View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12935_high_23 (Length: 241)
Name: NF12935_high_23
Description: NF12935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12935_high_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 449589 - 449813
Alignment:
| Q |
17 |
gattggacctgattttcaaggcaaaacccaactctggcaccctttctcattacgtaacgaacctttatcatcacatttcgatggtaatgtgcttgacttc |
116 |
Q |
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| T |
449589 |
gattggacctgattttcaaggcaaaacccaactctggcaccctttctcattacgtaacgaacctttatcatcacatttcgatggtaatgtgcttgacttc |
449688 |
T |
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| Q |
117 |
aacaaactctccgtactccatattggacacatgttctacttccatcagagcaccttgcctcaaaatagtcagactacccgtactgactgtaagtttggtg |
216 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
449689 |
aacaaactctccgtacttcatattggacacatgttctacttccatcggagcaccttgcctcaaaatagtcagaatacccgtactgactgtaagtttggtg |
449788 |
T |
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| Q |
217 |
ttgccttgtgtcaggaggaacaacc |
241 |
Q |
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|||||| |||||||||||||||||| |
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| T |
449789 |
ttgcctcgtgtcaggaggaacaacc |
449813 |
T |
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