View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12931_low_23 (Length: 424)
Name: NF12931_low_23
Description: NF12931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12931_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 11 - 406
Target Start/End: Original strand, 11024078 - 11024473
Alignment:
| Q |
11 |
gatgaaggaagaaaagaaaggaatgttgattaaaggatgggttccacaagcgttaatattggatcatccatcgataggcggattcttaacgcattgtggc |
110 |
Q |
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| T |
11024078 |
gatgaaggaagaaaagaaaggaatgttgattaaaggatgggttccacaagcgttaatattggatcatccatcgataggcggattcttaacgcattgtggc |
11024177 |
T |
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| Q |
111 |
tggaacgcgaccgtggaagcaataagttccggagtaccaatggttacaatgcccggattcggggatcaatattacaacgagaaattggtgactgaggtgc |
210 |
Q |
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| T |
11024178 |
tggaacgcgaccgtggaagcaataagttccggagtaccaatggttacaatgcccggattcggggatcaatattacaacgagaaattggtgactgaggtgc |
11024277 |
T |
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| Q |
211 |
atcgcattggcgtggaagttggcgccgcagagtggagcatgtcgccttatgatgctaagaagacagtggtgagagctgaaaggatagagaaagctgtgaa |
310 |
Q |
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| T |
11024278 |
atcgcattggcgtggaagttggcgccgcggagtggagcatgtcgccttatgatgctaagaagacagtggtgagagctgaaaggatagagaaagctgtgaa |
11024377 |
T |
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| Q |
311 |
gaaattgatggatagtaatggtgaaggtggagaaataagaaaaagggctaaagaaatgaaagagaaagcatggaaagctgttcaagaaggtggatc |
406 |
Q |
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| T |
11024378 |
gaaattgatggatagtaatggtgaaggtggagaaataagaaaaagggctaaagaaatgaaagagaaagcatggaaagctgttcaagaaggtggatc |
11024473 |
T |
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