View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12930_low_15 (Length: 354)
Name: NF12930_low_15
Description: NF12930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12930_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 21481752 - 21482009
Alignment:
| Q |
1 |
gaatgtaaaatatgaaaatcggtttgaaccaaccacggtttaacccgaggattcacaattcaattagttgaatgggatgagtttagtctggttttttaaa |
100 |
Q |
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| T |
21481752 |
gaatgtaaaatatgaaaatcggtttgaaccaaccacggtttaacccgaggattcacaattcaatgagttgaacgggatgagtttagtctggttttttaaa |
21481851 |
T |
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| Q |
101 |
actttggtttgatctcgattcaattacgccgggaactaggaaatccaaatccatgaaaattaagtaaaagaaaacattataagagaaggctcttacaaat |
200 |
Q |
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| T |
21481852 |
actttggtttgatctcgattcaattacgccgggaactaggaaatccaaatccatgaacattaagtaaaagaaaacattataagagaaggctcttacaaat |
21481951 |
T |
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| Q |
201 |
ttgccacacttcacatcagaatatatcactatgaaatctcctccttggagaccattag |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
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| T |
21481952 |
ttgccacacttcacatcagaatatatcactatgaaatctccttcttggagtccattag |
21482009 |
T |
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