View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12931_low_35 (Length: 326)
Name: NF12931_low_35
Description: NF12931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12931_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 16 - 307
Target Start/End: Original strand, 26716792 - 26717083
Alignment:
| Q |
16 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacttcaattggtgattgtgtgata |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26716792 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacttcaattggtgattgtgtgata |
26716891 |
T |
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| Q |
116 |
actgaaggttgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26716892 |
actgaaggttgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
26716991 |
T |
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| Q |
216 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26716992 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
26717083 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 16 - 307
Target Start/End: Original strand, 26613826 - 26614117
Alignment:
| Q |
16 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacttcaattggtgattgtgtgata |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26613826 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacttcaattggtgattgtgtgata |
26613925 |
T |
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| Q |
116 |
actgaaggttgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
215 |
Q |
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| T |
26613926 |
actgaggggtgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
26614025 |
T |
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| Q |
216 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26614026 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
26614117 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 16 - 307
Target Start/End: Original strand, 26649350 - 26649641
Alignment:
| Q |
16 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacttcaattggtgattgtgtgata |
115 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
26649350 |
atgtcaacacatgatgaaggtgttaacaggagaaacagatcacaaaaaagggttcaaatttgagccaagaagtgtgacttcaattggtgattgtgtgata |
26649449 |
T |
|
| Q |
116 |
actgaaggttgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26649450 |
actgaaggttgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
26649549 |
T |
|
| Q |
216 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26649550 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
26649641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 16 - 307
Target Start/End: Original strand, 26628801 - 26629092
Alignment:
| Q |
16 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacttcaattggtgattgtgtgata |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26628801 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacctcaattggtgattgtgtgata |
26628900 |
T |
|
| Q |
116 |
actgaaggttgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
215 |
Q |
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||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26628901 |
actgaggggtgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
26629000 |
T |
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| Q |
216 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26629001 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
26629092 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 16 - 307
Target Start/End: Original strand, 26637286 - 26637577
Alignment:
| Q |
16 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacttcaattggtgattgtgtgata |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26637286 |
atgtcaacacatgatgaaggtgttaacaggagaaacaaatcacaaaaaagggttcaaatttgagccaagaagtgtcacctcaattggtgattgtgtgata |
26637385 |
T |
|
| Q |
116 |
actgaaggttgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
215 |
Q |
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||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26637386 |
actgaggggtgggaaggacaagcttattgggttcatgtttggacattgaaaaatgggttaattacacaatttagagagtatttcaatacatggcttgttg |
26637485 |
T |
|
| Q |
216 |
tgagagatttgaggccattaaggtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
307 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26637486 |
tgagagatttgaggccattaaagtgggaagatcataagcaagataacatgacattgtggagaagtcaacctcgtgatctttatcgtaggtca |
26637577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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