View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1292_low_54 (Length: 213)
Name: NF1292_low_54
Description: NF1292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1292_low_54 |
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Alignment Details
Target: chr4 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 30715489 - 30715624
Alignment:
| Q |
1 |
aaaccatctttctcacaagaagcacacattggcaatgttccagaaagcccttcagtttcttcttataatgtcccaaatcccacacaacccatgaatgcat |
100 |
Q |
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| T |
30715489 |
aaaccatctttctcacaagaagcacacattggcaatgttccagaaagcccttcagtttcttcttataatgtccgaaatcccacacaacccatgaatgcat |
30715588 |
T |
|
| Q |
101 |
cttcatacataccaatcgctcctttaccaatttttc |
136 |
Q |
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|||||||||||| ||||||||||||||||||||||| |
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| T |
30715589 |
cttcatacatacaaatcgctcctttaccaatttttc |
30715624 |
T |
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