View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12936_low_23 (Length: 242)
Name: NF12936_low_23
Description: NF12936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12936_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 16961705 - 16961935
Alignment:
| Q |
1 |
cagaaatctgtggtgctgcttaaggtttttagtgatgaagggtagccaagaatttcttgaagtttgtaaagtgtttgagactgagaaaattgtaactgtt |
100 |
Q |
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| T |
16961705 |
cagaaatctgtggtgctgcttaatgtttttagtgatgaagggtagccaagaatttcttgaagtttgtaaagtgtttgagactgagaaaattgtaactgtt |
16961804 |
T |
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| Q |
101 |
gtgagagatgaatggtggaaaggaagaagatgaagaggagtaggtgttgtgaatgtggaaatggttttgccattatttcttcaagtggagaaaaaagata |
200 |
Q |
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| T |
16961805 |
gtgagagatgaatggtggaaaggaagaagatgaagaggagtaggtgttgtgaatgtggaaatggttttgccattatttcttcaagtggagaaaaaagata |
16961904 |
T |
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| Q |
201 |
gagttggataaataagtacactacacaggtt |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
16961905 |
gagttggataaataagtacactacacaggtt |
16961935 |
T |
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