View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12941_low_2 (Length: 479)

Name: NF12941_low_2
Description: NF12941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12941_low_2
NF12941_low_2
[»] chr1 (48 HSPs)
chr1 (232-445)||(12019820-12020033)
chr1 (154-237)||(51382370-51382453)
chr1 (154-234)||(39150426-39150506)
chr1 (154-233)||(313748-313827)
chr1 (155-233)||(44918024-44918102)
chr1 (154-234)||(17919452-17919532)
chr1 (154-234)||(1502820-1502899)
chr1 (157-233)||(32716263-32716339)
chr1 (157-233)||(8062206-8062282)
chr1 (143-234)||(22167322-22167413)
chr1 (158-231)||(6754474-6754546)
chr1 (153-234)||(22331620-22331701)
chr1 (153-234)||(23576514-23576594)
chr1 (151-231)||(41624825-41624904)
chr1 (88-151)||(12019672-12019739)
chr1 (151-229)||(39627676-39627754)
chr1 (154-235)||(13321874-13321955)
chr1 (154-234)||(23591696-23591776)
chr1 (154-234)||(34801966-34802046)
chr1 (151-234)||(7824958-7825041)
chr1 (153-234)||(30171876-30171957)
chr1 (153-234)||(30187417-30187498)
chr1 (154-231)||(30363098-30363175)
chr1 (154-234)||(34050383-34050463)
chr1 (156-234)||(3121119-3121196)
chr1 (172-234)||(36490795-36490857)
chr1 (156-222)||(43317490-43317556)
chr1 (152-213)||(6180182-6180243)
chr1 (151-232)||(35512720-35512801)
chr1 (154-234)||(6307501-6307581)
chr1 (155-211)||(38539086-38539142)
chr1 (155-211)||(38561304-38561360)
chr1 (155-231)||(47355481-47355556)
chr1 (168-234)||(11744928-11744994)
chr1 (168-234)||(25465171-25465236)
chr1 (168-213)||(7520118-7520163)
chr1 (154-234)||(6520710-6520789)
chr1 (154-234)||(38812738-38812818)
chr1 (154-213)||(399543-399602)
chr1 (155-234)||(21854217-21854295)
chr1 (156-207)||(36578332-36578383)
chr1 (109-151)||(306396-306438)
chr1 (152-234)||(23808431-23808512)
chr1 (168-234)||(40799358-40799424)
chr1 (154-234)||(3168169-3168248)
chr1 (161-221)||(9661902-9661962)
chr1 (161-221)||(42589178-42589238)
chr1 (161-221)||(44012931-44012991)
[»] chr2 (44 HSPs)
chr2 (153-233)||(16919254-16919334)
chr2 (143-233)||(39904148-39904238)
chr2 (154-233)||(12016665-12016744)
chr2 (151-233)||(22705450-22705532)
chr2 (150-234)||(27665143-27665227)
chr2 (154-233)||(19228424-19228503)
chr2 (152-234)||(14377421-14377503)
chr2 (154-233)||(16126659-16126738)
chr2 (143-233)||(26229954-26230043)
chr2 (152-234)||(5583658-5583739)
chr2 (154-234)||(15411722-15411802)
chr2 (153-233)||(10690780-10690860)
chr2 (165-230)||(16123288-16123353)
chr2 (153-234)||(20566117-20566198)
chr2 (151-234)||(23932560-23932643)
chr2 (152-234)||(9747313-9747395)
chr2 (154-236)||(34214049-34214131)
chr2 (157-234)||(7720116-7720193)
chr2 (149-233)||(13351311-13351396)
chr2 (154-234)||(43388866-43388946)
chr2 (147-234)||(7757886-7757972)
chr2 (173-231)||(22162180-22162237)
chr2 (156-233)||(4579889-4579966)
chr2 (157-234)||(25998102-25998179)
chr2 (150-222)||(26003603-26003675)
chr2 (154-234)||(36612831-36612911)
chr2 (154-234)||(36620682-36620762)
chr2 (154-234)||(43806358-43806438)
chr2 (148-189)||(35729108-35729149)
chr2 (154-209)||(29795056-29795111)
chr2 (147-234)||(34817535-34817621)
chr2 (153-234)||(4821280-4821355)
chr2 (154-232)||(16754969-16755047)
chr2 (153-234)||(12438748-12438828)
chr2 (173-234)||(38248520-38248579)
chr2 (157-213)||(12919472-12919528)
chr2 (170-234)||(40562177-40562241)
chr2 (151-221)||(43941966-43942036)
chr2 (156-221)||(36731181-36731245)
chr2 (152-189)||(44023220-44023257)
chr2 (161-221)||(3286501-3286561)
chr2 (153-221)||(3504468-3504535)
chr2 (161-221)||(3951256-3951316)
chr2 (161-221)||(8847793-8847853)
[»] chr8 (54 HSPs)
chr8 (153-233)||(7140559-7140639)
chr8 (157-231)||(39701905-39701979)
chr8 (154-233)||(13328041-13328120)
chr8 (157-231)||(39703455-39703529)
chr8 (152-233)||(10129100-10129181)
chr8 (154-231)||(14816228-14816305)
chr8 (154-231)||(14829435-14829512)
chr8 (154-234)||(3306155-3306234)
chr8 (146-234)||(38527811-38527899)
chr8 (149-233)||(40210921-40211005)
chr8 (154-233)||(19343937-19344016)
chr8 (154-234)||(2161386-2161465)
chr8 (156-231)||(35678377-35678452)
chr8 (149-234)||(9743855-9743940)
chr8 (153-231)||(4080496-4080574)
chr8 (153-231)||(4084645-4084723)
chr8 (153-231)||(4102952-4103030)
chr8 (153-234)||(8284669-8284750)
chr8 (152-234)||(12131979-12132061)
chr8 (151-221)||(31812108-31812178)
chr8 (154-228)||(33514606-33514680)
chr8 (152-234)||(45005966-45006048)
chr8 (161-234)||(26364090-26364162)
chr8 (154-234)||(38843702-38843782)
chr8 (155-222)||(7750667-7750734)
chr8 (152-234)||(9580209-9580291)
chr8 (154-232)||(36967172-36967250)
chr8 (147-234)||(12345997-12346084)
chr8 (144-234)||(13496831-13496922)
chr8 (156-234)||(26682068-26682146)
chr8 (154-233)||(35745989-35746068)
chr8 (143-221)||(10543741-10543819)
chr8 (152-234)||(12189688-12189770)
chr8 (152-234)||(12434116-12434198)
chr8 (140-234)||(26834545-26834639)
chr8 (156-233)||(1203602-1203679)
chr8 (149-234)||(6818010-6818095)
chr8 (168-233)||(9801681-9801746)
chr8 (152-200)||(11117131-11117179)
chr8 (146-234)||(11923005-11923093)
chr8 (153-224)||(16832427-16832498)
chr8 (181-234)||(8140593-8140646)
chr8 (153-202)||(43717684-43717733)
chr8 (154-234)||(9824957-9825037)
chr8 (154-202)||(40716273-40716321)
chr8 (154-234)||(6850677-6850759)
chr8 (155-234)||(34869622-34869701)
chr8 (183-234)||(45516316-45516366)
chr8 (154-234)||(20514630-20514711)
chr8 (156-221)||(31261863-31261928)
chr8 (161-221)||(16586834-16586894)
chr8 (157-233)||(33430214-33430290)
chr8 (154-233)||(38213045-38213125)
chr8 (161-221)||(42781480-42781540)
[»] scaffold0061 (1 HSPs)
scaffold0061 (154-233)||(52879-52958)
[»] scaffold0017 (1 HSPs)
scaffold0017 (154-233)||(145676-145755)
[»] chr5 (41 HSPs)
chr5 (154-233)||(2795522-2795601)
chr5 (154-231)||(11636730-11636807)
chr5 (157-233)||(9184209-9184285)
chr5 (154-234)||(30839780-30839859)
chr5 (154-234)||(36597578-36597657)
chr5 (154-233)||(31366050-31366131)
chr5 (156-232)||(12642094-12642170)
chr5 (153-233)||(15190870-15190950)
chr5 (152-231)||(8103683-8103761)
chr5 (154-233)||(30328427-30328506)
chr5 (151-230)||(34578007-34578086)
chr5 (155-234)||(40512951-40513029)
chr5 (155-230)||(4047412-4047487)
chr5 (152-234)||(18841805-18841887)
chr5 (154-231)||(5958226-5958303)
chr5 (154-221)||(10665077-10665144)
chr5 (168-234)||(11375972-11376038)
chr5 (172-234)||(28629895-28629957)
chr5 (153-234)||(3398217-3398298)
chr5 (154-234)||(26376669-26376749)
chr5 (157-221)||(32020097-32020161)
chr5 (154-204)||(11250086-11250136)
chr5 (157-207)||(11692758-11692808)
chr5 (150-211)||(13516048-13516109)
chr5 (154-229)||(35469551-35469627)
chr5 (183-234)||(6863584-6863634)
chr5 (154-189)||(14466634-14466669)
chr5 (153-200)||(15241226-15241273)
chr5 (155-234)||(24329735-24329813)
chr5 (193-231)||(16174724-16174762)
chr5 (156-206)||(33072677-33072727)
chr5 (157-234)||(3737976-3738052)
chr5 (150-234)||(8716062-8716143)
chr5 (140-221)||(13761655-13761736)
chr5 (150-203)||(24014818-24014871)
chr5 (157-202)||(28378711-28378756)
chr5 (147-211)||(10658410-10658474)
chr5 (161-221)||(12332343-12332403)
chr5 (161-221)||(31613261-31613321)
chr5 (161-221)||(31704935-31704995)
chr5 (161-221)||(40454067-40454127)
[»] chr3 (42 HSPs)
chr3 (146-233)||(20938047-20938134)
chr3 (154-234)||(11610913-11610993)
chr3 (151-234)||(12515574-12515656)
chr3 (144-234)||(2571257-2571346)
chr3 (154-234)||(13495292-13495372)
chr3 (157-233)||(51339284-51339360)
chr3 (154-233)||(3863328-3863407)
chr3 (152-234)||(10307763-10307844)
chr3 (155-233)||(50364190-50364268)
chr3 (158-220)||(37444149-37444211)
chr3 (148-233)||(54621318-54621403)
chr3 (150-233)||(32553361-32553444)
chr3 (152-234)||(23638149-23638231)
chr3 (153-234)||(38389444-38389525)
chr3 (153-234)||(46845540-46845621)
chr3 (151-234)||(54527806-54527889)
chr3 (148-234)||(42180044-42180130)
chr3 (168-234)||(46492443-46492509)
chr3 (154-234)||(30214110-30214189)
chr3 (154-234)||(51618048-51618128)
chr3 (183-230)||(16875128-16875175)
chr3 (155-210)||(39365255-39365310)
chr3 (154-221)||(47386920-47386987)
chr3 (172-221)||(35094972-35095021)
chr3 (154-210)||(29685884-29685940)
chr3 (154-234)||(37055466-37055546)
chr3 (155-234)||(24086983-24087062)
chr3 (148-234)||(8165638-8165724)
chr3 (154-232)||(50204401-50204479)
chr3 (161-234)||(24569337-24569410)
chr3 (154-234)||(51567917-51567998)
chr3 (168-219)||(2379184-2379235)
chr3 (151-234)||(15863005-15863088)
chr3 (181-220)||(40497073-40497112)
chr3 (156-207)||(43750052-43750103)
chr3 (168-222)||(54027043-54027096)
chr3 (176-233)||(9710964-9711021)
chr3 (154-212)||(28992899-28992959)
chr3 (155-207)||(27549537-27549589)
chr3 (161-221)||(29932464-29932524)
chr3 (161-221)||(29981618-29981678)
chr3 (156-204)||(48240218-48240266)
[»] chr7 (35 HSPs)
chr7 (143-233)||(47120294-47120384)
chr7 (154-234)||(19889339-19889419)
chr7 (154-233)||(9331960-9332039)
chr7 (154-234)||(24250312-24250392)
chr7 (157-233)||(36548560-36548636)
chr7 (155-234)||(12086030-12086109)
chr7 (156-233)||(39757210-39757287)
chr7 (154-234)||(5909381-5909461)
chr7 (154-234)||(33342987-33343066)
chr7 (148-234)||(45501451-45501537)
chr7 (152-234)||(46290007-46290088)
chr7 (157-233)||(3561978-3562054)
chr7 (145-231)||(39869112-39869198)
chr7 (158-231)||(7170005-7170077)
chr7 (154-231)||(23982858-23982935)
chr7 (151-234)||(19868109-19868192)
chr7 (143-217)||(4161869-4161943)
chr7 (149-222)||(24463066-24463139)
chr7 (154-201)||(34270264-34270311)
chr7 (151-236)||(39475843-39475929)
chr7 (154-211)||(32117813-32117870)
chr7 (154-234)||(12650819-12650899)
chr7 (157-213)||(47457582-47457638)
chr7 (156-234)||(25709499-25709577)
chr7 (156-222)||(42750289-42750355)
chr7 (154-234)||(4969771-4969851)
chr7 (154-234)||(7040351-7040431)
chr7 (171-234)||(24699151-24699213)
chr7 (152-234)||(29692640-29692722)
chr7 (151-221)||(38798320-38798390)
chr7 (192-233)||(384530-384571)
chr7 (148-233)||(24639535-24639619)
chr7 (152-189)||(27696703-27696740)
chr7 (152-221)||(28061435-28061504)
chr7 (161-221)||(42593506-42593566)
[»] chr6 (34 HSPs)
chr6 (155-230)||(5362996-5363071)
chr6 (157-233)||(2830781-2830857)
chr6 (153-234)||(28943869-28943949)
chr6 (154-234)||(14228226-14228305)
chr6 (154-234)||(17552687-17552766)
chr6 (154-234)||(33017723-33017802)
chr6 (148-231)||(26602533-26602616)
chr6 (156-234)||(1017878-1017956)
chr6 (153-234)||(8977566-8977647)
chr6 (177-233)||(31069682-31069738)
chr6 (175-233)||(22974673-22974731)
chr6 (175-233)||(23813670-23813728)
chr6 (154-234)||(18332788-18332868)
chr6 (154-234)||(30623324-30623404)
chr6 (154-221)||(31791028-31791096)
chr6 (148-235)||(6016848-6016935)
chr6 (151-234)||(10887024-10887107)
chr6 (158-213)||(17596315-17596370)
chr6 (154-211)||(29863425-29863482)
chr6 (157-231)||(31169866-31169940)
chr6 (155-203)||(1814912-1814960)
chr6 (154-234)||(24979249-24979329)
chr6 (154-234)||(34692352-34692432)
chr6 (152-202)||(10345671-10345721)
chr6 (156-222)||(12454066-12454132)
chr6 (154-230)||(31568111-31568184)
chr6 (156-233)||(32615560-32615640)
chr6 (171-212)||(2086957-2086998)
chr6 (156-227)||(27819734-27819807)
chr6 (151-221)||(31503738-31503808)
chr6 (151-197)||(34243298-34243344)
chr6 (155-188)||(2086999-2087032)
chr6 (181-233)||(3850577-3850629)
chr6 (161-221)||(34733813-34733873)
[»] chr4 (54 HSPs)
chr4 (154-230)||(49228355-49228431)
chr4 (151-233)||(36000040-36000122)
chr4 (148-234)||(40049551-40049636)
chr4 (154-234)||(7349687-7349767)
chr4 (154-234)||(50352301-50352380)
chr4 (155-234)||(9759242-9759320)
chr4 (155-233)||(49650210-49650288)
chr4 (153-234)||(10658544-10658624)
chr4 (153-234)||(10872689-10872769)
chr4 (145-234)||(23545465-23545554)
chr4 (157-233)||(23553571-23553648)
chr4 (155-233)||(10389368-10389446)
chr4 (152-234)||(34941274-34941356)
chr4 (153-234)||(17409821-17409902)
chr4 (168-233)||(29190916-29190981)
chr4 (169-234)||(39876844-39876908)
chr4 (170-234)||(10813594-10813658)
chr4 (140-234)||(54495737-54495831)
chr4 (154-234)||(27019258-27019338)
chr4 (154-234)||(52391296-52391376)
chr4 (155-234)||(19468193-19468272)
chr4 (143-234)||(47326992-47327083)
chr4 (143-234)||(47341788-47341879)
chr4 (152-203)||(48910965-48911016)
chr4 (154-221)||(49332331-49332398)
chr4 (152-234)||(2096867-2096949)
chr4 (154-234)||(8736910-8736990)
chr4 (154-234)||(16667484-16667564)
chr4 (158-234)||(19451000-19451076)
chr4 (158-234)||(49181074-49181150)
chr4 (152-232)||(3085348-3085428)
chr4 (156-228)||(25843291-25843363)
chr4 (154-206)||(36968286-36968338)
chr4 (140-219)||(45742351-45742431)
chr4 (142-221)||(9326982-9327061)
chr4 (142-221)||(9373704-9373783)
chr4 (145-192)||(39876798-39876845)
chr4 (148-221)||(9382016-9382089)
chr4 (157-234)||(33632302-33632379)
chr4 (154-206)||(1377452-1377504)
chr4 (168-211)||(27756574-27756617)
chr4 (187-234)||(41415656-41415703)
chr4 (150-221)||(41887681-41887752)
chr4 (154-188)||(9971710-9971744)
chr4 (151-221)||(32459327-32459397)
chr4 (144-234)||(42480022-42480112)
chr4 (183-233)||(53961350-53961400)
chr4 (156-213)||(3728249-3728306)
chr4 (168-221)||(40681961-40682014)
chr4 (188-233)||(48910902-48910947)
chr4 (157-234)||(51691343-51691419)
chr4 (144-189)||(53376558-53376603)
chr4 (151-234)||(19838791-19838872)
chr4 (154-234)||(27362389-27362469)
[»] scaffold0011 (1 HSPs)
scaffold0011 (154-230)||(13084-13160)
[»] scaffold0727 (1 HSPs)
scaffold0727 (157-233)||(5692-5769)
[»] scaffold0111 (2 HSPs)
scaffold0111 (151-234)||(37214-37297)
scaffold0111 (150-234)||(40974-41058)
[»] scaffold0155 (1 HSPs)
scaffold0155 (175-233)||(3513-3572)
[»] scaffold0036 (1 HSPs)
scaffold0036 (152-234)||(94118-94200)
[»] scaffold0129 (1 HSPs)
scaffold0129 (151-234)||(13758-13841)
[»] scaffold0009 (2 HSPs)
scaffold0009 (171-233)||(43479-43540)
scaffold0009 (149-190)||(193376-193417)
[»] scaffold0073 (1 HSPs)
scaffold0073 (154-234)||(16634-16714)
[»] scaffold0631 (1 HSPs)
scaffold0631 (157-206)||(443-492)
[»] scaffold0028 (1 HSPs)
scaffold0028 (154-234)||(31800-31880)


Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 232 - 445
Target Start/End: Original strand, 12019820 - 12020033
Alignment:
Q  232 ttttaatactttctctaatccgttgttttattgggtggaattaatgtgagtctcataatttgaaaattgatcacataagaagtggtgagacttttgattt 331  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||||    
T  12019820 ttttaatactttctctaatccgttgttttattgggtggaatcaatgtgagtcttataatttaaaaatttatcaaataagaagtggtgagacttttgattt 12019919  T
Q  332 catcaaataaaagagtgaatggtaaagattgttaaaaatataatgtttttagcgcttctcatctaaacatacatcggttggttcacatgggacaaaataa 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12019920 catcaaataaaagagtgaatggtaaagattgttaaaaatataatgtttttagcgcttctcatctaaacatacaccggttggttcacatgggacaaaataa 12020019  T
Q  432 tgctaaatttaata 445  Q
    ||||||||||||||    
T  12020020 tgctaaatttaata 12020033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 51382370 - 51382453
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattttaa 237  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  51382370 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattttaa 51382453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 39150506 - 39150426
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  39150506 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattattt 39150426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 313748 - 313827
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  313748 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattatt 313827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 44918024 - 44918102
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  44918024 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattatt 44918102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 17919452 - 17919532
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  17919452 gggtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattattt 17919532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 1502899 - 1502820
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||    
T  1502899 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaa-caacaattattt 1502820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 32716339 - 32716263
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| |||||||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||||||||    
T  32716339 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattatt 32716263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 8062206 - 8062282
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 8062282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 22167322 - 22167413
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||   |||||| |||||||||||||| ||||||| ||||||||||||    
T  22167322 tattatattatgggtttgtctaccatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattt 22167413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 6754474 - 6754546
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||    
T  6754474 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattg-aaaccaacaatta 6754546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 22331620 - 22331701
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||| ||||||||||||||  || |||| |||||||||||||| ||||||| ||||||||||||    
T  22331620 tgggtttgtctaacatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattattt 22331701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 23576594 - 23576514
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||  || ||||| ||| ||||||||||||||||    
T  23576594 tgggtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattg-aaaccaacaattattt 23576514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 41624825 - 41624904
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||||| ||||||||| |||||||||||||||||||||| | |||||||| |||||||||||| ||| |||||||||||||    
T  41624825 tatgggattgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattg-aaaccaacaatta 41624904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 12019672 - 12019739
Alignment:
Q  88 tcatatcctttaaatgtacattttcatttggag----ataaatttataaaataaaatattattatttt 151  Q
    ||||||||||| |||||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  12019672 tcatatccttttaatgtacattttcatttggagtgagataaatttataaaataaaatattattatttt 12019739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 39627754 - 39627676
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaat 229  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||| ||| |||||||  ||||||| |||||||    
T  39627754 tatgggtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaat 39627676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 13321874 - 13321955
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatttt 235  Q
    ||||||||||||| ||||||| |||| |||||||||   |||||| |||||||||||||| ||||||| |||||||||||||    
T  13321874 gggtttgtctaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttt 13321955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 23591696 - 23591776
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| |||||||||||||| | |||||||| |||||| ||||| ||||||| ||| ||||||||    
T  23591696 gggtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattattt 23591776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 34801966 - 34802046
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  34801966 gggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttattt 34802046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 7825041 - 7824958
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| | ||||||||||    
T  7825041 tatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattattt 7824958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 30171876 - 30171957
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| ||||| ||||||| ||| | ||||||    
T  30171876 tgggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttattt 30171957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 30187417 - 30187498
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| ||||| ||||||| ||| | ||||||    
T  30187417 tgggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttattt 30187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 30363175 - 30363098
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||||||| ||||||||  ||  |||||||||||||||  ||||||| |||||||||||| |||||||||||||||||    
T  30363175 gggtttgtttaacctgttaaaacttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaatta 30363098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 34050463 - 34050383
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||||||||||||| | ||| |||||||  || || || ||||||| ||||||||||||    
T  34050463 gggtttgtctaacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattattt 34050383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 3121119 - 3121196
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||  ||||||||||| || |||||||||||| ||||||||| || ||||| ||| ||||||||||||||||    
T  3121119 gtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattattt 3121196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 36490795 - 36490857
Alignment:
Q  172 caatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||| | || |||||||||||| ||||| ||||||| ||||||||||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattattt 36490857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 43317490 - 43317556
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaac 222  Q
    ||||||| ||| |||||||||||| ||||||||| | ||||||||||||||||| ||| ||||||||    
T  43317490 gtttgtcaaacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaac 43317556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 6180182 - 6180243
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttt 213  Q
    ||||||||||||||| ||||||| ||||||||||||||   |||||| ||||||||||||||    
T  6180182 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt 6180243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 35512720 - 35512801
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattat 232  Q
    |||||||||||||||| ||||||| |||||| |||||||   |||||| |||||||||||||| ||| ||| ||||| ||||    
T  35512720 tatgggtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttat 35512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 6307501 - 6307581
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||||||||  | |||| ||| ||| ||| ||||||||||||    
T  6307501 gggtttgtctaacatgtgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattattt 6307581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 38539086 - 38539142
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttt 211  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||| |||| ||||||    
T  38539086 ggtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaacttt 38539142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 38561304 - 38561360
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttt 211  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||| |||| ||||||    
T  38561304 ggtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaacttt 38561360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 47355556 - 47355481
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||| |||||  |||||||||||||||||||||| | |||||||||||  |||||||| ||||||| |||||||||    
T  47355556 ggtttatctaaaatgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaa-caacaatta 47355481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 11744994 - 11744928
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||| ||||||||||||| | || ||||||||  |||||||| ||||||| ||||||||||||    
T  11744994 tgtgcaatgttgcacatgttaaagaaattaaaagtataaactttttattgaaaaacaacaattattt 11744928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 25465171 - 25465236
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||||| || ||||||||||| ||| |||| |||| || ||||||||||||    
T  25465171 tgtgcaatattgcacatgttaaagtcactaaaagtagcaac-ttttattgagaaacaacaattattt 25465236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 7520163 - 7520118
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttt 213  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||    
T  7520163 tgtgcaatattgcacatgttaaagcaactaaaagtagtaaattttt 7520118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 6520710 - 6520789
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||| ||||||| |||| ||||| | |||||||||||  ||| |||| ||||||| ||||||||||||    
T  6520710 gggtttgtctaacatgtacaatattacacaggttaaagaaactaaaagtaacaac-ttttcttgaaaaacaacaattattt 6520789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 38812738 - 38812818
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||| |||| ||||||| |||| |||||||||   |||||| |||||||||||||| ||  ||| ||||||||||||    
T  38812738 gggtttgtttaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattattt 38812818  T

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Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 399602 - 399543
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttt 213  Q
    ||||||||||||| || ||||||||||||||||||  | ||||||| ||||||| |||||    
T  399602 gggtttgtctaacatgcgcaatattgcacatgttatagcaactaaacgtagtaatttttt 399543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 21854295 - 21854217
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| ||||||| ||||  ||||||||| || ||||||||||||| ||||  ||||||| ||||| ||||||    
T  21854295 ggtttgtctaacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttattt 21854217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 36578332 - 36578383
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    |||| |||||| |||||||||||||||||||||| | || ||||||||||||    
T  36578332 gtttatctaacatgtgcaatattgcacatgttaaagcaattaaaagtagtaa 36578383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 306396 - 306438
Alignment:
Q  109 tttcatttggagataaatttataaaataaaatattattatttt 151  Q
    ||||||||||||||| || |||||||||||||| |||||||||    
T  306396 tttcatttggagatagatatataaaataaaataatattatttt 306438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 23808431 - 23808512
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||| ||| ||||||||||||||  ||||| | |||||||| ||||| ||| ||| ||||| ||||||    
T  23808431 atgggtttgtctaacatgtacaacattgcacatgttaaaataactgatagtagtaa-tttttcttggaaaacaacatttattt 23808512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 40799424 - 40799358
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||||  | |||||||||||  |||||||| |||||||  || ||||||||    
T  40799424 tgtgcaatattgcacatgttagagcaactaaaagtatgaactttttattgaaaaataaaaattattt 40799358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 3168248 - 3168169
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| ||| | || ||||| ||| ||| ||||||||||||    
T  3168248 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtgggaa-ttttttttggaaaacaacaattattt 3168169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 9661902 - 9661962
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  9661902 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 9661962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 42589178 - 42589238
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  42589178 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 42589238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 44012931 - 44012991
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  44012931 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 44012991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 16919334 - 16919254
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16919334 tgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 16919254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 39904238 - 39904148
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  39904238 tattattttatgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 39904148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 12016665 - 12016744
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12016665 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattatt 12016744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 22705450 - 22705532
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22705450 tatgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 22705532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 27665227 - 27665143
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  27665227 ttatgggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattattt 27665143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 19228424 - 19228503
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19228424 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 19228503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 14377421 - 14377503
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  14377421 atgggtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattattt 14377503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 16126738 - 16126659
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  16126738 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 16126659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 26230043 - 26229954
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  26230043 tattcttttaagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattatt 26229954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 5583739 - 5583658
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  5583739 atgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 5583658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 15411802 - 15411722
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  15411802 gggtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataattt 15411722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 10690780 - 10690860
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||  || ||||||||||||||||    
T  10690780 tgggtttgtctaacatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattatt 10690860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 16123288 - 16123353
Alignment:
Q  165 acctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  16123288 acctgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaatt 16123353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 20566198 - 20566117
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||| ||| |||| ||| ||||||| ||||||||||||    
T  20566198 tgggtctgtctaacatgtgcaatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattattt 20566117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 23932560 - 23932643
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||| ||||||||||   |||||||  |||||||||||    
T  23932560 tatgggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattattt 23932643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 9747313 - 9747395
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||||| | ||||||||||  |||||||||||||||||| ||| ||||||| |||||| |||||    
T  9747313 atgggtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactattt 9747395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 34214131 - 34214049
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatttta 236  Q
    ||||||||||||| |||  |||| |||||||||||| | |||||||| |||||| ||||| ||||||||||||||||||||||    
T  34214131 gggtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattatttta 34214049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 7720116 - 7720193
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||||||| ||||||||||||    
T  7720116 tttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattattt 7720193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 13351396 - 13351311
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtag-taactttttgttgaaaaccaacaattatt 233  Q
    ||||||||| || ||||  ||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||| |||||||||||    
T  13351396 tttatgggtctgactaatatgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaattatt 13351311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 43388946 - 43388866
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||  ||||||||||||||||| |||| | |||||||||||| || ||||| ||||||| ||||||||||||    
T  43388946 gggtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattattt 43388866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 7757972 - 7757886
Alignment:
Q  147 attttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||| ||||||||||| ||||||| |||| |||||||||||||||||||||||  || ||||| || |||||||||||||||||    
T  7757972 atttcatgagtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttatt-aaaaccaacaattattt 7757886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 22162237 - 22162180
Alignment:
Q  173 aatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  22162237 aatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaaccaacaatta 22162180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 4579966 - 4579889
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||  |||||||||||  ||||||| || ||||||||    
T  4579966 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaaacaccaattatt 4579889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 25998179 - 25998102
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||| ||| |||||| ||||||||||||||| ||||||||||||   |||||||| ||||||| ||||||||||||    
T  25998179 tttgtcgaacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattattt 25998102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 26003675 - 26003603
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaac 222  Q
    ||||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| | ||||||    
T  26003675 ttatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttttggaaaac 26003603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 36612911 - 36612831
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||| ||||||||  ||||||| |||||||||||||| ||| ||| ||||| ||||||    
T  36612911 gggtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttattt 36612831  T

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Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 36620762 - 36620682
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||| ||||||||  ||||||| |||||||||||||| ||| ||| ||||| ||||||    
T  36620762 gggtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttattt 36620682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 43806358 - 43806438
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||   || ||| |||||||||||||| ||| ||| ||||||||||||    
T  43806358 gggtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattattt 43806438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 35729108 - 35729149
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  35729108 ttttatgggtttgtctaacatgtgcaatattgcacatgttaa 35729149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 29795056 - 29795111
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaact 209  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||||| ||| ||||    
T  29795056 gggtttgtctaacatgtgcaatattgcacatattaaagtaactaaaaatagcaact 29795111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 34817535 - 34817621
Alignment:
Q  147 attttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||| | ||||||||||||| | ||||  ||||||||| ||  |||| ||| ||||||| ||||||||||||    
T  34817535 attttatgggtttgtctaacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaa-caacaattattt 34817621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 4821280 - 4821355
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| |||||||||||||| |||||| || |||      |||||||||||  ||||||||||||||||||||    
T  4821280 tgggtttgtctaacatgtgcaatattgcatatgttatggcaac------tagtaacttttcattgaaaaccaacaattattt 4821355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 16754969 - 16755047
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattat 232  Q
    ||||||||||||| ||||||| |||||| |||||||   |||||| |||||||||||||| ||| ||| ||||| ||||    
T  16754969 gggtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaacttttttttggaaaacaacatttat 16755047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 12438828 - 12438748
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||| |||| |||||||||||||| ||||| ||  |||||||| || ||||||||  || |||||||||||||||||    
T  12438828 tgggtttgtataacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcatt-aaaaccaacaattattt 12438748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 38248579 - 38248520
Alignment:
Q  173 aatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||||||||||| ||| || ||||| || |||||||||||||||||    
T  38248579 aatattgcacatgttaaggtaactaaaa-tagcaagtttttatt-aaaaccaacaattattt 38248520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 12919528 - 12919472
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttt 213  Q
    |||||||||| |||||||||||||||||||||| | || |||||||| ||| |||||    
T  12919528 tttgtctaacatgtgcaatattgcacatgttaaagcaattaaaagtattaatttttt 12919472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 40562241 - 40562177
Alignment:
Q  170 tgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||| ||||||||| |||  |||||| ||||| ||||| ||||||| ||||||||||||    
T  40562241 tgcaatattgtacatgttaaagtagttaaaagcagtaagtttttattgaaaatcaacaattattt 40562177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 43942036 - 43941966
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  43942036 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 43941966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 36731181 - 36731245
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||||||| ||||||| ||||||| |||||||  ||||||| ||||||||||||  |||||||    
T  36731181 gtttgtctaacatgtgcaa-attgcacttgttaagaaaactaaatgtagtaacttttcattgaaaa 36731245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 44023257 - 44023220
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  44023257 atgggtttttctaacctatgcaatattgcacatgttaa 44023220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 3286501 - 3286561
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  3286501 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 3286561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 3504468 - 3504535
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||||| ||||| |||||| |  |||||||||||| | |||| |||||||||||||||| |||||||    
T  3504468 tgggtttg-ctaacatgtgcatttctgcacatgttaaagcaactgaaagtagtaactttttattgaaaa 3504535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 3951256 - 3951316
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  3951256 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 3951316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 8847793 - 8847853
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  8847793 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 8847853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 7140639 - 7140559
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7140639 tgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattatt 7140559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 39701979 - 39701905
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39701979 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaatta 39701905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 13328120 - 13328041
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  13328120 gggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 13328041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 39703455 - 39703529
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  39703455 tttgtctaacgtgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttaaaaaccaacaatta 39703529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 10129100 - 10129181
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||    
T  10129100 atgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattatt 10129181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 14816305 - 14816228
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  14816305 gggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaatta 14816228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 14829435 - 14829512
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  14829435 gggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaatta 14829512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 3306234 - 3306155
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  3306234 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattattt 3306155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 38527811 - 38527899
Alignment:
Q  146 tattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||| |||||||    
T  38527811 tatttaatgggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacgattattt 38527899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 40211005 - 40210921
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  40211005 tttaagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattatt 40210921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 19344016 - 19343937
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  19344016 gggtttgtcttacatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattatt 19343937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 2161386 - 2161465
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  2161386 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 2161465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 35678452 - 35678377
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaatta 35678377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 9743855 - 9743940
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||| |||||||||||| ||||||||||||  |||||||||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  9743855 tttattggtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattattt 9743940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 4080574 - 4080496
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||||  |||||||| ||||||||    
T  4080574 tgggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaatta 4080496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 4084723 - 4084645
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||||  |||||||| ||||||||    
T  4084723 tgggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaatta 4084645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 4103030 - 4102952
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||||  |||||||| ||||||||    
T  4103030 tgggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaatta 4102952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 8284750 - 8284669
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||||||| || ||||  |||||||||||    
T  8284750 tgggtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattattt 8284669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 12131979 - 12132061
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||| |||||||||||||| | |||||||||||| |||||||| ||||||| | |||| |||||    
T  12131979 atgggtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtattt 12132061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 31812108 - 31812178
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| |||||||    
T  31812108 tatgggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaa 31812178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 33514680 - 33514606
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaa 228  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||| |||| ||||||| ||||||    
T  33514680 gggtttgcctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaaaacaacaa 33514606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 45005966 - 45006048
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  45005966 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattattt 45006048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 26364162 - 26364090
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||||| || |||| ||||||||||||    
T  26364162 tctaacatgtgcaatattgcacatgttaaggtaactaaaagtagaaagtttttatt-aaaatcaacaattattt 26364090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 38843702 - 38843782
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  38843702 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattattt 38843782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 7750667 - 7750734
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaac 222  Q
    |||||||||||| ||||||||||||||||||||||   |||||||||||| |||||||| ||||||||    
T  7750667 ggtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaac 7750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 9580291 - 9580209
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||  ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  9580291 atgggtttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattattt 9580209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 36967250 - 36967172
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattat 232  Q
    ||||||||||||| ||||||| |||| ||||||||||  |||||| |||||||||||||| ||| ||| ||||||||||    
T  36967250 gggtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattat 36967172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 12345997 - 12346084
Alignment:
Q  147 attttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||| |||||||| || ||||||| ||| ||||||||||   || ||| |||||||||||||| ||||||| ||||||||||||    
T  12345997 attttatgagtttgtctgacatgtgcaacattacacatgttaaaacaattaatagtagtaactttttcttgaaaaacaacaattattt 12346084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 13496922 - 13496831
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaact-aaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||| | |||| |||| ||||||||||   |||||||  |||||||||||    
T  13496922 attactttttgggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaaatagtaactttacattgaaaaagaacaattattt 13496831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 26682068 - 26682146
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-ctttttgttgaaaaccaacaattattt 234  Q
    ||||||||||| ||||||||||||||||||||||   |||||||||||||||  ||||| ||||||| ||||||||||||    
T  26682068 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaa-caacaattattt 26682146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 35746068 - 35745989
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||| |  |||||| ||||||||||| | ||||||||  |||||||| ||||||||||    
T  35746068 gggtttgtctaacatgtgcaatattgaaattgttaaagtaactaaaagaaataacttttcattgaaaacaaacaattatt 35745989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 10543819 - 10543741
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||||||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  10543819 tattattttatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 10543741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 12189770 - 12189688
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||| |||| ||||||  ||||||||||||||   |||||| |||| ||||||||| ||||||| ||||||||||||    
T  12189770 atgggtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattattt 12189688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 12434198 - 12434116
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||| |||| ||||||  ||||||||||||||   |||||| |||| ||||||||| ||||||| ||||||||||||    
T  12434198 atgggtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattattt 12434116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 26834545 - 26834639
Alignment:
Q  140 tattattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||| |  ||||||||||||| | ||||| |||||||||| |||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  26834545 tattattattattagggtttgtctaacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttattt 26834639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 1203602 - 1203679
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||| | ||||||||||||||| ||||| |||||||||  ||||||||||  |||||||| || |||||||    
T  1203602 gtttgtctaacatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaaacaaataattatt 1203679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 6818010 - 6818095
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||||||||||||| |||||||||||| | ||||||| | |||||||| ||||||||||   |||||||  |||||||||||    
T  6818010 tttaagggtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattattt 6818095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 9801681 - 9801746
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||| |||| |||| |||| |||||||||||||||||  ||||||| |||||||||||    
T  9801681 tgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattatt 9801746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 11117179 - 11117131
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaa 200  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  11117179 atgggtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaa 11117131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 11923005 - 11923093
Alignment:
Q  146 tattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||||||||| |||||||||||||||| |||||   |||| ||| |  ||||||||| ||||||| ||  ||||||||    
T  11923005 tattttatgggtttgtctaacatgtgcaatattgcacaagttaaaacaactgaaaatgataactttttattgaaaaacactaattattt 11923093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 16832498 - 16832427
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaacca 224  Q
    |||||||||||| | |||||| |||||||||||||||||  |||||||| || |||||||| || |||||||    
T  16832498 tgggtttgtctatcatgtgcagtattgcacatgttaaggatactaaaagaagcaactttttattaaaaacca 16832427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 8140593 - 8140646
Alignment:
Q  181 acatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||| ||||||||||||| | ||||  ||||||||||||||||||||    
T  8140593 acatgttaaggcaactaaaagtagtgatttttcattgaaaaccaacaattattt 8140646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 43717733 - 43717684
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||||||||||| |||||||| ||||||||||||| | ||||||||||    
T  43717733 tgggtttgtctaacatgtgcaatgttgcacatgttaaagcaactaaaagt 43717684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 9824957 - 9825037
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| | |||||||||| | ||||||| | || ||||| |||||||||||| ||||||| || |||| ||||    
T  9824957 gggtttgtctaacatatgcaatattgtatatgttaatgcaattaaaattagtaactttttattgaaaaacatcaataattt 9825037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 40716273 - 40716321
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||| |||||| ||||||||||||||||||||||  |||||||||||    
T  40716273 gggtttatctaacatgtgcaatattgcacatgttaatctaactaaaagt 40716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 6850759 - 6850677
Alignment:
Q  154 gggtttgtctaacctgtgcaa--tattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||| | |||||||  |||||||||||  ||   |||||| |||||||||||||| ||||||| ||||||||||||    
T  6850759 gggtttgtctatcatgtgcaacatattgcacatgacaaaacaactaatagtagtaactttttattgaaaaacaacaattattt 6850677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 34869701 - 34869622
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||| ||| ||||||| ||||||| ||||||   |||||| | |||||||||||| || |||| ||||||||||||    
T  34869701 ggtttgtcaaacatgtgcaacattgcacgtgttaaaacaactaataatagtaactttttcttcaaaaacaacaattattt 34869622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 45516316 - 45516366
Alignment:
Q  183 atgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||| |||||||||||||||||||||| ||| |||| |||||||||||    
T  45516316 atgttaagataactaaaagtagtaactttttattg-aaactaacaattattt 45516366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 20514630 - 20514711
Alignment:
Q  154 gggtttgtctaacctgtgcaa-tattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||| ||| | |||| |||||||||| || || |||||||  | |||||||||    
T  20514630 gggtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattattt 20514711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 31261863 - 31261928
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||||||| | |  ||||||||||||||||| | |||||||||||  || |||||||||||||    
T  31261863 gtttgtctaacatttttaatattgcacatgttaaagcaactaaaagtatcaaatttttgttgaaaa 31261928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 16586894 - 16586834
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  16586894 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 16586834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 33430290 - 33430214
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| ||| ||| ||||||||| ||||   |||||| |||| ||||||||| || |||| |||||||||||    
T  33430290 tttgtctaacatgttcaacattgcacatattaaaacaactaatagtaataactttttcttaaaaaacaacaattatt 33430214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 38213125 - 38213045
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaact-ttttgttgaaaaccaacaattatt 233  Q
    |||||||| |||| ||||||| ||||||||||||||   |||||| ||| |||||| |||| ||||||| || ||||||||    
T  38213125 gggtttgtttaacatgtgcaacattgcacatgttaaaacaactaatagtggtaactgtttttttgaaaaacagcaattatt 38213045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 42781480 - 42781540
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  42781480 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 42781540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 52958 - 52879
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  52958 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 52879  T

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Target: scaffold0017 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 145676 - 145755
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  145676 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 145755  T

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Target: chr5 (Bit Score: 68; Significance: 4e-30; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 2795522 - 2795601
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  2795522 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 2795601  T

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Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 11636730 - 11636807
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||    
T  11636730 gggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaatta 11636807  T

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Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 9184209 - 9184285
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  9184209 tttgtctaacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattatt 9184285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 30839780 - 30839859
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  30839780 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 30839859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 36597578 - 36597657
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  36597578 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattg-aaaccaacaattattt 36597657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 31366131 - 31366050
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaact--ttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||  |||| |||||||||||||||||||    
T  31366131 gggtttgtctaacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattatt 31366050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 12642170 - 12642094
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattat 232  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||||| ||||  ||||||||||||||||||    
T  12642170 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattat 12642094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 15190870 - 15190950
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||||| ||||  |||||||| ||||||||||    
T  15190870 tgggtttgtctaacatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattatt 15190950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 8103761 - 8103683
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||    
T  8103761 atgggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattg-aaaccaacaatta 8103683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 30328506 - 30328427
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||  || ||||||||||||||||    
T  30328506 gggtttgtctaacatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattatt 30328427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 34578007 - 34578086
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||  ||||||| ||||||||    
T  34578007 tatgggtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaatt 34578086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 40512951 - 40513029
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||||||||||    
T  40512951 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattg-aaatcaacaattattt 40513029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 4047412 - 4047487
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    ||||| |||||| | | |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  4047412 ggtttatctaacatatacaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatt 4047487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 18841887 - 18841805
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  18841887 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattattt 18841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 5958303 - 5958226
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||||||||||||| ||||  ||||||| |||||||||    
T  5958303 gggtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaatta 5958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 10665144 - 10665077
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  10665144 gggtttgtccaacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaa 10665077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 11375972 - 11376038
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattattt 11376038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 28629895 - 28629957
Alignment:
Q  172 caatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||| | |||||||| || ||||||||  ||||||||||||||||||||    
T  28629895 caatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattattt 28629957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 3398217 - 3398298
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| | | ||||||||    
T  3398217 tgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattattt 3398298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 26376749 - 26376669
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| |||| |||||||||   || ||| |||||||||||||| ||| ||| ||||||||||||    
T  26376749 gggtttgtctaacatgtgcaacattgtacatgttaaaacaaataatagtagtaactttttcttggaaaacaacaattattt 26376669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 32020161 - 32020097
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||||||| ||||||||||||||| |||||||| |||||||  |||||||||||  |||||||    
T  32020161 tttgtctaacatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaa 32020097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 11250136 - 11250086
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtag 204  Q
    |||||||| |||| |||||||||||||||||||||| | ||||||||||||    
T  11250136 gggtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaagtag 11250086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 11692808 - 11692758
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    |||||||||| ||| ||||||||||||||||||  ||||||||||||||||    
T  11692808 tttgtctaacatgtacaatattgcacatgttaaaataactaaaagtagtaa 11692758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 13516109 - 13516048
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttt 211  Q
    |||||||||| |||||  |||| ||||||||||||||||||| ||||||| |||| ||||||    
T  13516109 ttatgggtttatctaatatgtgtaatattgcacatgttaaggaaactaaatgtagcaacttt 13516048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 35469551 - 35469627
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-ctttttgttgaaaaccaacaat 229  Q
    ||||||||||||| |||| | || |||||||||||| |||||||||||||| ||  ||||| ||||||| |||||||    
T  35469551 gggtttgtctaacatgtgaattagtgcacatgttaaagtaactaaaagtagcaatttttttattgaaaaacaacaat 35469627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 6863584 - 6863634
Alignment:
Q  183 atgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 6863634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 14466669 - 14466634
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14466669 gggtttgtctaacatgtgcaatattgcacatgttaa 14466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 15241273 - 15241226
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaa 200  Q
    |||||||||||||| | |||||||||||||||||||| | ||||||||    
T  15241273 tgggtttgtctaacatatgcaatattgcacatgttaaagaaactaaaa 15241226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 24329813 - 24329735
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| ||||||| ||||  ||||||||| || ||||||||||||| ||||  ||||||| ||||| ||||||    
T  24329813 ggtttgtctaacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttattt 24329735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 16174762 - 16174724
Alignment:
Q  193 aactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaatta 16174724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 33072677 - 33072727
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    |||||| |||| ||||||||||||||||||||||   ||||||||||||||    
T  33072677 gtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaagtagta 33072727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 3738052 - 3737976
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||  ||||||| ||||||||||||||   |||||| |||||||||||||| | | ||| ||||||||||||    
T  3738052 tttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt-tcggaaaacaacaattattt 3737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 8716143 - 8716062
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||| ||||||||||| | |||||||||||| ||||||| | ||||  ||||||||| ||||| ||| ||| ||||||||||||    
T  8716143 ttatgagtttgtctaacgtatgcaatattgcatatgttaaagaaact--aagtagtaa-tttttcttggaaaacaacaattattt 8716062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 13761655 - 13761736
Alignment:
Q  140 tattattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||| |||  ||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  13761655 tattattttttcttggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 13761736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 24014871 - 24014818
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagta 203  Q
    |||| |||||||||||| ||||||| ||||||||||||||   |||||||||||    
T  24014871 ttataggtttgtctaacatgtgcaacattgcacatgttaaaacaactaaaagta 24014818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 28378711 - 28378756
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||||| | |||||||||||||||||||||| |||| |||||||    
T  28378711 tttgtctagcatgtgcaatattgcacatgttaaagtaattaaaagt 28378756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 10658474 - 10658410
Alignment:
Q  147 attttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttt 211  Q
    |||||| |||||||| |||| ||||| ||||| |||||| ||| | |||||||||||| ||||||    
T  10658474 attttaagggtttgtttaacatgtgcgatattacacatgataaaggaactaaaagtagcaacttt 10658410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 12332343 - 12332403
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  12332343 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 12332403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 31613321 - 31613261
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  31613321 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 31613261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 31704935 - 31704995
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  31704935 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 31704995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 40454067 - 40454127
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  40454067 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 40454127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 20938047 - 20938134
Alignment:
Q  146 tattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  20938047 tattttatgtgtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattatt 20938134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 11610913 - 11610993
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  11610913 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattattt 11610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 12515656 - 12515574
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||||    
T  12515656 tatgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatt-aaaaccaacaattattt 12515574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 2571257 - 2571346
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  2571257 attatttattgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 2571346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 13495292 - 13495372
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  13495292 gggtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattattt 13495372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 51339360 - 51339284
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||    
T  51339360 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattatt 51339284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 3863328 - 3863407
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||| || ||||||||    
T  3863328 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattatt 3863407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 10307763 - 10307844
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  10307763 atgggtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattg-aaaccaacaattattt 10307844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 50364190 - 50364268
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |  |||||||||||||||||||    
T  50364190 ggtttgtctaacatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattatt 50364268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 37444149 - 37444211
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaa 220  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaa 37444211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 54621403 - 54621318
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||| || |||||||||| |||||||||||||| |||||||||||| |||||||||||| ||||  || ||||||||||||||||    
T  54621403 ttttaaggatttgtctaacatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattatt 54621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 32553361 - 32553444
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||  ||||||| ||| |||||||    
T  32553361 ttataggtttatctaacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattatt 32553444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 23638231 - 23638149
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||||||||  ||||||||| ||||| |||||||||||||| | ||||||| || |||||||||    
T  23638231 atgggtttgtctaacatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattattt 23638149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 38389444 - 38389525
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  38389444 tgggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttattt 38389525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 46845621 - 46845540
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||  ||||||||||||||||| |||| | |||||||||||| || ||||| ||||||| ||||||||||||    
T  46845621 tgggtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattattt 46845540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 54527889 - 54527806
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  54527889 tatgagtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattattt 54527806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 42180044 - 42180130
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| | | ||||||||    
T  42180044 ttttatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattattt 42180130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 46492509 - 46492443
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||||| | |||||||||| |||| ||||| ||||||| ||||||||||||    
T  46492509 tgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattattt 46492443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 30214189 - 30214110
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||| |||||  ||||| |||||||| |||||||||||  ||||||| ||||||||||||    
T  30214189 gggtttgtctaacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattattt 30214110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 51618048 - 51618128
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||   ||||||||| || || |||||  |||||| ||||||||||||    
T  51618048 gggtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattattt 51618128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 16875175 - 16875128
Alignment:
Q  183 atgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaatt 16875128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 39365310 - 39365255
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactt 210  Q
    |||||||||||| |||||||||||||||||||||| |  |||||||||||||||||    
T  39365310 ggtttgtctaacatgtgcaatattgcacatgttaaagctactaaaagtagtaactt 39365255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 47386920 - 47386987
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||||||||| ||||||||||||| ||| |||| | ||||||||||||||| ||||| |||||||    
T  47386920 gggtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaa 47386987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 35094972 - 35095021
Alignment:
Q  172 caatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaa 35095021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 29685884 - 29685940
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactt 210  Q
    ||||| |||||| |||||||||||||||||||||| || |||||||| |||||||||    
T  29685884 gggttcgtctaatctgtgcaatattgcacatgttatggcaactaaaattagtaactt 29685940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 37055546 - 37055466
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||| |||||||||| ||||||| | |||||||| ||||||||||   |||||||  |||||||||||    
T  37055546 gggtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattattt 37055466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 24086983 - 24087062
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| ||||||| ||||||||| ||||   |||||| |||||||| ||||| || |||| ||||||||||||    
T  24086983 ggtttgtctaacatgtgcaacattgcacatcttaaaacaactaacagtagtaaatttttcttaaaaaacaacaattattt 24087062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 8165638 - 8165724
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||||   |||||| | |||||||||||| ||| ||| |||| |||||||    
T  8165638 ttttaagggtttgtctaacatgtgcaacattgcacattttaaaacaactaataatagtaacttttttttggaaaacaacgattattt 8165724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 50204401 - 50204479
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattat 232  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| |||  |||||||||    
T  50204401 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattat 50204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 24569410 - 24569337
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||| |||||||||||| ||||||||||  ||||| || || ||||||||| ||||||| || |||||||||    
T  24569410 tctaacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattattt 24569337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 51567998 - 51567917
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaact-ttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| || |||| ||||||||||||||   |||||| |||||||||| |||| ||| ||| ||||||||||||    
T  51567998 gggtttgtctaacatgcgcaacattgcacatgttaaaacaactaatagtagtaacttttttcttggaaaacaacaattattt 51567917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 2379235 - 2379184
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaa 219  Q
    ||||||||||||||||||||||   ||||||||||||||| ||||| |||||    
T  2379235 tgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattgaa 2379184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 15863088 - 15863005
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||| ||||||| |||||||||||||||||||||  | || ||||||||| ||||||   |||||||  |||||||||||    
T  15863088 tatgagttcgtctaacatgtgcaatattgcacatgttacaggaattaaaagtagcaactttacattgaaaaagaacaattattt 15863005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 40497073 - 40497112
Alignment:
Q  181 acatgttaaggtaactaaaagtagtaactttttgttgaaa 220  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  40497073 acatgttaaggcaactaaaagtagtaactttttattgaaa 40497112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 43750052 - 43750103
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    ||||||||||| || ||||||||||||||||||||  | |||||||||||||    
T  43750052 gtttgtctaacatgggcaatattgcacatgttaagacatctaaaagtagtaa 43750103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 54027096 - 54027043
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaac 222  Q
    ||||||||||||||||||||||| | |||||||| || |||||||| ||||||||    
T  54027096 tgtgcaatattgcacatgttaagat-actaaaagaagcaactttttattgaaaac 54027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 9710964 - 9711021
Alignment:
Q  176 attgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||||   |||||||| |||||| ||||| ||||||| |||||||||||    
T  9710964 attgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattatt 9711021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 28992959 - 28992899
Alignment:
Q  154 gggtttgtctaacctgtgcaatat--tgcacatgttaaggtaactaaaagtagtaactttt 212  Q
    ||||||||||||| ||||||||||  ||||||||||||   || |||||||||||||||||    
T  28992959 gggtttgtctaacatgtgcaatatattgcacatgttaaaacaattaaaagtagtaactttt 28992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 27549537 - 27549589
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    |||||||||||  ||||||| ||||||||||||||   |||||||||||||||    
T  27549537 ggtttgtctaatatgtgcaacattgcacatgttaaaacaactaaaagtagtaa 27549589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 29932524 - 29932464
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  29932524 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 29932464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 29981678 - 29981618
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  29981678 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 29981618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 48240266 - 48240218
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtag 204  Q
    ||||||||||| |||| |||||| |||||||||| | ||||||||||||    
T  48240266 gtttgtctaacatgtgtaatattacacatgttaaagaaactaaaagtag 48240218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 47120384 - 47120294
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||    
T  47120384 tattgttttatgggtttgtctaacatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 47120294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 19889339 - 19889419
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  19889339 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattattt 19889419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 9331960 - 9332039
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  9331960 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 9332039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 24250312 - 24250392
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||    
T  24250312 gggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattattt 24250392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 36548636 - 36548560
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattatt 36548560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 12086109 - 12086030
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  12086109 ggtttgtctaacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattattt 12086030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 39757287 - 39757210
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  39757287 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattatt 39757210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 5909461 - 5909381
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||    
T  5909461 gggtttgactaacatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattattt 5909381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 33342987 - 33343066
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  33342987 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 33343066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 45501451 - 45501537
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||||||||||||| || |||| ||||||||||||    
T  45501451 ttttatgggtttgtctaacatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattattt 45501537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 46290007 - 46290088
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  46290007 atgggtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 46290088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 3562054 - 3561978
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||| |||||||    
T  3562054 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattatt 3561978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 39869112 - 39869198
Alignment:
Q  145 ttattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    |||| ||| ||||||||||||| | |||||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||||    
T  39869112 ttatcttaagggtttgtctaacatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaatta 39869198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 7170005 - 7170077
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||| |||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||    
T  7170005 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattg-aaaccaacaatta 7170077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 23982935 - 23982858
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||  || ||||||||||||||    
T  23982935 gggtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaatta 23982858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 19868109 - 19868192
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||  ||||||| || |||||||||    
T  19868109 tatgagtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattattt 19868192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 4161869 - 4161943
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttg 217  Q
    |||||||| | |||| |||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  4161869 tattatttaaagggtatgtctaacatgtgtaatattgcacatgttaaaggaactaaaagtagtaactttttgttg 4161943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 24463139 - 24463066
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaac 222  Q
    |||||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||| || || ||||||||    
T  24463139 tttatgggtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaac 24463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 34270264 - 34270311
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaag 201  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34270264 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaag 34270311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 39475843 - 39475929
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaac-tttttgttgaaaaccaacaattatttta 236  Q
    ||||| ||| |||||| ||||||| ||||||||||||||   |||||| ||||||||| ||||| ||||||| ||||||||||||||    
T  39475843 tatggatttctctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttttttgaaaaacaacaattatttta 39475929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 32117813 - 32117870
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttt 211  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||| |||| ||||||    
T  32117813 gggtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaacttt 32117870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 12650819 - 12650899
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||| |||| | |||||||||||| ||||||||||  |||||||| |||||||||||  |||||||| | |||||||||    
T  12650819 gggtttatctagcatgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattattt 12650899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 47457638 - 47457582
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttt 213  Q
    |||||||||| ||||||||||||||||||||||   ||||||||||||||| |||||    
T  47457638 tttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttt 47457582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 25709577 - 25709499
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| |||||| |||| |||||||||||||||||   ||||||||||||||| ||||| |||| || ||||||| ||||    
T  25709577 gtttttctaacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataattt 25709499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 42750289 - 42750355
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaac 222  Q
    |||||| |||| |||||||||||||| ||||||| | |||||||| || ||||||||| ||||||||    
T  42750289 gtttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaac 42750355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 4969771 - 4969851
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| ||||||| |||||| ||| ||| | | ||||||||    
T  4969771 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattattt 4969851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 7040431 - 7040351
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| | ||||| |||||| ||||||| |||||||||||  | |||| ||| ||| ||| ||||||||||||    
T  7040431 gggtttgtctaacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattattt 7040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 24699151 - 24699213
Alignment:
Q  171 gcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||||||||   ||||||| |||||||||||  ||||||| ||||||||||||    
T  24699151 gcaatattgcacatgttaagactactaaaa-tagtaacttttcattgaaaaacaacaattattt 24699213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 29692722 - 29692640
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| ||||||  ||||||||||||||   |||||| | || ||| ||||| ||| ||| ||||||||||||    
T  29692722 atgggtttgtctaacatgtgcatcattgcacatgttaaaacaactaataatattaattttttcttggaaaacaacaattattt 29692640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 38798390 - 38798320
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  38798390 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 38798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 384571 - 384530
Alignment:
Q  192 taactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||||||||||  ||||||| |||||||||||    
T  384571 taactaaaagtagtaacttttcattgaaaatcaacaattatt 384530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 24639535 - 24639619
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| |||| ||||| | | |  ||||| |||| || |||||||||||    
T  24639535 ttttaagggtttgtctaacatgtgcaata-tgcacatgttaaagtaattaaaaatggaatttttttattgacaaacaacaattatt 24639619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 27696703 - 27696740
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  27696703 atgggtttgtctaacatgtggaatattgcacatgttaa 27696740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 28061504 - 28061435
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  28061504 atggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 28061435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 42593566 - 42593506
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  42593566 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 42593506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 5363071 - 5362996
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  5363071 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatt 5362996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 2830857 - 2830781
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  2830857 tttgtctaacatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 2830781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 28943949 - 28943869
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||||||||||||    
T  28943949 tgggtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattattt 28943869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 14228305 - 14228226
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||||||||||||    
T  14228305 gggtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattattt 14228226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 17552766 - 17552687
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| | | ||||||||||||||||    
T  17552766 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcg-aaaccaacaattattt 17552687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 33017723 - 33017802
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| || ||||| || |||||||||||||||||    
T  33017723 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttatt-aaaaccaacaattattt 33017802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 26602616 - 26602533
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||   ||||||||||||||||    
T  26602616 ttttaagggtttgtctaacatgtgcaatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaaccaacaatta 26602533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 1017956 - 1017878
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||| ||||||||| |||||||| | |  ||||||||||||||||||||| |||||||||||||||||||||    
T  1017956 gtttgtctaacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattattt 1017878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 8977647 - 8977566
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||  ||||||| ||||||| ||||    
T  8977647 tgggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcattt 8977566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 31069738 - 31069682
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattatt 31069682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 22974731 - 22974673
Alignment:
Q  175 tattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 22974673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 23813670 - 23813728
Alignment:
Q  175 tattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 23813728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 18332868 - 18332788
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  18332868 gggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttattt 18332788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 30623324 - 30623404
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||| ||||||||||   |||||| |||||||||||||| ||||||| ||||||||||||    
T  30623324 gggtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattt 30623404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 31791096 - 31791028
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgtt-aaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||    
T  31791096 gggtttgtctaacatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaaa 31791028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 6016848 - 6016935
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatttt 235  Q
    ||||| ||||||||||||| ||||||| |||||||||| ||||  | ||||||||||||||||||  ||||||| ||||| |||||||    
T  6016848 ttttaagggtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttatttt 6016935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 10887024 - 10887107
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||| ||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  10887024 tatggggttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttattt 10887107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 17596315 - 17596370
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttt 213  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 29863482 - 29863425
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttt 211  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||| ||||||||||    
T  29863482 gggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaacttt 29863425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 31169940 - 31169866
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatta 231  Q
    ||||||||||||||||||  |||||||||||||||  ||||||| |||||| ||||  ||||||||||| |||||    
T  31169940 tttgtctaacctgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataatta 31169866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 1814960 - 1814912
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagta 203  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||    
T  1814960 ggtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaagta 1814912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 24979329 - 24979249
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| | |||||||||||| ||||||| | || |||||||    
T  24979329 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaaaacgacgattattt 24979249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 34692352 - 34692432
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| | | ||||||||    
T  34692352 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattattt 34692432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 10345721 - 10345671
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||||||||    
T  10345721 atgggtctgtctaacatgtgcaatattgcacatgttaaagaaactaaaagt 10345671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 12454066 - 12454132
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaac 222  Q
    |||||| |||| |||||||||||||||||||||||  || |||| ||||||| ||||| ||||||||    
T  12454066 gtttgtgtaacatgtgcaatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaac 12454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 31568111 - 31568184
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    |||||||||||||  ||||||||||||||||||||||||||  || |||||   |||||| ||||||| ||||||||    
T  31568111 gggtttgtctaacacgtgcaatattgcacatgttaaggtaatcaagagtag---ctttttattgaaaatcaacaatt 31568184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 32615640 - 32615560
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaag---tagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||| |||| |||| ||||||||| |||||||||||||||||||   |||||||||||  ||||||| || ||||||||    
T  32615640 gtttgtttaacatgtgtaatattgcatatgttaaggtaactaaaagtactagtaacttttcattgaaaatcatcaattatt 32615560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 2086998 - 2086957
Alignment:
Q  171 gcaatattgcacatgttaaggtaactaaaagtagtaactttt 212  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaattttt 2086957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 27819807 - 27819734
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaac--tttttgttgaaaaccaaca 227  Q
    ||||||||||  ||||||||||||||||| |||| | |||||||| || ||||  ||||| |||||||||||||    
T  27819807 gtttgtctaagatgtgcaatattgcacatattaaagcaactaaaaatattaacattttttattgaaaaccaaca 27819734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 31503738 - 31503808
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  31503738 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 31503808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 34243298 - 34243344
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaacta 197  Q
    |||| ||||||||||  |||||||||||||||||||||| |||||||    
T  34243298 tatgagtttgtctaaaatgtgcaatattgcacatgttaaagtaacta 34243344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 2087032 - 2086999
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgtta 188  Q
    |||||||||||| |||||||||||||||||||||    
T  2087032 ggtttgtctaacatgtgcaatattgcacatgtta 2086999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 3850577 - 3850629
Alignment:
Q  181 acatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||||||| |||||||||||| |||||||  ||||||| ||| |||||||    
T  3850577 acatgttaaggcaactaaaagtagcaacttttcattgaaaatcaataattatt 3850629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 34733873 - 34733813
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  34733873 tctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 34733813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 49228355 - 49228431
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  49228355 gggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatt 49228431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 36000122 - 36000040
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||| |||| |||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36000122 tatgagtttatctaacatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattatt 36000040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 40049551 - 40049636
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| | | ||||||||||||||||    
T  40049551 ttttatgggtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatag-aaaccaacaattattt 40049636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 7349687 - 7349767
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||    
T  7349687 gggtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattattt 7349767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 50352301 - 50352380
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  50352301 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 50352380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 9759320 - 9759242
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  9759320 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 9759242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 49650210 - 49650288
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||| ||||||||||    
T  49650210 ggtttgtctaacctgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattatt 49650288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 10658624 - 10658544
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  10658624 tgggtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 10658544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 10872769 - 10872689
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||| ||| ||||||||||||||||    
T  10872769 tgggtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattattt 10872689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 23545465 - 23545554
Alignment:
Q  145 ttattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||||||| ||||||||||||    
T  23545465 ttattttatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattattt 23545554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 23553571 - 23553648
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-ctttttgttgaaaaccaacaattatt 233  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  23553571 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattatt 23553648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 10389446 - 10389368
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||||||| ||||||||  |||||||||||||||||||    
T  10389446 ggtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattatt 10389368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 34941274 - 34941356
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||||||  |||||||| ||||||| |||||| |||||    
T  34941274 atgggtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactattt 34941356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 17409821 - 17409902
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||||||| ||||||||||||    
T  17409821 tgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattt 17409902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 29190981 - 29190916
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  29190981 tgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 29190916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 39876844 - 39876908
Alignment:
Q  169 gtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattattt 39876908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 10813658 - 10813594
Alignment:
Q  170 tgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattattt 10813594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 54495831 - 54495737
Alignment:
Q  140 tattattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||| |  ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  54495831 tattattattattagggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttattt 54495737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 27019258 - 27019338
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  27019258 gggtttgtctaacgtgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattattt 27019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 52391296 - 52391376
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||  |||| ||| |||||||||||||  ||||||| |||||||||||||| ||||||| ||||||||||||    
T  52391296 gggtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattattt 52391376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 19468193 - 19468272
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  19468193 ggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattattt 19468272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 47327083 - 47326992
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||  | ||||||||||||| ||||  ||||||| ||| | ||||||    
T  47327083 tattgttttaagggtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttattt 47326992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 47341879 - 47341788
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||  | ||||||||||||| ||||  ||||||| ||| | ||||||    
T  47341879 tattgttttaagggtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttattt 47341788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 48911016 - 48910965
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagta 203  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  48911016 atgggtttgtctaacatgtgcaatattgcacatgttaagataactaaaagta 48910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 49332331 - 49332398
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  49332331 gggtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaa 49332398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 2096867 - 2096949
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||||| |||||||||||||||| |||||   ||||||||||   |||||||| ||||||| ||||||||||||    
T  2096867 atgggtttgtctaacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattattt 2096949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 8736990 - 8736910
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| ||||| ||||||| ||| | ||||||    
T  8736990 gggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttattt 8736910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 16667564 - 16667484
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| ||||  ||||||| ||||| ||||||    
T  16667564 gggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttattt 16667484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 19451076 - 19451000
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||||||||||||    
T  19451076 ttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattattt 19451000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 49181074 - 49181150
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||| ||| |||  ||||||| ||||||| ||||    
T  49181074 ttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcattt 49181150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 3085348 - 3085428
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattat 232  Q
    ||||||||||||||| ||||||| ||||||||||||||   || ||| |||||||| ||||| |||||||  |||||||||    
T  3085348 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaattttttcttgaaaaataacaattat 3085428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 25843291 - 25843363
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaa 228  Q
    ||||||||||| ||| ||||||   ||||||||| | ||||||||||||||||||||| ||||||| ||||||    
T  25843291 gtttgtctaacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaa 25843363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 36968286 - 36968338
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    |||||| |||||| ||||||||||| |||||||||| ||||||||||||||||    
T  36968286 gggtttatctaacatgtgcaatattacacatgttaaagtaactaaaagtagta 36968338  T

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Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 45742351 - 45742431
Alignment:
Q  140 tattattatt-ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaa 219  Q
    |||||||||| ||| ||||||||||||| ||||||| ||||||||||||||   |||||| |||| ||||||||| |||||    
T  45742351 tattattattattaagggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtattaactttttcttgaa 45742431  T

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Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 9327061 - 9326982
Alignment:
Q  142 ttattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||| |||| |||||||||||||| | |||||||||||| ||||||| | ||||||  ||||||||||||  |||||||    
T  9327061 ttatttttttttgggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9326982  T

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Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 9373783 - 9373704
Alignment:
Q  142 ttattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||| |||| |||||||||||||| | |||||||||||| ||||||| | ||||||  ||||||||||||  |||||||    
T  9373783 ttatttttttctgggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9373704  T

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Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 39876798 - 39876845
Alignment:
Q  145 ttattttatgggtttgtctaacctgtgcaatattgcacatgttaaggt 192  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  39876798 ttattatatgggtttgtctaacatgtgcaatattgcatatgttaaggt 39876845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 9382089 - 9382016
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||| |||||||||||||| | |||||||||||| ||||||| | ||||||  ||||||||||||  |||||||    
T  9382089 ttttctgggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9382016  T

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Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 33632379 - 33632302
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||| ||||||| |||  |||||| ||   |||||| |||||||||||||| ||||||| ||||||||||||    
T  33632379 tttgtctaacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattattt 33632302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 1377452 - 1377504
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    |||||||||||||  |||||||||| |||||||||| |||| |||||||||||    
T  1377452 gggtttgtctaacacgtgcaatattacacatgttaaagtaattaaaagtagta 1377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 27756574 - 27756617
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttt 211  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||    
T  27756574 tgtgcaatattgcacatgttaaggaaactaaatgtagcaacttt 27756617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 41415703 - 41415656
Alignment:
Q  187 taaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||||||    
T  41415703 taaggcaactaaaagtagtaacttttaattgaaaatcaacaattattt 41415656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 41887752 - 41887681
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  41887752 ttatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 41887681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 9971744 - 9971710
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgtta 188  Q
    ||||||||||||| |||||||||||||||||||||    
T  9971744 gggtttgtctaacatgtgcaatattgcacatgtta 9971710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 32459327 - 32459397
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || |||||||| |||||||    
T  32459327 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaa 32459397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 42480112 - 42480022
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||| | || |||||||| | | ||||||||||||||| |||| | |||||| ||||| ||| |||| ||||||| || |||||||||    
T  42480112 attatttaaaggttttgtctagcatatgcaatattgcacatcttaaagcaactaagagtagcaacattttattgaaaaacatcaattattt 42480022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 53961350 - 53961400
Alignment:
Q  183 atgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    ||||||| ||||||||||||||||| ||||  ||||||| |||||||||||    
T  53961350 atgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattatt 53961400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 3728249 - 3728306
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttt 213  Q
    ||||||||||| ||| |||||||| ||||||||    |||||||||||||||||||||    
T  3728249 gtttgtctaacatgtacaatattgaacatgttataacaactaaaagtagtaacttttt 3728306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 40681961 - 40682014
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 221  Q
    |||||||||||||| ||||||||  |||||||| |||||| ||||| |||||||    
T  40681961 tgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaa 40682014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 48910947 - 48910902
Alignment:
Q  188 aaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||||||||||| ||||| |||||||  ||||||||||    
T  48910947 aaggtaactaaaagtagtaattttttattgaaaattaacaattatt 48910902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 51691343 - 51691419
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||  ||||||| |||||||||||||| | |||||||| |||||| | ||| |||||||| || ||||||||    
T  51691343 tttgtctaaaatgtgcaacattgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattattt 51691419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 53376603 - 53376558
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||| || |||||||||  ||||||||||||||||||||||    
T  53376603 attattttaaggatttgtctaagatgtgcaatattgcacatgttaa 53376558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 19838872 - 19838791
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||| |||||||||| |||| || ||||||||||||||   |||||| |||| ||||||||| || |||  ||||||||||||    
T  19838872 tatggatttgtctaacatgtggaacattgcacatgttaaaacaactaatagtaataactttttttttaaa--caacaattattt 19838791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 27362389 - 27362469
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||| |||||| |  |||| |||||| |||||||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  27362389 gggtttatctaacatacgcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttattt 27362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 13084 - 13160
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaatt 230  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  13084 gggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaatt 13160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 5692 - 5769
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-ctttttgttgaaaaccaacaattatt 233  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  5692 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattatt 5769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 37297 - 37214
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||| ||| | ||||||    
T  37297 tatgggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttattt 37214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 40974 - 41058
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| ||||||| ||||  |||||||||||||||  |||| | || ||||||||  |||||||| ||||||| ||||||| ||||    
T  40974 ttattggtttgtttaacacgtgcaatattgcacaacttaaagaaattaaaagtaacaacttttttttgaaaaacaacaatcattt 41058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 3572 - 3513
Alignment:
Q  175 tattgcacatgttaaggtaactaaaagtagtaacttttt-gttgaaaaccaacaattatt 233  Q
    ||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  3572 tattgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattatt 3513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 94200 - 94118
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    |||| |||||||||| | ||||| ||||||||||||||   ||||||||||||||| ||||| |||||||| || ||||||||    
T  94200 atggatttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattattt 94118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 13841 - 13758
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||| |||||| ||||||| ||||||||||||||   |||||| |||||||||||||| ||| ||| ||| | ||||||    
T  13841 tatgggtttttctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttattt 13758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 43479 - 43540
Alignment:
Q  171 gcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattatt 233  Q
    |||||||||||| ||||||||||| |||||||||||| ||||  ||||||| |||||||||||    
T  43479 gcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaattatt 43540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 193417 - 193376
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaag 190  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  193417 tttatgagtttgtctaacatgtgcaatattgcacatgttaag 193376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 16714 - 16634
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| | ||||| |||||| ||||||| |||||||||||  | |||| ||| ||| ||| ||||||||||||    
T  16714 gggtttgtctaacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattattt 16634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 443 - 492
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    ||||| |||| ||||||||||||||||||||||   ||||||||||||||    
T  443 tttgtttaacatgtgcaatattgcacatgttaaatcaactaaaagtagta 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 31880 - 31800
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattt 234  Q
    ||||||||||||| ||||||| |||||||||||||  | ||||||||   | ||| |||| ||||||| ||| ||||||||    
T  31880 gggtttgtctaacatgtgcaacattgcacatgttagagcaactaaaatgggaaaccttttattgaaaaacaaaaattattt 31800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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