View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12940_low_9 (Length: 232)

Name: NF12940_low_9
Description: NF12940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12940_low_9
NF12940_low_9
[»] chr6 (26 HSPs)
chr6 (16-207)||(29335590-29335781)
chr6 (156-207)||(2105900-2105951)
chr6 (162-221)||(24623318-24623377)
chr6 (162-220)||(21936035-21936093)
chr6 (162-216)||(23635720-23635774)
chr6 (156-221)||(9111042-9111107)
chr6 (156-221)||(13496111-13496176)
chr6 (162-207)||(20720796-20720841)
chr6 (162-210)||(32193871-32193919)
chr6 (162-221)||(655750-655809)
chr6 (156-207)||(8138473-8138524)
chr6 (156-207)||(9392683-9392734)
chr6 (156-219)||(12336329-12336392)
chr6 (156-219)||(21847189-21847252)
chr6 (162-220)||(1918460-1918518)
chr6 (162-216)||(12904323-12904377)
chr6 (153-207)||(33938694-33938748)
chr6 (162-219)||(4450263-4450320)
chr6 (167-216)||(10053256-10053305)
chr6 (162-207)||(12329277-12329322)
chr6 (154-207)||(28951392-28951445)
chr6 (164-220)||(6283939-6283995)
chr6 (156-220)||(9665305-9665369)
chr6 (171-207)||(17420733-17420769)
chr6 (185-221)||(25165301-25165337)
chr6 (156-207)||(34828301-34828353)
[»] chr8 (29 HSPs)
chr8 (162-220)||(574385-574443)
chr8 (162-221)||(20469312-20469371)
chr8 (153-221)||(8717476-8717544)
chr8 (154-221)||(29652211-29652278)
chr8 (162-220)||(26885640-26885698)
chr8 (156-205)||(44293570-44293619)
chr8 (156-216)||(6447184-6447244)
chr8 (167-207)||(24687785-24687825)
chr8 (156-216)||(27718900-27718960)
chr8 (162-221)||(6248302-6248361)
chr8 (153-208)||(10320488-10320543)
chr8 (185-232)||(15188923-15188970)
chr8 (162-201)||(37750020-37750059)
chr8 (162-221)||(42367730-42367789)
chr8 (167-222)||(44019555-44019610)
chr8 (162-220)||(14279573-14279631)
chr8 (156-221)||(6008659-6008723)
chr8 (167-216)||(6038281-6038330)
chr8 (162-207)||(6235566-6235611)
chr8 (156-201)||(13286126-13286171)
chr8 (164-221)||(19260580-19260637)
chr8 (154-207)||(26991772-26991825)
chr8 (156-201)||(30417631-30417676)
chr8 (162-215)||(38594437-38594490)
chr8 (162-207)||(41625195-41625240)
chr8 (162-207)||(42932243-42932288)
chr8 (163-207)||(1230676-1230720)
chr8 (185-221)||(11670775-11670811)
chr8 (171-207)||(43073451-43073487)
[»] chr3 (30 HSPs)
chr3 (159-207)||(39100099-39100147)
chr3 (162-207)||(49088753-49088798)
chr3 (156-219)||(7827503-7827566)
chr3 (156-219)||(21331420-21331483)
chr3 (151-216)||(36690002-36690067)
chr3 (156-204)||(32632316-32632364)
chr3 (156-220)||(33633320-33633384)
chr3 (156-216)||(43345013-43345073)
chr3 (164-204)||(53852738-53852778)
chr3 (156-219)||(7824802-7824865)
chr3 (156-207)||(7829891-7829942)
chr3 (162-221)||(7859493-7859552)
chr3 (156-207)||(33223863-33223914)
chr3 (149-207)||(5428451-5428509)
chr3 (158-204)||(25485486-25485532)
chr3 (159-221)||(52119374-52119436)
chr3 (156-198)||(53429150-53429192)
chr3 (167-216)||(977947-977996)
chr3 (156-221)||(28244105-28244170)
chr3 (156-221)||(28965778-28965842)
chr3 (162-207)||(29791777-29791822)
chr3 (162-207)||(42269299-42269344)
chr3 (162-207)||(43490432-43490477)
chr3 (156-221)||(44579631-44579696)
chr3 (162-207)||(50570204-50570249)
chr3 (168-221)||(52456488-52456541)
chr3 (167-207)||(25289328-25289368)
chr3 (185-221)||(26610494-26610530)
chr3 (167-219)||(45254237-45254289)
chr3 (185-221)||(46226026-46226062)
[»] scaffold0011 (1 HSPs)
scaffold0011 (159-221)||(189973-190035)
[»] chr1 (31 HSPs)
chr1 (156-221)||(44243868-44243933)
chr1 (162-219)||(45701329-45701386)
chr1 (155-220)||(51046136-51046201)
chr1 (156-216)||(3528475-3528535)
chr1 (162-221)||(32950762-32950821)
chr1 (155-221)||(2613716-2613782)
chr1 (162-212)||(3393578-3393628)
chr1 (167-221)||(21015968-21016022)
chr1 (162-219)||(9413799-9413856)
chr1 (156-221)||(29233975-29234040)
chr1 (156-213)||(48681942-48681999)
chr1 (156-221)||(52441512-52441577)
chr1 (156-207)||(3693811-3693862)
chr1 (162-205)||(8153136-8153179)
chr1 (162-221)||(34521191-34521250)
chr1 (156-207)||(36371055-36371106)
chr1 (162-221)||(43611425-43611484)
chr1 (162-200)||(14388-14426)
chr1 (167-221)||(26329123-26329177)
chr1 (156-206)||(44641522-44641572)
chr1 (156-221)||(13590105-13590170)
chr1 (162-207)||(17917153-17917198)
chr1 (162-207)||(24124845-24124890)
chr1 (156-201)||(24695554-24695599)
chr1 (168-221)||(28712537-28712589)
chr1 (156-221)||(42045373-42045438)
chr1 (167-200)||(50372383-50372416)
chr1 (151-215)||(422537-422601)
chr1 (185-221)||(9639818-9639854)
chr1 (184-216)||(23045214-23045246)
chr1 (155-207)||(51127905-51127957)
[»] chr5 (20 HSPs)
chr5 (153-221)||(16193099-16193167)
chr5 (156-207)||(12909181-12909232)
chr5 (162-221)||(18489077-18489136)
chr5 (162-221)||(26409254-26409313)
chr5 (162-219)||(28604421-28604478)
chr5 (156-221)||(37932325-37932390)
chr5 (162-207)||(42659578-42659623)
chr5 (169-221)||(26655472-26655524)
chr5 (169-221)||(26927057-26927109)
chr5 (170-221)||(17239382-17239433)
chr5 (162-216)||(27903114-27903168)
chr5 (153-207)||(29962350-29962404)
chr5 (153-207)||(30012394-30012448)
chr5 (180-218)||(38370769-38370807)
chr5 (168-221)||(1642341-1642394)
chr5 (156-221)||(6624771-6624836)
chr5 (164-221)||(13409553-13409610)
chr5 (156-201)||(19248474-19248519)
chr5 (167-207)||(31602840-31602880)
chr5 (156-216)||(37054275-37054335)
[»] chr4 (40 HSPs)
chr4 (162-222)||(6459924-6459984)
chr4 (162-221)||(3936628-3936687)
chr4 (167-221)||(7190449-7190503)
chr4 (164-221)||(2649734-2649791)
chr4 (156-221)||(12671749-12671814)
chr4 (162-207)||(18903773-18903818)
chr4 (156-221)||(43722760-43722825)
chr4 (172-216)||(50380842-50380886)
chr4 (162-206)||(56298140-56298184)
chr4 (162-221)||(897426-897485)
chr4 (156-207)||(21935007-21935058)
chr4 (156-207)||(22164284-22164335)
chr4 (162-221)||(28435249-28435308)
chr4 (171-218)||(37422201-37422248)
chr4 (175-221)||(17948137-17948183)
chr4 (163-221)||(22040652-22040710)
chr4 (170-220)||(27740749-27740799)
chr4 (162-208)||(32923244-32923290)
chr4 (162-220)||(36071145-36071203)
chr4 (155-205)||(40284112-40284162)
chr4 (171-221)||(51436607-51436657)
chr4 (162-216)||(54500570-54500624)
chr4 (162-207)||(10564480-10564525)
chr4 (156-221)||(11949764-11949829)
chr4 (162-207)||(14079253-14079297)
chr4 (156-221)||(14577508-14577573)
chr4 (162-207)||(21266897-21266942)
chr4 (156-221)||(24664992-24665057)
chr4 (156-221)||(35287508-35287573)
chr4 (156-221)||(36478986-36479051)
chr4 (156-201)||(42198597-42198642)
chr4 (156-221)||(43374273-43374338)
chr4 (162-207)||(47266153-47266198)
chr4 (156-221)||(54857616-54857681)
chr4 (167-207)||(10204846-10204886)
chr4 (155-207)||(16304113-16304165)
chr4 (168-216)||(22411771-22411819)
chr4 (185-221)||(37254972-37255008)
chr4 (162-221)||(38352763-38352823)
chr4 (185-221)||(42861769-42861805)
[»] chr2 (35 HSPs)
chr2 (153-205)||(20517014-20517066)
chr2 (156-220)||(33063981-33064045)
chr2 (156-219)||(16221349-16221412)
chr2 (155-221)||(19967412-19967478)
chr2 (171-221)||(41853375-41853425)
chr2 (162-207)||(32957558-32957603)
chr2 (155-207)||(3196554-3196606)
chr2 (156-208)||(24548112-24548164)
chr2 (162-222)||(44488010-44488070)
chr2 (167-222)||(6765616-6765671)
chr2 (156-219)||(7029394-7029457)
chr2 (162-221)||(12124546-12124605)
chr2 (156-207)||(18782555-18782606)
chr2 (162-221)||(25186243-25186302)
chr2 (164-207)||(41672299-41672342)
chr2 (162-220)||(4238760-4238818)
chr2 (167-221)||(12124690-12124744)
chr2 (156-218)||(16877119-16877181)
chr2 (156-218)||(16989250-16989312)
chr2 (167-221)||(23756718-23756772)
chr2 (167-221)||(25274830-25274884)
chr2 (167-201)||(37984361-37984395)
chr2 (167-208)||(6228640-6228681)
chr2 (156-221)||(7201502-7201567)
chr2 (155-216)||(7537104-7537165)
chr2 (156-205)||(17736788-17736837)
chr2 (171-216)||(19159951-19159996)
chr2 (156-221)||(19212953-19213018)
chr2 (162-207)||(29734692-29734737)
chr2 (162-207)||(41682402-41682447)
chr2 (156-212)||(3197089-3197145)
chr2 (156-200)||(9517031-9517075)
chr2 (162-221)||(19976154-19976214)
chr2 (157-201)||(34464430-34464474)
chr2 (162-206)||(37119274-37119318)
[»] chr7 (25 HSPs)
chr7 (162-216)||(1261176-1261230)
chr7 (162-220)||(33610927-33610985)
chr7 (169-221)||(24099236-24099288)
chr7 (153-205)||(31885962-31886014)
chr7 (162-221)||(36980995-36981054)
chr7 (162-221)||(43539105-43539164)
chr7 (167-221)||(9522918-9522972)
chr7 (171-221)||(27263351-27263401)
chr7 (171-221)||(27270245-27270295)
chr7 (167-221)||(38553824-38553878)
chr7 (157-207)||(44558789-44558839)
chr7 (156-221)||(3231052-3231117)
chr7 (164-221)||(7908596-7908653)
chr7 (156-201)||(8683065-8683110)
chr7 (156-221)||(10244722-10244787)
chr7 (166-207)||(19684227-19684268)
chr7 (156-205)||(22267576-22267625)
chr7 (162-207)||(25251511-25251556)
chr7 (156-201)||(29734811-29734856)
chr7 (156-221)||(36341066-36341131)
chr7 (162-207)||(48069852-48069897)
chr7 (162-222)||(8879747-8879807)
chr7 (164-204)||(20205825-20205865)
chr7 (157-201)||(25246767-25246811)
chr7 (156-207)||(34807213-34807265)
[»] scaffold0122 (1 HSPs)
scaffold0122 (162-208)||(14200-14246)
[»] scaffold0350 (1 HSPs)
scaffold0350 (167-216)||(1254-1303)
[»] scaffold0118 (1 HSPs)
scaffold0118 (166-219)||(44423-44476)
[»] scaffold0057 (1 HSPs)
scaffold0057 (162-207)||(35179-35224)
[»] scaffold0012 (1 HSPs)
scaffold0012 (156-221)||(118814-118879)
[»] scaffold0005 (1 HSPs)
scaffold0005 (156-221)||(239802-239867)
[»] scaffold0312 (1 HSPs)
scaffold0312 (151-215)||(7971-8035)


Alignment Details
Target: chr6 (Bit Score: 131; Significance: 4e-68; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 207
Target Start/End: Complemental strand, 29335781 - 29335590
Alignment:
Q  16 atatacgattgcataatgatatgattgatgacattcttgaaacttttttc--acttcaattatatagagagaaaatattgatatattgcttgttttcatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29335781 atatacgattgcataatgatatgattgatgacattcttgaaacttttttctcacttcaattatatagagagaaaatattgatatattgcttgttttcatg 29335682  T
Q  114 tcccacaatgactcacctcagtcaatcgaccctaaagcaatatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||| | | ||||| ||||||||||||||||||||| ||||| |||| ||| |||||||  |||||||||||||||||||||| |||||    
T  29335681 tcccacaat-agt-acctctgtcaatcgaccctaaagcaatgtcctcgtgagcttaactcagttagtataaacaatgcataatatatgcaaggt 29335590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 2105900 - 2105951
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| |||||||||||| |||| || |||||||||||||||||||||||||    
T  2105900 tcctcgtgagtttagctcggttggtaaaaacaatgcataatatatgtaaggt 2105951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 24623377 - 24623318
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||| ||| |||| ||||    
T  24623377 tgagtttagctcagttgatatggacaatgcataatatatgtaaggttcggggttcaaacc 24623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 21936093 - 21936035
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||||||||||||||| ||  |||||| ||||||||||| ||||| ||||||||||||    
T  21936093 tgagtttagctcagttggtaagaacaattcataatatatgcaaggtccggagttcgaac 21936035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 23635774 - 23635720
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||||| ||||||||    
T  23635774 tgagcttatctcagttgatatatacaatgcataatatatgtaaggttcggagttc 23635720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 9111042 - 9111107
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||| ||||||| ||| |||||||||||||||||| ||||| ||| |||||||||    
T  9111042 tcctcgtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaacc 9111107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 13496111 - 13496176
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| ||| |||||||| ||| |||||||||||||||||| ||||| |||||||| ||||    
T  13496111 tcctcgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccggagttcaaacc 13496176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 20720841 - 20720796
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||    
T  20720841 tgagcttagctcagttgttatggacaatgcataatatatgtaaggt 20720796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 32193919 - 32193871
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacg 210  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  32193919 tgagtttagctcagttggtaagaacaatgcataatatatgcaaggtacg 32193871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 655809 - 655750
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||||||||||| |||  ||||||||||||||||| ||||| ||| |||||||||    
T  655809 tgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcgaacc 655750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 8138524 - 8138473
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| ||| ||||||||||||| ||  ||||||||||||||||||||||||    
T  8138524 tcctcgtgaatttagctcagttgataagaacaatgcataatatatgtaaggt 8138473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 9392734 - 9392683
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| |||| |||||||||||||||| || ||||||||||||||| |||||    
T  9392734 tcctcgtgagcttagctcagttgttatgaaaaatgcataatatatgcaaggt 9392683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 12336392 - 12336329
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||| |||||||| |||||||  |||  |||||||||||||||| |||||||||| |||||||    
T  12336392 tcctcgtgagtttaactcagttaatatggacaatgcataatatatataaggtacggggttcgaa 12336329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 21847189 - 21847252
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    |||||||||| |||||||||||| ||   ||||| ||||||||||| ||||||||| |||||||    
T  21847189 tcctcttgagcttagctcagttggtagggacaatacataatatatgcaaggtacggggttcgaa 21847252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 1918518 - 1918460
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    |||||||| |||||||| |||| ||||||||||||||||| ||||| ||  ||||||||    
T  1918518 tgagtttaactcagttggtatagacaatgcataatatatgcaaggtccgaggttcgaac 1918460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 12904377 - 12904323
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||| ||| |||||||| ||| |||||||||||||||||| ||||| ||||||||    
T  12904377 tgagcttacctcagttgatatgaacaatgcataatatatgcaaggttcggagttc 12904323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 33938748 - 33938694
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| ||| |||| |||||||||||| ||| |||||||||||||||||| |||||    
T  33938748 atattctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 33938694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 4450263 - 4450320
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    |||| |||||||||||| || | ||||||||||||||||| ||||| ||| |||||||    
T  4450263 tgagcttagctcagttgataaagacaatgcataatatatgcaaggtccggggttcgaa 4450320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 10053256 - 10053305
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||||||||| |||  |||||||||||||||||||| || ||||||||    
T  10053256 ttagctcagttggtatggacaatgcataatatatgtaaagttcggagttc 10053305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 12329277 - 12329322
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||||||||||| |||||| ||||| |||||||||||    
T  12329277 tgagcttagctcagttgttatgaacaatacataaaatatgtaaggt 12329322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 28951392 - 28951445
Alignment:
Q  154 tatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||| |||| ||| |||||||| ||| |||||||||||||||||| |||||    
T  28951392 tatcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggt 28951445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 6283939 - 6283995
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||||||||| ||| ||  ||||||||||||||||||||| |  ||||||||||||    
T  6283939 agtttagctcaattgataagaacaatgcataatatatgtaaagctcggagttcgaac 6283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 9665305 - 9665369
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||| |||||||| |||| ||| ||| ||||||  |||||||||||||||| ||| ||||||||    
T  9665305 tcctcgtgagtttaactcaattggtatgaacaatatataatatatgtaaggtccggggttcgaac 9665369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 17420769 - 17420733
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||| |||||||||| |||||||||||||||||    
T  17420769 ctcagttggtataaacaatacataatatatgtaaggt 17420733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 25165301 - 25165337
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  25165301 acaatgcataatatatgtaaggtccggcgttcgaacc 25165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 34828301 - 34828353
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataat-atatgtaaggt 207  Q
    ||||| ||||||||||||||||| |||  |||||||||||| |||||||||||    
T  34828301 tcctcgtgagtttagctcagttggtatggacaatgcataataatatgtaaggt 34828353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 574385 - 574443
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  574385 tgagcttagctcagttgatatagacaatgcataatatatgtaaggtccggagttcgaac 574443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 20469371 - 20469312
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  20469371 tgagcttagatcagttggtataaacaatgcataatatatgcaaggttcggagttcgaacc 20469312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 8717544 - 8717476
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||| ||||||||||||||||| |||  ||||||||||||||||| ||||| ||| |||| ||||    
T  8717544 atatcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaacc 8717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 29652211 - 29652278
Alignment:
Q  154 tatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||| ||||||||||||||||| ||  |||||||||||||||||| ||||| | |||||| ||||    
T  29652211 tatcctcatgagtttagctcagttgataagaacaatgcataatatatgcaaggtccagagttcaaacc 29652278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 26885698 - 26885640
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||| | ||| ||||||||    
T  26885698 tgagtttagctcagttggtatgaacaatgcataaaatatgtaagatccggggttcgaac 26885640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 44293570 - 44293619
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaag 205  Q
    ||||| |||| |||||||||||| |||| |||||||||||||||||||||    
T  44293570 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgtaag 44293619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 6447184 - 6447244
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||| |||||||| |||||||| |||  ||||||||||||||||| ||||| ||||||||    
T  6447184 tcctcgtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggagttc 6447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 24687785 - 24687825
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  24687785 ttagctcaattgatataaacaatgcataatatatgtaaggt 24687825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 27718960 - 27718900
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||| |||| |||||||||||| |||  ||||||||||||||||| ||||| ||||||||    
T  27718960 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttc 27718900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 6248302 - 6248361
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||| |||||||| |||| || || ||||||||||| ||||| |||||||||||||    
T  6248302 tgagtttaactcagttgatatatacgatacataatatatgcaaggtccggagttcgaacc 6248361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 10320488 - 10320543
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggta 208  Q
    |||||| | ||||||||||||||||| ||  || ||||||||||||||||||||||    
T  10320488 atatccccgtgagtttagctcagttgataagaataatgcataatatatgtaaggta 10320543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 15188923 - 15188970
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaaccattttcttccg 232  Q
    ||||||||||||||||||||| |  || ||||||||||||||||||||    
T  15188923 acaatgcataatatatgtaagatctggggttcgaaccattttcttccg 15188970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 37750059 - 37750020
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  37750059 tgagtttagctcagttgatatgaacaatgcataatatatg 37750020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 42367730 - 42367789
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||||||||||| ||  |||||||||||||||||| || || |||||||||||||    
T  42367730 tgagcttagctcagttgataagaacaatgcataatatatgaaaagtccggagttcgaacc 42367789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 44019555 - 44019610
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacca 222  Q
    |||||||||||| ||  |||||||||||||||||| ||||| || |||||||||||    
T  44019555 ttagctcagttggtaagaacaatgcataatatatgcaaggtccgaagttcgaacca 44019610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 14279631 - 14279573
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    |||||||| |||||||| |||| ||||||||||| ||||| ||||| ||| ||||||||    
T  14279631 tgagtttaactcagttggtatagacaatgcataaaatatgcaaggttcggggttcgaac 14279573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 6008659 - 6008723
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||| |||  |||||||||||| |||| ||| | |||||||||||||    
T  6008659 tcctcatgagtttagctcagttggtattgacaatgcataat-tatgcaagatccggagttcgaacc 6008723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 6038330 - 6038281
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||||||||| |||  |||||||||||||||||||||||  |||||||    
T  6038330 ttagctcagttgatatggacaatgcataatatatgtaaggtctggagttc 6038281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 6235611 - 6235566
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||| |||  || ||||||||||||||||||||    
T  6235611 tgagtttagctcagttggtatggacgatgcataatatatgtaaggt 6235566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 13286126 - 13286171
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    ||||| |||| |||||||||||| |||| |||||||||||||||||    
T  13286126 tcctcgtgagcttagctcagttggtatagacaatgcataatatatg 13286171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 19260637 - 19260580
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||| ||||| |||  ||||||||||||||||||||||| ||| |||| ||||    
T  19260637 agtttagcttagttgatatgtacaatgcataatatatgtaaggtccggggttcaaacc 19260580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 26991825 - 26991772
Alignment:
Q  154 tatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||| ||||||| ||||||||| |||  ||||||||||||||||| |||||    
T  26991825 tatcctcatgagtttggctcagttgatatggacaatgcataatatatgcaaggt 26991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 30417676 - 30417631
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    |||||||||| |||||||||||| |||| |||||| ||||||||||    
T  30417676 tcctcttgagcttagctcagttggtatagacaatgtataatatatg 30417631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 38594490 - 38594437
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagtt 215  Q
    |||||||||||||  || ||  |||||||||||||||||||||||| |||||||    
T  38594490 tgagtttagctcaactgataagaacaatgcataatatatgtaaggtccggagtt 38594437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 41625195 - 41625240
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||||||| ||| || |||||||||||||||||||||    
T  41625195 tgagcttagctcagttggtatgaataatgcataatatatgtaaggt 41625240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 42932288 - 42932243
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||| ||| ||| ||||||||||| ||||||||||||||||    
T  42932288 tgagtttagttcacttggtataaacaatgtataatatatgtaaggt 42932243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 1230720 - 1230676
Alignment:
Q  163 gagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||| |||||||| ||  ||||||||||||||||||||||||    
T  1230720 gagtttaactcagttggtaggaacaatgcataatatatgtaaggt 1230676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 11670775 - 11670811
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  11670775 acaatacataatatatgtaaggtccggagttcgaacc 11670811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 43073487 - 43073451
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||| || |||||||||||||||||||||||||    
T  43073487 ctcagttggtaaaaacaatgcataatatatgtaaggt 43073451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 39100147 - 39100099
Alignment:
Q  159 tcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  39100147 tcttaagtttagctcagttgttataaacaatgcataatatatgcaaggt 39100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 49088753 - 49088798
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  49088753 tgagtttagctcagttgatataaacaatgcataaaatatgtaaggt 49088798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 7827503 - 7827566
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||| |||||||| |||||||| |||  |||||||||||||||||||||||  ||||||||||    
T  7827503 tcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctggagttcgaa 7827566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 21331483 - 21331420
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||| |||| ||||||||||||||||  ||||||||||||||||| ||||| ||| |||||||    
T  21331483 tcctcgtgagcttagctcagttgttatggacaatgcataatatatgcaaggttcggggttcgaa 21331420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 36690002 - 36690067
Alignment:
Q  151 caatatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||||||| |||||||| ||  |||| ||  |||||||||||||||||||||||| ||||||||    
T  36690002 caatatcctcatgagtttaactatgttggtaggaacaatgcataatatatgtaaggttcggagttc 36690067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 32632316 - 32632364
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaa 204  Q
    ||||| |||| || ||||||||| |||||||||||||||||||||||||    
T  32632316 tcctcgtgagctttgctcagttggtataaacaatgcataatatatgtaa 32632364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 33633384 - 33633320
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||| |||| ||| |||||||  |||| ||||||||||||||||||||| | ||||||||||||    
T  33633384 tcctcgtgagcttaactcagttagtatagacaatgcataatatatgtaagatccggagttcgaac 33633320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 43345073 - 43345013
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||| ||||||||||||||||| ||| |||||| ||||||||||| ||||| | ||||||    
T  43345073 tcctcgtgagtttagctcagttggtatgaacaatacataatatatgcaaggtccagagttc 43345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 53852738 - 53852778
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaa 204  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  53852738 agtttagctcagttggcataaacaatgcataatatatgtaa 53852778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 7824802 - 7824865
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||| |||||||| |||||||| |||| ||||| ||||||||||| |||||  ||||||||||    
T  7824802 tcctcgtgagtttaactcagttgatatagacaatacataatatatgcaaggtctggagttcgaa 7824865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 7829891 - 7829942
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| |||||||| |||||||| |||  |||||||||||||||||||||||    
T  7829891 tcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggt 7829942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 7859552 - 7859493
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||  ||||||| |||| | ||||||||||||||||||||| ||| |||||||||    
T  7859552 tgagtttacatcagttggtatagataatgcataatatatgtaaggttcggggttcgaacc 7859493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 33223863 - 33223914
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| |||| |||||||||||| || ||||||||||||||||||| |||||    
T  33223863 tcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaaggt 33223914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5428509 - 5428451
Alignment:
Q  149 agcaatatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| ||||||  ||||||||||||| ||| || ||||||||||||||||||| |||||    
T  5428509 agcattatccttgtgagtttagctcaattgataaaaacaatgcataatatatgcaaggt 5428451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 25485532 - 25485486
Alignment:
Q  158 ctcttgagtttagctcagttgttataaacaatgcataatatatgtaa 204  Q
    |||||||||||| |||| ||| |||| ||||||||||||||||||||    
T  25485532 ctcttgagtttaactcaattgatatagacaatgcataatatatgtaa 25485486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 52119374 - 52119436
Alignment:
Q  159 tcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||| |||||||||||| ||   ||||||||||||||||| ||||| ||| |||||||||    
T  52119374 tcttgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcgaacc 52119436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 53429150 - 53429192
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatat 198  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||    
T  53429150 tcctcgtgagtttagctcagttggtatagacaatgcataatat 53429192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 977996 - 977947
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||||||||| |||  ||||||||||||||||| ||||| ||||||||    
T  977996 ttagctcagttggtatggacaatgcataatatatgcaaggtccggagttc 977947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 28244170 - 28244105
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| ||| |||||||| ||| |||||||||||| ||||| ||||| ||| |||||||||    
T  28244170 tcctcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggggttcgaacc 28244105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 28965842 - 28965778
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||| || ||||||||| || |||||||||||||||||||||||| ||| |||| ||||    
T  28965842 tcctcgtgagtataactcagttgt-atgaacaatgcataatatatgtaaggttcggggttcaaacc 28965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 29791777 - 29791822
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||| |||||||| || ||||||| |||||||||||||||||    
T  29791777 tgagtttaactcagttgatagaaacaatacataatatatgtaaggt 29791822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 42269299 - 42269344
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||  |||  |||||||||||||||||||||||    
T  42269299 tgagtttagctcagttagtatggacaatgcataatatatgtaaggt 42269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 43490477 - 43490432
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||||||| ||| |||||||||||||||||| |||||    
T  43490477 tgagcttagctcagttggtatgaacaatgcataatatatgcaaggt 43490432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 44579631 - 44579696
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||  ||||||||||| ||||| ||||| ||| |||||||||    
T  44579631 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcgaacc 44579696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 50570249 - 50570204
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||||||| |||| ||||||||||||||||| |||||    
T  50570249 tgagcttagctcagttggtatagacaatgcataatatatgcaaggt 50570204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 52456488 - 52456541
Alignment:
Q  168 tagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||||||  | ||||||||| ||||||||||| ||| |||||||||    
T  52456488 tagctcagttgttatggataatgcataaaatatgtaaggtccggggttcgaacc 52456541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 25289368 - 25289328
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||||||| || |||||||| ||||||||||||||||    
T  25289368 ttagctcagttggtaaaaacaatgtataatatatgtaaggt 25289328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 26610530 - 26610494
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||||||||||||||| || |||||||||    
T  26610530 acaatgcataatatatgtaaggtatggggttcgaacc 26610494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 45254237 - 45254289
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    |||||||||||| ||   |||||||||||||||||||||||  ||||||||||    
T  45254237 ttagctcagttggtaaggacaatgcataatatatgtaaggtttggagttcgaa 45254289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 46226062 - 46226026
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  46226062 acaatgcataatatatgcaaggtccggagttcgaacc 46226026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 190035 - 189973
Alignment:
Q  159 tcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||| ||| |||| ||||    
T  190035 tcttgagtttagctcagttgttgaagacaatgcataatatatgtaaggttcggggttcaaacc 189973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 44243868 - 44243933
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||| ||  |||||||||||||||||||||||| | |||||| ||||    
T  44243868 tcctcgtgagtttagctcagttggtaggaacaatgcataatatatgtaaggtccagagttcaaacc 44243933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 45701329 - 45701386
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||||  ||||||||||    
T  45701329 tgagtttagctcagttggtatgaacaatgcataaaatatgtaaggtctggagttcgaa 45701386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 51046136 - 51046201
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    |||||| |||||||| |||||||| ||| |||||| ||||| ||||||||||| ||||||||||||    
T  51046136 atcctcgtgagtttaactcagttggtatgaacaatacataaaatatgtaaggttcggagttcgaac 51046201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 3528535 - 3528475
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||| ||||||||||||||||| || |||||||| |||||||||||||||| ||| ||||    
T  3528535 tcctcgtgagtttagctcagttgatagaaacaatgtataatatatgtaaggtccggtgttc 3528475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 32950821 - 32950762
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| ||| |||||||| |||||||||||||||||||||| ||||| |||||||| ||||    
T  32950821 tgagcttaactcagttggtataaacaatgcataatatatgcaaggtccggagttcaaacc 32950762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 2613716 - 2613782
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||| |||| |||||||||||| |||  ||||||||||| ||||||||||| ||| |||||||||    
T  2613716 atcctcgtgagcttagctcagttggtatggacaatgcataaaatatgtaaggttcggggttcgaacc 2613782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 3393628 - 3393578
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacgga 212  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  3393628 tgagtttagctcagttgatatgaacaatgcataatatatgcaaggttcgga 3393578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 21015968 - 21016022
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| ||  |||||||||||||||||||||||| ||| |||||||||    
T  21015968 ttagctcagttggtaagaacaatgcataatatatgtaaggttcggggttcgaacc 21016022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 9413799 - 9413856
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||||| ||| |||||||    
T  9413799 tgagtttagttcagttggtaagaacaatgcataatatatgtaaggttcggggttcgaa 9413856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 29234040 - 29233975
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||| |||| ||||||||||| ||||| |||||  || |||||||||    
T  29234040 tcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaaggtctggggttcgaacc 29233975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 48681999 - 48681942
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggag 213  Q
    ||||| |||| |||||||||||| ||| |||||||||||||||||| ||||| |||||    
T  48681999 tcctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggag 48681942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 52441577 - 52441512
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||| ||||||||||||||||| ||||| ||| ||| |||||    
T  52441577 tcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaggtccggcgtttgaacc 52441512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 3693862 - 3693811
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| |||| |||||||||||| |||| |||| ||||||||||||||||||    
T  3693862 tcctcgtgagcttagctcagttgatatagacaaagcataatatatgtaaggt 3693811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 8153136 - 8153179
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaag 205  Q
    |||||||| |||||||| |||| |||||||||||||||||||||    
T  8153136 tgagtttaactcagttggtatagacaatgcataatatatgtaag 8153179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 34521250 - 34521191
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||  ||||||||||||||||| ||||| ||| |||| ||||    
T  34521250 tgagtttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacc 34521191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 36371106 - 36371055
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| |||| |||||||||||| || | |||||||||||||||||||||||    
T  36371106 tcctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggt 36371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 43611425 - 43611484
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||| || |||| ||||    
T  43611425 tgagtttagctcagttggtatggacaatacataatatatgtaaggtatggggttcaaacc 43611484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 14388 - 14426
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatat 200  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  14388 tgagcttagctcagttggtataaacaatgcataatatat 14426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 26329177 - 26329123
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| ||  |||||||||||||| ||| ||||| |||||||||||||    
T  26329177 ttagctcagttgataagaacaatgcataatacatgcaaggttcggagttcgaacc 26329123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 44641522 - 44641572
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaagg 206  Q
    ||||| ||||||||||||||||| |||  ||||||||||||||||| ||||    
T  44641522 tcctcgtgagtttagctcagttgatatggacaatgcataatatatgcaagg 44641572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 13590105 - 13590170
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| | |  ||||||||||| ||||||||||| |||||||| ||||    
T  13590105 tcctcgtgagcttagctcagttggtttggacaatgcataaaatatgtaaggttcggagttcaaacc 13590170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 17917198 - 17917153
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||| |||  ||||||||||| |||||||||||    
T  17917198 tgagtttagctcagttgatatggacaatgcataaaatatgtaaggt 17917153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 24124890 - 24124845
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||||||   ||||||||||||||||| |||||    
T  24124890 tgagtttagctcagttgttaaggacaatgcataatatatgcaaggt 24124845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 24695554 - 24695599
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    ||||| ||||||||||||||||| ||| |||||| |||||||||||    
T  24695554 tcctcgtgagtttagctcagttggtatgaacaatacataatatatg 24695599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 28712589 - 28712537
Alignment:
Q  168 tagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||||||  ||||||||||||||||| ||||| |||||||| ||||    
T  28712589 tagctcagttgttatgcacaatgcataatatatgcaaggt-cggagttcaaacc 28712537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 42045438 - 42045373
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||  ||||||||||||||||| |||||  ||||||| ||||    
T  42045438 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaacc 42045373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 50372416 - 50372383
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatat 200  Q
    |||||||||||| |||||||||||||||||||||    
T  50372416 ttagctcagttgatataaacaatgcataatatat 50372383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 422537 - 422601
Alignment:
Q  151 caatatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagtt 215  Q
    |||||||||| |||||||| ||| | || ||  || ||||||||||||||||||||| |||||||    
T  422537 caatatcctcgtgagtttaactctgctggtaggaataatgcataatatatgtaaggttcggagtt 422601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 9639854 - 9639818
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  9639854 acaatgcataatatatgcaaggtccggagttcgaacc 9639818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 23045214 - 23045246
Alignment:
Q  184 aacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||||||||||||||||||||| ||||||||    
T  23045214 aacaatgcataatatatgtaaggtccggagttc 23045246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 51127957 - 51127905
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||| ||||||||||||||||  |||  |||||||||||||||| ||||||    
T  51127957 atcctcgtgagtttagctcagttaatatggacaatgcataatatatataaggt 51127905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 16193099 - 16193167
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||| ||||||||| ||||||| ||| |||||||||||| |||||||||||  ||||| ||||||    
T  16193099 atatcctcgtgagtttagttcagttggtatgaacaatgcataaaatatgtaaggtttggagtccgaacc 16193167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 12909232 - 12909181
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  12909232 tcctcgtgaatttagctcagttggtatgaacaatgcataatatatgtaaggt 12909181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 18489136 - 18489077
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||  |||||| |||||    
T  18489136 tgagtttagctcagttggtatagacaatgcataatatatgcaaggtctggagtttgaacc 18489077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 26409254 - 26409313
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||||||||||| |||  ||||||||||||||||||||||| ||| |||||||||    
T  26409254 tgagcttagctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaacc 26409313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 28604478 - 28604421
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||||||||||||||| || | ||||||||||||| ||||||||| ||| |||||||    
T  28604478 tgagtttagctcagttggtaaagacaatgcataataaatgtaaggtccggggttcgaa 28604421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 37932325 - 37932390
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||  ||||||||||||||||| ||||| ||| |||||||||    
T  37932325 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcgaacc 37932390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 42659578 - 42659623
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||    
T  42659578 tgagtttagctcaattgatataaataatgcataatatatgtaaggt 42659623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 26655472 - 26655524
Alignment:
Q  169 agctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||| |||  ||||||||||||||||||||||| ||| |||||||||    
T  26655472 agctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaacc 26655524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 26927057 - 26927109
Alignment:
Q  169 agctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||| |||  ||||||||||||||||||||||| ||| |||||||||    
T  26927057 agctcagttggtatggacaatgcataatatatgtaaggtccggggttcgaacc 26927109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 17239433 - 17239382
Alignment:
Q  170 gctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||| |||  ||||||||||||||||||||||  |||||||||||||    
T  17239433 gctcagttggtatggacaatgcataatatatgtaagggccggagttcgaacc 17239382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 27903114 - 27903168
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||||||| ||||||| ||| |||||||||||||||||| ||||| ||| ||||    
T  27903114 tgagtttagttcagttggtatgaacaatgcataatatatgcaaggttcggggttc 27903168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 29962350 - 29962404
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| ||||||| |||||||||||| || |||||||| |||||||||| |||||    
T  29962350 atatcttcttgagcttagctcagttgatagaaacaatgtataatatatgcaaggt 29962404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 30012448 - 30012394
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| ||||||| |||||||||||| || |||||||| |||||||||| |||||    
T  30012448 atatcttcttgagcttagctcagttgatagaaacaatgtataatatatgcaaggt 30012394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 38370769 - 38370807
Alignment:
Q  180 tataaacaatgcataatatatgtaaggtacggagttcga 218  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  38370769 tataaacaatgcataaaatatgtaaggtccggagttcga 38370807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 1642341 - 1642394
Alignment:
Q  168 tagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||| || ||||||||||||||||||| ||| |  ||||||||||||    
T  1642341 tagctcagttggtaaaaacaatgcataatatatgcaagatctggagttcgaacc 1642394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 6624771 - 6624836
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| ||||||||||||  ||  ||||||||||||||||| ||||| ||| |||||||||    
T  6624771 tcctcgtgagcttagctcagttggcatggacaatgcataatatatgcaaggtccggggttcgaacc 6624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 13409553 - 13409610
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||| ||  |||||||||||||||||  ||||| |||||||| ||||    
T  13409553 agtttagctcagttgataagaacaatgcataatatatacaaggtccggagttcaaacc 13409610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 19248474 - 19248519
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    ||||| |||| |||||||||||| |||| |||||||||||||||||    
T  19248474 tcctcgtgagcttagctcagttggtatagacaatgcataatatatg 19248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 31602880 - 31602840
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||||||| ||| |||||||||||||||||| |||||    
T  31602880 ttagctcagttggtatgaacaatgcataatatatgcaaggt 31602840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 37054335 - 37054275
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||| ||||||||||||||||| ||   |||||||||||||||| |||||| ||| ||||    
T  37054335 tcctcatgagtttagctcagttggtagggacaatgcataatatatataaggttcggggttc 37054275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 6459984 - 6459924
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacca 222  Q
    |||| ||| |||||||| |||  ||||||||||||||||||||||| ||||||||||||||    
T  6459984 tgagcttaactcagttgatatggacaatgcataatatatgtaaggtccggagttcgaacca 6459924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 3936628 - 3936687
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||||||||||| ||| |||||||||||||||||| ||||| ||| |||||||||    
T  3936628 tgagcttagctcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaacc 3936687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 7190503 - 7190449
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| ||  ||||||||||||||||||||| || |||||||||||||    
T  7190503 ttagctcagttggtaagaacaatgcataatatatgtaacgtccggagttcgaacc 7190449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 2649791 - 2649734
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||| ||   ||||||||||||||||| ||||| |||||||||||||    
T  2649791 agtttagctcagttggtagggacaatgcataatatatgcaaggtccggagttcgaacc 2649734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 12671814 - 12671749
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||| |||| ||||||||||| ||||| ||| | ||| |||||||||    
T  12671814 tcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaagatccggggttcgaacc 12671749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 18903818 - 18903773
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||    
T  18903818 tgagtttagctcagttgataaaaataatgcataatatatgtaaggt 18903773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 43722760 - 43722825
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||||||| |||||||| |||  ||||||||||||||||||||||| ||| |||| ||||    
T  43722760 tcctcgtgagtttaactcagttggtatggacaatgcataatatatgtaaggtccggggttcaaacc 43722825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 50380886 - 50380842
Alignment:
Q  172 tcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||    
T  50380886 tcagttggtatgaacaatgcataatatatgtaaggtccggagttc 50380842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 56298184 - 56298140
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaagg 206  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||    
T  56298184 tgagtttaactcaattgttatgaacaatgcataatatatgtaagg 56298140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 897426 - 897485
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||  |||||| |||||||||||||||| ||| |||| ||||    
T  897426 tgagtttagctcagttggtatggacaatgtataatatatgtaaggtccggggttcaaacc 897485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 21935007 - 21935058
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| |||||||| |||||||| |||| |||||||||||| ||||||||||    
T  21935007 tcctcgtgagtttaactcagttggtatagacaatgcataatgtatgtaaggt 21935058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 22164335 - 22164284
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| ||||||||||| ||||| ||  ||||||||||||||||||||||||    
T  22164335 tcctcgtgagtttagcttagttggtaggaacaatgcataatatatgtaaggt 22164284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 28435308 - 28435249
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||  ||||||||||||||||| ||||| ||| |||| ||||    
T  28435308 tgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaacc 28435249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 37422201 - 37422248
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggtacggagttcga 218  Q
    |||||||| ||| ||||||||||||||| |||||||| ||||||||||    
T  37422201 ctcagttggtattaacaatgcataatatgtgtaaggttcggagttcga 37422248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 17948183 - 17948137
Alignment:
Q  175 gttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||||    
T  17948183 gttggtataaacaatgcataaaatatgtaaggttcggagttcaaacc 17948137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 22040652 - 22040710
Alignment:
Q  163 gagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||| ||| |||| ||||    
T  22040652 gagtttagctcagttgatatggacaatgcataatatatgcaaggttcggggttcaaacc 22040710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 27740749 - 27740799
Alignment:
Q  170 gctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||||||| |||| ||||||||||| ||||| ||||| ||||||||||||    
T  27740749 gctcagttgatatagacaatgcataaaatatgcaaggttcggagttcgaac 27740799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 32923290 - 32923244
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggta 208  Q
    |||| ||| |||||||| ||| |||||||||||||||||||||||||    
T  32923290 tgagcttaactcagttggtatgaacaatgcataatatatgtaaggta 32923244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 36071145 - 36071203
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||||||| ||||||| ||   ||||||||||||||||||||||| ||| ||||||||    
T  36071145 tgagtttaggtcagttggtaaggacaatgcataatatatgtaaggttcggggttcgaac 36071203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 40284112 - 40284162
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaag 205  Q
    ||||||||||| ||||||| |||| |||  |||||||||||||||||||||    
T  40284112 atcctcttgagcttagctcggttggtatggacaatgcataatatatgtaag 40284162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 51436657 - 51436607
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||| ||  |||||||||||||||||| ||||| |||||||||||||    
T  51436657 ctcagttgatacgaacaatgcataatatatgcaaggttcggagttcgaacc 51436607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 54500570 - 54500624
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||| |||||||||||| || | ||||||||||||||||||||||| ||| ||||    
T  54500570 tgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttc 54500624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 10564525 - 10564480
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||    
T  10564525 tgagtttagctcagttggtatggacaatacataatatatgtaaggt 10564480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 11949829 - 11949764
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||  ||||||||||||||||| ||||| ||| |||| ||||    
T  11949829 tcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacc 11949764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 14079253 - 14079297
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||||||||||||| || |||||||||||||||||| |||||    
T  14079253 tgagtttagctcagttgt-attaacaatgcataatatatgcaaggt 14079297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 14577573 - 14577508
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||| ||   ||||||||||||||||| || || |||||||| ||||    
T  14577573 tcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaacc 14577508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 21266942 - 21266897
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||| |||||| | |||||||||||||||||||||||    
T  21266942 tgagcttagctcaattgttaaagacaatgcataatatatgtaaggt 21266897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 24665057 - 24664992
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||  | ||||||||||||||| ||||| ||| |||||||||    
T  24665057 tcctcgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttcgaacc 24664992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 35287573 - 35287508
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| ||| |||||||||||| ||||| ||||| ||| |||| ||||    
T  35287573 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggttccaacc 35287508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 36478986 - 36479051
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| ||||||| |||| |||  ||||||||||||||||||||||| ||  |||||||||    
T  36478986 tcctcatgagcttagctctgttggtatggacaatgcataatatatgtaaggttcgaggttcgaacc 36479051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 42198642 - 42198597
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    |||||||||  |||||||||||| |||||||||||||||| |||||    
T  42198642 tcctcttgaacttagctcagttggtataaacaatgcataaaatatg 42198597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 43374338 - 43374273
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||  ||||||||||| ||||| ||||| |||||||| ||||    
T  43374338 tcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcggagttcaaacc 43374273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 47266153 - 47266198
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||| ||||||| |||| |||||| ||||||||||||||||    
T  47266153 tgagtttagatcagttggtatagacaatgtataatatatgtaaggt 47266198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 54857681 - 54857616
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| ||||||| |||| |||||||||||||||| ||||| ||||| ||| |||| ||||    
T  54857681 tcctcgtgagcttagctcggttggtataaacaatgcataaaatatgcaaggtccggggttcaaacc 54857616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 10204846 - 10204886
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  10204846 ttagctcagttggtatggacaatgcataatatatgtaaggt 10204886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 16304165 - 16304113
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||| | ||||||||||||||| |||  ||||||||||||||||| |||||    
T  16304165 atcctcgtaagtttagctcagttggtatggacaatgcataatatatgcaaggt 16304113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 22411771 - 22411819
Alignment:
Q  168 tagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||||||||| |||  ||||||||||||||||||||||| ||| ||||    
T  22411771 tagctcagttggtatggacaatgcataatatatgtaaggttcggggttc 22411819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 37254972 - 37255008
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  37254972 acaatgcataatatatgtaaggtccggggttcgaacc 37255008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 38352763 - 38352823
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataat-atatgtaaggtacggagttcgaacc 221  Q
    |||| |||||||||||| |||| ||||||| |||| ||||||| |||| ||||||||||||    
T  38352763 tgagcttagctcagttgatatagacaatgcttaataatatgtacggtatggagttcgaacc 38352823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 42861769 - 42861805
Alignment:
Q  185 acaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  42861769 acaatgcataacatatgtaaggtccggagttcgaacc 42861805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 20517014 - 20517066
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaag 205  Q
    |||||||| ||||||||||||||||| ||  ||||||||||||||||||||||    
T  20517014 atatcctcgtgagtttagctcagttggtaagaacaatgcataatatatgtaag 20517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 33063981 - 33064045
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    ||||| |||| |||||||||||| |||  ||||||||||||||||| ||||| ||||||||||||    
T  33063981 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcgaac 33064045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 16221412 - 16221349
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||| ||||||||||||||||| ||| |||||||||||| ||||| ||||| ||| |||||||    
T  16221412 tcctcatgagtttagctcagttggtatgaacaatgcataaaatatgcaaggttcggggttcgaa 16221349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 19967412 - 19967478
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||| |||| |||||||||||| ||| ||||||||||||||| || ||||| |||||||| ||||    
T  19967412 atcctcgtgagcttagctcagttgatatgaacaatgcataatatgtgcaaggttcggagttcaaacc 19967478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 41853375 - 41853425
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| || |||||||||||||||||||||||||||| ||| |||||||||    
T  41853375 ctcagctgatataaacaatgcataatatatgtaaggtccggcgttcgaacc 41853425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 32957603 - 32957558
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  32957603 tgagtttagctcggttggtatgaacaatgcataatatatgtaaggt 32957558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 3196554 - 3196606
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||||| |||| || ||||||||| ||| ||||||||||||||||||||||||    
T  3196554 atcctcgtgagctttgctcagttgatatgaacaatgcataatatatgtaaggt 3196606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 24548112 - 24548164
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggta 208  Q
    ||||| |||||||| |||| ||| |||| ||||||||||||||||||||||||    
T  24548112 tcctcgtgagtttaactcaattggtatagacaatgcataatatatgtaaggta 24548164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 44488070 - 44488010
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacca 222  Q
    ||||||||| ||||||| ||   ||||||||||||||||||||||| |||||||| |||||    
T  44488070 tgagtttagttcagttggtaaggacaatgcataatatatgtaaggttcggagttcaaacca 44488010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 6765616 - 6765671
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacca 222  Q
    |||||||||||| |||  ||||||||||| ||||||||||| ||| ||||||||||    
T  6765616 ttagctcagttggtatggacaatgcataaaatatgtaaggtccggggttcgaacca 6765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 7029457 - 7029394
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    ||||| |||| |||||||||||| || ||||||| ||||||||||| ||| ||||| |||||||    
T  7029457 tcctcgtgagattagctcagttggtaaaaacaatacataatatatgcaagatacggtgttcgaa 7029394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 12124546 - 12124605
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| ||   ||||||||||||||||| ||||| ||| |||||||||    
T  12124546 tgagtttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacc 12124605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 18782606 - 18782555
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||| ||||||||||| ||||| || ||||||||||||||||||| |||||    
T  18782606 tcctcatgagtttagctaagttggtagaaacaatgcataatatatgcaaggt 18782555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 25186302 - 25186243
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||  ||||||||||||||||| ||||| ||| |||| ||||    
T  25186302 tgagtttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaaacc 25186243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 41672342 - 41672299
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||    
T  41672342 agtttagttcagttggtataaacaatgcataaaatatgtaaggt 41672299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 4238760 - 4238818
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    |||| |||||||||||  |||  ||||||||||||||||||||||| ||| ||||||||    
T  4238760 tgagcttagctcagttagtatggacaatgcataatatatgtaaggttcggggttcgaac 4238818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 12124690 - 12124744
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| ||   ||||||||||||||||| ||||| |||||||||||||    
T  12124690 ttagctcagttggtaaggacaatgcataatatatgcaaggtccggagttcgaacc 12124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 16877119 - 16877181
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcga 218  Q
    ||||| |||| ||||||||| || |||  ||||||||||||||||| ||||| ||||||||||    
T  16877119 tcctcgtgagcttagctcagctggtatggacaatgcataatatatgcaaggttcggagttcga 16877181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 16989250 - 16989312
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcga 218  Q
    ||||| |||| ||||||||| || |||  ||||||||||||||||| ||||| ||||||||||    
T  16989250 tcctcgtgagcttagctcagctggtatggacaatgcataatatatgcaaggttcggagttcga 16989312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 23756718 - 23756772
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| |||| ||||| ||||| ||||| ||||| |||||||||||||    
T  23756718 ttagctcagttgatatagacaatacataaaatatgcaaggttcggagttcgaacc 23756772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 25274884 - 25274830
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| ||  ||||||||||||||||||||||||  || |||||||||    
T  25274884 ttagctcagttggtaagaacaatgcataatatatgtaaggtctggggttcgaacc 25274830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 37984361 - 37984395
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatg 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  37984361 ttagctcagttggtataaacaatgcataatatatg 37984395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 6228640 - 6228681
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggta 208  Q
    |||||||| ||| |||||||||||||||||||||| ||||||    
T  6228640 ttagctcaattgatataaacaatgcataatatatgcaaggta 6228681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 7201502 - 7201567
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| | | |||||||||||||||||| || ||  ||||||||||||    
T  7201502 tcctcgtgagcttagctcagttggtttgaacaatgcataatatatgcaaagtctggagttcgaacc 7201567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 7537104 - 7537165
Alignment:
Q  155 atcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||| |||| ||| |||||||| ||  |||||||||||||||||| ||||| ||||||||    
T  7537104 atcctcgtgagattaactcagttgataggaacaatgcataatatatgcaaggtccggagttc 7537165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 17736788 - 17736837
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaag 205  Q
    ||||| |||| |||||||||||| ||| |||||||||||| |||||||||    
T  17736788 tcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgtaag 17736837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 19159951 - 19159996
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||||| ||| |||||||||||||||||| ||||| ||||||||    
T  19159951 ctcagttgatatgaacaatgcataatatatgcaaggttcggagttc 19159996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 19212953 - 19213018
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||||| |  ||||| ||||||||||| ||||| || ||||| ||||    
T  19212953 tcctcatgagtttagctcagttgttttggacaatacataatatatgcaaggttcgaagttcaaacc 19213018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 29734692 - 29734737
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    ||||||||||||||||| |||  ||||||||||||||||| |||||    
T  29734692 tgagtttagctcagttgatatggacaatgcataatatatgcaaggt 29734737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 41682447 - 41682402
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| ||| |||||||| |||||| |||||||||||||||||||||    
T  41682447 tgagcttaactcagttggtataaataatgcataatatatgtaaggt 41682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 3197145 - 3197089
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacgga 212  Q
    ||||| ||||||||||||||||| ||   ||||||||||||||||| ||||| ||||    
T  3197145 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaggttcgga 3197089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 9517075 - 9517031
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatat 200  Q
    ||||| |||| |||||||||||| ||| |||||||||||||||||    
T  9517075 tcctcgtgagattagctcagttggtatgaacaatgcataatatat 9517031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 19976154 - 19976214
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataat-atatgtaaggtacggagttcgaacc 221  Q
    ||||||||||||||||| |||  |||||||||||| ||||| ||||| ||| |||||||||    
T  19976154 tgagtttagctcagttggtatggacaatgcataataatatgcaaggtccggggttcgaacc 19976214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 34464474 - 34464430
Alignment:
Q  157 cctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    |||| ||||||||||||||||| |||  |||||||||||||||||    
T  34464474 cctcgtgagtttagctcagttggtatggacaatgcataatatatg 34464430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 37119318 - 37119274
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaagg 206  Q
    |||||||| |||||||| ||| |||||||||||||||||| ||||    
T  37119318 tgagtttaactcagttgatatgaacaatgcataatatatgcaagg 37119274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 1261176 - 1261230
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||| || ||||||||    
T  1261176 tgagtttagttcagttgatataaacaaagcataatatatgtaaagtccggagttc 1261230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 33610985 - 33610927
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaac 220  Q
    |||| |||||||||||||||   ||||||||||||||||| ||||| ||||||||||||    
T  33610985 tgagcttagctcagttgttacggacaatgcataatatatgcaaggtccggagttcgaac 33610927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 24099288 - 24099236
Alignment:
Q  169 agctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||| ||| |||||||||||||||||||||||||||| ||| ||| |||||    
T  24099288 agctcaattgatataaacaatgcataatatatgtaaggttcggggtttgaacc 24099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 31886014 - 31885962
Alignment:
Q  153 atatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaag 205  Q
    |||| ||| ||||||||| ||||||| ||| ||||||||||||||||||||||    
T  31886014 atattctcgtgagtttagttcagttggtatgaacaatgcataatatatgtaag 31885962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 36980995 - 36981054
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||||| ||||  |||| |||||| |||||||||||||||| |||||||||||||    
T  36980995 tgagcttagcttagttagtatagacaatgtataatatatgtaaggttcggagttcgaacc 36981054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 43539164 - 43539105
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||| |||||||||||| ||  |||||||||||||||||||||||| ||| |||| ||||    
T  43539164 tgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttcaaacc 43539105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 9522918 - 9522972
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| ||| |||||||||||||||||| |||||  || |||||||||    
T  9522918 ttagctcagttggtatgaacaatgcataatatatgcaaggtttggggttcgaacc 9522972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 27263351 - 27263401
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||| |||  ||||||||||||||||| ||||| |||||||||||||    
T  27263351 ctcagttggtatggacaatgcataatatatgcaaggttcggagttcgaacc 27263401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 27270245 - 27270295
Alignment:
Q  171 ctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||| |||  ||||||||||||||||| ||||| |||||||||||||    
T  27270245 ctcagttggtatggacaatgcataatatatgcaaggttcggagttcgaacc 27270295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 38553824 - 38553878
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||||| ||  ||||||||||||||||||||||||  || |||||||||    
T  38553824 ttagctcagttggtaagaacaatgcataatatatgtaaggtttggggttcgaacc 38553878  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 44558839 - 44558789
Alignment:
Q  157 cctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| ||||||||||||||||| |||  ||||||||||||||||| |||||    
T  44558839 cctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggt 44558789  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 3231052 - 3231117
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| ||||| |||||| |||| |||| |||||| |||||||||||  ||||||||||||    
T  3231052 tcctcctgagcttagcacagttggtatagacaacgcataaaatatgtaaggtctggagttcgaacc 3231117  T

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Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 7908596 - 7908653
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||||| ||||||| |||  ||||||||||| ||||||||||| ||| |||||||||    
T  7908596 agtttagttcagttggtatggacaatgcataaaatatgtaaggttcggggttcgaacc 7908653  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 8683065 - 8683110
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    ||||| |||| |||||||||||| |||| |||||||||||||||||    
T  8683065 tcctcgtgagcttagctcagttggtatagacaatgcataatatatg 8683110  T

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Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 10244722 - 10244787
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| |||  ||||||||||||||||| ||||| ||| |||| ||||    
T  10244722 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaacc 10244787  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 19684268 - 19684227
Alignment:
Q  166 tttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||| |||| |||||||||||||||||||||||    
T  19684268 tttaactcagttgatatagacaatgcataatatatgtaaggt 19684227  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 22267576 - 22267625
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaag 205  Q
    ||||| |||||||| |||||||| || | |||||||||||||||||||||    
T  22267576 tcctcgtgagtttaactcagttggtagagacaatgcataatatatgtaag 22267625  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 25251511 - 25251556
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| ||| |||||||| ||||||||||||||||||||| ||||||    
T  25251511 tgagcttaactcagttggtataaacaatgcataatatatataaggt 25251556  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 29734856 - 29734811
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    ||||| ||||||||||||||| | || |||||||||||||||||||    
T  29734856 tcctcgtgagtttagctcagtcgatagaaacaatgcataatatatg 29734811  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 36341131 - 36341066
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    |||||||||| ||| |||||||| ||| |||||||||||| ||||  ||||| |||||||| ||||    
T  36341131 tcctcttgagcttaactcagttggtatgaacaatgcataaaatatacaaggtccggagttcaaacc 36341066  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 48069897 - 48069852
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| ||||||||||||  || ||||||||||||||||||||||||    
T  48069897 tgagcttagctcagttgacatgaacaatgcataatatatgtaaggt 48069852  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 8879807 - 8879747
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacca 222  Q
    |||| ||| |||||||| |||| ||||||||||||||||| ||||| |||  |||||||||    
T  8879807 tgagcttaactcagttggtatagacaatgcataatatatgcaaggttcgggattcgaacca 8879747  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 20205825 - 20205865
Alignment:
Q  164 agtttagctcagttgttataaacaatgcataatatatgtaa 204  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  20205825 agtttagctcagttggtatggacaatgcataatatatgtaa 20205865  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 25246767 - 25246811
Alignment:
Q  157 cctcttgagtttagctcagttgttataaacaatgcataatatatg 201  Q
    |||| ||||||||||||||||| || | |||||||||||||||||    
T  25246767 cctcgtgagtttagctcagttgataaagacaatgcataatatatg 25246811  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 34807213 - 34807265
Alignment:
Q  156 tcctcttgagtttagctcagttgttata-aacaatgcataatatatgtaaggt 207  Q
    ||||| ||||||||||||||||| || | |||||||||||||||||| |||||    
T  34807213 tcctcgtgagtttagctcagttgataaagaacaatgcataatatatgcaaggt 34807265  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 14246 - 14200
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggta 208  Q
    |||||||| |||||||| ||| |||||||||||||||||| ||||||    
T  14246 tgagtttaactcagttggtatgaacaatgcataatatatgcaaggta 14200  T

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Target: scaffold0350 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 1254 - 1303
Alignment:
Q  167 ttagctcagttgttataaacaatgcataatatatgtaaggtacggagttc 216  Q
    |||||||||||| |||  |||||||||||||||||||||||  |||||||    
T  1254 ttagctcagttgatatggacaatgcataatatatgtaaggtctggagttc 1303  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 44423 - 44476
Alignment:
Q  166 tttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaa 219  Q
    |||| |||||||| || ||||||||||||||| |||||||||  ||||||||||    
T  44423 tttaactcagttggtaaaaacaatgcataatacatgtaaggtcgggagttcgaa 44476  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 35179 - 35224
Alignment:
Q  162 tgagtttagctcagttgttataaacaatgcataatatatgtaaggt 207  Q
    |||| |||||||||||  |||| |||||||||||||||||||||||    
T  35179 tgagcttagctcagttagtatagacaatgcataatatatgtaaggt 35224  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 118814 - 118879
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| |||| |||||||||||| | | |||||||||||| |||||||||||  ||||||| ||||    
T  118814 tcctcgtgagcttagctcagttggtttgaacaatgcataaaatatgtaaggtctggagttcaaacc 118879  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 239802 - 239867
Alignment:
Q  156 tcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagttcgaacc 221  Q
    ||||| ||||||||||||||||| ||   ||||||||||||||||| || || |||||||| ||||    
T  239802 tcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaaagtccggagttcaaacc 239867  T

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Target: scaffold0312 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 8035 - 7971
Alignment:
Q  151 caatatcctcttgagtttagctcagttgttataaacaatgcataatatatgtaaggtacggagtt 215  Q
    |||||||||| |||||||| ||| | || ||  || ||||||||||||||||||||| |||||||    
T  8035 caatatcctcgtgagtttaactctgctggtaggaataatgcataatatatgtaaggttcggagtt 7971  T

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