View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12929_low_17 (Length: 434)

Name: NF12929_low_17
Description: NF12929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12929_low_17
NF12929_low_17
[»] chr7 (9 HSPs)
chr7 (1-374)||(28287646-28288015)
chr7 (5-108)||(28321264-28321367)
chr7 (1-95)||(28310686-28310780)
chr7 (1-84)||(28297198-28297281)
chr7 (8-104)||(28331746-28331842)
chr7 (264-320)||(43542440-43542496)
chr7 (264-320)||(33117877-33117933)
chr7 (264-320)||(27986229-27986284)
chr7 (259-311)||(32595209-32595261)
[»] chr2 (3 HSPs)
chr2 (258-313)||(18497212-18497267)
chr2 (267-320)||(28694387-28694440)
chr2 (264-313)||(38766288-38766337)
[»] chr8 (6 HSPs)
chr8 (264-314)||(373750-373800)
chr8 (267-320)||(5374616-5374669)
chr8 (260-320)||(37288371-37288431)
chr8 (267-320)||(40439758-40439811)
chr8 (267-319)||(23052267-23052319)
chr8 (259-313)||(34944143-34944197)
[»] chr1 (5 HSPs)
chr1 (267-320)||(12967283-12967336)
chr1 (259-312)||(33816370-33816423)
chr1 (259-312)||(33875840-33875893)
chr1 (259-314)||(2603108-2603163)
chr1 (259-311)||(21938051-21938103)
[»] chr3 (7 HSPs)
chr3 (259-319)||(118775-118835)
chr3 (267-317)||(52551092-52551142)
chr3 (264-313)||(1214775-1214825)
chr3 (259-320)||(11225837-11225898)
chr3 (259-320)||(11236093-11236154)
chr3 (273-314)||(25630149-25630190)
chr3 (268-320)||(46879408-46879460)
[»] chr4 (4 HSPs)
chr4 (259-314)||(31063634-31063689)
chr4 (267-319)||(27918229-27918281)
chr4 (265-320)||(19529675-19529730)
chr4 (267-319)||(42170691-42170743)
[»] chr5 (1 HSPs)
chr5 (267-320)||(15711034-15711087)
[»] chr6 (1 HSPs)
chr6 (275-320)||(32109584-32109629)


Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 28288015 - 28287646
Alignment:
Q  1 tcctatgatgggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28288015 tcctatgatgggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttaca 28287916  T
Q  101 aaggaaattagtatcaaaagcttttggtagtccatggcttctggctcttccacaccttaattttcagtgtgatataaagatatatatattaaagtggacc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  28287915 aaggaaattagtatcaaaagcttttggtagtccatggcttctggctcttccacaccttaattttctgtgtgatataaagatatatatagtaaagtggacc 28287816  T
Q  201 ttataggtaatagatttactctatgtgacactccttccatccaaaattatatgttttaatgacttattttacaaaaatatcttttattaatggcatggaa 300  Q
    |||||||||||||||||||| || |||||||||||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  28287815 ttataggtaatagatttactgtacgtgacactccttccatccaaaat--tacgttttaatgagttattttacaaaaatatcttttattaatggcatggaa 28287718  T
Q  301 aacataaattaaaataattgnnnnnnnnntaaagtaataactagtaaattgcatgatggaaaaataatcattaa 374  Q
    || |||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  28287717 aatataaattaaaataattg--aaaaaaataaagtaataactagtaaattgcatgatggaaaaataatcattaa 28287646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 28321264 - 28321367
Alignment:
Q  5 atgatgggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttacaaagg 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||| ||| |||||||||||||||    
T  28321264 atgatgggaagtggctttggccctggtggaagtttagtagaattttgggtttggtttgattttctaagaatgaagatgagaatggttgcacttacaaagg 28321363  T
Q  105 aaat 108  Q
    ||||    
T  28321364 aaat 28321367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28310686 - 28310780
Alignment:
Q  1 tcctatgatgggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcac 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||| ||||    
T  28310686 tcctatgatgggaagtggttttggccctggtggaagttttgtagaattttgagtttggtttaattttttaaaaatgaagatgagaatgctcgcac 28310780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28297198 - 28297281
Alignment:
Q  1 tcctatgatgggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgag 84  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||    
T  28297198 tcctatgatgggaagtgggtatggccctggtggaagtttagtagaattttgggtttggattaattttctaagaatgaagatgag 28297281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 28331746 - 28331842
Alignment:
Q  8 atgggaagtggctttggccctggtggaagttttgtagaattttgagtttggtttaattttctaagaatgaggatgaggatgcttgcacttacaaagg 104  Q
    ||||||| ||| ||||||||||||||||| || || |||||||| ||||| || | |||||||| ||| | |||||| |||||||||||| ||||||    
T  28331746 atgggaaatgggtttggccctggtggaagcttggtggaattttgggtttgtttaacttttctaataataaagatgagaatgcttgcacttgcaaagg 28331842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 43542496 - 43542440
Alignment:
Q  264 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||    
T  43542496 ttattttacaaaaatatcatttattaatagcatggaaaacgtaaattaaaagaattg 43542440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 33117877 - 33117933
Alignment:
Q  264 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    |||||||||||||||||||||||||||||  ||||||||||| || ||||| |||||    
T  33117877 ttattttacaaaaatatcttttattaatgaaatggaaaacatgaactaaaagaattg 33117933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 27986284 - 27986229
Alignment:
Q  264 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    |||||||| ||||| ||||||||||||||| ||| |||||||||||||||| |||||    
T  27986284 ttattttaaaaaaa-atcttttattaatggaatgaaaaacataaattaaaagaattg 27986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 32595209 - 32595261
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaatta 311  Q
    |||| |||||||| ||||||||| ||||||||||| ||  |||||||||||||    
T  32595209 atgagttattttataaaaatatcctttattaatggtataaaaaacataaatta 32595261  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 18497267 - 18497212
Alignment:
Q  258 aatgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaa 313  Q
    ||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  18497267 aatgagttattttacaaaaatatattttattaatggtttggaaaacataaattaaa 18497212  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 28694387 - 28694440
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    ||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  28694387 ttttacaaaaatattctttattaatggtatgaaaaacataaattaaaataattg 28694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Complemental strand, 38766337 - 38766288
Alignment:
Q  264 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaa 313  Q
    ||||||||||||| |||| || ||||||||||||| ||| ||||||||||    
T  38766337 ttattttacaaaactatccttcattaatggcatgggaaaaataaattaaa 38766288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 373750 - 373800
Alignment:
Q  264 ttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaa 314  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||||    
T  373750 ttattttacaaaaatatcttttattaattgtatggaaaatataaattaaaa 373800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 5374669 - 5374616
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    ||||||||||||||| ||||||||||  |||||||||||||| |||||||||||    
T  5374669 ttttacaaaaatatcatttattaatgatatggaaaacataaaataaaataattg 5374616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 37288371 - 37288431
Alignment:
Q  260 tgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    |||||| |||||||||||||| |||||||||| | ||| |||| |||||||||||||||||    
T  37288371 tgacttgttttacaaaaatattttttattaattgtatgaaaaatataaattaaaataattg 37288431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 40439758 - 40439811
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    ||||||||||||||| || | |||||| |||||||||||||||||||| |||||    
T  40439758 ttttacaaaaatatccttcactaatggtatggaaaacataaattaaaagaattg 40439811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 23052319 - 23052267
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 319  Q
    ||||||||| ||||| || |||||||| ||||||||||| |||||||||||||    
T  23052319 ttttacaaagatatccttcattaatggtatggaaaacattaattaaaataatt 23052267  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 34944197 - 34944143
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaa 313  Q
    |||| ||||||||| |||||||| || |||||||  |||||||||||||||||||    
T  34944197 atgagttattttactaaaatatccttcattaatgatatggaaaacataaattaaa 34944143  T

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Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 12967336 - 12967283
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||    
T  12967336 ttttacaaaaatatcctttattaatggtatggaaaacataaataaaaagaattg 12967283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 33816423 - 33816370
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaa 312  Q
    |||| ||||| ||| |||||||| || |||||||||||||||||||||||||||    
T  33816423 atgagttattatacgaaaatatcattcattaatggcatggaaaacataaattaa 33816370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 33875893 - 33875840
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaa 312  Q
    |||| ||||| ||| |||||||| || |||||||||||||||||||||||||||    
T  33875893 atgagttattatacgaaaatatcattcattaatggcatggaaaacataaattaa 33875840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 2603163 - 2603108
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaa 314  Q
    |||| |||||||||||||||||| || ||||| |  ||||||||||||||||||||    
T  2603163 atgagttattttacaaaaatatcattcattaacgatatggaaaacataaattaaaa 2603108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 21938103 - 21938051
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaatta 311  Q
    |||| ||||||||||||||||||||| |||| ||| |||  ||||||||||||    
T  21938103 atgaattattttacaaaaatatctttcattagtggtatgataaacataaatta 21938051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 118835 - 118775
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 319  Q
    |||| |||||||||||||||||| || |||||||| |||| ||||||||||||||| ||||    
T  118835 atgagttattttacaaaaatatcattaattaatggtatggtaaacataaattaaaagaatt 118775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 52551092 - 52551142
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataa 317  Q
    |||| |||||||||| ||||||||||| ||| |||||||||||||||||||    
T  52551092 ttttgcaaaaatatcatttattaatggtatgaaaaacataaattaaaataa 52551142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 1214775 - 1214825
Alignment:
Q  264 ttattttacaaaaa-tatcttttattaatggcatggaaaacataaattaaa 313  Q
    |||||||||||||| |||| ||||||| ||| |||||||||||||||||||    
T  1214775 ttattttacaaaaaatatcctttattattggtatggaaaacataaattaaa 1214825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 11225898 - 11225837
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    |||| ||||||||||||||||||||| ||||||   |||||||| ||| ||||||| |||||    
T  11225898 atgaattattttacaaaaatatctttcattaatcatatggaaaaaatacattaaaagaattg 11225837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 11236154 - 11236093
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    |||| ||||||||| |||| |||||||||||||   |||||||| ||||||||||| |||||    
T  11236154 atgagttattttactaaaacatcttttattaattatatggaaaatataaattaaaagaattg 11236093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 25630190 - 25630149
Alignment:
Q  273 aaaaatatcttttattaatggcatggaaaacataaattaaaa 314  Q
    ||||||||| ||||||||||| || |||||||||||||||||    
T  25630190 aaaaatatcctttattaatggtatcgaaaacataaattaaaa 25630149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 46879408 - 46879460
Alignment:
Q  268 tttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    |||| ||||||||| |||||||||   |||||||||||||||||||| |||||    
T  46879408 tttataaaaatatcatttattaataatatggaaaacataaattaaaagaattg 46879460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 31063689 - 31063634
Alignment:
Q  259 atgacttattttacaaaaatatcttttattaatggcatggaaaacataaattaaaa 314  Q
    |||| |||||||||||||||||| || | |||||| ||||||||||||||||||||    
T  31063689 atgagttattttacaaaaatatccttcactaatggtatggaaaacataaattaaaa 31063634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 27918229 - 27918281
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 319  Q
    ||||||| ||||||| ||||||||| | |||||||||||||||||||| ||||    
T  27918229 ttttacataaatatcatttattaatagtatggaaaacataaattaaaagaatt 27918281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 19529675 - 19529730
Alignment:
Q  265 tattttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    ||||||||||||||||  ||||||||||| ||||||||| ||||| |||| |||||    
T  19529675 tattttacaaaaatattctttattaatggtatggaaaacctaaataaaaagaattg 19529730  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 42170743 - 42170691
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataatt 319  Q
    ||||||||||||||| ||  |||||||  ||||||||||||||||||| ||||    
T  42170743 ttttacaaaaatatcattcgttaatggtgtggaaaacataaattaaaagaatt 42170691  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 15711034 - 15711087
Alignment:
Q  267 ttttacaaaaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    ||||| ||||||||| || |||||||| |||||||||||||||||||| |||||    
T  15711034 ttttataaaaatatcattcattaatggtatggaaaacataaattaaaagaattg 15711087  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 32109584 - 32109629
Alignment:
Q  275 aaatatcttttattaatggcatggaaaacataaattaaaataattg 320  Q
    ||||||| || |||||||| |||||||||||||||||||| |||||    
T  32109584 aaatatcattcattaatggtatggaaaacataaattaaaagaattg 32109629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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