View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1292_high_22 (Length: 270)
Name: NF1292_high_22
Description: NF1292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1292_high_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 14458774 - 14458505
Alignment:
| Q |
1 |
tatgccaaacagaaactgtgtgttcaaaccagacaacgcaaaagcacatttataatcatcaactaggaagtgttaatcattgaaaaccattacagatacg |
100 |
Q |
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| T |
14458774 |
tatgccaaacagaaactgtgtgttcaaaccagacaacgtaaaagcacatttataatcatcaactaggaaatgttaatcattgaaaaccattacagatacg |
14458675 |
T |
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| Q |
101 |
agattatctccgaataacaaaactatcccttaattggttttgcatagataaattcattaatccatttcttagaaaacacaaagtcagactcacaccctaa |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
14458674 |
agattatctccgaataacaaaactgtcccttaattggttttgcatagataaattcattaatccatttcttagaaaacacaaagtcggactcacaccctaa |
14458575 |
T |
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| Q |
201 |
cccaaaaaatcatgcatgtttatcttcatttaacccaactccttaaatggctggaaaaaggtaaaacccc |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14458574 |
cccaaaaaatcatgcatgtttatcttcatttaacccaactccttaaatggctggaaaaaggtaaaacccc |
14458505 |
T |
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