View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12935_high_7 (Length: 451)
Name: NF12935_high_7
Description: NF12935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12935_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 18 - 436
Target Start/End: Original strand, 10976736 - 10977154
Alignment:
| Q |
18 |
aaatgagcttttttctccgatccagctttgaaatcgagctaaaactgcgtttttctagcaaaaaagcgcaggagcgcatggctggacatgcatgggcaca |
117 |
Q |
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| T |
10976736 |
aaatgagcttttttctccgatccagctttgaaatcgagctaaaactgtgtttttctagcaaaaaagcgcaggagcgcatggctggacatgcatgggcaca |
10976835 |
T |
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| Q |
118 |
tgaggtagcctttgaagttttctcatgcgcaagggcgcataggcagtaggaggacgcaacatgccacaagcttggcctcgttttgatagattatccttat |
217 |
Q |
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| T |
10976836 |
tgaggtagcctttgaagttttctcatgcgcaagggcgcataggcagtaggaggacgcaacatgccacaagcttggcctcgttttgatagattatccttat |
10976935 |
T |
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| Q |
218 |
gaatcaaataaattccatgatggatctctagaaagcaatgcacattccaataggtcgcttcaatgtgttgcagatgatgcgattgaaggagacaccatgg |
317 |
Q |
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| T |
10976936 |
gaatgaaataaattccatgatggatctctagaaagcaatgcacattccaataggtcgcttcaatgtgttgcagatgatgcgattgaaggagacaccatgg |
10977035 |
T |
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| Q |
318 |
aacaccataaccatatggagagggttgaacttgagcacactgttgcacatgaggctattcagtttgattttgaggagctcatcttcaaagagcaacaaca |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10977036 |
aacaccataaccatatggagagggttgaacttgagcacactgttgcacatgaggctattcagtttgattttgaggagctcatcttcaaagagcaacaaca |
10977135 |
T |
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| Q |
418 |
tgattaatatgctcctttg |
436 |
Q |
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||||||||||||||||||| |
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| T |
10977136 |
tgattaatatgctcctttg |
10977154 |
T |
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