View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1292_low_7 (Length: 520)

Name: NF1292_low_7
Description: NF1292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1292_low_7
NF1292_low_7
[»] chr5 (1 HSPs)
chr5 (92-508)||(8063926-8064342)
[»] chr2 (2 HSPs)
chr2 (92-508)||(1392432-1392848)
chr2 (92-414)||(28849196-28849519)
[»] chr3 (4 HSPs)
chr3 (96-506)||(48054848-48055250)
chr3 (124-343)||(5026447-5026663)
chr3 (124-343)||(18444424-18444640)
chr3 (124-343)||(52278129-52278345)
[»] chr4 (1 HSPs)
chr4 (124-343)||(14872280-14872496)
[»] chr8 (3 HSPs)
chr8 (124-343)||(32971861-32972077)
chr8 (124-343)||(38978107-38978323)
chr8 (124-343)||(39009204-39009420)
[»] chr6 (1 HSPs)
chr6 (124-343)||(27319948-27320164)
[»] chr1 (2 HSPs)
chr1 (28-76)||(779518-779566)
chr1 (124-193)||(7986049-7986118)
[»] scaffold0529 (1 HSPs)
scaffold0529 (124-191)||(10839-10906)
[»] scaffold0241 (1 HSPs)
scaffold0241 (124-191)||(9676-9743)
[»] scaffold1580 (1 HSPs)
scaffold1580 (124-184)||(408-468)


Alignment Details
Target: chr5 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 92 - 508
Target Start/End: Original strand, 8063926 - 8064342
Alignment:
Q  92 cagcagctgttttacccttacaagtcctcatgttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagt 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8063926 cagcagctgttttacccttacaagtcctcatgttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagt 8064025  T
Q  192 tgttgacttaggctcatcattatccttccttctaagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttct 291  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8064026 tgttggcttaggctcatcattatccttccttctaagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttct 8064125  T
Q  292 agccatagctttggtccatttgaaggcatgataaaattatcatatgtatccaagaaagtttgcttcctgtcatatgtaaccagattatacttaattaacc 391  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8064126 ggccatagctttggtccatttgaaggcatgataaaattatcatatgtatccaagaaagtttgcttcctgtcatatgtaaccagattatacttaattaacc 8064225  T
Q  392 acttaaattaagattacataaagcagaaagcatataaattaagatcacaactcacctgtaccaatgtgccacatattcatctgggttttgactattgtag 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8064226 acttaaattaagattacataaagcagaaagcatataaattaagatcacaactcacctgtaccaatgtgccacatattcatctgggttttggctattgtag 8064325  T
Q  492 tagattgctgcaacagc 508  Q
    |||||||||||||||||    
T  8064326 tagattgctgcaacagc 8064342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 405; Significance: 0; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 92 - 508
Target Start/End: Complemental strand, 1392848 - 1392432
Alignment:
Q  92 cagcagctgttttacccttacaagtcctcatgttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagt 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1392848 cagcagctgttttacccttacaagtcctcatgttatgtccaagttctttacatcttgtgcacctcatagtctcctgatttctctttcccttcttgctagt 1392749  T
Q  192 tgttgacttaggctcatcattatccttccttctaagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1392748 tgttgacttaggctcatcattatccttccttctaagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttct 1392649  T
Q  292 agccatagctttggtccatttgaaggcatgataaaattatcatatgtatccaagaaagtttgcttcctgtcatatgtaaccagattatacttaattaacc 391  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1392648 ggccatagctttggtccatttgaaggcatgataaaattatcatatgtatccaagaaagtttgcttcctgtcatatgtaaccagattatacttaattaacc 1392549  T
Q  392 acttaaattaagattacataaagcagaaagcatataaattaagatcacaactcacctgtaccaatgtgccacatattcatctgggttttgactattgtag 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1392548 acttaaattaagattacataaagcagaaagcatataaattaagatcacaactcacctgtaccaatgtgccacatattcatctgggttttggctattgtag 1392449  T
Q  492 tagattgctgcaacagc 508  Q
    |||||||||||||||||    
T  1392448 tagattgctgcaacagc 1392432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 92 - 414
Target Start/End: Original strand, 28849196 - 28849519
Alignment:
Q  92 cagcagctgttttacccttacaagtcctcatgttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagt 191  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28849196 cagcagttgttttacccttacaagtcctcatgttatgtccaagttccttacatattgtgcacctcacagtctcctgatttctctttcccttcttgctagt 28849295  T
Q  192 tgttgacttaggctcatcattatccttccttctaagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttct 291  Q
    ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||    
T  28849296 tg---acttaggctcatcattatccttcctcctaagcttctttggcctcccaggtgcccttctgactaaaggtggaagtatttgtggaaggttcacttct 28849392  T
Q  292 agccatagctttggtccatttgaaggcatgataaaattatcatatgtatccaagaaagtttgcttcctgtcatatg----taaccagattatacttaatt 387  Q
     ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| ||||| ||     |||||||||||||| ||||    
T  28849393 ggccatagctttggtccatttgaaggcatgatcaaattaccatatgtatcaaagaaagtttgcttccagtcatgtgaaaccaaccagattatactcaatt 28849492  T
Q  388 aaccacttaaattaagattacataaag 414  Q
    ||||||||||||||||| |||||||||    
T  28849493 aaccacttaaattaagaatacataaag 28849519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 96 - 506
Target Start/End: Original strand, 48054848 - 48055250
Alignment:
Q  96 agctgttttacccttacaagtcctcatgttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgtt 195  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  48054848 agctgttttacccttacaagtcctcatgttatgtccaagttccttacatcttgtgaacctcacagtgtcctgatttctctttcccttcttgctagttgtt 48054947  T
Q  196 gacttaggctcatcattatccttccttctaagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagcc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  48054948 gacttaggctcatcattatccttccttctaagcttctttggcctcccaggtgcccttctgactggaggtggcagtattggtggaaggttcacttctggcc 48055047  T
Q  296 atagctttggtccatttgaaggcatgataaaattatcatatgtatccaagaaagtttgcttcctgtcatatg----taaccagattatacttaattaacc 391  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     ||||| |||||||||||||||||    
T  48055048 atatctttcgtccatttgaaggcatgataaaattatcatatgtatccaagaaagtttgcttcctgtcatgtgaaaccaaccaaattatacttaattaacc 48055147  T
Q  392 acttaaattaagattacataaagcagaaagcatataaattaagatcacaactcacctgtaccaatgtgccacatattcatctgggttttgactattgtag 491  Q
    ||||||||||||| |||||       ||||||||||||     |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  48055148 acttaaattaagaatacat-------aaagcatataaa-----atcacaactcacctataccaatgtgccacatattcatctgggttttggctatcgtag 48055235  T
Q  492 tagattgctgcaaca 506  Q
    |||||| ||||||||    
T  48055236 tagattactgcaaca 48055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 124 - 343
Target Start/End: Complemental strand, 5026663 - 5026447
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| |||||||| ||| | ||||||||||| |||||||||||||| |||||||||||||| | |   || || |||||||| ||||||||||    
T  5026663 ttatgtccaagctctttacaccttctacacctcacagtttcctgatttctcttgcccttcttgctagtggat---tttggttcatcattctccttccttc 5026567  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    ||  |||||| |||||||| |||||||||||| |   |||||| |||||||||  |   ||||||||||||||||| ||||| ||||||||||| | |||    
T  5026566 tagccttcttaggcctccctggtgcccttctggccttaggtgggagtattggttcagcattcacttctagccatagttttgggccatttgaaggaaggat 5026467  T
Q  324 aaaattatcatatgtatcca 343  Q
     | |||||||||||||||||    
T  5026466 cagattatcatatgtatcca 5026447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 124 - 343
Target Start/End: Original strand, 18444424 - 18444640
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| |||||||| ||| ||||||||| |||  |||||||||| || ||||| ||||| | ||||   || ||||||||||| ||||||||||    
T  18444424 ttatgtccaagctctttacaccttctgcacctcaaagttacctgatttcttttgccctttttgcttgctgtt---ttgggctcatcattctccttccttc 18444520  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    |   ||| || ||||||||||||||||||||| |   |||||| |||||||||     ||| |||||| ||||||| ||||| ||||| ||||| | |||    
T  18444521 ttgcctttttaggcctcccaggtgcccttctggcaccaggtgggagtattggttctgtgttaacttctggccatagttttgggccattagaaggaaggat 18444620  T
Q  324 aaaattatcatatgtatcca 343  Q
     |||| |||||| |||||||    
T  18444621 caaatgatcataagtatcca 18444640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 124 - 343
Target Start/End: Original strand, 52278129 - 52278345
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| |||||||| ||| ||||||||| |||  |||||||||| || ||||| ||||| | ||||   || ||||||||||| ||||||||||    
T  52278129 ttatgtccaagctctttacaccttctgcacctcaaagttacctgatttcttttgccctttttgcttgctgtt---ttgggctcatcattctccttccttc 52278225  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    |   ||| || ||||||||||||||||||||| |   |||||| |||||||||     ||| |||||| ||||||| ||||| ||||| ||||| | |||    
T  52278226 ttgcctttttaggcctcccaggtgcccttctggcaccaggtgggagtattggttctgtgttaacttctggccatagttttgggccattagaaggaaggat 52278325  T
Q  324 aaaattatcatatgtatcca 343  Q
     |||| |||||| |||||||    
T  52278326 caaatgatcataagtatcca 52278345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 124 - 343
Target Start/End: Complemental strand, 14872496 - 14872280
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||||||| |||| |||||||||||||| | |   || || |||||||| ||||||||||    
T  14872496 ttatgtccaagctctttacaccttgtacacctcacagtttcctgatttttcttgcccttcttgctagtggat---tttggttcatcattctccttccttc 14872400  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    ||  |||||| |||||||| |||||||||||| |   |||||| |||||||| | |   ||||||||| ||||||| ||||| ||||| ||||| | |||    
T  14872399 tagccttcttaggcctccctggtgcccttctggccttaggtgggagtattggagcagcattcacttctggccatagttttgggccattagaaggaaggat 14872300  T
Q  324 aaaattatcatatgtatcca 343  Q
     | |||||||||||||||||    
T  14872299 cagattatcatatgtatcca 14872280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 124 - 343
Target Start/End: Complemental strand, 32972077 - 32971861
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||||||||||| ||||| |||    ||| ||| || ||||||||||| ||||||||||    
T  32972077 ttatgtccaagctctttacaacttctgcacctcacagtttcctgatttctcttgccctttttg---tttgctgatttgggctcatcattctccttccttc 32971981  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    |    ||||| ||||||||||||||||||||| |   | |||| ||||||||| |   ||| |||||| ||||||| ||||| ||||||||||| | |||    
T  32971980 ttgctttcttaggcctcccaggtgcccttctggcaccaagtgggagtattggttgtgtgttaacttctggccatagttttggaccatttgaaggaaggat 32971881  T
Q  324 aaaattatcatatgtatcca 343  Q
     ||||||||||| |||||||    
T  32971880 taaattatcataagtatcca 32971861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 343
Target Start/End: Complemental strand, 38978323 - 38978107
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| ||||||||  || | ||||||| |||  |||||||||| || ||||| ||||| | ||||   || ||||||||||| ||||||||||    
T  38978323 ttatgtccaagctctttacactttctacacctcaaagttacctgatttcttttgccctttttgcttgctgtt---ttgggctcatcattctccttccttc 38978227  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    |   ||| || ||||||||||||||||||||| |   |||||| |||||||||     ||| |||||| ||||||| ||||| ||||| ||||| | |||    
T  38978226 ttgcctttttaggcctcccaggtgcccttctggcaccaggtgggagtattggttctgtgttaacttctggccatagttttgggccattagaaggaaggat 38978127  T
Q  324 aaaattatcatatgtatcca 343  Q
     |||| |||||| |||||||    
T  38978126 caaatgatcataagtatcca 38978107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 343
Target Start/End: Complemental strand, 39009420 - 39009204
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| ||||||||  || | ||||||| |||  |||||||||| || ||||| ||||| | ||||   || ||||||||||| ||||||||||    
T  39009420 ttatgtccaagctctttacactttctacacctcaaagttacctgatttcttttgccctttttgcttgctgtt---ttgggctcatcattctccttccttc 39009324  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    |   ||| || ||||||||||||||||||||| |   |||||| |||||||||     ||| |||||| ||||||| ||||| ||||| ||||| | |||    
T  39009323 ttgcctttttaggcctcccaggtgcccttctggcaccaggtgggagtattggttctgtgttaacttctggccatagttttgggccattagaaggaaggat 39009224  T
Q  324 aaaattatcatatgtatcca 343  Q
     |||| |||||| |||||||    
T  39009223 caaatgatcataagtatcca 39009204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 124 - 343
Target Start/End: Complemental strand, 27320164 - 27319948
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttgttgacttaggctcatcattatccttccttc 223  Q
    ||||||||||| |||||||| ||| | ||||||||||| |||||||||||||| ||||||||| |||| | |   || || |||||||| ||||||||||    
T  27320164 ttatgtccaagctctttacaccttctacacctcacagtttcctgatttctcttgcccttcttgttagtggat---tttggttcatcattctccttccttc 27320068  T
Q  224 taagcttctttggcctcccaggtgcccttctgactggaggtggtagtattggtggaaggttcacttctagccatagctttggtccatttgaaggcatgat 323  Q
    ||  |||||| |||||||  |||||||||||| |   |||||| |||||||||  |   || |||||| ||||||| ||||| ||||||||||| | |||    
T  27320067 tagccttcttaggcctccttggtgcccttctggccttaggtgggagtattggttcagcatttacttctggccatagttttgggccatttgaaggaaggat 27319968  T
Q  324 aaaattatcatatgtatcca 343  Q
     | |||||||||||||||||    
T  27319967 cagattatcatatgtatcca 27319948  T

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Target: chr1 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 779566 - 779518
Alignment:
Q  28 cactttccccatccttcttctccgtcccaaccccggacttctcatcgtt 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  779566 cactttccccatccttcttctccgtcccaaccccggacttctcatcgtt 779518  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 7986118 - 7986049
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagttg 193  Q
    ||||||||||  ||||  || ||||| ||||||||||| | |||||||||||| ||||||||||||||||    
T  7986118 ttatgtccaaactcttcgcaccttgtacacctcacagttttctgatttctcttgcccttcttgctagttg 7986049  T

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Target: scaffold0529 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 10839 - 10906
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagt 191  Q
    ||||||||||| |||||||| ||||| ||||| ||| | |||||||||||||| ||||||||||||||    
T  10839 ttatgtccaagctctttacaccttgtacaccttacaatttcctgatttctcttgcccttcttgctagt 10906  T

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Target: scaffold0241 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 9676 - 9743
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttcttgctagt 191  Q
    ||||||||||| |||||||| ||||| ||||| ||| | |||||||||||||| ||||||||||||||    
T  9676 ttatgtccaagctctttacaccttgtacaccttacaatttcctgatttctcttgcccttcttgctagt 9743  T

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Target: scaffold1580 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1580
Description:

Target: scaffold1580; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 408 - 468
Alignment:
Q  124 ttatgtccaagttctttacatcttgtgcacctcacagtctcctgatttctctttcccttct 184  Q
    ||||||||||| |||||||| ||| | ||||||||||| |||||||||||||| |||||||    
T  408 ttatgtccaagctctttacaccttctacacctcacagtttcctgatttctcttgcccttct 468  T

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