View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12941_low_9 (Length: 349)
Name: NF12941_low_9
Description: NF12941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12941_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 288
Target Start/End: Original strand, 36965189 - 36965474
Alignment:
| Q |
13 |
aatatgtcatcaaaggaaacaactaaactaaatcatgtcttccttcattctttacctctcat---aattgcctaactagaccaaatcttttgatctaatg |
109 |
Q |
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| T |
36965189 |
aatatgtcatcaaaggaaacaactaaactaaatcatgtcttccttctttctttacctctcatcataattgcctaactagaccaaatcttttgatctaatg |
36965288 |
T |
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| Q |
110 |
caatgcaacccatatcttctgtcaaataccattttctccccatttacccgacattttcctttgttatgttgt-------gtctttaccacctcacattct |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36965289 |
caatgcaacccatatcttctgtcaaataccattttctccccatttacccgacattttcctttgttatgttgtgtctttagtctttaccacctcacattct |
36965388 |
T |
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| Q |
203 |
acaaggtaaaaacgccatattttttaacgccgtgtgtatacttgcttgtgagttatgatctcatttccctgatcaagggacacatt |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36965389 |
acaaggtaaaaacgccatattttttaacgccgtgtgtatacttgcttgtgagttatgatctcatttccctgatcaagggacacatt |
36965474 |
T |
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