View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1292_high_28 (Length: 213)
Name: NF1292_high_28
Description: NF1292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1292_high_28 |
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Alignment Details
Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 5998969 - 5998849
Alignment:
| Q |
1 |
gatagctcgtaacatggccgcatctcatcggcaacttcctcaaggtacctttcgtgacacccaatgcaatgatcacaccaaaaatcaaaacagacgtgaa |
100 |
Q |
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| T |
5998969 |
gatagctcgtaacatggccgcatctcatcggcaacttcctcaaggtacctttcgtgacacccaatgcaatgatcacaccaaaaatcaaaacagacgtgaa |
5998870 |
T |
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| Q |
101 |
cgatgtgatgcatgcgagcac |
121 |
Q |
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| T |
5998869 |
cgatgtgatgcatgcgagcac |
5998849 |
T |
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