View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12936_high_21 (Length: 238)
Name: NF12936_high_21
Description: NF12936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12936_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 48412088 - 48412310
Alignment:
| Q |
1 |
cacttttgggactctcgtttgtaaaagaagaatgagaatccttcattttactatctcccacattcaacatagtaagtgctttctggtaggttgaaattat |
100 |
Q |
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| T |
48412088 |
cacttttgggactctcgtttgtaaaagaagaatgagaatccttcattttaccatctcccacattcaacatagtaagtgctttctggtaggttgaaattat |
48412187 |
T |
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| Q |
101 |
tttgtcaatcaagaattcattggtttcattggatgataaaattatatggttacttagctgatttgctagctcctttccatggactaattcattgattata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48412188 |
cttgtcaatcaagaattcattggtttcattggatgataaaattatatggttacttagctgatttgctagctcctttccatggactaattcattgattata |
48412287 |
T |
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| Q |
201 |
ctaccacgttttctcttggtagt |
223 |
Q |
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||| ||||||||||||||||||| |
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| T |
48412288 |
ctatcacgttttctcttggtagt |
48412310 |
T |
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