View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12929_low_32 (Length: 352)

Name: NF12929_low_32
Description: NF12929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12929_low_32
NF12929_low_32
[»] chr7 (4 HSPs)
chr7 (17-334)||(34293852-34294168)
chr7 (17-191)||(10365418-10365593)
chr7 (17-191)||(32978745-32978918)
chr7 (97-191)||(31038620-31038716)
[»] chr1 (12 HSPs)
chr1 (17-191)||(47896349-47896525)
chr1 (17-191)||(8038864-8039039)
chr1 (17-191)||(27787185-27787360)
chr1 (23-191)||(4654120-4654289)
chr1 (18-191)||(25537235-25537411)
chr1 (65-191)||(10494319-10494448)
chr1 (105-191)||(26842701-26842787)
chr1 (97-191)||(15495508-15495604)
chr1 (102-191)||(40581081-40581171)
chr1 (65-191)||(14351723-14351853)
chr1 (60-188)||(11814175-11814306)
chr1 (142-191)||(29099063-29099114)
[»] chr6 (5 HSPs)
chr6 (17-191)||(11366388-11366561)
chr6 (17-191)||(9566470-9566638)
chr6 (81-191)||(31026777-31026892)
chr6 (97-191)||(78406-78502)
chr6 (59-191)||(10670484-10670618)
[»] chr8 (4 HSPs)
chr8 (17-191)||(38498866-38499039)
chr8 (17-191)||(10181587-10181762)
chr8 (17-191)||(15050482-15050658)
chr8 (136-191)||(39582155-39582211)
[»] chr2 (5 HSPs)
chr2 (15-184)||(27888306-27888476)
chr2 (17-191)||(1532826-1533000)
chr2 (75-191)||(6705141-6705259)
chr2 (17-160)||(9910131-9910274)
chr2 (18-191)||(6186758-6186933)
[»] chr5 (6 HSPs)
chr5 (15-191)||(26331861-26332039)
chr5 (34-160)||(26331538-26331664)
chr5 (59-189)||(24867554-24867687)
chr5 (75-191)||(40680507-40680625)
chr5 (162-191)||(11470348-11470377)
chr5 (97-191)||(42220945-42221041)
[»] chr3 (4 HSPs)
chr3 (18-191)||(46743332-46743507)
chr3 (17-191)||(52991744-52991919)
chr3 (97-191)||(3460963-3461059)
chr3 (158-191)||(52700601-52700634)
[»] chr4 (5 HSPs)
chr4 (19-191)||(12130141-12130314)
chr4 (65-191)||(42678091-42678218)
chr4 (17-191)||(56092748-56092924)
chr4 (65-191)||(14440735-14440864)
chr4 (65-184)||(45872656-45872778)
[»] scaffold0005 (1 HSPs)
scaffold0005 (17-191)||(269590-269758)
[»] scaffold0083 (1 HSPs)
scaffold0083 (34-191)||(2665-2824)


Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 17 - 334
Target Start/End: Original strand, 34293852 - 34294168
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||  | || ||||||||||| |||| ||||||||||||||||||||    
T  34293852 gggtgtttttggtttacttgtaaaagtttatatttgataca-tgggtgtttgtttgagtattccgcatatatacggacacttttcctttgtatggtgctc 34293950  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattctatgttttaaataaatttcattttagcttcttnnnnnnnnncatctaaccacataat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||||||||    
T  34293951 tttcagtcttctagcttaacattttttgtgcttgctaggattctgtgttttaaataaatttcattttagcttcttaaaaaaaaacatctaaccacataat 34294050  T
Q  217 ttgatataccatttatatataggtatgcatatttaaacaattaaatcatatttttatggaaaaatagtttaaatgaatggtaaaataggatggaaaacac 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34294051 ttgatataccatttatatataggtatgcatatttaaacaattaaatcatatttttatggaaaaatagtttaaatgaatggtaaaataggatggaaaacac 34294150  T
Q  317 gttacttcaactttcagt 334  Q
    ||||||||||||||||||    
T  34294151 gttacttcaactttcagt 34294168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 10365593 - 10365418
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    ||||||||||||||| || ||||||| |||||||||||||| || || ||||||||| |||| | ||||||||||| || |||||| || ||||||||||    
T  10365593 gggtgtttttggtttgctcgtaaaagtttatatttgataca-tgagtgtttgtttggctgttgcacatatatacagtcacttttcccttctatggtgctc 10365495  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
    ||| |||||||||||||| |||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  10365494 tttaagtcttctagcttagcattctttgtgcttgctaggattctttgtgttttaaataaatttcattttagcttctt 10365418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 32978918 - 32978745
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    ||||||||||  ||| |||||| ||| || | ||||||||| || || ||||||||| || | |||||||| ||||||| ||||| ||| |||| | |||    
T  32978918 gggtgttttttatttgcttgtagaagtttgtttttgataca-tgagtgtttgtttggatgatccgcatataaacagacacttttcttttatatgttactc 32978820  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattctatgttttaaataaatttcattttagcttctt 191  Q
    ||| |||||  |||||||| |||  || |||||||||||||||| |||||||| |||||||||||||| ||||||    
T  32978819 tttaagtctcatagcttaatattccttatgcttgctaggattctgtgttttaattaaatttcattttaacttctt 32978745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 31038716 - 31038620
Alignment:
Q  97 ttttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctat--gttttaaataaatttcattttagcttctt 191  Q
    |||||||||||||| |||| ||| ||| |  |||| || ||||  ||||||| | || |||||| |  |||||||||||||||||||||||||||||    
T  31038716 ttttcctttgtatgttgctatttaagtatcttagcctagcattccttgtgctagataagattctttacgttttaaataaatttcattttagcttctt 31038620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 47896525 - 47896349
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    ||||||||||||||| || ||||||| |||||||||||||| ||||| ||||||||| |||| ||||||||||| |||| |||| ||||||||| |||||    
T  47896525 gggtgtttttggtttgctcgtaaaagtttatatttgataca-tgggtgtttgtttggatgttccgcatatatacggacactttttctttgtatgttgctc 47896427  T
Q  117 -tttcagtcttctagcttaacattttttgtgcttgctaggattctatg--ttttaaataaatttcattttagcttctt 191  Q
     ||| ||||||||| |||||||||  || |||||||||||||||| ||  ||||||||||||||||||||| ||||||    
T  47896426 ttttaagtcttctaacttaacattccttatgcttgctaggattctttgtattttaaataaatttcattttaacttctt 47896349  T

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Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 8039039 - 8038864
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    ||||||||||||| | || ||||||| ||||||||||| || || || ||||||||| |||| |||||||||||| ||| ||||||||| ||||||| ||    
T  8039039 gggtgtttttggtctgctcgtaaaagtttatatttgatgca-tgagtgtttgtttgggtgttccgcatatatacatacacttttcctttatatggtgttc 8038941  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctagga--ttctatgttttaaataaatttcattttagcttctt 191  Q
    ||| |||||||||||||| ||||  |||||||||||||||  || | ||||||||||||||||||||||||||||||    
T  8038940 tttaagtcttctagcttagcattccttgtgcttgctaggattttttgtgttttaaataaatttcattttagcttctt 8038864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 27787185 - 27787360
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    ||||||||||| ||| |||||| ||| || ||||||||||| ||| | ||||||||| |||| ||||||||||  |||| ||||| |||||||| || ||    
T  27787185 gggtgtttttgatttgcttgtagaagtttgtatttgataca-tggctgtttgtttgggtgttccgcatatatatggacacttttcgtttgtatgttgttc 27787283  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattctatgt--tttaaataaatttcattttagcttctt 191  Q
    ||| ||||| |||||||| ||||  |||||||||||| |||||| |||  |||||||||||||||||||||||||||    
T  27787284 tttaagtctcctagcttagcattccttgtgcttgctaagattctttgtgctttaaataaatttcattttagcttctt 27787360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 4654120 - 4654289
Alignment:
Q  23 ttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctctttcag 122  Q
    ||||||||| || ||||||  |||||||||||||| || || ||| ||||  |||| | |||||||| ||||| ||| |||||||||| |||||||| ||    
T  4654120 ttttggtttgctcgtaaaaatttatatttgataca-tgagtgtttatttgagtgttccacatatatagagacactttccctttgtatgttgctctttaag 4654218  T
Q  123 tcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
    |||||||||||| ||||   |||||||||||||||||  | |||||||||||| |||||||||||||||||    
T  4654219 tcttctagcttagcattccctgtgcttgctaggattctttgtgttttaaataattttcattttagcttctt 4654289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 25537411 - 25537235
Alignment:
Q  18 ggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgctc 116  Q
    ||||||||||||||  ||||| ||| || ||||||||||| ||||| ||||||||  |||| ||||||||||| | ||| ||||||| |||||| || |     
T  25537411 ggtgtttttggtttgtttgtagaagtttgtatttgataca-tgggtgtttgtttgtgtgttccgcatatatacgacacacttttcctgtgtatgttgttt 25537313  T
Q  117 tttca-gtcttctagcttaacattttttgtgcttgctaggattctatg--ttttaaataaatttcattttagcttctt 191  Q
    ||| | |||| ||||| || |||| |||||||||||||||||||| ||  | |||||||||| |||||||||||||||    
T  25537312 ttttaagtctcctagcctagcattctttgtgcttgctaggattctttgcatgttaaataaatatcattttagcttctt 25537235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 10494448 - 10494319
Alignment:
Q  65 tttgtttggttgttacgcatatatacag-acaattttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctat- 162  Q
    ||||||||| ||||  |||||||||||  ||| |||||||||||||| |||| ||| ||||| |||||   |||||  ||||||||||||||||||| |     
T  10494448 tttgtttgggtgttctgcatatatacaacacacttttcctttgtatgttgctatttaagtctcctagccagacattccttgtgcttgctaggattctttg 10494349  T
Q  163 -gttttaaataaatttcattttagcttctt 191  Q
     ||||| |||||||||||||||||||||||    
T  10494348 cgttttgaataaatttcattttagcttctt 10494319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 26842787 - 26842701
Alignment:
Q  105 tgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctatgttttaaataaatttcattttagcttctt 191  Q
    |||||| |||| ||| ||||| ||| | || ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26842787 tgtatgttgctttttaagtctcctaacctagcattccttgtgcttgctaggattctgtgttttaaataaatttcattttagcttctt 26842701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 15495604 - 15495508
Alignment:
Q  97 ttttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattcta--tgttttaaataaatttcattttagcttctt 191  Q
    |||||||||||||| |||| ||| ||||| ||||| || ||||| |||||| ||||| ||||||   ||||||||||||||||||||||||||||||    
T  15495604 ttttcctttgtatgttgctttttaagtctcctagcctagcatttcttgtgcatgctatgattcttagtgttttaaataaatttcattttagcttctt 15495508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 40581081 - 40581171
Alignment:
Q  102 ctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctatgt--tttaaataaatttcattttagcttctt 191  Q
    ||||||||| |||| ||| |||||||||||||| ||||  |||||||||||| |||||| |||  |||||||||||||||||||||||||||    
T  40581081 ctttgtatgttgct-tttaagtcttctagcttagcattccttgtgcttgctaagattctttgtgttttaaataaatttcattttagcttctt 40581171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 14351723 - 14351853
Alignment:
Q  65 tttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgct-ctttcagtcttctagcttaacattttttgtgcttgctaggattctat 162  Q
    ||||||||| |||| ||||||||||| | ||| |||||||||||||| |||| |||| ||  | ||||  || ||||  ||||||| ||||||||||| |    
T  14351723 tttgtttgggtgttccgcatatatacgacacacttttcctttgtatgttgctactttaagattcctagtctagcattccttgtgctcgctaggattcttt 14351822  T
Q  163 g--ttttaaataaatttcattttagcttctt 191  Q
    |  |||| |||||||||||||||||||||||    
T  14351823 gcattttgaataaatttcattttagcttctt 14351853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 188
Target Start/End: Complemental strand, 11814306 - 11814175
Alignment:
Q  60 gggtatttgtttggttgttacgcatatatacag-acaattttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggatt 158  Q
    |||| ||||||||| |||| ||||||||||  | ||||| |||||||||||| |||| ||| ||||| |||||  | | ||  || |||||| |||||||    
T  11814306 gggtgtttgtttgggtgtttcgcatatataaggcacaatgttcctttgtatgttgctatttaagtctcctagccaagctttccttctgcttgttaggatt 11814207  T
Q  159 ctatg--ttttaaataaatttcattttagctt 188  Q
    || ||  |||| ||||||||||||||||||||    
T  11814206 ctttgcgttttgaataaatttcattttagctt 11814175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 29099114 - 29099063
Alignment:
Q  142 ttgtgcttgctaggattctatgt--tttaaataaatttcattttagcttctt 191  Q
    ||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  29099114 ttgtgcttgctaggattctttgtgttttaaataaatttcattttaacttctt 29099063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 11366561 - 11366388
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    ||||||||||| ||| || ||||||| |||| ||||||||| || || ||||||||| |||| ||||||||||| |||| |||||||||||||| |||||    
T  11366561 gggtgtttttgatttgctcgtaaaagtttatgtttgataca-tgagtgtttgtttgggtgttccgcatatatacggacacttttcctttgtatgttgctc 11366463  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattctatgttttaaataaatttcattttagcttctt 191  Q
    ||| |||||| ||| ||| ||||  || |||||||||  ||||| ||||||||||||||||||||||| ||||||    
T  11366462 tttaagtcttttaggttagcattccttatgcttgctaaaattctgtgttttaaataaatttcattttaacttctt 11366388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 9566638 - 9566470
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    |||||||||||||||||||||||||| |||||||||||| | || || ||||||||  | || ||||||||||| |||| |||||||||| ||||||||     
T  9566638 gggtgtttttggtttacttgtaaaagtttatatttgataga-tgagtgtttgtttgagtattccgcatatatacggacacttttcctttgcatggtgct- 9566541  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
    ||| |||  |||      |||||  ||||||||||||||||||  | ||||||||||||||||||||||| ||||||    
T  9566540 tttaagttctct------acattccttgtgcttgctaggattctttgtgttttaaataaatttcattttaacttctt 9566470  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 31026777 - 31026892
Alignment:
Q  81 gcatatatacag-acaattttcctttgta--tggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattct--atgttttaaataaat 175  Q
    |||||||||| | ||| ||||||||||||  || |||| ||| ||||||||||| |||||||| || ||||||||||||||||   ||||||||||||||    
T  31026777 gcatatatacggcacacttttcctttgtaaatgttgctttttaagtcttctagcctaacatttcttatgcttgctaggattcttagtgttttaaataaat 31026876  T
Q  176 ttcattttagcttctt 191  Q
    ||||||||| ||||||    
T  31026877 ttcattttaacttctt 31026892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 78502 - 78406
Alignment:
Q  97 ttttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctat--gttttaaataaatttcattttagcttctt 191  Q
    |||||||||||||| | || ||| ||||| |||||  | ||||| ||||||||||||||||||| |  ||||| |||||| ||||||||||||||||    
T  78502 ttttcctttgtatgttcctatttaagtctcctagccaagcatttcttgtgcttgctaggattctttgcgttttgaataaacttcattttagcttctt 78406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 10670484 - 10670618
Alignment:
Q  59 tgggtatttgtttggttgttacgcatatatacagacaa--ttttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctagga 156  Q
    ||||| ||||||||| ||||  |||||||||| |||||  |||||||||||||| || | ||| ||||| ||| |||| ||||  ||||||||  ||| |    
T  10670484 tgggtgtttgtttggatgttctgcatatatac-gacaaacttttcctttgtatgttgttttttaagtctcctaacttagcattacttgtgcttattagaa 10670582  T
Q  157 ttctatgttttaaataaattt-cattttagcttctt 191  Q
    ||||  ||||||||||||||| ||||||| ||||||    
T  10670583 ttctgggttttaaataaatttccattttaacttctt 10670618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 38499039 - 38498866
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    ||||||||||||||||||  |||||| ||||||| |||||| ||||| ||||||||| |||| |||||||   | |||| |||||||||||||| |||||    
T  38499039 gggtgtttttggtttactcataaaagtttatattcgataca-tgggtgtttgtttgggtgttccgcatatg--cggacacttttcctttgtatgttgctc 38498943  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
    ||| |||||| | ||||||||||   |||||||||||||||||  | ||||||||||||||||||||||| ||||||    
T  38498942 tttaagtcttatggcttaacattccctgtgcttgctaggattctttgtgttttaaataaatttcattttaacttctt 38498866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 10181762 - 10181587
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttg-tttggttgttacgcatatatacagacaattttcctttgtatggtgct 115  Q
    ||||||||||||||| |||||| ||| || | ||||||||| |  || |||| ||||| |||| |||||||||||||||| || ||||||||||| ||||    
T  10181762 gggtgtttttggtttgcttgtagaagtttgtttttgataca-tatgtgtttgttttggatgttccgcatatatacagacacttctcctttgtatgttgct 10181664  T
Q  116 ctttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
     ||| |||||  ||||||||||||| || | |||| ||||||||  | |||||| |||||||||||||||||||||||    
T  10181663 -tttaagtctcttagcttaacatttcttatacttgttaggattctttgtgttttcaataaatttcattttagcttctt 10181587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 15050482 - 15050658
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacag-acaattttcctttgtatggtgct 115  Q
    |||||||||||||||  ||||| ||| || ||||||||||| ||||| ||||||||  |||| ||||||||||| | ||| ||||||| |||||| || |    
T  15050482 gggtgtttttggtttgtttgtagaagtttgtatttgataca-tgggtgtttgtttgtgtgttccgcatatatacggcacacttttcctgtgtatgttgtt 15050580  T
Q  116 ctttcagtcttctagcttaacattttttgtgcttgctaggattctatg--ttttaaataaatttcattttagcttctt 191  Q
     ||| | ||| ||||| || ||||  ||||||||||||| ||||| ||  | ||||||||||||||||||||||||||    
T  15050581 ttttaattctcctagcctagcattccttgtgcttgctagaattctttgcatgttaaataaatttcattttagcttctt 15050658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 39582155 - 39582211
Alignment:
Q  136 cattttttgtgcttgctaggattctatgtttt-aaataaatttcattttagcttctt 191  Q
    |||| |||||||||| ||||||| | |||||| |||||||||| |||||||||||||    
T  39582155 cattctttgtgcttgttaggattgtgtgtttttaaataaattttattttagcttctt 39582211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 27888476 - 27888306
Alignment:
Q  15 gtgggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgc 114  Q
    ||||||||||||  ||| |||||  ||| || ||||||||||| || || ||||||||| |||| ||||||||||| |||| |||||||||||||| |||    
T  27888476 gtgggtgttttttatttgcttgtggaagtttgtatttgataca-tgagtgtttgtttgggtgttccgcatatatacggacacttttcctttgtatgttgc 27888378  T
Q  115 tctttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcatttta 184  Q
    ||||| | ||| |||| ||| ||||  ||||||||||||||||||  |||||||||||||||||||||||||    
T  27888377 tctttaattctcctagtttagcattcgttgtgcttgctaggattctttatgttttaaataaatttcatttta 27888306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 1533000 - 1532826
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    |||||||||||||||||||||| ||| || ||||||||||| ||| |  |||||||| |||| |||||||||| ||||| ||||| |||||||| |||||    
T  1533000 gggtgtttttggtttacttgtagaagtttgtatttgataca-tggatgattgtttggatgttccgcatatatatagacacttttcgtttgtatgttgctc 1532902  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
    ||| | ||| ||| ||| | |||  |||| |||  ||||||||  | ||||| ||||||||||||||||| ||||||    
T  1532901 tttaaatctcctaactt-agattccttgtacttattaggattctttgtgtttgaaataaatttcattttaccttctt 1532826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 6705259 - 6705141
Alignment:
Q  75 tgttacgcatatatac-agacaattttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattcta-tgttttaaata 172  Q
    |||| ||||||||||| | ||| |||||||||||||| || | ||| ||||| ||||| || ||||  || |||||||| ||||  || |||||||||||    
T  6705259 tgttccgcatatatacgacacacttttcctttgtatgttgttttttaagtctcctagcctagcattccttatgcttgctgggatcttagtgttttaaata 6705160  T
Q  173 aatttcattttagcttctt 191  Q
    |||||||||||||||||||    
T  6705159 aatttcattttagcttctt 6705141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 9910274 - 9910131
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgct 115  Q
    |||||||||||||||   |||| ||| ||||||||||  || ||||| ||||||||| |||| ||||||||||| | ||| |||||||||||||| | ||    
T  9910274 gggtgtttttggtttgtatgtagaagtttatatttgaatca-tgggtgtttgtttggatgttccgcatatatacgacacacttttcctttgtatgttcct 9910176  T
Q  116 ctttcagtcttctagcttaacattttttgtgcttgctaggattct 160  Q
      || |||||  ||||  ||||||  |||||||||||| ||||||    
T  9910175 acttaagtctcatagccaaacattccttgtgcttgctacgattct 9910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 6186758 - 6186933
Alignment:
Q  18 ggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgct-c 116  Q
    ||||||||||||||  ||||| ||| |||||||||||  | ||  | ||||||||| || | |||||||||| | ||| ||||| |||||||| | || |    
T  6186758 ggtgtttttggtttgtttgtagaagtttatatttgatgaa-tgattgtttgtttgggtgctccgcatatatatacacacttttcatttgtatgtttctac 6186856  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattctatg--ttttaaataaatttcattttagcttctt 191  Q
    ||| ||  | ||||  || ||||  ||||||| ||||||||||| ||  |||| |||||||||||||||||||||||    
T  6186857 tttaagattcctagtctagcattgcttgtgctcgctaggattctttgcattttgaataaatttcattttagcttctt 6186933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 26331861 - 26332039
Alignment:
Q  15 gtgggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtg 113  Q
    ||||||||||||| ||   ||||| |||||| ||||||||||| || || ||||||||| |||| ||||||||||| | ||| |||||||||||||| ||    
T  26331861 gtgggtgtttttgattcgtttgtagaagattgtatttgataca-tgagtgtttgtttggatgttccgcatatatacgaaacacttttcctttgtatgttg 26331959  T
Q  114 ctctttcagtcttctagcttaacattttttgtgcttgctaggattcta--tgttttaaataaatttcattttagcttctt 191  Q
    || ||| | ||| ||||| || ||||  ||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  26331960 ctttttaaatctcctagcctagcattccttgtgcttgctaggattctatttgttttaaataaatttcattttaacttctt 26332039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 26331538 - 26331664
Alignment:
Q  34 ttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgctctttcagtcttctagct 132  Q
    ||||| |||||| ||||||||||| || || ||||||||| |||| ||||||||||| | ||| |||||||||||||| |||| ||| | ||| |||||     
T  26331538 ttgtagaagattgtatttgataca-tgagtgtttgtttggatgttccgcatatatacgaaacacttttcctttgtatgttgctttttaaatctcctagcc 26331636  T
Q  133 taacattttttgtgcttgctaggattct 160  Q
    || ||||  |||||||||||||||||||    
T  26331637 tagcattccttgtgcttgctaggattct 26331664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 24867554 - 24867687
Alignment:
Q  59 tgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggat 157  Q
    ||||| ||||||||| |||| |||||||| || | ||| |||| ||||||| | |||| ||| ||||||||| | || ||||  ||||||||||||| ||    
T  24867554 tgggtgtttgtttggatgttccgcatatacacgacacattttttctttgtacgctgctttttaagtcttctaacctatcattccttgtgcttgctagtat 24867653  T
Q  158 tctatgt--tttaaataaatttcattttagcttc 189  Q
    ||| |||  |||||||||||||||||||| ||||    
T  24867654 tctttgtgttttaaataaatttcattttaacttc 24867687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 40680625 - 40680507
Alignment:
Q  75 tgttacgcatatatacag-acaattttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattcta-tgttttaaata 172  Q
    |||| ||||||||||| | ||| |||||||||||||| |||| ||| |||||  || | || ||||  ||||||||||||| ||  || |||||||||||    
T  40680625 tgttccgcatatatacggcacacttttcctttgtatgttgctttttaagtctcttaacctagcattccttgtgcttgctagaatcttagtgttttaaata 40680526  T
Q  173 aatttcattttagcttctt 191  Q
    |||||||||||| ||||||    
T  40680525 aatttcattttaccttctt 40680507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 11470377 - 11470348
Alignment:
Q  162 tgttttaaataaatttcattttagcttctt 191  Q
    ||||||||||||||||||||||||||||||    
T  11470377 tgttttaaataaatttcattttagcttctt 11470348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 191
Target Start/End: Complemental strand, 42221041 - 42220945
Alignment:
Q  97 ttttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctatg--ttttaaataaatttcattttagcttctt 191  Q
    |||||||||||||| |||| ||| ||||| ||||| || | ||  | ||||| ||||||||||| ||  |||| ||| |||||||||||||||||||    
T  42221041 ttttcctttgtatgttgctatttaagtctcctagcctagccttcctcgtgctagctaggattctttgcgttttgaattaatttcattttagcttctt 42220945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 46743332 - 46743507
Alignment:
Q  18 ggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgctc 116  Q
    |||||||||||||| |||||| ||| || ||||||||||| |||||  |||||||| |||| |||| |||||| | ||| ||||  |||||||| |||||    
T  46743332 ggtgtttttggtttgcttgtagaagtttgtatttgataca-tgggtgattgtttggatgttccgcacatatacgaaacactttttgtttgtatgttgctc 46743430  T
Q  117 tttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
    ||| | ||| ||| |||| ||||  ||||||||||||||||||  | ||||||||||||||||||||||| ||||||    
T  46743431 tttaaatctcctaacttagcattccttgtgcttgctaggattctttgtgttttaaataaatttcattttaccttctt 46743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 52991744 - 52991919
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgct 115  Q
    |||||||||||||||| ||||| ||| ||||||||||||||   ||| ||||||||  | || || |||||||| | ||||||||| | |||||| || |    
T  52991744 gggtgtttttggtttatttgtagaagtttatatttgatacaa--ggtgtttgtttgtgtattccgtatatatacgacacaattttcatgtgtatgttgtt 52991841  T
Q  116 ctttcagtcttctagcttaacattttttgtgcttgctaggattctatgt--tttaaataaatttcattttagcttctt 191  Q
     ||| ||||| ||| | || ||||| ||||| ||||||||||||| |||  |||||||||||||||||||||||||||    
T  52991842 ttttaagtctcctaacctagcatttcttgtgtttgctaggattctttgtgttttaaataaatttcattttagcttctt 52991919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 3460963 - 3461059
Alignment:
Q  97 ttttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattc--tatgttttaaataaatttcattttagcttctt 191  Q
    |||||||||||||| |||| ||| ||||||||||| || ||||  | ||||| | ||||||||  || ||||| |||||||||||||||| ||||||    
T  3460963 ttttcctttgtatgttgctatttaagtcttctagcctagcattcctcgtgctagttaggattctttacgttttgaataaatttcattttaacttctt 3461059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 52700601 - 52700634
Alignment:
Q  158 tctatgttttaaataaatttcattttagcttctt 191  Q
    ||||||||||||||||||||||||||||||||||    
T  52700601 tctatgttttaaataaatttcattttagcttctt 52700634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 12130314 - 12130141
Alignment:
Q  19 gtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacag-acaattttcctttgtatggtgctct 117  Q
    |||||||||||||  ||||||||| || |||||| |||| ||||| ||||||||| |||| ||||||||||||  ||| ||||| | |||||| |||| |    
T  12130314 gtgtttttggtttgtttgtaaaagtttctatttg-taca-tgggtgtttgtttgggtgttccgcatatatacatcacacttttcttctgtatgatgcttt 12130217  T
Q  118 ttcagtcttctagcttaacattttttgtgcttgctaggattcta--tgttttaaataaatttcattttagcttctt 191  Q
    || ||||| ||||| || ||||  || ||| ||||||||||||   ||||||||||| ||||||||||||||||||    
T  12130216 ttaagtctcctagcctagcattccttctgcatgctaggattcttagtgttttaaatagatttcattttagcttctt 12130141  T

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Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 42678091 - 42678218
Alignment:
Q  65 tttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctatg 163  Q
    ||||||||| |||| | ||||||||| ||||| ||||||||| |||| | || ||| ||||| ||||| || ||||| | ||||||||||||||||| ||    
T  42678091 tttgtttgggtgttccacatatatacgagacacttttcctttttatgttactttttaagtctcctagcctagcatttctcgtgcttgctaggattctctg 42678190  T
Q  164 ttttaaataaatttcattttagcttctt 191  Q
    ||||||| ||||| ||||||| ||||||    
T  42678191 ttttaaacaaattccattttaacttctt 42678218  T

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Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 56092748 - 56092924
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatac-agacaattttcctttgtatggtgct 115  Q
    |||||||||||||||  ||||| ||| || ||||||||||| ||| | ||||||||  |||| ||||||||||| | ||| ||||||| |||||  || |    
T  56092748 gggtgtttttggtttgtttgtagaagtttgtatttgataca-tggatgtttgtttgtgtgttccgcatatatacgacacacttttcctgtgtatattgtt 56092846  T
Q  116 ctttcagtcttctagcttaacattttttgtgcttgctaggattctatg--ttttaaataaatttcattttagcttctt 191  Q
     ||| | ||| ||||| || ||||  ||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
T  56092847 ttttaattctcctagcctagcattccttgtgcttgctaggattctttgcatgttaaataaatttcattttagcttctt 56092924  T

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Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 14440864 - 14440735
Alignment:
Q  65 tttgtttggttgttacgcatatatacagacaa--ttttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattcta- 161  Q
    ||||||||| |||| ||||||||||| |||||  |||||||| ||||  || | ||| ||||| ||||  |||||||| ||||||||| |||||||||      
T  14440864 tttgtttgggtgttccgcatatatac-gacaaacttttccttagtatattgttttttaagtctcctagtctaacatttcttgtgcttgttaggattctta 14440766  T
Q  162 -tgttttaaataaatttcattttagcttctt 191  Q
     ||||||||||||||||||||||||||||||    
T  14440765 gtgttttaaataaatttcattttagcttctt 14440735  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 45872778 - 45872656
Alignment:
Q  65 tttgtttggttgttacgcatatatacaga-caattttcctttgtatggtgctctttcagtcttctagcttaacattttttgtgcttgctaggattctatg 163  Q
    ||||||||| |||| ||||||||||| || || |||| ||||||||| || | ||| |||||  |||| ||  |||  ||||||||||||||||| ||||    
T  45872778 tttgtttgggtgttccgcatatatacggaacactttttctttgtatgttgttttttaagtctcatagcctagtattccttgtgcttgctaggattatatg 45872679  T
Q  164 t--tttaaataaatttcatttta 184  Q
    |  ||||||||||||||||||||    
T  45872678 tgttttaaataaatttcatttta 45872656  T

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Target: scaffold0005 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 269758 - 269590
Alignment:
Q  17 gggtgtttttggtttacttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacagacaattttcctttgtatggtgctc 116  Q
    |||| |||||||||| || ||||||| |||||||||||||| ||||| ||||||| | |||| ||||||| ||| |||| |||||||        |||||    
T  269758 gggtatttttggtttgctcgtaaaagtttatatttgataca-tgggtgtttgtttaggtgttccgcatatgtacggacacttttcct--------tgctc 269668  T
Q  117 -tttcagtcttctagcttaacattttttgtgcttgctaggattctat--gttttaaataaatttcattttagcttctt 191  Q
     ||| |||||||||||||| ||||| || |||||||||  ||||| |  |||||||||||||||||||||| ||||||    
T  269667 ttttaagtcttctagcttagcatttcttatgcttgctaaaattctctgagttttaaataaatttcattttaacttctt 269590  T

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Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 191
Target Start/End: Complemental strand, 2824 - 2665
Alignment:
Q  34 ttgtaaaagattatatttgatacactgggtatttgtttggttgttacgcatatatacag-acaattttcctttgtatggtgctctttcagtcttctagct 132  Q
    ||||| ||| || |||||||||||  |||| ||||||||| |||| ||||||||||| | ||| |||||||||||||| ||||  || ||||| ||||      
T  2824 ttgtagaagtttgtatttgatacaa-gggtctttgtttggatgttccgcatatatacggcacacttttcctttgtatgttgcttgttaagtctcctagtc 2726  T
Q  133 taacattttttgtgcttgctaggattctat--gttttaaataaatttcattttagcttctt 191  Q
    || ||||  ||||||||||||||||||| |  ||||| ||||| ||||||||||| |||||    
T  2725 tagcattccttgtgcttgctaggattctttgcgttttgaataagtttcattttagtttctt 2665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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