttagatggctaggggcagaccgcaat 39079822  T
Q  145 taaggcggaatttccaacac 164  Q
     |||||| ||||| ||||||    
T  39079823 gaaggcgaaattttcaacac 39079842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39550029 - 39550080
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  39550029 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 39550080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43384331 - 43384382
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  43384331 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 43384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 46870332 - 46870273
Alignment:
Q  36 aatgtgggactaaatccaccccctt-aaagccaacacaatgaaggtgttggaggctgcaa 94  Q
    ||||||||||||||||||||||||| | | || | |||||||| ||||||||||||||||    
T  46870332 aatgtgggactaaatccacccccttcacaccctaaacaatgaaagtgttggaggctgcaa 46870273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 422747 - 422812
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||||| ||||  |||||| | | | |||||||||||||||||||||| ||||||||| ||||    
T  422747 aatgtgggattaaagtcaccccttcacacccaacacaatgaaggtgttggaagctgcaatggaggc 422812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 14092269 - 14092334
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||| ||||||||| | | ||| ||||||||||||| |||| |||| ||| |||||    
T  14092269 aatgtgggactaaacccaccccctcacatccagcacaatgaaggtgatggaagctgaaattaaggc 14092334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 14402287 - 14402352
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||| ||||||||| | | ||| ||||||||||||| |||| |||| ||| |||||    
T  14402287 aatgtgggactaaacccaccccctcacatccagcacaatgaaggtgatggaagctgaaattaaggc 14402352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 27585307 - 27585258
Alignment:
Q  3 tttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  27585307 tttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 27585258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 36092447 - 36092496
Alignment:
Q  5 tataaactcttctcaagagtgctatctttctaatgtgggactaaatccac 54  Q
    |||||||||||||||||| |  ||||| || |||||||||||||||||||    
T  36092447 tataaactcttctcaagaatcatatctatccaatgtgggactaaatccac 36092496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 43288221 - 43288176
Alignment:
Q  123 gcgactaggggcggaccgcaattaaggcggaatttccaacaccttt 168  Q
    |||||||||||| || |||||| |||| ||||||||||||||||||    
T  43288221 gcgactaggggcagatcgcaataaaggtggaatttccaacaccttt 43288176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 10193467 - 10193527
Alignment:
Q  41 gggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||||| ||||||||| | |  ||||||||| |||| ||||||||||||||| |||||    
T  10193467 gggactaaacccaccccctcacacacaacacaataaaggagttggaggctgcaattaaggc 10193527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31149110 - 31149039
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||| ||||||||| || |||||  ||||| ||| |||| |||||||||||| ||||| |||||||||||||    
T  31149110 tctttgtaaactcttatcgagagtcttatctatctgatgtaggactaaatcca-cccctcaaagccaacacaa 31149039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31167402 - 31167331
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||| ||||||||| || |||||  ||||| ||| |||| |||||||||||| ||||| |||||||||||||    
T  31167402 tctttgtaaactcttatcgagagtcttatctatctgatgtaggactaaatcca-cccctcaaagccaacacaa 31167331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13843750 - 13843588
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13843750 tctttataaactcttctcaagagtactatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 13843651  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13843650 ctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 13843588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1028144 - 1028306
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  1028144 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgtagg 1028243  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| ||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  1028244 ctaaccaaaggttgcaatttaggcgactagggg-ggactgcaattaaggcggaatttccaacac 1028306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13844066 - 13843903
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  13844066 tctttataaactcttctcaagagtactatctatcagatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 13843967  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| | |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  13843966 ctaaccgaaggtcgcaatttaggcgactaggggcggaccacaattaaggtggaatttccaacac 13843903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 37995685 - 37995847
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  37995685 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctggaatgaagg 37995784  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  37995785 caaaccaaaggccgcaatttaggcgactaggggcagaccgcaataaaggcggaatttccaaca 37995847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27760128 - 27759967
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||| ||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  27760128 tctttagaaactcttctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaagtgttggaggctgcaatgaagg 27760029  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaac 162  Q
     ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  27760028 ttaaccaaaggtcgcaatttaggctactaggggaggaccgcaattaaggcggaatttccaac 27759967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20811507 - 20811351
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||| |||||||||||||| ||||| ||  | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20811507 tctttataaaatcttctcaagagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 20811408  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaattt 157  Q
    |||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  20811407 ctaaccaaaggtcggaatttaggcgactaggggcggaccgctattaaggcggaattt 20811351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20837862 - 20837706
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||| |||||||||||||| ||||| ||  | ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  20837862 tctttataaaatcttctcaagagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggatgctgcaattaagg 20837763  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaattt 157  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  20837762 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgctattaaggcggaattt 20837706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 37 - 164
Target Start/End: Complemental strand, 27760408 - 27760281
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcgg 136  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |    
T  27760408 atgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgaccaggggcag 27760309  T
Q  137 accgcaattaaggcggaatttccaacac 164  Q
    ||||||||||||||||||||||||||||    
T  27760308 accgcaattaaggcggaatttccaacac 27760281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 873751 - 873908
Alignment:
Q  5 tataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaa 104  Q
    |||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||    
T  873751 tataaactcttctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaaggcaaa 873850  T
Q  105 gcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
     |||||| ||||||||| || || |||||||||||||||| ||||||| ||||||||||    
T  873851 ccaaaggccgcaatttaggccac-aggggcggaccgcaataaaggcgggatttccaaca 873908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28010167 - 28010329
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||| | |||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  28010167 tctttattagctcttctcaagagttctatctatcctatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaagg 28010266  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | |  |||||| ||||||||| | |||||||||| ||||||||| ||||||||||||||||||    
T  28010267 caagccaaaggccgcaatttaggtgactaggggcagaccgcaataaaggcggaatttccaaca 28010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 17016159 - 17016306
Alignment:
Q  16 ctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgc 115  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| |||| |||||    
T  17016159 ctcaagagtcctatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctataatgaaggctaaccaaaagtcgc 17016258  T
Q  116 aatttatgcgactaggggcggaccgcaattaaggcggaatttccaacacc 165  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||    
T  17016259 aatttaggc-acta-gggcggaccgcaattaaggcggaatttccaacacc 17016306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 28009848 - 28010011
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||||||    
T  28009848 tctttataaactcttctcaagagttctatctatctgatgtgggactaaatccacgccctcaaagccaacacaaagaaggtgtttgaggctgcaatgaagg 28009947  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    | |  |||| |  ||| |||| |||||||||||| ||| |||||||||||||||||||||||||    
T  28009948 caagccaaatgctgcagtttaggcgactaggggcagactgcaattaaggcggaatttccaacac 28010011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24918214 - 24918055
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||| || |||||| |||   ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  24918214 tctttataaactcttctcaagcgtcctatctatct---gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaagg 24918118  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||| ||| ||||||| |||| ||||||||||||||||| ||||||||||||| ||||    
T  24918117 caaaccaaatgtcacaatttaggcgattaggggcggaccgcaatgaaggcggaatttcgaaca 24918055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38131817 - 38131658
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||||||||||| |||| |||||||||||||||   ||||||||||||||||||||||    
T  38131817 tctttataaactcttctcaagagtcctatctatccgatgtgggactaaatccactccctcaaagccaacacaatg---gtgttggaggctgcaatgaagg 38131721  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||| | |||||||  ||||||||||||||||||||| ||||| ||||||||||||    
T  38131720 ccaaccaaaggccacaatttagacgactaggggcggaccgcaataaaggcagaatttccaaca 38131658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24994122 - 24993963
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||  | |||| | |||   ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  24994122 tctttataaactcttctcaagcatcctatttatct---gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaagg 24994026  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
      || |||| ||||||||||| |||| ||||||||||||||||| |||| |||||||| ||||    
T  24994025 taaaccaaatgtcgcaatttaggcgattaggggcggaccgcaataaaggtggaatttcgaaca 24993963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 12595182 - 12595316
Alignment:
Q  20 agagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatt 119  Q
    |||||| ||||| ||  ||||||||||||||||||||||| |||||||||||||||||||         |||||||||||||||| |||| |||| ||||    
T  12595182 agagtgttatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaagg---------ctgcaatgaaggctaaccaaaagtcgaaatt 12595272  T
Q  120 tatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  12595273 taggcgactaggggcggaccgcaattaaggcggaatttccaaca 12595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 4796376 - 4796253
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||||| ||||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| |  |||| |  |||| ||||||| |||||||||    
T  4796376 aatgtgtgactaaatccaccccttcacacccaacacaatgaaggtgttggaggctgcaatgaaggcaacccaaatgctgcaa-ttatgcggctaggggcg 4796278  T
Q  136 gaccgcaattaaggcggaatttcca 160  Q
    | ||||||| |||||||||||||||    
T  4796277 ggccgcaatgaaggcggaatttcca 4796253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38663300 - 38663230
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacac 71  Q
    ||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||| |||||||||||    
T  38663300 tctttataaactcttatcaagagtcctatcttactgatgtgggactaaatccaccccctcaaagccaacac 38663230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 17435293 - 17435451
Alignment:
Q  5 tataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaa 104  Q
    |||||||||||||||| |||  ||||| ||  |||| ||||| ||| || |||||  | ||||||||||||||||||||||||| |||||||||| | ||    
T  17435293 tataaactcttctcaaaagttttatctatccgatgtaggactgaatgcatcccctcgatgccaacacaatgaaggtgttggaggttgcaatgaagacaaa 17435392  T
Q  105 gcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
     |||| | | ||||||| |||| ||  || ||||| |||| ||||| ||||||||||||    
T  17435393 ccaaatgcctcaatttaggcgattaatggtggaccacaataaaggctgaatttccaaca 17435451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29432465 - 29432395
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacac 71  Q
    ||||||||||||||| |||||||| ||||||  | |||||||||||||||||||||||| |||||||||||    
T  29432465 tctttataaactcttatcaagagtcctatctaaccaatgtgggactaaatccaccccctcaaagccaacac 29432395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 31973520 - 31973646
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||||||||||||||||||||  | | | ||||||||||||||||||||||||||||||| ||||| |  |||| | | ||| ||| ||| |||||||||    
T  31973520 aatgtgggactaaatccaccctttcacacccaacacaatgaaggtgttggaggctgcaataaaggcaactcaaatgcctcaa-ttaggcggctaggggcg 31973618  T
Q  136 gaccgcaattaaggcggaatttccaaca 163  Q
    || ||| |  |||| |||||||||||||    
T  31973619 gatcgcgaggaaggaggaatttccaaca 31973646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 904839 - 904904
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||||| | |||| ||||||||||||||  ||| ||||||||||||||||    
T  904839 aatgtgggactaaatccaccccttcaaaggcaacacaatgaagggcttgaaggctgcaatgaaggc 904904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30588110 - 30588038
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||||||||| |||||||| ||||||  |  ||||||||||||||||||||||| |||||||| ||||    
T  30588110 tctttataaactcttatcaagagttctatctaaccgatgtgggactaaatccaccccctcaaagccaatacaa 30588038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 31973211 - 31973338
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||| ||||||||||||||||| | ||| ||||||||| |||||||||||||  | |||||||||  |  |||| | ||||| ||| ||| || ||||||    
T  31973211 aatgagggactaaatccaccccttcaaacccaacacaacgaaggtgttggagatttcaatgaaggaaacccaaatgccgcaa-ttaggcggctgggggcg 31973309  T
Q  136 gaccgcaattaaggcggaatttccaacac 164  Q
    ||| ||||| ||||| |||||||||||||    
T  31973310 gactgcaatgaaggcagaatttccaacac 31973338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4464933 - 4465003
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacac 71  Q
    ||||||||||||||| |||||||| || |||  | || ||||||||||||||||||||| |||||||||||    
T  4464933 tctttataaactcttatcaagagtcctttctaacaaacgtgggactaaatccaccccctcaaagccaacac 4465003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 16275259 - 16275140
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||||||||||||||||||||| | | | ||||||||||||||||   |||||||||||||||||| |  |||| | ||||| | | | | ||||||| |    
T  16275259 aatgtgggactaaatccaccccttgacatccaacacaatgaaggt-acggaggctgcaatgaaggcaacccaaatgccgcaa-tcaggtggctaggggtg 16275162  T
Q  136 gaccgcaattaaggcggaattt 157  Q
    ||||||||| ||||||||||||    
T  16275161 gaccgcaatgaaggcggaattt 16275140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 396313 - 396241
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccac-ccccttaaagccaacaca 72  Q
    |||||||||| |||| |||||||| |||||| |  ||||||||||||||||||| ||||| ||||||||||||    
T  396313 tctttataaagtcttatcaagagtcctatctattcaatgtgggactaaatccacccccctcaaagccaacaca 396241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22196377 - 22196428
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||    
T  22196377 tctttataaactcttctcaagagtactatctatccgatgtgggactaaatcc 22196428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 163
Target Start/End: Original strand, 30588224 - 30588258
Alignment:
Q  129 aggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||||||||||||||||||||||||||||||||||    
T  30588224 aggggcggaccgcaattaaggcggaatttccaaca 30588258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 15844310 - 15844374
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| | | |  ||||||||||||||||||| ||| ||||| |||||    
T  15844310 aatgtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaacgaagg 15844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19439913 - 19439862
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||| ||||||||||| | |||||| ||| ||||||||||||||||    
T  19439913 tctttataaattcttctcaagaatcctatctatctgatgtgggactaaatcc 19439862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22196604 - 22196655
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||||||||||||||  ||||| ||  ||||||||||||||||    
T  22196604 tctttataaactcttctcaagagtcatatctatccgatgtgggactaaatcc 22196655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29396394 - 29396445
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||| ||||||||| | |||||| ||| ||||||||||||||||    
T  29396394 tctttataaacttttctcaagattcctatctatctgatgtgggactaaatcc 29396445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30329889 - 30329838
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  30329889 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 30329838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 30587872 - 30587931
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaat 95  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||| ||| ||||||    
T  30587872 aatgtgggactaaatccacccttttaagcccaacacattgaaggtgttgaaggttgcaat 30587931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32395365 - 32395416
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  32395365 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 32395416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 33040518 - 33040472
Alignment:
Q  6 ataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||||||| | |||||| ||| ||||||||||||||||    
T  33040518 ataaactcttctcaagaatcctatctatctgatgtgggactaaatcc 33040472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14769883 - 14769936
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccac 54  Q
    |||||||||||||||||||||| | |||||| ||  ||||| ||||||||||||    
T  14769883 tctttataaactcttctcaagaatcctatctatccgatgtgagactaaatccac 14769936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21214252 - 21214414
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||    
T  21214252 tctttataaactcttctcaagagtgctatctatctaatgtgggactaaatccaccccctcaaagccaacacaatgaaggttttggaggcggcaattaagg 21214351  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21214352 ctaaccaaaggtcacaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 21214414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43195837 - 43195674
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  43195837 tctttataaactcttctcaagagtactatctatctgatgtgggactaaatctaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 43195738  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43195737 ctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaacac 43195674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43169295 - 43169133
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  43169295 tctttataaactcttctcaagagtactatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 43169196  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43169195 ctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 43169133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21213936 - 21214099
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  21213936 tctttataaactcttctcaagagtactatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggcggcaattaagg 21214035  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  21214036 ctaaccaaagatcgcaatttaggcgactaggggcggaccacaattaaggcggaatttccaacac 21214099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17509162 - 17509000
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17509162 tctttataaactcttctcaagggtgctatctatctgatgtggggctaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 17509063  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||    
T  17509062 ctaaccaaaggtcgcaattaaggcgacgaggggcggactgcaattaaggcggaatttccaaca 17509000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25441749 - 25441587
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||    
T  25441749 tctttataaactcttctcaagagtactatctatctgatgtgggactaaatccaaccccttgaagccaacacaatcaaggtattggaggctgcaatgaagg 25441650  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||    
T  25441649 ctaaccaaaggccgcaatttaggcgactaggggcggaccgcaataaaggtggaatttccaaca 25441587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3977054 - 3977216
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||    
T  3977054 tctttataaactcttctcaagagtactatctatccgatgtgggactaaatccaccccctcagagccaacacaatgaaggtgttagaggctgcaattaagg 3977153  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| | ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3977154 ctaaccgaaggatgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 3977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7877897 - 7877735
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||| |||||||||||| ||  |||| |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  7877897 tctttataaactcttctcgagagtgctatctatccgatgtaggactaaatccaccccctcaaagccaacacaatgaagatgttggagactgcaatgaagg 7877798  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| | |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||    
T  7877797 ctaaccgaaggtcgcaatttaggcgactagggacggaccgcaattaaagcggaatttccaaca 7877735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 18901915 - 18902069
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||| ||||||||  ||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18901915 tctttataaactcttttcaagagtcttatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 18902014  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaat 155  Q
    |||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||    
T  18902015 ctaaccaaagatcgcaatttaggcgactaggggcggaccacaattaaggcggaat 18902069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 30166130 - 30166292
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||| || |    
T  30166130 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacatagtgaaggtgttggagactgcaattaaag 30166229  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  30166230 ctaaccaaaggtcgcaattaaggcgactaggggcggaccacaattaaggcggaatttccaaca 30166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 3976209 - 3976369
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggcta 103  Q
    ||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  3976209 ttataaactcttctcaagagtactatctatccgatgtgggactaaatccaccccctcaaagccaacataatgaaggtgttggaggctgcaattaaggcta 3976308  T
Q  104 agcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |   |||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||||    
T  3976309 actgaaggtcgcaatttaggcgactaggggcggaccacaattaaggtgaaatttccaacac 3976369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 42768385 - 42768545
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||  ||||| ||  |||||||||||||| |||| ||| |||||||||||||||||||| |||  ||||||||||||||    
T  42768385 tctttataaactcttctcaagagt--tatctatccgatgtgggactaaattcacctcctcaaagccaacacaatgaaggtattgttggctgcaatgaagg 42768482  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  42768483 ctaaccaaaggtcgcaatttaggcgactaggggcgaaccgcaattaaggcggaatttccaaca 42768545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23054379 - 23054217
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |    
T  23054379 tctttataaactcttctcaagagttatatctatctgatgtgggactaaatccaccccctcaaagccaacacattgaaggtgttggaggctgcaattaaag 23054280  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| ||||||||||||||||  |||||  |||| |||||||||||||| |||||||||||||    
T  23054279 ctaaccaaaggtcgcaatttagacgactccgggcagaccgcaattaaggtggaatttccaaca 23054217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11969105 - 11968947
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  | ||||||||||||||||||||| |  |||||||||||||||||| |||||||||||| |||||    
T  11969105 tctttataaactcttctcaagagtactatctatccgacgtgggactaaatccaccccctca--gccaacacaatgaaggtgctggaggctgcaacgaagg 11969008  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    |||| | |||||| ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  11969007 ctaacccaaggtcacaatttaggcgactaggggcggactgcaattaaggcggaatttccaa 11968947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3976522 - 3976684
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| |  ||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  3976522 tctttataaactcttctcaagaatattatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 3976621  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    ||||   |||||||||||||| |||| |||||| ||||||| ||||||| ||||||||||||||    
T  3976622 ctaa-tgaaggtcgcaatttaggcgattaggggtggaccgcgattaaggtggaatttccaacac 3976684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6183417 - 6183586
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttg-------gaggctgca 93  Q
    |||||||||||||||||||||||| |||||| ||  |||||||| |||||||||||||| ||||||||||||||||||||||||       |||||||||    
T  6183417 tctttataaactcttctcaagagtactatctatccgatgtgggattaaatccaccccctcaaagccaacacaatgaaggtgttggagcctagaggctgca 6183516  T
Q  94 atgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    || |||||||| | |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  6183517 attaaggctaaccgaaggtcgcaatttaggcgactagggacggaccacaattaaggcggaatttccaaca 6183586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 15820161 - 15820298
Alignment:
Q  10 actcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaa 109  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||    
T  15820161 actcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaataaaggcaaaccaaa 15820260  T
Q  110 ggtcgcaatttatgcgactaggggcggaccgcaattaa 147  Q
    || ||||||| | || ||  ||||||||||||||||||    
T  15820261 ggccgcaattaaggcaaccgggggcggaccgcaattaa 15820298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10849542 - 10849704
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||| |||||||  |||||| ||| | |||| ||||||||||| |||  ||||||||||||||||||||||||| |||||||||||| |    
T  10849542 tctttataaactcttatcaagagccctatctatctgaagtggaactaaatccacgcccacaaagccaacacaatgaaggtgttggcggctgcaatgaaag 10849641  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||| | ||||||| | || ||||||||||||||||||| ||||||||||||||||||    
T  10849642 caaatcaaaagccgcaattaaggcaactaggggcggaccgcaataaaggcggaatttccaaca 10849704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43688472 - 43688635
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcca-cccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    |||||||||||||||||||||||| |||||| ||  ||||| || |||||||| |||||| |||||||||| ||||||||||||||||||||||||||||    
T  43688472 tctttataaactcttctcaagagtcctatctatccgatgtgagattaaatccatccccctcaaagccaacataatgaaggtgttggaggctgcaatgaag 43688571  T
Q  100 gctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
     | || |||||| ||||||||| ||||| || || |||||||||| ||| || |||||||||||    
T  43688572 acaaaccaaaggccgcaatttaagcgaccagaggtggaccgcaataaagtcgaaatttccaaca 43688635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 5424843 - 5424969
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcgg 136  Q
    ||||||||||||| |||||| || |||| |||||||||||||||||||||||||||||||||||  || |||||| ||||||||| ||||||||||  ||    
T  5424843 atgtgggactaaacccaccctctcaaaggcaacacaatgaaggtgttggaggctgcaatgaaggaaaaccaaaggccgcaatttaggcgactagggaagg 5424942  T
Q  137 accgcaattaaggcggaatttccaaca 163  Q
    || |||||||||| |||||||||||||    
T  5424943 acagcaattaaggtggaatttccaaca 5424969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 3976827 - 3976901
Alignment:
Q  90 tgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||||| |||||||| | ||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||    
T  3976827 tgcaattaaggctaaccgaaggtcgcaatgtaggcgactaggggcggatcgcaattaaagcggaatttccaacac 3976901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 18183478 - 18183358
Alignment:
Q  42 ggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgc 141  Q
    |||||||||||| ||| | | | ||||||||||||||||||||||||||||||||||||| |  |||| | ||| | ||| ||| ||| ||| ||| |||    
T  18183478 ggactaaatccatcccatcacacccaacacaatgaaggtgttggaggctgcaatgaaggcaactcaaatgccgc-acttaggcggctaagggtggatcgc 18183380  T
Q  142 aattaaggcggaatttccaaca 163  Q
    ||| ||||||||||||||||||    
T  18183379 aatgaaggcggaatttccaaca 18183358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 3003995 - 3004057
Alignment:
Q  38 tgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||| ||| ||||| | | |||||||||||||||||||||||||||| |||||||    
T  3003995 tgtgggactaaacccatcccctcacacccaacacaatgaaggtgttggaggctgcgatgaagg 3004057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 14522518 - 14522456
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaa 98  Q
    ||||||||| |||||||| ||| ||| | ||| |||||||||||| |||||||||||||||||    
T  14522518 aatgtgggattaaatccagccctttacacccatcacaatgaaggtattggaggctgcaatgaa 14522456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 100
Target Start/End: Complemental strand, 887769 - 887738
Alignment:
Q  69 cacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||||    
T  887769 cacaatgaaggtgttggaggctgcaatgaagg 887738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4506091 - 4506142
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  4506091 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 4506142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10862109 - 10862160
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  10862109 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 10862160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14280333 - 14280282
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    ||||||||||||||||||| || | |||||| || |||||||||||||||||    
T  14280333 tctttataaactcttctcatgaatcctatctatccaatgtgggactaaatcc 14280282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28193626 - 28193677
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||| ||||||||||| | |||||| ||| ||||||||||||||||    
T  28193626 tctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatcc 28193677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33532787 - 33532838
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  33532787 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 33532838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 11339784 - 11339846
Alignment:
Q  38 tgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||  |   | | ||||||||||||||||||||||||||||| ||||    
T  11339784 tgtgggactaaatccaccctttcgcacctaacacaatgaaggtgttggaggctgcaataaagg 11339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10542114 - 10542159
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggact 46  Q
    ||||||||||||||| |||||||| | |||| ||||||||||||||    
T  10542114 tctttataaactcttatcaagagttcaatctatctaatgtgggact 10542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26847293 - 26847338
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggact 46  Q
    ||||||||||||||| |||||||| |||||| || |||||||||||    
T  26847293 tctttataaactcttatcaagagtcctatctatccaatgtgggact 26847338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 21373972 - 21373936
Alignment:
Q  65 ccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||| | ||||||||||||||||||||||||    
T  21373972 ccaacacaataatggtgttggaggctgcaatgaaggc 21373936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 50858381 - 50858218
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  50858381 tctttataaactcttctcaagagtactatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 50858282  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  50858281 ctaaccgaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcggaatttccaacac 50858218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 53740235 - 53740070
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  53740235 tctttataaactcttctcaagagtactatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 53740136  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacacct 166  Q
    |||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53740135 ctaaccgaaggtcacaatttaggcgactaggggcggaccgcaattaaggcggaatttccaacacct 53740070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29669729 - 29669891
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  29669729 tctttataaactcttctcaagagtgctatctatctgatgtgggactaaatccacccc-tcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 29669827  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||| ||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  29669828 ctaaccaaaggccgcaattaaggcgactaggggtggaccgcaattaaggcggaatttccaacac 29669891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 15665202 - 15665042
Alignment:
Q  5 tataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaa 104  Q
    |||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15665202 tataaactcttctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaa 15665103  T
Q  105 -gcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
      |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  15665102 cccaaaggtcgcaatttaggcgactgggggcggaccgcaattaaggcggaatttccaacac 15665042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29669414 - 29669576
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  29669414 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccacccc-tcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 29669512  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| ||||||  |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  29669513 ctaaccaaaggcagcaattaaggcgactaggggcggaccgcaattaaggcggaatttccaacac 29669576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45426987 - 45427150
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  45426987 tctttataaactcttctcaagagtactatctatccgatgtggggctaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaag 45427086  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| | |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  45427087 ctaacccaaggtcgcaatttaggcgactaggggcggacagcaattaaggcggaatttccaacac 45427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 45427303 - 45427465
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||   || | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45427303 tctttataaactcttctcaagagtaaaatatatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 45427402  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  45427403 ctaacccaaggtcgcaatttaggcgactaggggcggaccgcagttaaggcggaatttccaaca 45427465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 50858065 - 50857903
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||| ||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  50858065 tctttataaaatcttctcaagagtactatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 50857966  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  50857965 ctaaccgaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcggaatttccaaca 50857903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 991090 - 990929
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  991090 tctttataaactcttctcaagagtgctatctatccgacgtgg-actaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 990992  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  990991 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggc-gaatttccaacac 990929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 52214668 - 52214506
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||| ||||||||  |||||  | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  52214668 tctttataaactcttatcaagagtattatctacccaatgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 52214569  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52214568 ctaaccaaaggtctcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 52214506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 29734606 - 29734452
Alignment:
Q  9 aactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaa 108  Q
    |||||||||||| ||| |||||| ||  |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||    
T  29734606 aactcttctcaaaagtcctatctatccgatgtgggactaaattcaccccctcaaagtcaacacaatgaaggtgttggaggctgcaatgaaggctaaccaa 29734507  T
Q  109 aggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  29734506 aggtcgcaatttaggcgactaggggcggaccacaattaaggcggaatttccaaca 29734452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 53738259 - 53738422
Alignment:
Q  1 tctttataaactcttctcaagagtgctatct-ttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    ||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53738259 tctttataaactcttctcaagagtcttatctattcta-tgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaag 53738357  T
Q  100 gctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    || || |||||| ||||||||| ||||||||||| |||||||||| ||||||||||| |||||||    
T  53738358 gcaaaccaaaggccgcaatttaggcgactaggggtggaccgcaataaaggcggaattaccaacac 53738422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 23018523 - 23018360
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||  ||||| ||  ||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23018523 tctttataaactcttctcaagagtcatatctatccgatgtgagattaaattcacccccttaaagccaacacaatgaaggtgttggaggttgcaatgaagg 23018424  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||    
T  23018423 ctaaccaaaggtcgcaatttaggcgactagggacggaccgcaatgaaggcggaattaccaacac 23018360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43972092 - 43971933
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||| |||||||||||||||| |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43972092 tctttatcaactcttctcaagagtcctatctatccaacgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 43971993  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttcca 160  Q
      || ||||||||| |||||| ||  |||||||| ||||||||| |||| ||||||||||    
T  43971992 taaaccaaaggtcgtaatttaggcagctaggggcagaccgcaatgaaggtggaatttcca 43971933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 48843068 - 48843239
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||| |||||||| |||||| ||| ||| ||||||||||||||||||| | |||||||| ||||||||||||| |||||||||||||||    
T  48843068 tctttataaactcttttcaagagtcctatctatctgatgcgggactaaatccaccccctcagagccaacaaaatgaaggtgttgaaggctgcaatgaagg 48843167  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacacctttcaat 172  Q
      || |||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||  |||||||    
T  48843168 aaaatcaaaggccgcaatttaggcgactaggggtggaccgcaataaaggcggaatttccaacatgtttcaat 48843239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 37 - 164
Target Start/End: Original strand, 32988357 - 32988484
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcgg 136  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| | |||||| |||||    
T  32988357 atgtgggactaaatccaccacctcaaagccaacacaatgaaggtgttgggggctgcaatgaaggctaaccaaaagtcgcaatttaggtgactagcggcgg 32988456  T
Q  137 accgcaattaaggcggaatttccaacac 164  Q
    ||||||||||||||||||||||||||||    
T  32988457 accgcaattaaggcggaatttccaacac 32988484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43972408 - 43972245
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||| |||| ||||||||||| |||||| ||  |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  43972408 tctttatcaacttttctcaagagtcctatctatccgatgtgggactaaattcaccccctcaaaaccaacacaatgaaggtgttggaggctgcaatgaagg 43972309  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    | || |||||| ||||||||| |||||| ||||| ||||||||| |||| ||||||||||||||    
T  43972308 caaatcaaaggccgcaatttaggcgactgggggcagaccgcaatgaaggtggaatttccaacac 43972245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 53739919 - 53739748
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa---------tgaaggtgttggaggctg 91  Q
    |||||||||||||||||||||||| |||||| ||  || |||||||||||||||||||| |||||||||||||         ||||||||||||||||||    
T  53739919 tctttataaactcttctcaagagtactatctatccgatatgggactaaatccaccccctcaaagccaacacaaattacacaatgaaggtgttggaggctg 53739820  T
Q  92 caatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  53739819 caattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcagaatttccaaca 53739748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 36558517 - 36558679
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||| |||  ||||| ||  ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||    
T  36558517 tctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggttgctatgaagg 36558616  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||| ||||||| | | |||||||||||||| ||||||||||| ||||||||||||    
T  36558617 caaaccaaaggccgcaattaaggtgactaggggcggactgcaattaaggcagaatttccaaca 36558679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 51469534 - 51469377
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||||      |||||||||||||||||||||||||||    
T  51469534 tctttataaactcttctcaagagtcctatctatccgatgtgggactaaatccaccccctcaaagccag-----tgaaggtgttggaggctgcaatgaagg 51469440  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || | || | ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  51469439 caaacccaaaggcgcaatttaggcgactaggggcggaccgcaataaaggcggaatttccaaca 51469377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 56509662 - 56509504
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||| || |||||| ||  |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  56509662 tctttataaactcttctcaagggtcctatctatccgatgtaggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaagg 56509563  T
Q  101 ctaagcaaaggtcgcaatttatgc-gactaggggcggaccgcaattaaggcggaatttc 158  Q
    | || |||||| ||| ||||| || |||||||||||||||||||| |||| ||||||||    
T  56509562 caaaccaaaggccgcgatttaggcggactaggggcggaccgcaataaaggtggaatttc 56509504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 991254 - 991139
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggcta 103  Q
    |||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  991254 ttataaactcttctcaagagtgttatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggcta 991155  T
Q  104 agcaaaggtcgcaatt 119  Q
    | ||||||||||||||    
T  991154 accaaaggtcgcaatt 991139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22867137 - 22866975
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  | ||||||||||||||||||||| ||||||| ||||| |||||||||||| |||||||||||||    
T  22867137 tctttataaactcttctcaagagtcctatctatccgacgtgggactaaatccaccccctcaaagccagcacaacgaaggtgttggaagctgcaatgaagg 22867038  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | ||  ||||| ||||||| | |||||||||||| |||| |||| ||||||||||||| ||||    
T  22867037 caaactaaaggccgcaattaaggcgactaggggcagaccacaataaaggcggaatttctaaca 22866975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 990600 - 990482
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  990600 tctttataaactcttctcaagagtgttatctatccgatgtgggactaaattcaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 990501  T
Q  101 ctaagcaaaggtcgcaatt 119  Q
    |||| ||||||| ||||||    
T  990500 ctaaccaaaggtggcaatt 990482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 990821 - 990731
Alignment:
Q  74 tgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  990821 tgaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaacac 990731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 49544385 - 49544225
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| |  ||||| ||  |||||| || ||||||| ||| | |||||||||||||| |||||||||||||||||||||||||    
T  49544385 tctttataaactcttctcaagaatcttatctatccgatgtggaacaaaatccatccc-tcaaagccaacacaatcaaggtgttggaggctgcaatgaagg 49544287  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| |||||| ||||||| | ||||||||||  ||||| |||| ||| |||||||||||||||    
T  49544286 ctaaccaaaggccgcaattaaggcgactaggg--ggaccacaataaagacggaatttccaacac 49544225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 51470533 - 51470435
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaa-gccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||||||||||||||||| |||||| ||  |||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  51470533 ttataaactcttctcaagagtcctatctatccgatgtgggactaaatcctccccctcaaaagccaacacagtgaaggtgttggaggctgcaatgaaggc 51470435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13254436 - 13254358
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaagg 79  Q
    |||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||| |||||||||||||||||||    
T  13254436 tctttataaactcttctcaatagtcctatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaagg 13254358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 18862642 - 18862547
Alignment:
Q  72 aatgaaggtgttggaggctgc---aatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||||||||||||||||||||   |||||| |||||  |||||| |||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  18862642 aatgaaggtgttggaggctgctacaatgaaagctaacaaaaggttgcaatttaggcgactagaggcggaccgcgattaaggcggaatttccaacac 18862547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 17222783 - 17222849
Alignment:
Q  97 aaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  17222783 aaggctaaccaaaggtcgcaatttaggcgactagaggcggaccgcaattaaggtggaatttccaaca 17222849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 17222720 - 17222784
Alignment:
Q  4 ttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaa 68  Q
    |||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  17222720 ttataaactcttcttaagagtgctatctatcctatgtgggactaaatccaccccctcaaagccaa 17222784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 46332622 - 46332744
Alignment:
Q  39 gtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgac-taggggcgga 137  Q
    ||||||||||||||||||| | ||| ||||  ||||||| |||||| |||||||||||||||| |  |||| | ||||| ||| ||| | ||||||||||    
T  46332622 gtgggactaaatccaccccttaaaacccaatccaatgaacgtgttgaaggctgcaatgaaggcaacccaaatgccgcaa-ttaggcggcttaggggcgga 46332720  T
Q  138 ccgcaattaaggcggaatttccaa 161  Q
    ||||||| |||||| |||||||||    
T  46332721 ccgcaatgaaggcgaaatttccaa 46332744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 54595147 - 54595275
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||||||||||| ||||||||| | | | ||  |||||||||||||||||||| |||||||||||| |   ||| | ||||| ||| ||  |||||| ||    
T  54595147 aatgtgggactatatccaccccttcacaccccgcacaatgaaggtgttggaggttgcaatgaaggcaacttaaatgccgcaa-ttaggcagctagggacg 54595245  T
Q  136 gaccgcaattaaggcggaatttccaacacc 165  Q
    | ||||||| ||||||||||||||||||||    
T  54595246 gtccgcaatgaaggcggaatttccaacacc 54595275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 30491043 - 30491102
Alignment:
Q  42 ggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||| | | | |||||||| ||||||||||||||||||||||||||||    
T  30491043 ggactaaatccaccccttcacacccaacacattgaaggtgttggaggctgcaatgaaggc 30491102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 44898837 - 44898873
Alignment:
Q  65 ccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||||||||||||||||||||    
T  44898837 ccaacacaatgaaggtgttggaggctgcaatgaaggc 44898873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 52043164 - 52043227
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    |||||| ||||||||||||||| | | | || | ||||||||||||||||||||||||||||||    
T  52043164 aatgtgagactaaatccaccccttcacacccgatacaatgaaggtgttggaggctgcaatgaag 52043227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 33385312 - 33385242
Alignment:
Q  3 tttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    |||||||| |||| |||||||| |||||| ||  |||||||||||||| ||| |||| |||||||||||||    
T  33385312 tttataaagtcttatcaagagttctatctctccgatgtgggactaaattcactccctgaaagccaacacaa 33385242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 48046375 - 48046309
Alignment:
Q  36 aatgtgggactaaatccacccccttaa-agccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||||| || | | |||||| | ||||||||||||||| ||||||||||||    
T  48046375 aatgtgggactaaatccacccctttcacacccaacatagtgaaggtgttggaggttgcaatgaaggc 48046309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 13254340 - 13254295
Alignment:
Q  118 tttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||    
T  13254340 tttaggcgactaggggcagaccgcaataaaggcggaatttccaaca 13254295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 26942679 - 26942736
Alignment:
Q  42 ggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    |||||||||||||||| | | | ||||||||||||| |||||||||| ||||||||||    
T  26942679 ggactaaatccaccccttcacacccaacacaatgaatgtgttggaggttgcaatgaag 26942736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34206044 - 34206117
Alignment:
Q  1 tctttataa-actcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||| |||||| ||||||||  |||||  |  ||||||||||||||||||||||| |||||||||||||    
T  34206044 tctttataagactcttatcaagagtcttatctaaccgatgtgggactaaatccaccccctcaaagccaacacaa 34206117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 3137748 - 3137784
Alignment:
Q  65 ccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||| ||||||||||||||||    
T  3137748 ccaacacaatgaaggtgttgcaggctgcaatgaaggc 3137784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2016585 - 2016534
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||| ||||| ||||||||||    
T  2016585 tctttataaactcttctcaagaatcctatctatctgatgtgagactaaatcc 2016534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11290222 - 11290171
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  11290222 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 11290171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37097782 - 37097833
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||| ||||||||||| | |||||| ||| ||||||||||||||||    
T  37097782 tctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatcc 37097833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50868064 - 50868115
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  50868064 tctttataaactcttctcaagattcctatctatccgatgtgggactaaatcc 50868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 42788140 - 42788090
Alignment:
Q  44 actaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaa 94  Q
    |||||||| ||||| | ||| ||||| ||||||||||||||||||||||||    
T  42788140 actaaatctaccccttcaaatccaacccaatgaaggtgttggaggctgcaa 42788090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 3137030 - 3137095
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||||  |  || ||| |||||||| | ||||||||||| ||||||||||    
T  3137030 aatgtgggactaaatccacccattcgaacccagcacaatgaggatgttggaggctacaatgaaggc 3137095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 101
Target Start/End: Original strand, 3137285 - 3137314
Alignment:
Q  72 aatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||||||||||||||||||||||||||    
T  3137285 aatgaaggtgttggaggctgcaatgaaggc 3137314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 4026124 - 4026075
Alignment:
Q  3 tttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  4026124 tttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 4026075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 23311556 - 23311620
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||| |||||||||||||||| | ||| ||||||||   ||||||||||||||||||| ||||||    
T  23311556 aatgtaggactaaatccaccccttcaaacccaacacaca-aaggtgttggaggctgcaaagaaggc 23311620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 26942464 - 26942521
Alignment:
Q  42 ggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaag 99  Q
    |||| ||||||||||| | | | ||||||||||||| |||||||||| ||||||||||    
T  26942464 ggacaaaatccaccccttcatacccaacacaatgaatgtgttggaggttgcaatgaag 26942521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34206306 - 34206379
Alignment:
Q  1 tctttataa-actcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||| |||||| ||||||||  |||||  |  ||||| ||||||||||||||||| |||||||||||||    
T  34206306 tctttataagactcttatcaagagtcttatctaaccgatgtgagactaaatccaccccctcaaagccaacacaa 34206379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1923042 - 1923086
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggac 45  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||    
T  1923042 tctttataaactcttctcaagagtcttatctatctgatgtgggac 1923086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29113502 - 29113458
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggac 45  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||    
T  29113502 tctttataaactcttctcaagagtcttatctatctgatgtgggac 29113458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 32784342 - 32784306
Alignment:
Q  128 taggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||||| |||||||| |||||||||||||||||||||    
T  32784342 taggggtggaccgcagttaaggcggaatttccaacac 32784306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18905909 - 18905747
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  18905909 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaattaagg 18905810  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  18905809 ctaaccaaaggtcgcaaattaggcgactaggggcggaccgcaattaaggcggaatttccaaca 18905747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21085199 - 21085361
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21085199 tctttataaactcttctcaagagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 21085298  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| ||||||| |||||| | |||||  ||||||||||||||||||||||||||||||||||    
T  21085299 ctaaccaaaggttgcaattgacgcgacagggggcggaccgcaattaaggcggaatttccaaca 21085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20298567 - 20298729
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| |  ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20298567 tctttataaactcttctcaagaataatatctatcaaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 20298666  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| ||||||| |||||| | |||||  ||||||||||||||||||||||||||||||||||    
T  20298667 ctaaccaaaggttgcaattgacgcgacagggggcggaccgcaattaaggcggaatttccaaca 20298729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36997219 - 36997057
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||||||||| ||||||||  |||||  | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  36997219 tctttataaactcttatcaagagtagtatctacccaatgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 36997120  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36997119 ctaaccaaaggtcacaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 36997057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32931454 - 32931297
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||| || ||||| ||  ||||||||||||||||||||||| ||||||||     |||||||||||||||||||||||||||    
T  32931454 tctttataaactcttctcaagaatgatatctatccgatgtgggactaaatccaccccctcaaagccaa-----tgaaggtgttggaggctgcaatgaagg 32931360  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32931359 ctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 32931297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23027556 - 23027720
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  23027556 tctttataaactcttctcaagagttctatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgtttgaggctgcaatgaagg 23027655  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacacc 165  Q
    | |  |||| |  |||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  23027656 caagccaaatgctgcaatttaggcgactaggggcggactgcaatgaaggcggaatttccaacacc 23027720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 21653376 - 21653217
Alignment:
Q  5 tataaactcttctcaagagtgctatctttctaatgtgggactaaatccaccccctt-aaagccaacacaatgaaggtgttggaggctgcaatgaaggcta 103  Q
    |||||||||||||||||||  |||||| ||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||    
T  21653376 tataaactcttctcaagagcactatctatccgatgtgggactaaatccacccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggcta 21653277  T
Q  104 agcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | | ||  |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21653276 accgaaaatcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 21653217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 23027879 - 23028041
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||||| |||||||||||||| |||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  23027879 tctttataagctcttctcaagagttctatctatcctatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaagg 23027978  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | |  |||||| ||||||||| | |||||||||| ||||||||| ||||||||||||||||||    
T  23027979 caagccaaaggccgcaatttaggtgactaggggcagaccgcaataaaggcggaatttccaaca 23028041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 37 - 163
Target Start/End: Complemental strand, 31767018 - 31766892
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcgg 136  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||| ||||||||| | ||||||||||||    
T  31767018 atgtgggactaaatccaccccctcaaagccaacacaatgaaggggttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggtgactaggggcgg 31766919  T
Q  137 accgcaattaaggcggaatttccaaca 163  Q
    |||||||| ||||||||||||||||||    
T  31766918 accgcaatgaaggcggaatttccaaca 31766892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3183962 - 3184116
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||        ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3183962 tctttataaactcttctcaagagtcctatctatccgatgt--------atccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaagg 3184053  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | || |||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  3184054 caaaccaaaggccgcaatttaggcgactaggggcggaccgcaataaaggcggaatttacaaca 3184116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 40754490 - 40754338
Alignment:
Q  9 aactcttctcaagagtgctatctttctaatgtgggactaaatccaccccctt-aaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagca 107  Q
    |||||||||||||||| | |||| ||| |||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |     
T  40754490 aactcttctcaagagtcccatctatctgatgtgggactaagtccacccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaacct 40754391  T
Q  108 aaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttcca 160  Q
    |||| | ||||||| |||||||||||||||||||||| |||||||| ||||||    
T  40754390 aaggccccaatttaggcgactaggggcggaccgcaataaaggcggattttcca 40754338  T

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Target: chr8; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 21653853 - 21653700
Alignment:
Q  5 tataaactcttctcaagagtgctatctttctaatgtgggactaaatccaccccctt-aaagccaacacaatgaaggtgttggaggctgcaatgaaggcta 103  Q
    |||||||| ||||||||||  |||||| ||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||    
T  21653853 tataaacttttctcaagagcactatctatccgatgtgggactaaatccacccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggcta 21653754  T
Q  104 agcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttc 158  Q
    | | ||| |||||||||| ||||||||||| |||| |||||||||||||||||||    
T  21653753 accgaagatcgcaatttaggcgactagggg-ggactgcaattaaggcggaatttc 21653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22277577 - 22277415
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||| | | || ||| | ||  |||||||||||||| |||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  22277577 tctttataaactcttctcgataatgttatatatccgatgtgggactaaattcaccccctcaaagccaacaaaatgaaagtgttggaggctgcaatgaagg 22277478  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaaca 163  Q
    | ||  |||||  |||||||| |||||||||||||||||||||| ||| |||||||| |||||    
T  22277477 caaactaaaggctgcaatttaggcgactaggggcggaccgcaataaagacggaattttcaaca 22277415  T

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Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34248412 - 34248340
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||||||||| |||||||| ||||||  | |||||||||||||||||||||||| |||||||||||||    
T  34248412 tctttataaactcttatcaagagtcctatctaaccaatgtgggactaaatccaccccctcaaagccaacacaa 34248340  T

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Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 164
Target Start/End: Complemental strand, 38887119 - 38886992
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    ||||||||| |||||| ||||| | | | |||||||||||||||||||||||||||||| |||||| |  |||| | ||||| ||| ||| ||||||| |    
T  38887119 aatgtgggattaaatcaaccccttcacacccaacacaatgaaggtgttggaggctgcaacgaaggcaacccaaatgccgcaa-ttaggcggctaggggtg 38887021  T
Q  136 gaccgcaattaaggcggaatttccaacac 164  Q
    ||| ||||| |||| ||||||||||||||    
T  38887020 gacagcaatgaaggaggaatttccaacac 38886992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 44933168 - 44933291
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcgg 136  Q
    ||||| ||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| |  ||||||  |||||   ||| ||||| |||||    
T  44933168 atgtgagactaaatccaccccttcaaacccaacacaatgaaggtgttggagggtgcaatgaaggcaacccaaaggctgcaat---tgccactagaggcgg 44933264  T
Q  137 accgcaattaaggcggaatttccaaca 163  Q
    |||||||| |||||  || ||||||||    
T  44933265 accgcaatgaaggcaaaacttccaaca 44933291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 30590466 - 30590401
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    |||||||||||||||||||||| | | | | |||||||||||||||||||||||||||||||||||    
T  30590466 aatgtgggactaaatccaccccttcacaccaaacacaatgaaggtgttggaggctgcaatgaaggc 30590401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 28488422 - 28488544
Alignment:
Q  40 tgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggacc 139  Q
    |||||||||||||||||| | ||| |||||||||||||||||||  |||||||||||||||| |  |||| | | ||| ||| |||  |||||| |||||    
T  28488422 tgggactaaatccaccccttcaaacccaacacaatgaaggtgtttaaggctgcaatgaaggcaactcaaatgccacaa-ttaggcggttaggggtggacc 28488520  T
Q  140 gcaattaaggcggaatttccaaca 163  Q
     |||| ||||| ||||||||||||    
T  28488521 acaataaaggcagaatttccaaca 28488544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 164
Target Start/End: Complemental strand, 25971444 - 25971316
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    |||||| |||| |||||||||| | | | ||| |||||||||||||||||| ||||||||||||||||   ||| ||| ||| ||| ||| ||||||| |    
T  25971444 aatgtgtgactgaatccaccccttcacacccagcacaatgaaggtgttggatgctgcaatgaaggctaccaaaatgtcacaa-ttaggcggctaggggtg 25971346  T
Q  136 gaccgcaa-ttaaggcggaatttccaacac 164  Q
    |||||||| | |||||||||||| ||||||    
T  25971345 gaccgcaactgaaggcggaattttcaacac 25971316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 26639129 - 26639065
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||||||||||||||||||||||| | |  |||||||||||||||||||| | ||||||||||||    
T  26639129 aatgtgggactaaatccaccccctcacactcaacacaatgaaggtgttggggactgcaatgaagg 26639065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 39590687 - 39590593
Alignment:
Q  65 ccaacacaatgaaggtgttggaggctgcaatgaaggctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    ||||||||||||||||||||||| ||||||||||||| |  |||| | ||||| ||| ||| ||||||||||||||||||  |||| ||||||||||    
T  39590687 ccaacacaatgaaggtgttggagactgcaatgaaggc-acccaaatgccgcaa-ttaggcggctaggggcggaccgcaatagaggcagaatttccaa 39590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34248130 - 34248057
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccac-ccccttaaagccaacacaa 73  Q
    ||||||||||||||| |||||||| ||||||  |  |||||||||||||||||| ||||| |||||||||||||    
T  34248130 tctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatccacccccctcaaagccaacacaa 34248057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8276602 - 8276551
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| || |||||||||||||||||    
T  8276602 tctttataaactcttctcaagaatcctatctatccaatgtgggactaaatcc 8276551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18464123 - 18464072
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||||||||||    
T  18464123 tctttataaactcttctcaagaatcctatctatctgatgtgggactaaatcc 18464072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 34530005 - 34529940
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||||||||||||| |||| ||| | |||||||||||||||| | |||||||  |||||||||    
T  34530005 aatgtgggactaaatccgcccctttacacccaacacaatgaaggtataggaggcttaaatgaaggc 34529940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 42369591 - 42369530
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaa 98  Q
    ||||||||||| | ||||||||||| | ||||||||||||||||| | |||||||| |||||    
T  42369591 atgtgggactagaaccacccccttacacccaacacaatgaaggtgctagaggctgctatgaa 42369530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 36994019 - 36994055
Alignment:
Q  37 atgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||||||||||||||||| |||||||||||||    
T  36994019 atgtgggactaaatccaccccctcaaagccaacacaa 36994055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15711549 - 15711498
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatcc 52  Q
    |||||||||||||||||||||| | |||||| ||  ||||||||||||||||    
T  15711549 tctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 15711498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 34248332 - 34248275
Alignment:
Q  106 caaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaacac 164  Q
    |||| ||||||||| | |||||||||||||||  ||||| |||||||||||||||||||    
T  34248332 caaatgtcgcaatt-aggcgactaggggcggattgcaataaaggcggaatttccaacac 34248275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39587909 - 39587962
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccac 54  Q
    |||||||||||||||||| ||| | |||||  ||| ||||||||||||||||||    
T  39587909 tctttataaactcttctctagaatcctatccatctgatgtgggactaaatccac 39587962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 26642605 - 26642541
Alignment:
Q  36 aatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    ||||||| |||||||||||||  | | |  |||||||||||||||||| ||| ||||||||||||    
T  26642605 aatgtggaactaaatccacccaatcacactcaacacaatgaaggtgtttgagactgcaatgaagg 26642541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27402164 - 27402236
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaa 73  Q
    ||||||||||||| | ||||||||  |||||  |   ||||||| |||||||||||||| |||||||||||||    
T  27402164 tctttataaactcctatcaagagtcatatctaaccggtgtgggattaaatccaccccctcaaagccaacacaa 27402236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 30005578 - 30005614
Alignment:
Q  65 ccaacacaatgaaggtgttggaggctgcaatgaaggc 101  Q
    ||||||||||| | |||||||||||||||||||||||    
T  30005578 ccaacacaatggaagtgttggaggctgcaatgaaggc 30005614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 11078 - 11238
Alignment:
Q  1 tctttataaactcttctcaagagtgctatctttctaatgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaagg 100  Q
    |||| |||||| ||||| || ||| |||||| || |||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  11078 tcttaataaacacttcttaacagtcctatctatccaatgtgggacaaaatccagcccctcaaagccaacacaatgaaggtgttagaggctgtaatgaagg 11177  T
Q  101 ctaagcaaaggtcgcaatttatgcgactaggggcggaccgcaattaaggcggaatttccaa 161  Q
    | || |||||||||||||||| ||||||||||||| |||| ||| |||| |||||||||||    
T  11178 caaaccaaaggtcgcaatttaggcgactaggggcgtaccgtaataaaggtggaatttccaa 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 30710 - 30602
Alignment:
Q  39 gtgggactaaatcca--cccccttaaagccaacacaatgaaggtgttggaggctgcaat-gaaggctaagcaaaggtcgcaatttatgcgactaggggcg 135  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||| | |||||| |||||  || |||| ||||||||||| |||| ||||||||    
T  30710 gtgggactaaatcccacccccctcaaagccaacacaatgaaggtgttggaagttgcaatggaaggtaaaccaaatgtcgcaatttaggcgattaggggcg 30611  T
Q  136 gaccgcaat 144  Q
    |||||||||    
T  30610 gaccgcaat 30602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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