View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12929_low_13 (Length: 495)

Name: NF12929_low_13
Description: NF12929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12929_low_13
NF12929_low_13
[»] scaffold0088 (1 HSPs)
scaffold0088 (279-484)||(27213-27418)
[»] scaffold0725 (1 HSPs)
scaffold0725 (279-483)||(1297-1501)
[»] chr7 (5 HSPs)
chr7 (279-471)||(34293276-34293468)
chr7 (279-484)||(32979455-32979656)
chr7 (280-484)||(10365992-10366188)
chr7 (197-229)||(34293515-34293547)
chr7 (197-227)||(10365893-10365923)
[»] chr6 (2 HSPs)
chr6 (279-484)||(9566998-9567204)
chr6 (280-448)||(11366920-11367076)
[»] chr1 (3 HSPs)
chr1 (280-484)||(47896880-47897084)
chr1 (280-483)||(27786426-27786629)
chr1 (280-483)||(8039422-8039622)
[»] chr8 (2 HSPs)
chr8 (280-475)||(38499409-38499604)
chr8 (280-484)||(10182276-10182478)
[»] chr3 (3 HSPs)
chr3 (280-484)||(11387658-11387861)
chr3 (280-484)||(46742611-46742815)
chr3 (197-227)||(11387559-11387589)
[»] chr2 (1 HSPs)
chr2 (280-484)||(1533485-1533689)
[»] scaffold0005 (1 HSPs)
scaffold0005 (280-430)||(270547-270697)


Alignment Details
Target: scaffold0088 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 279 - 484
Target Start/End: Original strand, 27213 - 27418
Alignment:
Q  279 taagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaa 378  Q
    ||||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27213 taagtcagattcttctctccaccgatccaccaaaacagcatcgtcgacaccactgcaaaatcaccacgtcatcaccctcttcaccttctatcaacgccaa 27312  T
Q  379 aatcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaa 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27313 aatcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaa 27412  T
Q  479 ccaaaa 484  Q
    ||||||    
T  27413 ccaaaa 27418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 279 - 483
Target Start/End: Original strand, 1297 - 1501
Alignment:
Q  279 taagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaa 378  Q
    ||||||||| || |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1297 taagtcagattcttctctccaccgatccaccaaaacagcatcatcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaa 1396  T
Q  379 aatcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaa 478  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  1397 aatcgtgccctaatccaccacaacacaccaatagaaaataaaacacgcaacaggtcgaaacgaaaaaagtcgtcgtcgtttcgaagaggaacaaaaacaa 1496  T
Q  479 ccaaa 483  Q
    |||||    
T  1497 ccaaa 1501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 4e-76; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 279 - 471
Target Start/End: Complemental strand, 34293468 - 34293276
Alignment:
Q  279 taagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaa 378  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  34293468 taagtcagtctcttctctccaccgatccaccaaaacagcattgtcgacaccactgcaaaaccaccacgtcatcaccaccttcatcttctatcaacgccaa 34293369  T
Q  379 aatcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaaca 471  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||| ||| ||||||||||||||||||    
T  34293368 aatcgtgccctactccaccacaacacaccaatagaaaatagaacacgcgacaggtcgaaacaaaaaaagttgtcaccgtttcgaagaggaaca 34293276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 279 - 484
Target Start/End: Original strand, 32979455 - 32979656
Alignment:
Q  279 taagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaa 378  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||| |||||||||| |||||||| |||||||||  |||||||| |||||| ||||||    
T  32979455 taagtcagactcttctctccaccgatccaccaaaacagcatcgtcgccaccactgcacaaccaccatgtcatcaccaccttcacctcctatcaccgccaa 32979554  T
Q  379 aatcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaac-caaaaaagtcgtcgccgtttcgaagaggaacaaaaaca 477  Q
    || | || |||||||||||||| ||||||     || | |||||||||||||| || ||||  |||||||||| |||||||| |||||||||||||||||    
T  32979555 aaccatgacctactccaccacaacacacc-----aacaaaaaacacgcaacagttcaaaacgaaaaaaagtcgccgccgttttgaagaggaacaaaaaca 32979649  T
Q  478 accaaaa 484  Q
    || ||||    
T  32979650 acaaaaa 32979656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 280 - 484
Target Start/End: Original strand, 10365992 - 10366188
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||||||||| ||||||||||||||||||||| || |||  ||||||||| ||||||||| || ||||||||||  ||||||||||||||| |  ||||    
T  10365992 aagtcagactcttctctccaccgatccaccaaa-cagcatcatcgacaccattgcaaaacctccgcgtcatcaccaccttcaccttctatcatctgcaaa 10366090  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    | ||||||||||||||||||| ||| |||  ||||||||||||||||       | |||| |||||||||  | || |||||||||||||||||||||||    
T  10366091 accgtgccctactccaccacaacaccccaccagaaaataaaacacgc-------caaaacgaaaaaagtctcctccatttcgaagaggaacaaaaacaac 10366183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 34293547 - 34293515
Alignment:
Q  197 gaaaacagctacgacgttttcgatgctctctct 229  Q
    |||||||||||||||||||||||||||||||||    
T  34293547 gaaaacagctacgacgttttcgatgctctctct 34293515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 10365893 - 10365923
Alignment:
Q  197 gaaaacagctacgacgttttcgatgctctct 227  Q
    |||||||||||||||||||||||||||||||    
T  10365893 gaaaacagctacgacgttttcgatgctctct 10365923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 6e-75; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 279 - 484
Target Start/End: Original strand, 9566998 - 9567204
Alignment:
Q  279 taagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctctt-caccttctatcaacgcca 377  Q
    ||||| |||||| |||||||| |||| |||||||||| ||| |||||||||||||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  9566998 taagttagactcttctctccatcgattcaccaaaacagcatcgtcgacaccactgcaaaaccaccacgtcgtcaccacctttcaccttctatcaacgcca 9567097  T
Q  378 aaatcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaaca 477  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||    
T  9567098 aaatcgtgccctactccaccacaacacaccaatataaaataaaacacgcaacaggtcaaaacgaaaaaagtcgtcgccgtttcgaagaggaacaaaagca 9567197  T
Q  478 accaaaa 484  Q
    |||||||    
T  9567198 accaaaa 9567204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 448
Target Start/End: Original strand, 11366920 - 11367076
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||||||||  ||||||||| |||||||||||||| ||| || ||||||||||||||||||||||           ||||||||||||||| |||||||    
T  11366920 aagtcagacttttctctccactgatccaccaaaacagcatcgttgacaccactgcaaaaccaccac-----------cttcaccttctatcatcgccaaa 11367008  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagt 448  Q
    | |||||||| |||||||||| || ||||| | ||||||||||||||||||  || |||| ||||||||    
T  11367009 accgtgccctcctccaccacaaca-accaacaaaaaataaaacacgcaacaattcaaaacaaaaaaagt 11367076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 280 - 484
Target Start/End: Original strand, 47896880 - 47897084
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||  |||||| |||||||| |||||||    
T  47896880 aagtcagactcttctctccaccgatccaccaaaacagcatcgtcgacaccactacaaaaccaccacgtcatcaccaccttcacgttctatcatcgccaaa 47896979  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    | ||||||||||||||||||| |||||||| ||||||||||||||||||||  || ||||  ||||||||  ||| ||||||||||||||||||||||||    
T  47896980 accgtgccctactccaccacaacacaccaacagaaaataaaacacgcaacaattcaaaacggaaaaagtctccgctgtttcgaagaggaacaaaaacaac 47897079  T
Q  480 caaaa 484  Q
    |||||    
T  47897080 caaaa 47897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 280 - 483
Target Start/End: Complemental strand, 27786629 - 27786426
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||| ||||| |||||| || |||||||||||||| ||| |||| |||||||| |||| |||||||| ||||||  |||||||| |||| | ||| |||    
T  27786629 aagtcggactcttctctcaactgatccaccaaaacatcatcgtcgccaccactgtaaaatcaccacgttatcaccaccttcacctcctataatcgcaaaa 27786530  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    |  ||| |||||||||||||| |||||||| | |||||| ||||||||| || || |||| ||||||||||  ||||||||||||||||||||||||||     
T  27786529 actgtgacctactccaccacaacacaccaacaaaaaatagaacacgcaatagttcaaaacgaaaaaagtcgctgccgtttcgaagaggaacaaaaacaat 27786430  T
Q  480 caaa 483  Q
    ||||    
T  27786429 caaa 27786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 280 - 483
Target Start/End: Original strand, 8039422 - 8039622
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    |||||| |||| |||||||| ||||||||||||||| |||  ||||||||| |||||||||||| ||||||||||  ||||||||||||||| |||||||    
T  8039422 aagtcatactcttctctccatcgatccaccaaaacatcatcttcgacaccattgcaaaaccaccgcgtcatcaccaccttcaccttctatcatcgccaaa 8039521  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    | | ||||| |||   ||||| |||||||  ||||||||||||| | ||||  || |||  |||||||||  | ||||||||||||||||| ||||||||    
T  8039522 accttgccccact---ccacaacacaccaccagaaaataaaacatggaacaattcaaaatgaaaaaagtctcctccgtttcgaagaggaactaaaacaac 8039618  T
Q  480 caaa 483  Q
    ||||    
T  8039619 caaa 8039622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 8e-59; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 280 - 475
Target Start/End: Original strand, 38499409 - 38499604
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||| ||  ||||||||||||||| |||||||    
T  38499409 aagtcagactcttctctccaccgatccaccaaaacaacatcgtcgacagcactacaaaaccaccacgtcatcgccgccttcaccttctatcatcgccaaa 38499508  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaa 475  Q
    | ||||||||||||||| ||| |||||||| | ||||||||||||||||||  || || | |||||||||  ||||||||||||||||||||||||    
T  38499509 accgtgccctactccactacaacacaccaacaaaaaataaaacacgcaacatttcaaatcgaaaaaagtctccgccgtttcgaagaggaacaaaaa 38499604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 280 - 484
Target Start/End: Original strand, 10182276 - 10182478
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||| ||||| |||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||  |||||||| |||||| |||||||    
T  10182276 aagtcggactcttctctccaccgatccaccaaaa-agcatcgtcgccaccactgcaaaaccaccacgtcatcaccaccttcacctcctatcaccgccaaa 10182374  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    | |||| |||||||||||||| |||||||| |||||||| ||||| |||||  |  |||   ||||| ||| || |||||||||| ||||||||||||||    
T  10182375 accgtgacctactccaccacaacacaccaacagaaaatagaacacacaacaatttaaaatggaaaaa-tcgccgtcgtttcgaagtggaacaaaaacaac 10182473  T
Q  480 caaaa 484  Q
    |||||    
T  10182474 caaaa 10182478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 280 - 484
Target Start/End: Original strand, 11387658 - 11387861
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |  ||||||||||||||| || ||||    
T  11387658 aagtcagactcttctctccaccgatccaccaaaacagcatagtcgacaccactgcaaaaccaccacgtcatcatcaccttcaccttctatcatcgtcaaa 11387757  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    ||| |||| |||||||||||| ||||| || ||||||||||||||||||||  || ||| | ||||||||   ||| ||||||| |||||||||||||||    
T  11387758 atcatgccatactccaccacaacacacaaacagaaaataaaacacgcaacaattctaaa-cgaaaaagtctctgccatttcgaataggaacaaaaacaac 11387856  T
Q  480 caaaa 484  Q
    |||||    
T  11387857 caaaa 11387861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 280 - 484
Target Start/End: Complemental strand, 46742815 - 46742611
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||| ||||| |||||||||| ||||||||||||| ||| |||| ||||| || |||| |||||||||||||||  |||||||||  |||| |||||||    
T  46742815 aagtcggactcttctctccaccaatccaccaaaacagcatcgtcgccaccattgtaaaatcaccacgtcatcaccaccttcaccttacatcaccgccaaa 46742716  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    |   || |||||||||||||| |||||||| |||||||| |||||||||||  || |||| ||||||||||||| |||||||||||||||||||||||||    
T  46742715 actatgacctactccaccacaacacaccaacagaaaatagaacacgcaacaattcaaaacgaaaaaagtcgtcgtcgtttcgaagaggaacaaaaacaac 46742616  T
Q  480 caaaa 484  Q
    |||||    
T  46742615 caaaa 46742611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 11387559 - 11387589
Alignment:
Q  197 gaaaacagctacgacgttttcgatgctctct 227  Q
    |||||||||||||||||||||||||||||||    
T  11387559 gaaaacagctacgacgttttcgatgctctct 11387589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 280 - 484
Target Start/End: Original strand, 1533485 - 1533689
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||| ||||| |||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||||  |||||||||  |||| |||||||    
T  1533485 aagtcggactcttctctccaccgatccaccaaaacagcatcgtcgccaccactgtaaaaccaccacgtcatcaccaccttcaccttacatcaccgccaaa 1533584  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaacaggtcgaaaccaaaaaagtcgtcgccgtttcgaagaggaacaaaaacaac 479  Q
    |   || |||||||||||||| |||||||| |||||||| |||||||||||  || |||| |||||||||||||  ||||||||||||||||||||||||    
T  1533585 actatgacctactccaccacaacacaccaacagaaaatagaacacgcaacaattcaaaacgaaaaaagtcgtcgttgtttcgaagaggaacaaaaacaac 1533684  T
Q  480 caaaa 484  Q
    |||||    
T  1533685 caaaa 1533689  T

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Target: scaffold0005 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 280 - 430
Target Start/End: Original strand, 270547 - 270697
Alignment:
Q  280 aagtcagactcatctctccaccgatccaccaaaacaacattgtcgacaccactgcaaaaccaccacgtcatcaccctcttcaccttctatcaacgccaaa 379  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  270547 aagtcagactcttctctccaccgatccaccaaaacagtatcgtcgacaccactgcaaaaccaccacgtcatcaccaccttcaccttctatcatcgccaaa 270646  T
Q  380 atcgtgccctactccaccacagcacaccaatagaaaataaaacacgcaaca 430  Q
    | ||||||||||||||||||| ||| |||| |  |||||||||||| ||||    
T  270647 accgtgccctactccaccacaacacgccaacattaaataaaacacgtaaca 270697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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