View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12935_low_7 (Length: 462)
Name: NF12935_low_7
Description: NF12935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12935_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 19 - 454
Target Start/End: Original strand, 39345806 - 39346241
Alignment:
| Q |
19 |
ccttggtgcatacatgctccttcctgaatctgaaacttcatcttggatacctgtagccggtgtcgtatttgtttgtctaccatgggctttttggtttctc |
118 |
Q |
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| T |
39345806 |
ccttggtgcatacatgctccttcctgaatctgaaacttcatcttggatacctgtagccggtgtcgtatttgtttgtctaccatgggctttttggtttctc |
39345905 |
T |
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| Q |
119 |
acatgtttatatagaattttctcaaggtgttttggattgagagttggagcaggaatcgctaacggtggaggcggaggtggaggaaattggggtggttcaa |
218 |
Q |
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| T |
39345906 |
acatgtttatatagaattttctcaaggtgttttggattgagagttggagcaggaatcgctaacggtggaggcggaggtggaggaaattggggtggttcaa |
39346005 |
T |
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| Q |
219 |
ctacacctaggaatggagatgttgaggttgcaactcaatcaccaaaaggtgttggtgctgctcaattgaatagggtatcttctgttgcctcacatgaaag |
318 |
Q |
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| T |
39346006 |
ctacacctaggaatggagatgttgaggttgcaactcaatcaccaaaaggtgttggtgctgctcaattgaatagggtatcttctgttgcctcacatgaaag |
39346105 |
T |
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| Q |
319 |
tgaattgccattggcaaaatcaatgagatcgtgacatgacatgattttcgttgaaattttgttccttcttgttgatgctctcattttttggggtgcccta |
418 |
Q |
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| T |
39346106 |
tgaattgccattggcaaaatcaatgagatcgtgacatgacatgattttcattgaaattttgttccttcttgttgatgctctcattttttggggtgcccta |
39346205 |
T |
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| Q |
419 |
tgtgatacataataatcatctaattaattgatgatg |
454 |
Q |
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| T |
39346206 |
tgtgatacataataatcatctaattaattggtgatg |
39346241 |
T |
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