View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1292_low_13 (Length: 434)
Name: NF1292_low_13
Description: NF1292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1292_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 96 - 426
Target Start/End: Original strand, 21388924 - 21389256
Alignment:
| Q |
96 |
ctcgcttaattactctctctcaaacacactcacactaattcttaatttagctacaccaggataaaatcctagatccacccctatcgacaactataaaaaa |
195 |
Q |
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| T |
21388924 |
ctcgcttaattactctctctcagacacactcacactaattcttaatttagctacaccaagataaaatcctagatccacccctatcgacaactataaaaaa |
21389023 |
T |
|
| Q |
196 |
gaatgcatggaatatgtattaagttgattttgaagatacaaattaattaattaatcaactataccataacaactttcaatatatttacctct--nnnnnn |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21389024 |
gaatgcatggaatatgtattaagttgattttgaagatacaaattaattaattaatcaactataccataacaactttcaatatatttacctctaaaaaaaa |
21389123 |
T |
|
| Q |
294 |
ntcaagatatttttataatttaccaaaaccgtgtagtcactagctattgtctttgtcctgcttgtgtttaatcatacatgtagtgctagctgtcactgat |
393 |
Q |
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|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21389124 |
atcaatatattttcataatttaccaaaaccgtgtagtcactagctattgtctttgtcctgcttgtgtttaatcatacatgtagtgctagctgtcactgat |
21389223 |
T |
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| Q |
394 |
ctttaatggaagtgaatttggattacctttgtt |
426 |
Q |
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||||||||||||||||| ||||||||||||||| |
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| T |
21389224 |
ctttaatggaagtgaatatggattacctttgtt |
21389256 |
T |
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