View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12942_low_2 (Length: 886)

Name: NF12942_low_2
Description: NF12942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12942_low_2
NF12942_low_2
[»] chr5 (27 HSPs)
chr5 (1-867)||(35122232-35123099)
chr5 (1-864)||(30509573-30510435)
chr5 (1-864)||(30549913-30550775)
chr5 (1-413)||(19512991-19513403)
chr5 (1-413)||(38357669-38358081)
chr5 (1-91)||(6866888-6866978)
chr5 (16-245)||(6049591-6049820)
chr5 (16-351)||(20208261-20208595)
chr5 (16-102)||(7000328-7000407)
chr5 (307-413)||(4400079-4400185)
chr5 (13-91)||(22094788-22094866)
chr5 (307-419)||(587712-587824)
chr5 (297-413)||(11817992-11818108)
chr5 (153-420)||(10486598-10486865)
chr5 (221-351)||(4415446-4415576)
chr5 (218-320)||(6866682-6866784)
chr5 (769-812)||(19182127-19182170)
chr5 (709-816)||(13836533-13836636)
chr5 (520-608)||(4399884-4399972)
chr5 (712-816)||(6866251-6866355)
chr5 (776-812)||(11817593-11817629)
chr5 (43-82)||(380434-380473)
chr5 (745-816)||(29094777-29094848)
chr5 (13-91)||(10486458-10486536)
chr5 (49-90)||(31642036-31642077)
chr5 (49-90)||(33170183-33170224)
chr5 (43-84)||(34338415-34338456)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-866)||(16894-17759)
[»] chr6 (32 HSPs)
chr6 (1-867)||(33804528-33805394)
chr6 (305-864)||(4474448-4475008)
chr6 (1-309)||(4478294-4478605)
chr6 (1-351)||(23065572-23065923)
chr6 (1-398)||(13085756-13086153)
chr6 (16-351)||(11060403-11060738)
chr6 (5-351)||(18050979-18051325)
chr6 (1-208)||(11468976-11469182)
chr6 (16-102)||(17078731-17078817)
chr6 (1-366)||(21549097-21549462)
chr6 (13-102)||(503070-503159)
chr6 (13-102)||(19256153-19256242)
chr6 (79-366)||(9565616-9565903)
chr6 (16-396)||(649614-649987)
chr6 (13-102)||(33640431-33640519)
chr6 (15-102)||(8264736-8264823)
chr6 (13-102)||(5085564-5085653)
chr6 (43-90)||(10362658-10362705)
chr6 (769-816)||(26010671-26010718)
chr6 (769-812)||(6004771-6004814)
chr6 (769-816)||(24378576-24378623)
chr6 (16-91)||(17873367-17873435)
chr6 (49-90)||(18682148-18682189)
chr6 (13-69)||(23347005-23347061)
chr6 (43-91)||(32186207-32186255)
chr6 (769-812)||(6008301-6008344)
chr6 (769-816)||(21548647-21548694)
chr6 (238-380)||(24379012-24379154)
chr6 (315-413)||(25318056-25318154)
chr6 (315-413)||(26205550-26205648)
chr6 (49-90)||(14372565-14372606)
chr6 (156-393)||(17873500-17873736)
[»] chr1 (23 HSPs)
chr1 (246-867)||(16873263-16873885)
chr1 (1-186)||(39430706-39430891)
chr1 (12-190)||(49264501-49264679)
chr1 (45-190)||(20796093-20796238)
chr1 (1-413)||(34853174-34853579)
chr1 (16-327)||(26720921-26721232)
chr1 (1-91)||(28097492-28097581)
chr1 (52-190)||(17827725-17827863)
chr1 (13-91)||(25504532-25504610)
chr1 (16-351)||(30110466-30110801)
chr1 (303-470)||(20795813-20795980)
chr1 (745-867)||(44929982-44930105)
chr1 (734-867)||(44415259-44415393)
chr1 (16-56)||(10710738-10710778)
chr1 (309-480)||(30970442-30970613)
chr1 (746-817)||(34853911-34853982)
chr1 (221-351)||(17708243-17708373)
chr1 (172-245)||(21528535-21528608)
chr1 (153-218)||(36306181-36306246)
chr1 (1-69)||(48072957-48073025)
chr1 (13-51)||(7396260-7396298)
chr1 (315-413)||(48265558-48265656)
chr1 (314-347)||(10150620-10150653)
[»] chr7 (30 HSPs)
chr7 (1-536)||(17855815-17856343)
chr7 (410-867)||(43571900-43572358)
chr7 (1-413)||(18671372-18671784)
chr7 (1-413)||(18767610-18768022)
chr7 (1-190)||(13553710-13553899)
chr7 (1-413)||(34457684-34458096)
chr7 (731-867)||(37724142-37724278)
chr7 (56-413)||(19728689-19729043)
chr7 (13-350)||(4077540-4077870)
chr7 (121-398)||(31025149-31025426)
chr7 (13-102)||(45993089-45993177)
chr7 (11-86)||(36227686-36227761)
chr7 (4-107)||(5327270-5327374)
chr7 (4-203)||(34232111-34232303)
chr7 (131-190)||(47105266-47105325)
chr7 (808-867)||(5020905-5020965)
chr7 (1-206)||(41339934-41340147)
chr7 (13-91)||(33795895-33795973)
chr7 (297-413)||(8771636-8771752)
chr7 (1-69)||(13440599-13440667)
chr7 (769-812)||(8771237-8771280)
chr7 (173-420)||(15653403-15653650)
chr7 (769-816)||(41801253-41801300)
chr7 (712-815)||(42431125-42431228)
chr7 (770-816)||(34458453-34458499)
chr7 (776-812)||(18767211-18767247)
chr7 (166-218)||(46624090-46624142)
chr7 (308-426)||(45943040-45943158)
chr7 (43-84)||(11341327-11341368)
chr7 (521-606)||(13554224-13554309)
[»] chr3 (31 HSPs)
chr3 (605-865)||(9163259-9163520)
chr3 (12-189)||(21740060-21740237)
chr3 (2-413)||(45684378-45684789)
chr3 (1-333)||(36709192-36709524)
chr3 (1-365)||(42674965-42675328)
chr3 (19-170)||(14864009-14864160)
chr3 (1-380)||(15481284-15481662)
chr3 (16-351)||(47537532-47537867)
chr3 (773-867)||(19824093-19824188)
chr3 (4-351)||(48192063-48192409)
chr3 (43-688)||(54439682-54440326)
chr3 (1-206)||(24926214-24926419)
chr3 (241-413)||(18368721-18368893)
chr3 (13-91)||(50544748-50544825)
chr3 (1-61)||(18366108-18366168)
chr3 (13-467)||(46908208-46908661)
chr3 (229-350)||(8943617-8943734)
chr3 (769-816)||(42675732-42675779)
chr3 (709-812)||(45683979-45684082)
chr3 (307-413)||(14867617-14867723)
chr3 (4-91)||(43121203-43121283)
chr3 (156-351)||(26846131-26846326)
chr3 (769-816)||(18369249-18369296)
chr3 (769-812)||(20822791-20822834)
chr3 (43-86)||(52250692-52250735)
chr3 (236-426)||(26010236-26010426)
chr3 (49-90)||(16179472-16179513)
chr3 (13-69)||(6176016-6176072)
chr3 (712-812)||(15484020-15484120)
chr3 (19-91)||(23819095-23819160)
chr3 (43-84)||(8130482-8130523)
[»] chr2 (27 HSPs)
chr2 (1-413)||(35488039-35488451)
chr2 (1-190)||(9668532-9668721)
chr2 (2-413)||(28400077-28400488)
chr2 (13-102)||(15018190-15018279)
chr2 (16-351)||(1380346-1380681)
chr2 (3-409)||(16213391-16213790)
chr2 (45-190)||(11234049-11234194)
chr2 (238-413)||(8065989-8066164)
chr2 (13-84)||(11028401-11028472)
chr2 (17-104)||(22724981-22725068)
chr2 (1-262)||(36804480-36804733)
chr2 (709-816)||(8066460-8066567)
chr2 (709-812)||(28400784-28400887)
chr2 (769-812)||(16212988-16213031)
chr2 (769-812)||(37643301-37643344)
chr2 (43-86)||(43310788-43310831)
chr2 (14-102)||(25380933-25381014)
chr2 (521-585)||(9669052-9669116)
chr2 (13-69)||(26894150-26894206)
chr2 (13-69)||(26899589-26899645)
chr2 (43-86)||(26146744-26146787)
chr2 (523-581)||(8066274-8066332)
chr2 (148-190)||(10598132-10598174)
chr2 (358-416)||(11028069-11028127)
chr2 (44-90)||(37445618-37445664)
chr2 (297-426)||(13550313-13550442)
chr2 (49-90)||(28253245-28253286)
[»] chr4 (40 HSPs)
chr4 (1-405)||(4524153-4524555)
chr4 (45-403)||(42953064-42953422)
chr4 (5-332)||(26694211-26694538)
chr4 (16-351)||(42778502-42778837)
chr4 (13-102)||(19114949-19115038)
chr4 (16-102)||(10562874-10562960)
chr4 (18-102)||(20396095-20396179)
chr4 (1-82)||(53810374-53810455)
chr4 (13-102)||(8935587-8935676)
chr4 (218-405)||(4640422-4640609)
chr4 (4-71)||(34975079-34975146)
chr4 (13-91)||(13158324-13158401)
chr4 (13-91)||(23657821-23657899)
chr4 (43-91)||(49925835-49925883)
chr4 (4-102)||(53486472-53486563)
chr4 (792-867)||(20669233-20669309)
chr4 (156-351)||(34322000-34322195)
chr4 (235-340)||(13158536-13158638)
chr4 (51-102)||(19648222-19648273)
chr4 (709-812)||(46639224-46639327)
chr4 (159-350)||(53810106-53810297)
chr4 (1-69)||(23873002-23873070)
chr4 (1-69)||(55299158-55299226)
chr4 (153-420)||(8654751-8655018)
chr4 (769-816)||(26693726-26693773)
chr4 (13-91)||(29553278-29553356)
chr4 (49-90)||(5789666-5789707)
chr4 (712-817)||(53809639-53809744)
chr4 (58-90)||(1828123-1828155)
chr4 (518-618)||(4640722-4640821)
chr4 (58-90)||(19735318-19735350)
chr4 (520-615)||(9992883-9992978)
chr4 (520-615)||(42953539-42953634)
chr4 (156-219)||(47541321-47541384)
chr4 (343-405)||(9992706-9992768)
chr4 (114-219)||(3129621-3129726)
chr4 (772-817)||(4640975-4641020)
chr4 (512-593)||(8655110-8655191)
chr4 (42-90)||(29328344-29328393)
chr4 (49-90)||(55725280-55725321)
[»] chr8 (23 HSPs)
chr8 (1-413)||(44082538-44082950)
chr8 (1-189)||(11393874-11394062)
chr8 (16-351)||(17659095-17659430)
chr8 (1-425)||(12134518-12134941)
chr8 (45-189)||(24794183-24794327)
chr8 (313-853)||(7555208-7555749)
chr8 (1-107)||(6901417-6901523)
chr8 (13-91)||(36157678-36157755)
chr8 (1-66)||(23942636-23942701)
chr8 (153-420)||(7452547-7452814)
chr8 (13-102)||(4987603-4987692)
chr8 (745-865)||(27083364-27083485)
chr8 (307-413)||(11394180-11394286)
chr8 (316-413)||(24793953-24794050)
chr8 (67-263)||(7555817-7556005)
chr8 (709-816)||(40467625-40467732)
chr8 (709-816)||(23942116-23942223)
chr8 (153-398)||(43253403-43253648)
chr8 (215-438)||(23680339-23680562)
chr8 (45-151)||(43249363-43249468)
chr8 (767-811)||(30501772-30501816)
chr8 (523-581)||(23942351-23942409)
chr8 (358-440)||(36157332-36157414)
[»] scaffold0912 (1 HSPs)
scaffold0912 (16-345)||(2414-2743)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-102)||(182628-182712)
[»] scaffold0179 (2 HSPs)
scaffold0179 (16-351)||(7792-8131)
scaffold0179 (16-91)||(12990-13065)
[»] scaffold0112 (1 HSPs)
scaffold0112 (1-380)||(15177-15555)
[»] scaffold0006 (1 HSPs)
scaffold0006 (238-366)||(42387-42515)
[»] scaffold0029 (2 HSPs)
scaffold0029 (130-390)||(134509-134769)
scaffold0029 (13-91)||(134392-134470)
[»] scaffold0002 (4 HSPs)
scaffold0002 (130-390)||(312336-312596)
scaffold0002 (130-390)||(327790-328050)
scaffold0002 (13-91)||(312219-312297)
scaffold0002 (13-91)||(327673-327751)
[»] scaffold0131 (1 HSPs)
scaffold0131 (166-245)||(4240-4319)
[»] scaffold0026 (1 HSPs)
scaffold0026 (43-89)||(67606-67652)


Alignment Details
Target: chr5 (Bit Score: 716; Significance: 0; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 716; E-Value: 0
Query Start/End: Original strand, 1 - 867
Target Start/End: Original strand, 35122232 - 35123099
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  35122232 ttgtggtatcaggttttagtcgcccgttatggcgaaataggtggaaggttggaggtggggggccagagttgttcttcttggtggcgggaggtagggagga 35122331  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    ||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35122332 tttgtgagggtgttggtgatgtagggggtggttggtttggggatagtgtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 35122431  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||    
T  35122432 gtttgatgatgttccttttagtgagcggtttcgtaggttgtttgacttagctgagaacaaaaccatttctgtggcgaatatgttctctcttgacctggag 35122531  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  35122532 cagggaggggttgggtggaggtggagacgtaggttgtgggcttgggaggagactttattagaggagcttagggctttactgcttgatgtttctttgttgt 35122631  T
Q  401 ctaatgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgt 500  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |    
T  35122632 ctaatgtttcagacagatggttgtggttacctgaccctttgggaggttatgctgttcgaggagcttatgatcttttaacagagggtgccaatcctctttt 35122731  T
Q  501 agacgacgctttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaat 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35122732 agacgacgctttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaat 35122831  T
Q  601 ttagcagctcgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaatt 700  Q
    || ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35122832 ttggcagctcgtggtgttcttcattcagaggcgactctttgtgatacaggatgcggtcatgttgaaacagccgaacatttgtttttattttgcccaaatt 35122931  T
Q  701 ctgttttattgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcagg 800  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  35122932 ctgttttattgtggcagcaggtgcgaaattggctaggttttatgggggtggattttaataatcttcctgatcatttggtgcagtttacttatttggcagg 35123031  T
Q  801 tgttggtaaagctaaacattcctttctaca-gtaatctggattctttgtacttggattgtgtggaacg 867  Q
    ||||||||||||||||| ||||||| ||||  ||||||||||||| ||||||||||||||||||||||    
T  35123032 tgttggtaaagctaaacgttcctttttacatctaatctggattctatgtacttggattgtgtggaacg 35123099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 1 - 864
Target Start/End: Original strand, 30509573 - 30510435
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||| |||||||||||||||||||||||  | || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30509573 ttgtggtatcaggttttagtcgcccgttatggcgagatcggtgggagattggaggtggggggccggagttgttcttcttggtggcgggaggtagggagga 30509672  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    | ||||| || |  || | ||||||||| | |||||| ||   ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30509673 tctgtgagggtgggggcggtgtagggggtgattggttcggcagtagtgtgattaggaaggtgggggatggtgctgatacgttgttctggtctcataggtg 30509772  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    || |||||||  ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||||  ||| |    
T  30509773 gtgtggtgatcgtccttttagtgagcggtttggcaggttgtttgacttagctgagaacaaagccatttcagtggcttctatgttctctcttggcgtggtg 30509872  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||| ||||| |||||||| |||||||| || ||||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30509873 caggg-gggga-gggtggagttggaggcgaagattgtgggcttgggaggaatttttattagaggagcttagggctttactgcttgatgtttctttgttgc 30509970  T
Q  401 ctaatgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgt 500  Q
    ||||||||||||| |||||||||||| |||||||||||  ||| |||||| |||||||||||||||||| | | |||| |||||  ||  ||| |||| |    
T  30509971 ctaatgtttcagatagatggttgtggctacctgaccctgtggggggttatactgttcgaggagcttatgttatattaatagagggcgctcatcctctttt 30510070  T
Q  501 agacgacgctttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaat 600  Q
       ||| ||  |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  30510071 gaccgaagcaatggatctagtttggcatcgtcaggtccccttaaaggtctcgatttttgcttggagacttctccgggatcggttaccttcaaaagcaaat 30510170  T
Q  601 ttagcagctcgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaatt 700  Q
    || |||||||||||||||||   ||| ||| |||| ||||||| |   || || ||||||||||| || ||||||||||| ||||||||||||||||||     
T  30510171 ttggcagctcgtggtgttctcagttctgaggcgactctttgtgttatgggctgtggtcatgttgaaacggccgaacatttatttttattttgcccaaata 30510270  T
Q  701 ctgttttattgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcagg 800  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||| || |||||||||||||| | | ||||    
T  30510271 ctgttttgttgtggcagcaggtgcgcaattggctaggttctatgggggcggatccgaataatcttcatgatcacttagtgcagtttacttactcgacagg 30510370  T
Q  801 tgttggtaaagctaaacattcctttctacag-taatctggattctttgtacttggattgtgtgga 864  Q
    ||||||||||||||||| ||| ||||| ||| |||| |||||||| |||||||||||||||||||    
T  30510371 tgttggtaaagctaaacgttcttttctgcagctaatttggattctgtgtacttggattgtgtgga 30510435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 1 - 864
Target Start/End: Original strand, 30549913 - 30550775
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||| |||||||||||||||||||||||  | || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30549913 ttgtggtatcaggttttagtcgcccgttatggcgagatcggtgggagattggaggtggggggccggagttgttcttcttggtggcgggaggtagggagga 30550012  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    | ||||| || |  || | ||||||||| | |||||| ||   ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30550013 tctgtgagggtgggggcggtgtagggggtgattggttcggcagtagtgtgattaggaaggtgggggatggtgctgatacgttgttctggtctcataggtg 30550112  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    || |||||||  ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||||  ||| |    
T  30550113 gtgtggtgatcgtccttttagtgagcggtttggcaggttgtttgacttagctgagaacaaagccatttcagtggcttctatgttctctcttggcgtggtg 30550212  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||| ||||| |||||||| |||||||| || ||||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30550213 caggg-gggga-gggtggagttggaggcgaagattgtgggcttgggaggaatttttattagaggagcttagggctttactgcttgatgtttctttgttgc 30550310  T
Q  401 ctaatgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgt 500  Q
    ||||||||||||| |||||||||||| |||||||||||  ||| |||||| |||||||||||||||||| | | |||| |||||  ||  ||| |||| |    
T  30550311 ctaatgtttcagatagatggttgtggctacctgaccctgtggggggttatactgttcgaggagcttatgttatattaatagagggcgctcatcctctttt 30550410  T
Q  501 agacgacgctttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaat 600  Q
       ||| ||  |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  30550411 gaccgaagcaatggatctagtttggcatcgtcaggtccccttaaaggtctcgatttttgcttggagacttctccgggatcggttaccttcaaaagcaaat 30550510  T
Q  601 ttagcagctcgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaatt 700  Q
    || |||||||||||||||||   ||| ||| |||| ||||||| |   || || ||||||||||| || ||||||||||| ||||||||||||||||||     
T  30550511 ttggcagctcgtggtgttctcagttctgaggcgactctttgtgttatgggctgtggtcatgttgaaacggccgaacatttatttttattttgcccaaata 30550610  T
Q  701 ctgttttattgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcagg 800  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||| || |||||||||||||| | | ||||    
T  30550611 ctgttttgttgtggcagcaggtgcgcaattggctaggttctatgggggcggatccgaataatcttcatgatcacttagtgcagtttacttactcgacagg 30550710  T
Q  801 tgttggtaaagctaaacattcctttctacag-taatctggattctttgtacttggattgtgtgga 864  Q
    ||||||||||||||||| ||| ||||| ||| |||| |||||||| |||||||||||||||||||    
T  30550711 tgttggtaaagctaaacgttcttttctgcagctaatttggattctgtgtacttggattgtgtgga 30550775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 19512991 - 19513403
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||  |||| | ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  19512991 ttgtggtatagtgttcttgtcgcccgttatggcgaggttggtgggaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggagga 19513090  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || | || || |  |||| |||||||||  |||||||||||||||| |||| |||||||||||| |||||   ||||||||||||||||   ||  |||     
T  19513091 ttcgagatggggagggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggcgatgggaatgatacgttgttttggcagcactggta 19513190  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttg-gtctgga 299  Q
    || ||| |  |  ||| |||| |||  ||||   ||||||||||| ||||||| |||||||   |||||||| || || ||||| || |||| |  ||      
T  19513191 gtgtggcggagcgcctcttagagagttgttttcgaggttgtttgatttagttgtgaacaaagatatttctgtagctaacatgttttc-cttgaggttgtt 19513289  T
Q  300 gcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttg 399  Q
    ||  || ||||| |||||||| |||||||| ||||||||||  |||||||||  |||| ||||||||  |||||| ||||||| |||| ||||||||||     
T  19513290 gcgaggtggggaggggtggagttggaggcggaggttgtgggcgtgggaggaggttttactagaggagtgtagggcattactgcttgatatttctttgttt 19513389  T
Q  400 cctaatgtttcaga 413  Q
    |||||| |||||||    
T  19513390 cctaatatttcaga 19513403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 38358081 - 38357669
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| |  ||||||||||||| ||| ||||    
T  38358081 ttgtggtatcagattttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttccttgtggtggcgggaggtaggtagga 38357982  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| |||||||||||   ||| || || ||||| ||||||||  |     ||| |||||| |||||| |    |||||||| ||||  ||||| ||    
T  38357981 ttcgtgatggcgttggtgacacaggtggagggtggttcggtgatagtattagacggagggtgggagatggtacgacgacgttgttctggttgcatagatg 38357882  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |  |||  || ||| ||||||||   | |||||||||||||  ||||| ||||||||| | |||||   | |||||||| | ||| |||||    
T  38357881 gattggaggtactccgctttgtgtgcggtttccccgcttgtttgacttagcagagaataaaaccattacggtggcctctttgttctctttgggtatggag 38357782  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||  ||||| |||||||||||||||||||| ||||||| ||||||||||  |||| ||||||||  |||||| |||||   |||| | | |||| | |    
T  38357781 caggatggggaggggtggaggtggaggcgtagtttgtgggcttgggaggagcttttactagaggagtgtagggcgttactatttgatatctgtttggttc 38357682  T
Q  401 ctaatgtttcaga 413  Q
    |||||||||||||    
T  38357681 ctaatgtttcaga 38357669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6866978 - 6866888
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  6866978 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccagagtggttcttcgtggtggcgggagg 6866888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 6049820 - 6049591
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    ||||||||||||||||| |||||||| ||||||||||||||  |||||| |||||||||||| |||||| |||||| |||| ||||| | || || |  |    
T  6049820 ttagtcgcccgttatggtgaagtaggtgggaggttggaggttaggggccagagttgttcttcctggtggagggaggtagggcggattagagatgggggag 6049721  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||| | | || || ||||||||||| ||  | ||| ||| |||| |  |||||||| ||||||| |||||||||| | ||| |||||||||    ||| |    
T  6049720 gtgttattggtggaggttggtttggggagtgtgtgtttaagaagttaagggatggttctgatactttgttttggtatgataagtggtttggatcagtttc 6049621  T
Q  216 ttttagtgagcggtttcgtaggttgtttga 245  Q
     ||| ||||| |||||| ||||||||||||    
T  6049620 gtttcgtgagaggtttcctaggttgtttga 6049591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 351
Target Start/End: Original strand, 20208261 - 20208595
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||| ||||||  |||  |||| | || || |  |    
T  20208261 ttagtcgcccgt-atggcgaagtaggtgggaggttggaggttgggggccggagttgttcgttttggtggagggaggtggggtagattagagatgggggag 20208359  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||||| | || || || |||||||| ||  | |||  || |||| | ||||||||| |  | || |||||||||| | ||| |||||| ||    ||| |    
T  20208360 gtgattttggtggtggctggtttggggagtgtgtgtctaagaagtttggggatggttcaaacactttgttttggtttgataagtggttagggtcggtttc 20208459  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggc-gaatatgttctctcttggtctggagcagggaggggatgg 314  Q
    |||  |||||||||||| ||||||||||||  | | |||||||||| | ||| | ||||| | || |||||||||||||| | |||||||| ||||| |     
T  20208460 tttgtgtgagcggtttcctaggttgtttgatcttgctgagaacaaatctattacggtggcaggat-tgttctctcttggtgttgagcagggtggggaggc 20208558  T
Q  315 gtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    ||||||||||||| | ||||||||||  |||||||||    
T  20208559 gtggaggtggaggaggaggttgtgggcatgggaggag 20208595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 7000328 - 7000407
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    |||||||||||||||||||||||||| ||||||||||       ||||| ||||||||||||||||||| |||||| ||||||||||    
T  7000328 ttagtcgcccgttatggcgaagtaggtgggaggttgg-------gggccagagttgttcttcttggtggagggaggtagggaggatt 7000407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 307 - 413
Target Start/End: Complemental strand, 4400185 - 4400079
Alignment:
Q  307 ggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatg 406  Q
    ||||| |||||||| |||||||| ||||||||    |||||||||  |||||||||||||  |||||  ||||||| ||||||||||||||| ||||||     
T  4400185 ggggaggggtggagttggaggcggaggttgtgaacgtgggaggagggtttattagaggagtgtagggtcttactgcttgatgtttctttgtttcctaata 4400086  T
Q  407 tttcaga 413  Q
    |||||||    
T  4400085 tttcaga 4400079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 22094788 - 22094866
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||||| ||||||||||| ||  | |||||||||||||  |||||||| ||||||||||| |||||||||||||    
T  22094788 gttttagtcgctcgttatggcgaggtttgtgggaggttggaggatgggggccgaagttgttcttcgtggtggcgggagg 22094866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 307 - 419
Target Start/End: Complemental strand, 587824 - 587712
Alignment:
Q  307 ggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatg 406  Q
    |||||||  |||||||||||||||||| | |||   |||||||||  | | |||||||||  |||||||||||| | ||||||||||||||  |||||||    
T  587824 ggggatgtctggaggtggaggcgtaggctatggatgtgggaggaggatatgttagaggagtgtagggctttacttcttgatgtttctttgtatcctaatg 587725  T
Q  407 tttcagacagatg 419  Q
    ||||||| |||||    
T  587724 tttcagatagatg 587712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 297 - 413
Target Start/End: Complemental strand, 11818108 - 11817992
Alignment:
Q  297 ggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttg 396  Q
    ||||||||  ||||| |||||||||||||||||||| |||| || ||||||||||  |||| ||||||||  |||||| |||||   |||| | ||||||    
T  11818108 ggagcaggatggggaggggtggaggtggaggcgtagattgtaggcttgggaggagcttttactagaggagtgtagggcgttactatttgatatctctttg 11818009  T
Q  397 ttgcctaatgtttcaga 413  Q
     | ||||||||||||||    
T  11818008 gttcctaatgtttcaga 11817992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 420
Target Start/End: Original strand, 10486598 - 10486865
Alignment:
Q  153 taggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagtt 252  Q
    ||||| ||| || ||||| |||||||||||||||||||   |||||||||| || ||| |||||||| |||  || ||||||||| ||||||| |||       
T  10486598 taggagggttggagatggagctgatacgttgttttggttggataggtggttaggggatcttcctttttgtgtccgttttcgtaggctgtttgagttaaca 10486697  T
Q  253 gagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggaga 352  Q
     |||| ||   ||| ||||||||  |  |||||||| ||| |  ||||||| | |||| |  |||||||||||| |||||||||||| | |||||||||     
T  10486698 tagaataagttcatgtctgtggcagacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggagg 10486797  T
Q  353 ctttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacagatgg 420  Q
       | |||| ||||  |||||||||||| | |||||||   ||||| || ||||||||||| ||||||    
T  10486798 acatgttagcggagtgtagggctttacttcttgatgttctcttgtttccgaatgtttcagatagatgg 10486865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 221 - 351
Target Start/End: Original strand, 4415446 - 4415576
Alignment:
Q  221 gtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggag 320  Q
    |||||||||||| ||||||||| ||  | |||||||||||| ||||| | |||||  |  |||||||||||||| | |||| ||| ||||| | |||||     
T  4415446 gtgagcggtttcctaggttgttcgatcttgttgagaacaaatccattacggtggcagacttgttctctcttggtgttgagcggggtggggaggcgtggaa 4415545  T
Q  321 gtggaggcgtaggttgtgggattgggaggag 351  Q
    ||||||| | ||||||||||  |||||||||    
T  4415546 gtggaggaggaggttgtgggcctgggaggag 4415576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 6866784 - 6866682
Alignment:
Q  218 ttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtg 317  Q
    |||||| |||||||| | | ||||||||||||  |||||||||||||||| | ||||| | | |||||||| | ||||||||| |||| ||||| |||||    
T  6866784 ttagtgtgcggtttcctcgtttgtttgacttatctgagaacaaaaccattacagtggccactttgttctctatgggtctggagtagggtggggaggggtg 6866685  T
Q  318 gag 320  Q
    |||    
T  6866684 gag 6866682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 812
Target Start/End: Original strand, 19182127 - 19182170
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  19182127 gatcatctggtgcagtttactcatttggcaggtgttggtaaagc 19182170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 709 - 816
Target Start/End: Original strand, 13836533 - 13836636
Alignment:
Q  709 ttgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggta 808  Q
    |||||||| |||||||||| |||| | |||||| | ||||||||  |||||| | || | ||||||||||||||||||||| |     ||||||||||||    
T  13836533 ttgtggcaacaggtgcgcagttggattggttttcttggggtggactctaatattattgcagatcatttggtgcagtttactca----ccaggtgttggta 13836628  T
Q  809 aagctaaa 816  Q
    ||||||||    
T  13836629 aagctaaa 13836636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 608
Target Start/End: Complemental strand, 4399972 - 4399884
Alignment:
Q  520 gtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagc 608  Q
    ||||||||||||||||| || |||||| | | ||| ||||||||||| ||  || ||||||||||||| || | ||||||||| |||||    
T  4399972 gtttggcatcatcaggttcctttgaagatattgatctttgcttggagtctcattagggatcggttaccgacgagagcaaatttggcagc 4399884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 816
Target Start/End: Complemental strand, 6866355 - 6866251
Alignment:
Q  712 tggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaag 811  Q
    ||||||||||||||| | ||| | |||||| | || |||||  |||||| | || |  |||||||||||||||||||| || || |||||||||| ||||    
T  6866355 tggcagcaggtgcgcgaatggattggttttcttggagtggactctaatattattgcatatcatttggtgcagtttactcatatgacaggtgttggcaaag 6866256  T
Q  812 ctaaa 816  Q
    |||||    
T  6866255 ctaaa 6866251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 812
Target Start/End: Complemental strand, 11817629 - 11817593
Alignment:
Q  776 tggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||||||||||| ||||||||||||||||||||||    
T  11817629 tggtgcagtttactcatttggcaggtgttggtaaagc 11817593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 380473 - 380434
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggt 82  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  380473 gggaggttggaggttgggggccggagtggttcttcttggt 380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 745 - 816
Target Start/End: Original strand, 29094777 - 29094848
Alignment:
Q  745 ggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    ||||||||  |||||| |||| | ||||| |||||||||||||||  |||| |||||||||| |||||||||    
T  29094777 ggggtggactctaatattcttgcagatcacttggtgcagtttactcttttgacaggtgttggaaaagctaaa 29094848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 10486458 - 10486536
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||| ||| | ||||||||| |||| || ||||||||||| ||||||||||||  ||| | ||||||| ||||||    
T  10486458 gttttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggagg 10486536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 31642077 - 31642036
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  |||||||||||||||||||| ||||||||||||    
T  31642077 ttggaggatgggggccggagttgttcttcatggtggcgggag 31642036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 33170224 - 33170183
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  ||||||||||||||||| |||||||||||||||    
T  33170224 ttggaggatgggggccggagttgttcatcttggtggcgggag 33170183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 34338456 - 34338415
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtgg 84  Q
    |||||||||||||| ||||||||||||  |||||||||||||    
T  34338456 gggaggttggaggttgggggccggagtgtttcttcttggtgg 34338415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 627; Significance: 0; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 627; E-Value: 0
Query Start/End: Original strand, 1 - 866
Target Start/End: Complemental strand, 17759 - 16894
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  17759 ttgtggtatcatgttttagtcgcccgttatggcgaaataggtgggaggttggaggtggggagctggagttgttcttcttggtggcgggaggtagggagga 17660  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    ||||||| || ||||| ||||||||||| ||| ||||||  ||||| ||| | |||||||||||| |||||| |||||||||||||||||||||||||||    
T  17659 tttgtgagggtgttggcgatgtagggggtggtaggtttgtcgatagtgtgttaaggaaggtgggg-atggtgttgatacgttgttttggtctcataggtg 17561  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  17560 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgactttgctaagaacaaaaccatttcggtgccgaatatgttctctcttggcctggag 17461  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    || |||||||| |||||||| ||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  17460 caaggaggggaagggtggagatggagacgtaggttgtgggctggggaggagaatttattagaggagcttagggctttactgctggatgtttctttgttgc 17361  T
Q  401 ctaatgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| |||| |    
T  17360 ctaatgtttcagacagatggttgtggttacctgacccttcggggggttatgctgtccgaggagcttatgatcttttaacagagggtgccaatcctcttat 17261  T
Q  501 agacgacgctttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaat 600  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  17260 agaagacgctttggacctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcgtttacctacaaaagcaaat 17161  T
Q  601 ttagcagctcgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaatt 700  Q
    || |||||||||||||||||| |||||||| |||| ||||||||| || |||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  17160 ttggcagctcgtggtgttcttaattcagaggcgactctttgtgatacaagatgtggtcatgttgaaacagccgaacatttatttttattttgcccaaatt 17061  T
Q  701 ctgttttattgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcagg 800  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  17060 ctgttttattgtggcagcaggtgcgcaattggctaggttctatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttgatagg 16961  T
Q  801 tgttggtaaagctaaacattcctttctac-agtaatctggattctttgtacttggattgtgtggaac 866  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||||||    
T  16960 tgttggtaaagctaaacgttcctttctacaactaatctggattatgtgtacttggattgtgtggaac 16894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 588; Significance: 0; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 588; E-Value: 0
Query Start/End: Original strand, 1 - 867
Target Start/End: Complemental strand, 33805394 - 33804528
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33805394 ttgtggtatcatgttttagtcgcccgctatggcgaaataggtgggaggttggaggtggggggccggagttgttcttcttggtggcgggaggtagggagga 33805295  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    ||||||| || ||||| ||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33805294 tttgtgagggtgttggcgatgtagggggtggttggtttgccgatagtgtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 33805195  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    ||| |||||||||| ||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| || |||    
T  33805194 gttgggtgatgttcattttagtgagcagtttcatagattgtttgacttagctgagaacaaaaccattttggtggcgaatatgttctctcttggactagag 33805095  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||||||||| |||||||| || || ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  33805094 cagggaggggaagggtggagttg-agacgtaggttgtgggcttgggaggagaatttattagaggagcttagggctttactgcttgatgtttctttgttgc 33804996  T
Q  401 ctaatgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgt 500  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||| ||| |  ||| | |||| |    
T  33804995 ctaatgtttcagatagatggttgtggttacctgacccttcggggggttatgcagtctgaggagcttatgatcttttaacaaagggtaacaaccctcttat 33804896  T
Q  501 agacgacgctttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaat 600  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  33804895 agacgacgctttggagctagtttggcatcatcaggttcccttgaaggtctcaatttttgcttggagacttcttcgggatcggttacctacaagagcaaat 33804796  T
Q  601 ttagcagctcgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaatt 700  Q
    || ||||||| |||||||||| |||| |||||||| ||||||||| ||||||||||||||||||| | ||||||||| || |||||||||||||||||||    
T  33804795 ttggcagctcatggtgttcttaattccgagacgactctttgtgatacaggatgcggtcatgttgaaatagccgaacacttatttttattttgcccaaatt 33804696  T
Q  701 ctgttttattgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcagg 800  Q
    |||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  33804695 ctgtattgttgtggcagcaggtgcgcaattggctaagttctatgggggtggatcctaataatcttcctgatcatttggtgcagcttacttatttgacagg 33804596  T
Q  801 tgttggtaaagctaaacattcctttctacag-taatctggattctttgtacttggattgtgtggaacg 867  Q
    ||||||||||||||||  ||||||||| ||| || |||||||| | |||||||||||||||| |||||    
T  33804595 tgttggtaaagctaaatgttcctttctgcagctagtctggattatgtgtacttggattgtgtagaacg 33804528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 305 - 864
Target Start/End: Complemental strand, 4475008 - 4474448
Alignment:
Q  305 gaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaa 404  Q
    ||||||| |||||||||||||| |||||||||||||  |||||||||| ||||||||||||| ||||| ||||| ||| | ||||||||||| |||||||    
T  4475008 gaggggaagggtggaggtggagacgtaggttgtgggcgtgggaggagaatttattagaggagtttaggactttattgcttaatgtttctttgctgcctaa 4474909  T
Q  405 tgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgtagac 504  Q
    |||||||||||||||| |||||||| ||||||||  ||| |||||| ||||||||||||| |||||||||||||| ||||||| ||||| ||   | ||     
T  4474908 tgtttcagacagatgggtgtggttatctgaccctgtggggggttatactgttcgaggagcctatgatcttttaactgaggatgtcaatcctcccatggat 4474809  T
Q  505 gacgctttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttag 604  Q
    || |  | ||  ||||||| |||||||||||| || |||||||| || |||||||||||| | ||||||||  ||| ||| || || |||||||| || |    
T  4474808 gatgtatcggttctagtttagcatcatcaggttccgttgaaggtatcaatttttgcttggcggcttcttcgaaatcagttgcctacgaaagcaaactttg 4474709  T
Q  605 cagctcgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaattctgt 704  Q
    |||| |||||||||||  |||| ||| | || ||||||| | |||| |||||||||||||| || || || ||||||||||||  |||||||||| || |    
T  4474708 cagcccgtggtgttctaaattccgaggcaactctttgtggtacaggttgcggtcatgttgaaaccgctgatcatttgtttttacattgcccaaatactat 4474609  T
Q  705 tttattgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgtt 804  Q
     || |||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||| |||||||||||||| |||||||| ||||| ||    
T  4474608 cttgttgtggcagcaggtgcgcaattggttaggttgtatgggggtggatcccaataatctttccgataatttggtgcagttttcttatttgacaggtttt 4474509  T
Q  805 ggtaaagctaaacattcctttctacag-taatctggattctttgtacttggattgtgtgga 864  Q
    ||||||||||||| ||||||| | ||| | |||||| |||||||||||||| | |||||||    
T  4474508 ggtaaagctaaacgttcctttatgcagctcatctggcttctttgtacttgggtcgtgtgga 4474448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 4478605 - 4478294
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtg---gggggccggagttgttcttcttggtggcgggaggcaggga 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||| |||| || ||||||  ||||    
T  4478605 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtaattgggggccggagttgttcttattggcggagggaggttggga 4478506  T
Q  98 ggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcatag 197  Q
    ||||||| || || ||||| ||||||| ||| |||||||| || | ||| |||||||| ||||||||||||||||||||||| ||||||||||   ||||    
T  4478505 ggatttgcgagggtgttggcgatgtagagggtggttggttcggcggtagtgtgcttagaaaggtgggggatggtgctgatacattgttttggttgaatag 4478406  T
Q  198 gtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctg 297  Q
    |||| ||||||||| ||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||  |     
T  4478405 gtggcttggtgatgctccttttagtgagtggtttagtaggttgtttgccttagctgagaacaaaaccatttcggtggcaaatatgttctctcttggctta 4478306  T
Q  298 gagcagggaggg 309  Q
    ||||||||||||    
T  4478305 gagcagggaggg 4478294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 23065572 - 23065923
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||| ||||    
T  23065572 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtggttcttcgtggtggcaggaggtaggtagga 23065671  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| || | |||||| ||||| || || |||||||||||||| ||     ||| |||||| |||||||| |  ||  |||| ||||| ||||||||    
T  23065672 ttcgtgatggtgatggtgacgtaggtggtgggtggtttggtgatagtgttaggcggagggtgggtgatggtgcagcgactctgttctggtcgcataggtg 23065771  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||||| |  |||  | |||| ||| |||| | | |||||||||||  |||||||||||||||||   ||||| | | |||||||| | |||||||||    
T  23065772 gattggtggttctccgctcagtgtgcgatttcctcgtttgtttgacttgtttgagaacaaaaccattatagtggctactttgttctctttgggtctggag 23065871  T
Q  301 cagggagggga-tgggtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    ||||| |||||  |||||||| ||| ||||| |||||||||  |||||||||    
T  23065872 cagggtggggagggggtggagttggcggcgtcggttgtgggcgtgggaggag 23065923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 398
Target Start/End: Complemental strand, 13086153 - 13085756
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||  |||| ||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||    
T  13086153 ttgtggtatagtgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctttttggtggaaggaggtagggagga 13086054  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || | || || | |||||  | ||||||  |||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||||| |||| ||||    
T  13086053 ttagagatggtgatggtggagcagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggtactgatacgttgttttggtttcattggtg 13085954  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    || ||| |  |  ||| |||| |||| |||||  ||||||||||| |||| ||   |||||   |||||| |||| || ||||| ||| |  |  ||  |    
T  13085953 gtgtggaggggcgcctcttagagagctgtttcccaggttgtttgatttagctgtagacaaatatatttctatggctaacatgttgtctgtgagggtgacg 13085854  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgtt 398  Q
    |||||   ||| |||||||| |||||||| ||||||||||  |||||||||| | |  ||||||||  |||| ||||||||| |||||||||||||||    
T  13085853 cagggtatggaggggtggagttggaggcggaggttgtgggcgtgggaggagattgtcctagaggagtgtaggactttactgcttgatgtttctttgtt 13085756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 16 - 351
Target Start/End: Original strand, 11060403 - 11060738
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    ||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||| ||||| | || || |  |    
T  11060403 ttagttgcccgttatggcgaattaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggtagggcggattagggacggtggag 11060502  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||||  | || || || |||||||| ||  | |||  || |||| ||||||||||  | ||||| |||||||||| | |||||||||| |||   ||| |    
T  11060503 gtgacattggtggaggctggtttggggagtgtgtgtctatgaagttgggggatgggtcagatactttgttttggtttgataggtggttaggttcggtttc 11060602  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatggg 315  Q
    |||  ||||| |||||| ||||||||| ||  |   ||||||||||  |||| | |||||   | |||||||||||||| |||||| ||||||||| | |    
T  11060603 tttctgtgagaggtttcctaggttgttcgatctttctgagaacaaatacattacagtggcaggtctgttctctcttggtgtggagcggggaggggaggcg 11060702  T
Q  316 tggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    |||| ||||||| | |||||||||| ||||||||||    
T  11060703 tggaagtggaggaggaggttgtgggcttgggaggag 11060738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 5 - 351
Target Start/End: Original strand, 18050979 - 18051325
Alignment:
Q  5 ggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttg 104  Q
    ||||||| || |||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||| ||||| |    
T  18050979 ggtatcaagtcttagtcgccgattatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggtagggcggattag 18051078  T
Q  105 tgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggttt 204  Q
     || || |  ||||||   || || || |||||||| ||  | |||  || |||| ||||||||||| | || || |||||||||| | ||| ||||||     
T  18051079 agatgggggaggtgattatggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggttcagacactttgttttggtatgataagtggtta 18051178  T
Q  205 ggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagg 304  Q
    ||    ||  ||||| |||||||||||| ||||||||||||  |   |||||||||| ||||| | |||||   | |||||||||||||| | |||| ||    
T  18051179 ggatcggtctctttttgtgagcggtttcctaggttgtttgatctttctgagaacaaatccattacggtggcaggtttgttctctcttggtgttgagcggg 18051278  T
Q  305 gaggggatgggtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    | ||||| | ||||  ||||||| | |||||||||| ||||||||||    
T  18051279 gtggggaggcgtgggagtggaggaggaggttgtgggcttgggaggag 18051325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 11469182 - 11468976
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||| ||| ||||||||||| ||||| || ||||| |||||||||||||  |||||| |||||||||||||||||||| ||||||  |||||||    
T  11469182 ttgtggtatcgtgtgttagtcgcccgatatggtgacgtaggtgggaggttggaggaagggggc-ggagttgttcttcttggtggagggaggttgggagga 11469084  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || | || || | ||||||||| ||||   | ||||||||||| |  ||| | ||||||||||| |||||   ||||| |||||||||||||||||| ||    
T  11469083 ttcgagagggtggtggtgatgttggggataggtggtttggtgacaatgtggtgaggaaggtgggtgatgggaatgatatgttgttttggtctcatagatg 11468984  T
Q  201 gtttggtg 208  Q
    ||| ||||    
T  11468983 gttgggtg 11468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 17078731 - 17078817
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||| |||||    
T  17078731 ttagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggtagggcggatt 17078817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 366
Target Start/End: Complemental strand, 21549462 - 21549097
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||| |||||  |||||||||||||||||||||||||||  |||||||||||||||||||| ||||||  |||||  || |||||||||| ||| ||||    
T  21549462 ttgtgatatcagattttagtcgcccgttatggcgaagtagatgggaggttggaggtggggggtcggagtgtttctttgtgctggcgggaggtaggcagga 21549363  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    |   ||| || | ||||||  |||| ||||| ||||| |||||||| ||     ||| |||||| |||||| |||  || ||||| ||||| |||||||     
T  21549362 tacatgatggtgctggtgacttaggtggcgggtggttcggtgatagtgttagatggagggtgggtgatggttctgcgactttgttctggtcgcataggta 21549263  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |  ||| ||| ||| ||||||||   | |||||||||||||  ||||||||||||||| | || ||   | |||||||| | ||| |||||    
T  21549262 gcttggaggttctccgttttgtgtgcggtttccccgcttgtttgacttagcagagaacaaaaccattacagtagcctctttgttctctttgggtatggag 21549163  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggag 366  Q
    ||||  ||||| |||||||| |||||||||||  | ||||  |||||||||  |||| ||||||||    
T  21549162 caggagggggaggggtggagttggaggcgtagactttgggcgtgggaggagcttttactagaggag 21549097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 503070 - 503159
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||||| ||  | |||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||    
T  503070 gttttagtcgcccgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggaggtggggaggatt 503159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 19256242 - 19256153
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||||| ||  | |||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||    
T  19256242 gttttagtcgcccgttatggcgaggtgtgtgggaggttggaggttgggggccagagttgttcttcttggtggcgggaggtggggaggatt 19256153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 79 - 366
Target Start/End: Complemental strand, 9565903 - 9565616
Alignment:
Q  79 tggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgata 178  Q
    ||||||||||||| ||| |||||| |||| || | ||||||  |||| || || ||||| |||||||| ||     ||| |||||| |||||||  |  |    
T  9565903 tggtggcgggaggtaggtaggattcgtgatggtgatggtgacataggtggagggtggttcggtgatagtgttagacggagggtgggtgatggtgtcgcga 9565804  T
Q  179 cgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaa 278  Q
    | ||||||||||| ||||||||| |||||| |   ||  || ||| ||| |||  | |||| |||||||||| ||||||||||| |||| | |||||       
T  9565803 ctttgttttggtcgcataggtggattggtggttccccgctttgtgtgcgattttctcggttatttgacttagctgagaacaaaatcattacggtggcttc 9565704  T
Q  279 tatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggag 366  Q
    | |||||||| | |||||||||||||| ||||| |||||||| |||||||||||||||||||  ||||||||| ||||  ||||||||    
T  9565703 tttgttctctttgggtctggagcagggtggggaggggtggagttggaggcgtaggttgtgggcgtgggaggaggctttgctagaggag 9565616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 16 - 396
Target Start/End: Original strand, 649614 - 649987
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||||| |||||| |||| | ||| | || || |  |    
T  649614 ttagtcgcccgttatggcgaagtaggtgggaggttgg-------gggccggagttgttcttcttggtggagggaggtagggcgaattagagacgggggag 649706  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||||| |||| || ||||||||||| ||  | |||  || |||| |||||||||||   || || |||||||||| | ||| |||||| ||    ||| |    
T  649707 gtgatataggtggaggttggtttggggagtgtgtgtctaagaagttgggggatggtttagacactttgttttggtatgataagtggttaggatcggtttc 649806  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatggg 315  Q
    |||| |||||||||||| ||||||||| ||  |   |||||||||| ||||| |  ||||     |||| ||||||||| | |||| ||| ||||| | |    
T  649807 tttttgtgagcggtttcctaggttgttcgatctttctgagaacaaatccattacgatggcaggcttgttttctcttggtgtagagcggggtggggaggcg 649906  T
Q  316 tggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttg 396  Q
    |||| ||||||| | |||||||||| ||||||||||      |||||||||  |||||||||| ||  |||||||||||||    
T  649907 tggaagtggaggaggaggttgtgggcttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctttg 649987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 33640519 - 33640431
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||||| ||  | |||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||    
T  33640519 gttttagtcgcccgttatggcgaggtgtgtgggaggttggaggttgggg-ccggagttgttcttcttggtggcgggaggtggggaggatt 33640431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 8264823 - 8264736
Alignment:
Q  15 tttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    |||||||||| |||||||||| ||  | |||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||    
T  8264823 tttagtcgcctgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggaggtggggaggatt 8264736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 5085564 - 5085653
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||| | ||||||||||||||  | |||||||||||||  |||||||| |||||||||||||||||||||||||  |||||||||    
T  5085564 gttttagtcactcgttatggcgaagtctgtgggaggttggaggatgggggccgaagttgttcttcttggtggcgggaggtggggaggatt 5085653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 10362705 - 10362658
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10362705 gggaggttggaggtggggggccggagtggttcttcttggtggcgggag 10362658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 769 - 816
Target Start/End: Complemental strand, 26010718 - 26010671
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  26010718 gatcatctggtgcagtttactcatttggcaggtgttggtaaagctaaa 26010671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 812
Target Start/End: Complemental strand, 6004814 - 6004771
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  6004814 gatcatctggtgcagtttactcatttggcaggtgttggtaaagc 6004771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 816
Target Start/End: Complemental strand, 24378623 - 24378576
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||    
T  24378623 gatcatctggtgcagtttacacatttggcaggtgttggtaaagctaaa 24378576  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 17873367 - 17873435
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||| |||||||||||||||||| |||||||||||       || ||||||||||||||||||||| ||||||    
T  17873367 ttagtcgtccgttatggcgaagtaggtgggaggttgga-------gggcggagttgttcttcttggtggagggagg 17873435  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 18682148 - 18682189
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  18682148 ttggaggatgggggccggagttgttcttcttggtggcgggag 18682189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 23347005 - 23347061
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    |||||||||||| | ||||||||| |||| || ||||||||||| ||||||||||||    
T  23347005 gttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagt 23347061  T

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Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 32186255 - 32186207
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||||||||| ||||||||||||  ||||||||||||| ||||||    
T  32186255 gggaggttggaggttgggggccggagtgcttcttcttggtggagggagg 32186207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 812
Target Start/End: Complemental strand, 6008344 - 6008301
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||    
T  6008344 gatcatctggtgcactttactcatttggcaggtgttggtaaagc 6008301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 816
Target Start/End: Complemental strand, 21548694 - 21548647
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    |||||| |||||||||||||| |||||||  |||||||||||||||||    
T  21548694 gatcatctggtgcagtttactcatttggcgtgtgttggtaaagctaaa 21548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 238 - 380
Target Start/End: Complemental strand, 24379154 - 24379012
Alignment:
Q  238 ttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgt 337  Q
    |||||||||||||  || |||||||||||| | || ||   | |||||||| | |||  ||||||||  ||||| |||||||| |||||||||||  | |    
T  24379154 ttgtttgacttagcagaaaacaaaaccattacggtagcctctttgttctctttgggtacggagcaggagggggaggggtggagatggaggcgtagactat 24379055  T
Q  338 gggattgggaggagactttattagaggagcttagggctttact 380  Q
    |||  |||||||||  |||||||||||||  |||||| |||||    
T  24379054 gggcgtgggaggagcttttattagaggagtgtagggcgttact 24379012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 25318154 - 25318056
Alignment:
Q  315 gtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcaga 413  Q
    |||||||||||  |||||||| ||| | |||||||||   ||  ||||||||  |||||||||||| | |||||||||||||   ||||||||||||||    
T  25318154 gtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttgatgtttctttgaatcctaatgtttcaga 25318056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 26205648 - 26205550
Alignment:
Q  315 gtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcaga 413  Q
    |||||||||||  |||||||| ||| | |||||||||   ||  ||||||||  |||||||||||| | |||||||||||||   ||||||||||||||    
T  26205648 gtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttgatgtttctttgaatcctaatgtttcaga 26205550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 14372565 - 14372606
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  ||||||||||||||||||||||||||| |||||    
T  14372565 ttggaggatgggggccggagttgttcttcttggtggagggag 14372606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 393
Target Start/End: Original strand, 17873500 - 17873736
Alignment:
Q  156 gaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgag 255  Q
    |||| ||||||||||| | || ||||||||||| |   ||| |||||| |||   ||| ||||| |||||||||||| ||||||||||||  |   ||||    
T  17873500 gaagttgggggatggttcagacacgttgttttgattcgataagtggttaggtttggtttctttttgtgagcggtttcctaggttgtttgatctttctgag 17873599  T
Q  256 aacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactt 355  Q
    ||||||  |||| | ||||| | | ||||||||||| || |  ||||||| ||||| |  |||| ||||||| | ||||||||||  |||||||||        
T  17873600 aacaaatacattacggtggcaagtttgttctctctt-gtgttaagcagggtggggaggcttggaagtggaggaggaggttgtgggcatgggaggaggagg 17873698  T
Q  356 tattagaggagcttagggctttactgcgtgatgtttct 393  Q
     ||||||||||  |||||||||| ||  ||||||||||    
T  17873699 aattagaggagtgtagggctttattgactgatgtttct 17873736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 523; Significance: 0; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 246 - 867
Target Start/End: Original strand, 16873263 - 16873885
Alignment:
Q  246 cttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgg 345  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  16873263 cttagctgagaacaaaaccatttctgtggcgaatatgttctctcttggcctggagcagggaggggatgggtggaggtggagacgtaggttgtgggcttgg 16873362  T
Q  346 gaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacagatggttgtggttacctgacccttcgggag 445  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16873363 gaggagattttattagaggagcttagggctttactgcttgatgtttctttgttgcctaatgtttcagacagatggttgtggttacctgaccctttgggag 16873462  T
Q  446 gttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgtagacgacgctttggagctagtttggcatcatcaggtccccttgaa 545  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||| |||| || ||  |||||||||||||||||||||||||||||||||||||||    
T  16873463 gttatgctgttcgaggagcctatgatcttttaacagagggtgccaatcctcttttacacagcgctttggagctagtttggcatcatcaggtccccttgaa 16873562  T
Q  546 ggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagctcgtggtgttcttcattcagagacgacactttgtgat 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  16873563 ggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttggcagctcgtggtgttcttcattcagaggcgacactttgtgat 16873662  T
Q  646 gcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaattctgttttattgtggcagcaggtgcgcaattggctaggttttatgg 745  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16873663 acaggatgcggtcatgttgaaacagccgaacatttgtttttattttgcccaaattctgttttattgtggcagcaggtgcgcaattggctaggttttatgg 16873762  T
Q  746 gggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaacattcctttctacag-taatctggattct 844  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  |||| |||||||||||||    
T  16873763 gggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaatgttccttttaacagctaatctggattct 16873862  T
Q  845 ttgtacttggattgtgtggaacg 867  Q
     ||||||||||||||||||||||    
T  16873863 atgtacttggattgtgtggaacg 16873885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 39430891 - 39430706
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||  |||| ||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||| ||||||| ||||||  |||||||    
T  39430891 ttgtggtatagtgttctagtcgcccgttatggcgaggttggtgggaggttggaggttgggggccggagttgttcttattggtggagggaggtggggagga 39430792  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttt 186  Q
    || | || || | ||||| |||||||||  |||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||    
T  39430791 ttagagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggttctgatacgttgttt 39430706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 49264501 - 49264679
Alignment:
Q  12 tgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggc 111  Q
    |||| ||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||| ||||||| ||||||  ||||||||| | || ||     
T  49264501 tgttatagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttcttattggtggagggaggtggggaggattagagatggt 49264600  T
Q  112 gttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
    | ||||| |||||||||  |||||||||||||||| |||| |||||||||||| |||||| |||||||| |||||||||    
T  49264601 gatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggttctgatacgctgttttggt 49264679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 20796238 - 20796093
Alignment:
Q  45 gaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgat 144  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||||  ||||||||| | || || | ||||| |||||||||  ||||||||||||||    
T  20796238 gaggttggaggttgggggccggagttgttcttattggtggagggaggtggggaggattagagatggtgatggtggtgtagggggtagttggtttggtgat 20796139  T
Q  145 agagtgcttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
    || |||| |||||||||||| |||||| ||||||||||||||||||    
T  20796138 agtgtgcgtaggaaggtgggtgatggttctgatacgttgttttggt 20796093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 34853174 - 34853579
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||||||||||||||||||  |||||||||||||| |||||||       |||||||| |||| ||||||| ||||||||||||| | | | ||    
T  34853174 ttgtggtatcatgttttagtcgcccaatatggcgaagtaggtgggaggt-------ggggggcctgagtggttcttcgtggtggcgggaggtaagcatga 34853266  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| || |  |||||  | || || || |||||||||||||| ||     ||| |||||| ||||||||||| ||  |||||||||  ||||| ||    
T  34853267 ttcgtgatggtgacggtgacattggtggtgggtggtttggtgatagtgttaggtggagggtgggtgatggtgctgaaactctgttttggttgcatagatg 34853366  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||||| |   ||  |||||| ||| |||| | | ||||||||||||  |||||||||||||||| | ||||| | | |||||||  | |||||||||    
T  34853367 gattggtggttccccgcttagtgtgcgatttcctcgcttgtttgacttatctgagaacaaaaccattacagtggctactttgttctccatgggtctggag 34853466  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||| ||||  |||||||| ||| | | |||| ||||||  ||||| | ||||||  ||||||||  |||||| |||||   |||||| |||||| | |    
T  34853467 cagggtggggcggggtggagatggtgtcataggctgtgggcgtgggatgggactttgctagaggagtgtagggcgttactatttgatgtctctttggttc 34853566  T
Q  401 ctaatgtttcaga 413  Q
     ||||||||||||    
T  34853567 ataatgtttcaga 34853579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 16 - 327
Target Start/End: Complemental strand, 26721232 - 26720921
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    ||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||| ||||||  ||| ||||| | || |  |  |    
T  26721232 ttagtcgtccgttatggcgaagtaggtgggaggttggaggttaggggccggagttgttcgtcttggtggagggaggtggggcggattagagatgtgggag 26721133  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||||| | || || || |||||||| ||  | |||  || |||| ||||||||||| | || || |||||||||| | ||| |||||| ||    ||| |    
T  26721132 gtgattttggtggtggctggtttggggagtgtgtgtctaagaagttgggggatggttcagacactttgttttggtttgataagtggttagggtcggtttc 26721033  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggc-gaatatgttctctcttggtctggagcagggaggggatgg 314  Q
    |||  |||||||||||| ||||||||||||  | | |||||||||| | ||| | ||||| | || |||||||||||||| | |||||||| ||||| |     
T  26721032 tttgtgtgagcggtttcctaggttgtttgatcttgctgagaacaaatctattacggtggcaggat-tgttctctcttggtgttgagcagggtggggaggc 26720934  T
Q  315 gtggaggtggagg 327  Q
    |||||||||||||    
T  26720933 gtggaggtggagg 26720921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28097492 - 28097581
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||| ||||||    
T  28097492 ttgtggtatcgagttttagtcgcccgttatggcgaagtaggtgggaggttggaggt-tggggccggagttattcttcttggtggagggagg 28097581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 17827863 - 17827725
Alignment:
Q  52 gaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgc 151  Q
    ||||| |||||| | |||||||||| ||||||| |||||| |||||||||| | || |  | |||||  ||||||||  |||||||||||||||| ||||    
T  17827863 gaggtagggggctgaagttgttcttattggtggagggaggtagggaggattagagatgatggtggtggagtagggggtagttggtttggtgatagtgtgc 17827764  T
Q  152 ttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
     |||||||||||| |||||  ||||||||||||||||||    
T  17827763 gtaggaaggtgggtgatgggactgatacgttgttttggt 17827725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 25504532 - 25504610
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||||||||||||||||| ||  | |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  25504532 gttttagtcgcccgttatggcgaggtgtgtgggaggttggaggttgggggccagagttgttcttcttggtggcgggagg 25504610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 16 - 351
Target Start/End: Original strand, 30110466 - 30110801
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||| |||||||||||||||| ||| |||||| ||||  |||| | || ||    |    
T  30110466 ttagtcgcccgttatggcgaagtaggtgggaggttggaggt-tggggctggagttgttcttcttgatggagggaggtagggcagattagagatgggagag 30110564  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgat--gtt 213  Q
    ||| | | || || || |||||||| ||  | |||  || |||| ||||||||||| | || || |||||||||| | ||| ||||||| | |||  |||    
T  30110565 gtgttattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggttcagacactttgttttggtatgataagtggtttag-gatcggtt 30110663  T
Q  214 ccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatg 313  Q
     ||||| ||||| |||||| ||||||||||||  |   |||||||||| | ||| | |||||   | |||||||||||||| | |||| ||| ||||| |    
T  30110664 tctttttgtgagaggtttcctaggttgtttgatctttctgagaacaaatctattacggtggcaggtttgttctctcttggtgtagagcggggtggggagg 30110763  T
Q  314 ggtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
     ||||| ||||||| | |||||||||| ||||||||||    
T  30110764 cgtggaagtggaggaggaggttgtgggcttgggaggag 30110801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 470
Target Start/End: Complemental strand, 20795980 - 20795813
Alignment:
Q  303 gggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcct 402  Q
    ||||||||| |||||||| |||||||| ||||||||||  |||||||||| | | |||||||||  |||| ||||||||| |||||||||| ||||  ||    
T  20795980 gggaggggaggggtggagttggaggcggaggttgtgggcgtgggaggagattgtcttagaggagtgtaggactttactgcttgatgtttctctgtttact 20795881  T
Q  403 aatgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatga 470  Q
     || |||||||    ||| | ||| | |||||||||   ||||||||| ||||| |||| ||||||||    
T  20795880 gatatttcagattcttggatttggcttcctgaccctataggaggttattctgttagaggtgcttatga 20795813  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 745 - 867
Target Start/End: Complemental strand, 44930105 - 44929982
Alignment:
Q  745 ggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaacattcctttctac-agtaatctggattc 843  Q
    |||| |||| |||||||| || | ||||||||| |||||||||||||| || ||||||||||||||||||| | ||| ||||||| | |||| ||| | |    
T  44930105 ggggcggatactaataatgttgcagatcatttgatgcagtttacttatatgacaggtgttggtaaagctaagcgttcgtttctacaactaatttggctcc 44930006  T
Q  844 tttgtacttggattgtgtggaacg 867  Q
    ||||||||| | || |||||||||    
T  44930005 tttgtactttggttttgtggaacg 44929982  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 734 - 867
Target Start/End: Original strand, 44415259 - 44415393
Alignment:
Q  734 taggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaacattcctttctac-agt 832  Q
    |||| ||| |||||| |||| |||||||| || |||||||| |||| || ||||||||| |  ||||||||||||||||||| | ||| ||||||| | |    
T  44415259 taggctttgtgggggcggatgctaataatgttgctgatcatctggtacaatttacttatataacaggtgttggtaaagctaagcgttcgtttctacaatt 44415358  T
Q  833 aatctggattctttgtacttggattgtgtggaacg 867  Q
    ||||||| | || ||||||||| || |||||||||    
T  44415359 aatctggctcctatgtacttgggttttgtggaacg 44415393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 10710738 - 10710778
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggt 56  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  10710738 ttagtcgcccgttatggcgaagtaggtgggaggttggaggt 10710778  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 309 - 480
Target Start/End: Original strand, 30970442 - 30970613
Alignment:
Q  309 ggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtt 408  Q
    ||||| |||||||||||||||||| |||||||  |||||||||    |  | | ||||  |||||| ||||| | ||||||||||||||  |||||||||    
T  30970442 ggatgtgtggaggtggaggcgtagattgtgggcgtgggaggaggagatggtggcggagtgtagggccttacttcttgatgtttctttgtctcctaatgtt 30970541  T
Q  409 tcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaaca 480  Q
    ||||| | |||| ||||| | || ||||| || ||||| ||| | ||||| || ||||||||| || |||||    
T  30970542 tcagataaatgggtgtggcttcccgacccctcaggaggctattcagttcgtggtgcttatgattttctaaca 30970613  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 746 - 817
Target Start/End: Original strand, 34853911 - 34853982
Alignment:
Q  746 gggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaac 817  Q
    |||||||| |||||||| || |  |||||||||||||||||||  || || |||||||||||||||||||||    
T  34853911 gggtggattctaataatattgcaaatcatttggtgcagtttacagatatgacaggtgttggtaaagctaaac 34853982  T

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Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 221 - 351
Target Start/End: Complemental strand, 17708373 - 17708243
Alignment:
Q  221 gtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggag 320  Q
    |||||||||||| ||||||||| ||  |   |||||||||| ||||| | |||||  |  |||||||||||||| | |||| ||| ||||| | |||||     
T  17708373 gtgagcggtttcctaggttgttcgatctttctgagaacaaatccattacggtggcagacttgttctctcttggtgttgagcggggtggggaggcgtggaa 17708274  T
Q  321 gtggaggcgtaggttgtgggattgggaggag 351  Q
    ||||||| | |||||||||| ||||||||||    
T  17708273 gtggaggaggaggttgtgggcttgggaggag 17708243  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 21528608 - 21528535
Alignment:
Q  172 gctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttga 245  Q
    |||||||||||||||||||   |||||||||| || |||||||||||| |||  || ||||||||| |||||||    
T  21528608 gctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttga 21528535  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 36306246 - 36306181
Alignment:
Q  153 taggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttt 218  Q
    ||||| ||| || |||||| |||||||||||||||||| | |||||||||| || |||||||||||    
T  36306246 taggagggttggagatggttctgatacgttgttttggtatgataggtggttaggggatgttccttt 36306181  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48072957 - 48073025
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    ||||||||||  |||||||||| | | ||||||||| |||| || ||||||||||| ||||||||||||    
T  48072957 ttgtggtatcgggttttagtcgacaggtatggcgaattaggtggcaggttggaggttgggggccggagt 48073025  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 7396260 - 7396298
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttg 51  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  7396260 gttttagtcgcccgctatggcgaagtaggtgggaggttg 7396298  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 315 - 413
Target Start/End: Original strand, 48265558 - 48265656
Alignment:
Q  315 gtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcaga 413  Q
    |||||||||||| |||||||||||| | |||||||||   || |||| ||||  |||||||||||| | |||||||   ||||| || |||||||||||    
T  48265558 gtggaggtggagacgtaggttgtggcagtgggaggaggagttgttagcggagtgtagggctttacttcttgatgttctcttgtttccgaatgtttcaga 48265656  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 347
Target Start/End: Complemental strand, 10150653 - 10150620
Alignment:
Q  314 ggtggaggtggaggcgtaggttgtgggattggga 347  Q
    |||||||||||||||| |||||||||||||||||    
T  10150653 ggtggaggtggaggcggaggttgtgggattggga 10150620  T

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Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 536
Target Start/End: Complemental strand, 17856343 - 17855815
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||       ||||| |||||||||||||||||||||||| |||| ||||||||    
T  17856343 ttgtggtatcatgttttagtcgcccgttatggcgaaataggtgggaggt-------gggggtccggagttgttcttcttggtggcgagaggtagggagga 17856251  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17856250 tttgtgagggtgttggcgatgtagggggtggttggttcggcgatagtgtgcttagaaaggtgggggatggtgctgatacgttgttttggtctcataggtg 17856151  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17856150 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagctgagaacaaaaccatttcggtggcgaatatgttctctcttggcctggag 17856051  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||||||||| |||||||| || || ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  17856050 cagggaggggaagggtggagttgaagacgtaggttgtgggcttgggaggagaatttattagaggagcttaaggctttactgcttgatatttctttgttgc 17855951  T
Q  401 ctaatgtttcagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgt 500  Q
    ||||||||||||| |||||| ||||||||||||| |||  ||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| |    
T  17855950 ctaatgtttcagatagatgggtgtggttacctgatcctgtggggggttatgctgtccgaggagcttatgatctattaacagagggtgccaatcctcttat 17855851  T
Q  501 agacgacgctttggagctagtttggcatcatcaggt 536  Q
     |||||| | ||||||||||||||||||||||||||    
T  17855850 ggacgacacattggagctagtttggcatcatcaggt 17855815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 410 - 867
Target Start/End: Complemental strand, 43572358 - 43571900
Alignment:
Q  410 cagacagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgtagacgacgc 509  Q
    |||| |||||||||||| |||||||||||  ||| |||||| |||||||||||||||||| ||| |||||||||| |||  ||| |||| | | ||| ||    
T  43572358 cagatagatggttgtggctacctgaccctgtggggggttatactgttcgaggagcttatgttctattaacagagggtgctcatcctcttttggccgaagc 43572259  T
Q  510 tttggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagct 609  Q
      |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||    
T  43572258 aatggagctagtatggcatcgtcaggtccccttaaaggtctcgatttttgcttggagacttctccgggatcggttaccttcaaaagcaaatttggcagct 43572159  T
Q  610 cgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaattctgttttat 709  Q
    |||||||||||   ||| ||| |||| ||||||| |   || || ||||||||||| || ||||||||||| |||||||||||||||||| ||||||| |    
T  43572158 cgtggtgttctcagttctgaggcgactctttgtgttatgggttgtggtcatgttgaaacggccgaacatttatttttattttgcccaaatactgttttgt 43572059  T
Q  710 tgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaa 809  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| ||||| |||| |||||| || |||||||||||||| ||| || ||||||||||    
T  43572058 tgtggcagcaggtgcgcaattggctaggttctatgggggcggatccgaataaccttcatgatcacttagtgcagtttacttacttgacaagtgttggtaa 43571959  T
Q  810 agctaaacattcctttctacag-taatctggattctttgtacttggattgtgtggaacg 867  Q
    |||||||| ||| ||||| ||| |||| |||||||| ||||||||||||||||||||||    
T  43571958 agctaaacgttcttttctgcagctaatttggattctgtgtacttggattgtgtggaacg 43571900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 18671784 - 18671372
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||| ||| ||||    
T  18671784 ttgtggtatcatgttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttcttcatggtggcgggaggtaggtagga 18671685  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| || |   ||||  |||| || || ||||| | |||||| ||     ||| ||| || ||||||| ||  || || || ||||| ||||||||    
T  18671684 ttcgtgatggtgacagtgacataggtggagggtggttcgatgatagtgttagatggagggtaggtgatggtggtgcgacttttttctggtcgcataggtg 18671585  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | | || | |   ||  || ||| |||||||| | | || |||||||||| |||||||||||||||| | |||||   | |||||||| | |||||||||    
T  18671584 gatcggaggttccccgctttgtgtgcggtttcctcgtttatttgacttagctgagaacaaaaccattacagtggcttctttgttctctttgggtctggag 18671485  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||| ||||| |||||||| ||| |||||||||||||||  ||||||||| |||| |||||||||  |||||| |||||   |||| | |||||| | |    
T  18671484 cagggtggggaggggtggagttggcggcgtaggttgtgggcatgggaggaggctttgttagaggagtgtagggcgttactatttgatatctctttggttc 18671385  T
Q  401 ctaatgtttcaga 413  Q
    |||||||||||||    
T  18671384 ctaatgtttcaga 18671372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 18768022 - 18767610
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||  |||||  ||||||||||||| ||| ||||    
T  18768022 ttgtggtatcaggttttagtctcccgttatggcaaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtaggtagga 18767923  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| |||||||||||  |||| || || ||||| |||||||  ||     ||| |||||| |||||| |    |||||||| ||||| ||||||||    
T  18767922 ttcgtgatggcgttggtgacataggtggagggtggttcggtgatattgttagacggagggtgggagatggtacaacgacgttgttctggtcgcataggtg 18767823  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |  |    || ||| ||||||||   | |||||||||||||  ||||| ||||||||| | |||||   | |||||||| | |||  ||||    
T  18767822 gattggaggtactttgctttgtgtgcggtttccccgcttgtttgacttagcagagaataaaaccattacggtggcctctttgttctctttgggtacggag 18767723  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||  ||||| |||||||||||||||||||| ||||||| ||||||||||  |||| ||||||||  |||||| |||||   |||| | |||||| | |    
T  18767722 caggatggggaggggtggaggtggaggcgtagattgtgggcttgggaggagcttttactagaggagtgtagggcgttactatttgatatctctttggttc 18767623  T
Q  401 ctaatgtttcaga 413  Q
    |||||||||||||    
T  18767622 ctaatgtttcaga 18767610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 13553710 - 13553899
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||  |||| ||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||  ||||||| ||||||  |||||||    
T  13553710 ttgtggtatagtgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctcattggtggagggaggtggggagga 13553809  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
    || | || || | ||||| |||||||||  |||||||||||||||| |||| |||||||||||| ||||||  | |||||||||||||||    
T  13553810 ttagagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggttttcatacgttgttttggt 13553899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 34457684 - 34458096
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||  |||||  ||||||||||||| ||| ||||    
T  34457684 ttgtggtatcaggttttagtcacccgttatggcaaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtaggcagga 34457783  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    |  |||| || | ||||||  |||| ||||| ||||| |||||||| ||     ||| |||||| |||||| |||  |||||||| ||||| ||||||||    
T  34457784 tccgtgatggtgctggtgacttaggtggcgggtggttcggtgatagtgttagacggagggtgggtgatggtactgcgacgttgttctggtcgcataggtg 34457883  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |  |||  || ||| ||| ||||   | |||||||||||||  ||||||||||||||| | || ||   | |||||||| | |||  ||||    
T  34457884 gattggaggttctccgctttgtgtgcgatttccccgcttgtttgacttagcagagaacaaaaccattacggtagcctctttgttctctttgggtacggag 34457983  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||  ||||| |||||||| |||||| ||||  | ||||  || ||||||  |||| ||||||||  |||||| |||||   |||| | |||||| | |    
T  34457984 caggagggggaggggtggagatggaggtgtagactttgggcgtgagaggagcttttactagaggagtgtagggcgttactatttgatatctctttggttc 34458083  T
Q  401 ctaatgtttcaga 413  Q
    |||||||||||||    
T  34458084 ctaatgtttcaga 34458096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 731 - 867
Target Start/End: Original strand, 37724142 - 37724278
Alignment:
Q  731 ggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaacattcctttctaca 830  Q
    ||||||||| |||||||  |||||| |||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||| ||||| ||| ||||| ||    
T  37724142 ggctaggttctatggggc-ggatccgaataatcttcatgatcatttagtgcagtttacttacttgacaggtgttggtaaagttaaacgttcttttctgca 37724240  T
Q  831 g-taatctggattctttgtacttggattgtgtggaacg 867  Q
    | |||| |||||||| ||||||| ||||||||||||||    
T  37724241 gctaatttggattctgtgtactttgattgtgtggaacg 37724278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 56 - 413
Target Start/End: Complemental strand, 19729043 - 19728689
Alignment:
Q  56 tggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttag 155  Q
    |||||||||||||||||||||   ||||| |||||| |||||||||| | || || | ||||| |||||||||  |||||||||||||||| |||| ||     
T  19729043 tggggggccggagttgttctt---ggtggagggaggtagggaggattcgagatggggatggtggtgtagggggtagttggtttggtgatagtgtgcgtaa 19728947  T
Q  156 gaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgag 255  Q
    ||||||||| |||||  |||||||||||||||||  |||  |||||| ||| |  |  ||| |||| |||  |||||  ||||||||||  |||| || |    
T  19728946 gaaggtgggtgatgggactgatacgttgttttggcatcactggtggtgtggcggagcgcctcttagagagttgtttccgaggttgtttggtttagctgtg 19728847  T
Q  256 aacaaaaccatttctgtggcgaatatgttctctcttg-gtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagact 354  Q
    ||||||   |||||||| || || ||||| || |||| |  ||  ||  || ||||| |||||||| ||||| || ||||||||||  |||||||||  |    
T  19728846 aacaaagttatttctgtagctaacatgttttc-cttgaggttgttgcgaggtggggaggggtggagttggagacggaggttgtgggcgtgggaggaggtt 19728748  T
Q  355 ttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcaga 413  Q
    ||||||||||||  |||||  ||||| | ||||||||||||||| |||||| |||||||    
T  19728747 ttattagaggagtgtagggtcttactacttgatgtttctttgtttcctaatatttcaga 19728689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 13 - 350
Target Start/End: Complemental strand, 4077870 - 4077540
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcg 112  Q
    ||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||| |||||||| ||||||  ||   |||| | || || |    
T  4077870 gttttagtcgcccgttatggcgaagtaggtgggaggttgg-------gggccggagttgttctacttggtggagggaggtgggtcagattagagatgggg 4077778  T
Q  113 ttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgt 212  Q
      |||||| | || || || |||||||| || || |||   |   || ||||||||||| | || || |||||||||| | ||| |||||| ||    ||    
T  4077777 gaggtgatattggtggtggctggtttggggagagtgtgtcgaaacagttgggggatggttcagacaccttgttttggtatgataagtggttaggatcggt 4077678  T
Q  213 tccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggat 312  Q
    ||||||| |||||||||||| | ||||||||||  |   |||||||||| ||||| | ||||||  | |||||||||||||| | |||||||| |||||     
T  4077677 tcctttttgtgagcggtttcctcggttgtttgatctttctgagaacaaatccattacggtggcgtgtttgttctctcttggtgttgagcagggtggggag 4077578  T
Q  313 gggtggaggtggaggcgtaggttgtgggattgggagga 350  Q
    | ||||| ||||||| | |||||||||| |||||||||    
T  4077577 gcgtggaagtggaggaggaggttgtgggcttgggagga 4077540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 121 - 398
Target Start/End: Original strand, 31025149 - 31025426
Alignment:
Q  121 gtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcctttta 220  Q
    ||||||||  |||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||||| |||  |||| | ||| |  |  ||| |||    
T  31025149 gtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggtactgatacgttgttttggtttcactggtgatgtggaggggcgcctctta 31025248  T
Q  221 gtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttg-gtctggagcagggaggggatgggtgga 319  Q
    | |||| |||||  ||||||||||| |||||||   |||||   ||| ||||||| || ||||| || |||| |  ||  |||||| ||||| |||||||    
T  31025249 gagagcagtttcccaggttgtttgatttagttgtagacaaatatattactgtggctaacatgttgtc-cttgaggttgacgcagggtggggaggggtgga 31025347  T
Q  320 ggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgtt 398  Q
    | |||||||| ||||||||||  |||||||||| | | |||||||||  || | ||||||| | |||||||||| ||||    
T  31025348 gttggaggcggaggttgtgggcgtgggaggagattgtcttagaggagtgtatgactttactacttgatgtttctctgtt 31025426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 45993177 - 45993089
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||||| ||  | |||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||    
T  45993177 gttttagtcgcccgttatggcgaggtgtgtgggaggttggaggttgggg-ccggagttgttcttcttggtggcgggaggtggggaggatt 45993089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 36227686 - 36227761
Alignment:
Q  11 atgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcg 86  Q
    ||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  36227686 atgttctagtcgcgcggtatggcgaagtaggtgggaggttggaggtggggggccggagtgattcttcttggtggcg 36227761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 5327374 - 5327270
Alignment:
Q  4 tggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggagg-tggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||| | |||| |||||| |||||||| ||||| ||||| ||||    
T  5327374 tggtaccatgttttagtcgcccgatatggcgaggtaggtgggaggttggaggctggggggacagagtggttcttattggtggcaggaggtagggacgatt 5327275  T
Q  103 tgtga 107  Q
     ||||    
T  5327274 cgtga 5327270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 34232303 - 34232111
Alignment:
Q  4 tggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggattt 103  Q
    |||||||  |||||||||| ||||||||||| |||||| ||||||||||       ||||||||||||||||||||||||| |||||| |||| |||||     
T  34232303 tggtatcgagttttagtcgaccgttatggcggagtaggtgggaggttgg-------gggccggagttgttcttcttggtggagggaggtagggcggatta 34232211  T
Q  104 gtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtt 203  Q
    | ||||| |  | ||||  ||| || ||||||||||| ||  | |||  || |||| ||||||||||| |||| || |||||||||| | ||| ||||||    
T  34232210 gagaagggggagatgattcaggtggaggttggtttggggagtgtgtgtctaagaagttgggggatggttctgacactttgttttggtatgataagtggtt 34232111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 47105266 - 47105325
Alignment:
Q  131 gttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
    |||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||||||    
T  47105266 gttggtttggtgatagtgtgcgtaggaaggtgggtgatggttctgatacgttgttttggt 47105325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 808 - 867
Target Start/End: Original strand, 5020905 - 5020965
Alignment:
Q  808 aaagctaaacattcctttctacag-taatctggattctttgtacttggattgtgtggaacg 867  Q
    |||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  5020905 aaagctaaacgttcctttttacagctaatctggattctatgtacttggattgtgtggaacg 5020965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 41340147 - 41339934
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttgg--------aggtggggggccggagttgttcttcttggtggcgggaggc 92  Q
    |||||||| ||||||||||||||||| |||||||| ||||| ||||||||||        |||| ||||| || ||| |||||| ||| |||| |||||     
T  41340147 ttgtggtaccatgttttagtcgcccgatatggcgaggtaggtgggaggttggaggtttggaggttgggggacgaagtggttcttattgttggcaggaggt 41340048  T
Q  93 agggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtct 192  Q
    |||||||||| |||| || | ||| ||  | || |  || ||||| ||| |||| ||| | |||| |||||| ||||| | ||| |||||||||||| ||    
T  41340047 agggaggattcgtgatggggatggcgacatgggtgatggctggttcggtaatagtgtgttgaggagggtgggagatggggatgaaacgttgttttggact 41339948  T
Q  193 cataggtggtttgg 206  Q
    ||||||||| ||||    
T  41339947 cataggtggattgg 41339934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 33795895 - 33795973
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||||| |||||| |||| ||  | |||||||||||||  |||||||||||| ||||||| |||||||||||||    
T  33795895 gttttagtcgctcgttattgcgaggtttgtgggaggttggagggtgggggccggagtggttcttcgtggtggcgggagg 33795973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 413
Target Start/End: Complemental strand, 8771752 - 8771636
Alignment:
Q  297 ggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttg 396  Q
    ||||||||  ||||| |||||||| |||||||||||  |||||| ||||||||||  |||| ||||||||  |||||| |||||   |||| | ||||||    
T  8771752 ggagcaggatggggaggggtggagttggaggcgtagactgtgggcttgggaggagcttttactagaggagtgtagggcgttactatttgatatctctttg 8771653  T
Q  397 ttgcctaatgtttcaga 413  Q
     | ||||||||||||||    
T  8771652 attcctaatgtttcaga 8771636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13440667 - 13440599
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    ||||||||||  |||||||||||| | ||||||||| |||| || ||||||||||| ||||||||||||    
T  13440667 ttgtggtatcgggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagt 13440599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 812
Target Start/End: Complemental strand, 8771280 - 8771237
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  8771280 gatcatctggtgcagtttactcatttggcaggtgttggtaaagc 8771237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 420
Target Start/End: Original strand, 15653403 - 15653650
Alignment:
Q  173 ctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgt 272  Q
    |||||||||||||||||| | |||||||||| || |||||||||||| |||  || ||||||||  ||||||| |||   ||||| ||   ||| ||| |    
T  15653403 ctgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgcccgttttcgtagactgtttgagttaacggagaataagctcatgtctat 15653502  T
Q  273 ggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagg 372  Q
    |||  |  |||||||| ||| | ||||||||   |||| |   ||||||||||||||||| |||||| | |||||||||    | |||| ||||  ||||    
T  15653503 ggcagacttgttctctgttgatttggagcagcagggggttttctggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagg 15653602  T
Q  373 gctttactgcgtgatgtttctttgttgcctaatgtttcagacagatgg 420  Q
    |||||||| | |||||||   ||||| || ||||||||||| ||||||    
T  15653603 gctttacttcttgatgttctcttgtttccgaatgtttcagatagatgg 15653650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 816
Target Start/End: Complemental strand, 41801300 - 41801253
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||    
T  41801300 gatcatctggtgcagtttactcatttggcaggtgttggtaaaactaaa 41801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 712 - 815
Target Start/End: Complemental strand, 42431228 - 42431125
Alignment:
Q  712 tggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaag 811  Q
    ||||||||| ||||  ||||| | |||||| ||||||||||| |||||||| |  || |||||||||| ||||||||  || || |||||| ||||||||    
T  42431228 tggcagcagttgcgtcattggattggttttgtgggggtggatactaataatgtaactcatcatttggttcagtttacgcatatgacaggtggtggtaaag 42431129  T
Q  812 ctaa 815  Q
    ||||    
T  42431128 ctaa 42431125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 770 - 816
Target Start/End: Original strand, 34458453 - 34458499
Alignment:
Q  770 atcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    ||||| |||||||||||||| |||||||||||||||||||| |||||    
T  34458453 atcatctggtgcagtttactcatttggcaggtgttggtaaaactaaa 34458499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 812
Target Start/End: Complemental strand, 18767247 - 18767211
Alignment:
Q  776 tggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18767247 tggtgcagtttactcatttggcaggtgttggtaaagc 18767211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 46624142 - 46624090
Alignment:
Q  166 gatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttt 218  Q
    |||||| |||||||||||||||||| | |||||||||| || |||||||||||    
T  46624142 gatggttctgatacgttgttttggtttgataggtggttaggggatgttccttt 46624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 308 - 426
Target Start/End: Complemental strand, 45943158 - 45943040
Alignment:
Q  308 gggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgt 407  Q
    |||||| ||||||||||||  |||| || ||| | |||||||||   ||  ||||||||  |||||||||||| | |||||||||||||   ||||||||    
T  45943158 gggatgtgtggaggtggagatgtagattatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttgatgtttctttgaatcctaatgt 45943059  T
Q  408 ttcagacagatggttgtgg 426  Q
    |||||| || ||| |||||    
T  45943058 ttcagatagctgggtgtgg 45943040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 11341368 - 11341327
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtgg 84  Q
    |||||||||||||| ||||||||||||||||| | |||||||    
T  11341368 gggaggttggaggtcgggggccggagttgttccttttggtgg 11341327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 606
Target Start/End: Original strand, 13554224 - 13554309
Alignment:
Q  521 tttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagca 606  Q
    |||||||||||||||| || |||||||| ||||| ||||||||| | ||| |  ||||||||||| | || | | |||||||||||    
T  13554224 tttggcatcatcaggttcctttgaaggtgtcgatatttgcttggcgtcttataagggatcggttatcgacgagatcaaatttagca 13554309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 605 - 865
Target Start/End: Original strand, 9163259 - 9163520
Alignment:
Q  605 cagctcgtggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaattctgt 704  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9163259 cagctcgtggtgtttttcattcagagacgacactttgtgatacaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaattctgt 9163358  T
Q  705 tttattgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgtt 804  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9163359 tttattgtggcagcaggtgcacaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgtt 9163458  T
Q  805 ggtaaagctaaacattcctttctacag-taatctggattctttgtacttggattgtgtggaa 865  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  9163459 ggtaaagctaaacgtgcctttctacagctaatctggattctttgtacttggattgtgtggaa 9163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 12 - 189
Target Start/End: Original strand, 21740060 - 21740237
Alignment:
Q  12 tgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggc 111  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||  ||||||||| | || ||     
T  21740060 tgttctagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggtcgggaggattcgagatggg 21740159  T
Q  112 gttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttgg 189  Q
    | ||| |||||||||||  |||||||||||||||| |||| |||||||||||| ||||   ||| |||||||||||||    
T  21740160 gatggcgatgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatgagactggtacgttgttttgg 21740237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 2 - 413
Target Start/End: Complemental strand, 45684789 - 45684378
Alignment:
Q  2 tgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggat 101  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||  ||||||||||||| ||| |||||    
T  45684789 tgtggtatcaggttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtaggtaggat 45684690  T
Q  102 ttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtgg 201  Q
    | |||| ||||| |||||   ||| || |||||||| |||||||| ||     ||| |||||| |||||| |    | |||||| ||||| |||||||||    
T  45684689 tcgtgatggcgtcggtgacacaggtggaggttggttcggtgatagtgttagacggagggtgggagatggtacgtcgaagttgttctggtcgcataggtgg 45684590  T
Q  202 tttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagc 301  Q
     |||| | |  |||| || | | ||||||||   | |||||||||||||  ||||| ||||||||| | |||||   | ||||||||   |||  |||||    
T  45684589 attggaggtactcctctttgcgtgcggtttccccgcttgtttgacttagcagagaataaaaccattacggtggcctctttgttctcttcgggtacggagc 45684490  T
Q  302 agggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcc 401  Q
    |||  ||||| |||||||| |||||||||||  |||||| ||||||||||  |||| ||||||||  |||||| |||||   |||| | |||||| | ||    
T  45684489 aggatggggaggggtggagttggaggcgtagactgtgggcttgggaggagcttttactagaggagtgtagggcgttactatttgatatctctttgattcc 45684390  T
Q  402 taatgtttcaga 413  Q
    ||||||||||||    
T  45684389 taatgtttcaga 45684378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 36709524 - 36709192
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||  ||||||||||||| ||| ||||    
T  36709524 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtaggtagga 36709425  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    ||||||| || ||  ||||  |||| || || ||||| |||||||| ||     ||| |||||| ||||||||||  ||  |||| ||||| ||||||||    
T  36709424 tttgtgatggtgtcagtgacataggtggagggtggttcggtgatagtgttagacggagggtgggtgatggtgctgcaactctgttctggtcgcataggtg 36709325  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |   ||  |  ||| || ||||| | | |||||||||||||  ||||||||||||||| | |||||   | ||||||| || |||  ||||    
T  36709324 gattggaggttccccgctgtgtgtgcagtttcctcgcttgtttgacttagcagagaacaaaaccattacggtggcttctttgttctccctgggtacggag 36709225  T
Q  301 cagggaggggatgggtggaggtggaggcgtagg 333  Q
    ||||  ||||| |||||||| ||||||||||||    
T  36709224 caggatggggaggggtggagttggaggcgtagg 36709192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 365
Target Start/End: Original strand, 42674965 - 42675328
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||  |||||  ||||||||||||| ||| ||||    
T  42674965 ttgtggtatcaggttttagtcgcccgttatggcgaagtagatgggaggttggaggt-gggggccggagtatttctttgtggtggcgggaggtaggcagga 42675063  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    |  |||| || | | ||||  |||| ||||| ||||| |||||||| ||     ||| |||||| |||||| |||  |||||||| ||||| ||||||||    
T  42675064 tccgtgatggtgctagtgacttaggtggcgggtggttcggtgatagtgttagacggagggtgggtgatggtactgcgacgttgttctggtcgcataggtg 42675163  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |  ||| ||| ||| ||||||||   | |||||||||||||| ||||||||||||||| | || ||   | |||||||| | |||  ||||    
T  42675164 gcttggaggttctccgttttgtgtgcggtttccccgcttgtttgacttagtagagaacaaaaccattacggtagcctctttgttctctttgggtacggag 42675263  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagagga 365  Q
    ||||  ||||| |||||||| |||||||||||  | ||||  |||||||||  |||| |||||||    
T  42675264 caggagggggaggggtggagatggaggcgtagactatgggcgtgggaggagcttttactagagga 42675328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 14864009 - 14864160
Alignment:
Q  19 gtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtg 118  Q
    |||||| |||||||||| || || |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | || || | |||||    
T  14864009 gtcgcctgttatggcgaggtgggtgggaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggaggattcgagatggggatggtg 14864108  T
Q  119 atgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatgg 170  Q
     |||||||||  |||||||||||||||| |||| | |||||||||| |||||    
T  14864109 gtgtagggggtagttggtttggtgatagtgtgcgtcggaaggtgggtgatgg 14864160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 15481284 - 15481662
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||| |||  ||| |  ||||||||||||| ||| ||||    
T  15481284 ttgtggtatcatgttctagtcgcccgttatggcaaagtaggtgggaggttggaggt-gggggccgaagtgtttccttgtggtggcgggaggtaggtagga 15481382  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| || || |||||  |||| || || ||||| | |||||| ||  |  ||| |||||| ||||||| ||  ||  |||| ||||| ||||||||    
T  15481383 ttcgtgatggtgtcggtgacataggtggagggtggttcgatgatagtgttatacggagggtgggtgatggtgttgcgactctgttctggtcgcataggtg 15481482  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    |||||| | |   ||  ||  || |||||||| | | |||||||||||||  ||||||||||||||| | |||||   | |||||||| | ||  |||||    
T  15481483 gtttggaggtccaccgctttttgtgcggtttcctcgtttgtttgacttagcagagaacaaaaccattacggtggcttctttgttctctatgggcgtggag 15481582  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttact 380  Q
    ||||| ||||| |||||||| ||||||| |||| | |||   ||||||||| ||||  ||||||||  |||||| |||||    
T  15481583 cagggtggggaggggtggagttggaggcctaggctatggacgtgggaggaggctttgctagaggagtgtagggcgttact 15481662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 47537867 - 47537532
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||| ||||||||||||| || |||||||||||  |||||| ||||||||||||||||||| |||||| |||| ||||| | || || |  |    
T  47537867 ttagtcgcccgtaatggcgaagtaggtggaaggttggaggttaggggccagagttgttcttcttggtggagggaggtagggcggattagggacggtggag 47537768  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||||  | || || || |||||||| ||  | |||  || |||| ||||||||||| | || || |||||||||| | |||||||||| ||    ||| |    
T  47537767 gtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggttcagacactttgttttggtatgataggtggttaggatcggtttc 47537668  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatggg 315  Q
    |||| |||||||||||  ||||||||| ||  |   |||||||||| ||||| | |||||   | |||||||||||||| | |||| ||| ||||| | |    
T  47537667 tttttgtgagcggtttactaggttgttcgatctttctgagaacaaatccattacagtggcaggtctgttctctcttggtgttgagcggggtggggaggcg 47537568  T
Q  316 tggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    |||| ||||||| | |||||||||| ||||||||||    
T  47537567 tggaagtggaggaggaggttgtgggcttgggaggag 47537532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 773 - 867
Target Start/End: Original strand, 19824093 - 19824188
Alignment:
Q  773 atttggtgcagtttacttatttggcaggtgttggtaaagctaaacattcctttctac-agtaatctggattctttgtacttggattgtgtggaacg 867  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| | ||||||| ||||| ||||||||||||||||||||||    
T  19824093 atttggtgcagtttacttatttgacaggtgttggtaaagctaaacgttcctttttacaactaatctgaattctatgtacttggattgtgtggaacg 19824188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 4 - 351
Target Start/End: Complemental strand, 48192409 - 48192063
Alignment:
Q  4 tggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggattt 103  Q
    |||||||  |||||||||| |||| ||||||||||||| |||||||||||||| |||||  |||||| ||||||||||||| |||||| |||| |||||     
T  48192409 tggtatcgagttttagtcgtccgt-atggcgaagtaggtgggaggttggaggttgggggttggagtttttcttcttggtggagggaggtagggcggatta 48192311  T
Q  104 gtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtt 203  Q
    | ||||| |  | |||| |||| || ||||||||||| ||  | |||  || |||| |||||||||||  ||| || |||||||||| | ||| ||||||    
T  48192310 gagaagggggagatgatttaggtggaggttggtttggggagtgtgtgtctaagaagttgggggatggttttgacactttgttttggtatgataagtggtt 48192211  T
Q  204 tggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcag 303  Q
     ||    | | ||||  ||| |||||||  ||||||||| || ||   |||||||||| ||||| | ||||| ||  |||||||||||||| | |||| |    
T  48192210 aggatcggcttctttgtgtgggcggttttctaggttgttcgatttttctgagaacaaatccattacggtggcaaacttgttctctcttggtgttgagcgg 48192111  T
Q  304 ggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    || ||||| | ||||| ||||||| | ||||||||||  |||||||||    
T  48192110 ggtggggaggcgtggaagtggaggaggaggttgtgggcctgggaggag 48192063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 43 - 688
Target Start/End: Original strand, 54439682 - 54440326
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtg 142  Q
    |||||||||||||| |||| | ||||||||||||| |||||| |||||| ||  |||||| |||| |||||||| | | |||| || |||||||| | ||    
T  54439682 gggaggttggaggttggggtc-ggagttgttcttcgtggtggagggaggtagataggattcgtgatggcgttggcggtataggtggtggttggttcgatg 54439780  T
Q  143 atagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtt 242  Q
    || | ||| | ||||||||||| |||||   ||||| | ||||||||   ||||| |||| |||||  |  ||  || ||||||||||||  ||||||||    
T  54439781 atggtgtgttgaggaaggtgggtgatgggattgatatgctgttttggctccatagatggtgtggtggggcgcccctttgtgagcggtttctgaggttgtt 54439880  T
Q  243 tgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggat 342  Q
     ||||| |  |||||||||||  || |  ||||  ||||||||||  ||| |  |  |||||  ||||| || ||||| |||||||||||  ||||||      
T  54439881 cgacttggcggagaacaaaacagttacattggctgatatgttctccattgattcgatgcaggatggggagggttggagttggaggcgtagactgtgggcg 54439980  T
Q  343 tgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacagatggttgtggttacctgacccttcgg 442  Q
    ||||| ||    ||||||||||||  |||||||||||||| ||||||| || |||| | || ||||||||| |  ||| ||||| | ||||||||    |    
T  54439981 tgggaagaagagttattagaggagtgtagggctttactgcttgatgttgctctgtttcatattgtttcagatacttggatgtggcttcctgaccccatag 54440080  T
Q  443 gaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaat-catcttgtagacgacgctttggagctagtttggcatcatcaggtcccct 541  Q
    |||||||  |||||||||| ||||||||  | |||||||    || |||| |||| ||| ||    |||||||| ||||||||||||| |||||| || |    
T  54440081 gaggttactctgttcgaggtgcttatgacttattaacagtttttgacaatccatc-tgtggatagtgctttggacctagtttggcatcgtcaggttcctt 54440179  T
Q  542 tgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagctcgtggtgttcttcattcagagacgacactttg 641  Q
    ||||| |||| || ||||||||  | ||  ||||| |||| ||||| || |||||||| || |||||||||||| |  |||| |||||   ||| || ||    
T  54440180 tgaagatctcaatctttgcttgacggctcattcggaatcgattacctactaaagcaaactttgcagctcgtggtataattcagtcagaagtgactctctg 54440279  T
Q  642 tgatgcaggatgcggtcatgttgagacagccgaacatttgtttttat 688  Q
    ||   ||||||||||||||||||| ||  |||| |||||||||||||    
T  54440280 tgtctcaggatgcggtcatgttgaaacgaccgaccatttgtttttat 54440326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 24926214 - 24926419
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||| |||||||||||||||||||| ||| | | | |||||||||||||| ||  |||||||| ||||| ||||||||| ||||| ||||||||    
T  24926214 ttgtggtatcgtgttttagtcgcccgttatgacgaggcatgtgggaggttggaggttggtcgccggagtggttctacttggtggccggaggtagggagga 24926313  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| || | ||||| | | || |  |||||||| |||| ||| ||  |  ||| |||||||||||| ||| ||||| |||||||| | ||||||||    
T  24926314 ttcgtgacggggatggtgctatgggtgagggttggttcggtgttagcgtaatgcggagggtgggggatggggctaatacgatgttttggacgcataggtg 24926413  T
Q  201 gtttgg 206  Q
    | ||||    
T  24926414 gattgg 24926419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 241 - 413
Target Start/End: Original strand, 18368721 - 18368893
Alignment:
Q  241 tttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtggg 340  Q
    |||||||||| |||||||||||||||| | |||||   ||| |||||| | |||||||||||||| ||||| |||||| | ||| |||||||||||||||    
T  18368721 tttgacttagctgagaacaaaaccattacagtggcttctatattctctatgggtctggagcagggtggggaggggtggtgttggcggcgtaggttgtggg 18368820  T
Q  341 attgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcaga 413  Q
      ||||||||| ||||  ||||||||  |||||| |||||   |||| | |||||||  ||||||||||||||    
T  18368821 tgtgggaggaggctttgctagaggagtgtagggcattactatttgatatctctttgtgtcctaatgtttcaga 18368893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 50544825 - 50544748
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  50544825 gttttagtcgcccgtt-tggcgaagtaggtgggaggttggaggtcgggggccggagttgttcttcttgatggagggagg 50544748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18366108 - 18366168
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggg 61  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18366108 ttgtggtttcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggg 18366168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 467
Target Start/End: Original strand, 46908208 - 46908661
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcg 112  Q
    ||||||| ||||||||| |||||| |||  ||||||||| || ||||||| ||||||||||||  ||||||| ||||||  |  |||||| | |  || |    
T  46908208 gttttagccgcccgttacggcgaaatagatgggaggttgtag-tggggggtcggagttgttctgtttggtggagggaggtggctaggattaggggcgggg 46908306  T
Q  113 ttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgt 212  Q
      |||| | | || || || |||||||  || || |||   |||||||||||||||||  |||| ||||||||||||| | |||  ||| | ||  ||||    
T  46908307 gcggtggtattggaggagggtggtttgaggaaagtgtgtcgaggaaggtgggggatgggtctgacacgttgttttggtttgataaatggctaggacatgt 46908406  T
Q  213 tccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggat 312  Q
    ||||||| |||  || |  ||| | |||||||| |||   ||||||||| ||||| | ||||||||| |||||||||||||| ||||  | || |||||     
T  46908407 tcctttttgtgttcgttaccgtcgtttgtttgatttatacgagaacaaatccattacggtggcgaatttgttctctcttggtgtggattacggtggggac 46908506  T
Q  313 gggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcag 412  Q
    | |||| |||||||||| || ||||| | || ||||||  |    |||||||||  | || ||||||||| |||||| |||||||   ||||||||||||    
T  46908507 gcgtggcggtggaggcggagattgtgagcttaggaggaagcggagttagaggagtgtgggactttactgcttgatgtgtctttgtgctctaatgtttcag 46908606  T
Q  413 acagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagctta 467  Q
    | |||||| ||||| |  |||| ||||| ||  ||||| ||||||| || |||||    
T  46908607 atagatgggtgtggatgtctgaaccttcagggagttattctgttcgtggtgctta 46908661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 229 - 350
Target Start/End: Complemental strand, 8943734 - 8943617
Alignment:
Q  229 tttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggc 328  Q
    |||||| ||| ||||||||||| |||||||||| ||||| | ||||| ||| |||| || |||||||||||||||||    || | ||||| |||||| |    
T  8943734 tttcgtcggtggtttgacttagctgagaacaaatccattacggtggcaaatttgttttcgcttggtctggagcaggg----gaggtgtggaagtggagac 8943639  T
Q  329 gtaggttgtgggattgggagga 350  Q
    ||||||||||||  ||||||||    
T  8943638 gtaggttgtgggcgtgggagga 8943617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 769 - 816
Target Start/End: Original strand, 42675732 - 42675779
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  42675732 gatcatctggtgcagtttactcatttggcaggtgttggtaaagctaaa 42675779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 812
Target Start/End: Complemental strand, 45684082 - 45683979
Alignment:
Q  709 ttgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggta 808  Q
    |||||||||||||||||| ||||| | |||||| | || |||||  |||| |   || | |||||| |||||||||||||| ||||||||||||||||||    
T  45684082 ttgtggcagcaggtgcgcgattggattggttttttaggagtggactctaacatcattacagatcatctggtgcagtttactcatttggcaggtgttggta 45683983  T
Q  809 aagc 812  Q
    ||||    
T  45683982 aagc 45683979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 413
Target Start/End: Original strand, 14867617 - 14867723
Alignment:
Q  307 ggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatg 406  Q
    ||||| |||||||| ||||| || ||||||||||  |||||||||  |||||||||||||  |||||| ||| | | ||||||||||||| | ||||||     
T  14867617 ggggaggggtggagttggagacggaggttgtgggcgtgggaggaggttttattagaggagtgtagggccttaatacttgatgtttctttggttcctaata 14867716  T
Q  407 tttcaga 413  Q
    |||||||    
T  14867717 tttcaga 14867723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 43121203 - 43121283
Alignment:
Q  4 tggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||  |||||||||||||||||||||||| ||||  |||||||||       ||||||||||||||||||||||||| ||||||    
T  43121203 tggtatcgagttttagtcgcccgttatggcgaaataggtaggaggttgg-------gggccggagttgttcttcttggtggagggagg 43121283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 351
Target Start/End: Complemental strand, 26846326 - 26846131
Alignment:
Q  156 gaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgag 255  Q
    |||| ||||||||||| | || || |||||||||| | ||| |||||| ||    ||| ||||  |||||||||||| ||||||||||||  | | ||||    
T  26846326 gaagttgggggatggttcagacactttgttttggtttgataagtggttagggtcggtttctttgtgtgagcggtttcctaggttgtttgatcttgctgag 26846227  T
Q  256 aacaaaaccatttctgtggc-gaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    |||||| | ||| | ||||| | || |||||||||||||| | |||||||| ||||| | |||||||||| || | ||||||||||  |||||||||    
T  26846226 aacaaatctattacggtggcaggat-tgttctctcttggtgttgagcagggtggggaggcgtggaggtgggggaggaggttgtgggcatgggaggag 26846131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 816
Target Start/End: Original strand, 18369249 - 18369296
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  18369249 gatcatctggtggagtttacttatttgacaggtgttggtaaagctaaa 18369296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 812
Target Start/End: Original strand, 20822791 - 20822834
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  20822791 gatcatctggtgcagtttactcatttggcaggtgttggtaaagc 20822834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 52250692 - 52250735
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcg 86  Q
    |||||||||||||| |||||||||||| ||||||||||||||||    
T  52250692 gggaggttggaggttgggggccggagtggttcttcttggtggcg 52250735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 236 - 426
Target Start/End: Complemental strand, 26010426 - 26010236
Alignment:
Q  236 ggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggtt 335  Q
    |||| |||||||||| |||||||||||| | |||  |||  | |||||| |||||||||||   ||| || ||||| || ||||||||| | |  ||  |    
T  26010426 ggttatttgacttagctgagaacaaaactacttcaatgggtactatgttttctcttggtcttatgcatggtggggacggttggaggtggcgccaaagact 26010327  T
Q  336 gtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacagatggttgtgg 426  Q
    ||||| ||||||||||   ||  ||||||||  |||| |||||||  ||||||||||| |||| |||||||||||||| | |||| |||||    
T  26010326 gtgggcttgggaggaggaattggtagaggagtgtaggactttactatgtgatgtttctgtgtttcctaatgtttcagataaatgggtgtgg 26010236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 16179513 - 16179472
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  16179513 ttggaggatgggggccggagttgttcttcttggtggcgggag 16179472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 6176016 - 6176072
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    |||||||||||| | ||||||||| |||| || ||||||||||| ||||||||||||    
T  6176016 gttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagt 6176072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 812
Target Start/End: Original strand, 15484020 - 15484120
Alignment:
Q  712 tggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaag 811  Q
    ||||||||||||||| ||||| | |||||||  || |||||  |||| |   || | |||||| |||||||||||||| ||||| |||||||||||||||    
T  15484020 tggcagcaggtgcgcgattggattggttttagtggagtggactctaacatcattgcagatcatctggtgcagtttactcatttgacaggtgttggtaaag 15484119  T
Q  812 c 812  Q
    |    
T  15484120 c 15484120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 23819160 - 23819095
Alignment:
Q  19 gtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||||||||||||||||| ||||||||       ||||| ||||||||||||||| ||||| ||||||    
T  23819160 gtcgcccgttatggcgaagtaggtgggaggtt-------gggggtcggagttgttcttctaggtggagggagg 23819095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 8130523 - 8130482
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtgg 84  Q
    |||||||||||||| |||||||||||| |||||| |||||||    
T  8130523 gggaggttggaggttgggggccggagtggttctttttggtgg 8130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 9e-57; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 35488451 - 35488039
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||| ||||    
T  35488451 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccgaagtggttcttcgtggtggcgggaggtaggtagga 35488352  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| || |   |||| ||||| || || |||||||||||||| ||     ||| |||||| |||||||| |  ||  |||| ||||| ||||||||    
T  35488351 ttcgtgatggtgacagtgacgtaggtggtgggtggtttggtgatagtgttaggcggagggtgggtgatggtgcagcgactctgttctggtcgcataggtg 35488252  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |   ||  | |||| ||||||||   | |||||||||||   |||||||||||||||| | ||||| | | |||||||| | |||||||||    
T  35488251 gattggcggttccccgctcagtgtgcggtttccccgcttgtttgacttgtctgagaacaaaaccattacagtggctactttgttctctatgggtctggag 35488152  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||| ||||| |||||||| ||| |||||||||||||||  ||||||||| ||||  ||||||||  || |||| ||||   |||| | |||||| | |    
T  35488151 cagggtggggaggggtggagttggcggcgtaggttgtgggcgtgggaggaggctttgctagaggagtgtatggctctactatttgatatctctttggttc 35488052  T
Q  401 ctaatgtttcaga 413  Q
    |||||||||||||    
T  35488051 ctaatgtttcaga 35488039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 9668532 - 9668721
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||  |||| ||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||| ||||||| ||||||  |||||||    
T  9668532 ttgtggtatagtgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttcttattggtggagggaggtggggagga 9668631  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
    || | || || | ||||| |||||||||  |||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||||||    
T  9668632 ttagagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcataggaaggtgggtgatggttctgatacgttgttttggt 9668721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 2 - 413
Target Start/End: Original strand, 28400077 - 28400488
Alignment:
Q  2 tgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggat 101  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||  ||||||||||||| ||| |||||    
T  28400077 tgtggtatcaggttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtaggtaggat 28400176  T
Q  102 ttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtgg 201  Q
    | |||| ||||| |||||   ||| || |||||||| |||||||| ||     ||| |||||| |||||| |    | |||||| ||||| |||||||||    
T  28400177 tcgtgatggcgtcggtgacacaggtggaggttggttcggtgatagtgttagacggagggtgggagatggtacgtcgaagttgttctggtcgcataggtgg 28400276  T
Q  202 tttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagc 301  Q
     |||| | |  |||| || | | ||||||||   | |||||||||||||  ||||| ||||||||| | |||||   | ||||||||   |||  |||||    
T  28400277 attggaggtactcctctttgcgtgcggtttccccgcttgtttgacttagcagagaataaaaccattacggtggcatctttgttctcttcgggtacggagc 28400376  T
Q  302 agggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcc 401  Q
    |||  ||||| |||||||| |||||||||||  |||||| ||||||||||  |||| ||||||||  |||||| |||||   |||| | |||||| | ||    
T  28400377 aggatggggaggggtggagttggaggcgtagactgtgggcttgggaggagcttttactagaggagtgtagggcgttactatttgatatctctttgattcc 28400476  T
Q  402 taatgtttcaga 413  Q
    ||||||||||||    
T  28400477 taatgtttcaga 28400488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 15018279 - 15018190
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||| ||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  15018279 gttttagtcgctcgttatggcgaagtatgtgggaggttggaggttgggggccgaagttgttcttcttggtggcgggaggtagggaggatt 15018190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 1380681 - 1380346
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  ||||  |||| | || || |  |    
T  1380681 ttagtcgcccgttatggcgaagtaggcgggaggttggaggttgggggccggagttgttcttcttggtggagggagatagggctgattagagacgggggag 1380582  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||||| |||| || ||||||||||| ||  | |||  || |||| ||||| ||||| | || || |||||||||| | |||  ||||| ||    ||  |    
T  1380581 gtgatataggtggaggttggtttggagagtgtgtgtctaagaagttggggaatggttcagacactttgttttggtttgataaatggttagggtcggtgtc 1380482  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatggg 315  Q
    |||| |||||||||||| ||||||||| ||  |   || |||||||  | |||| |||||  || |||| ||||||||| | |||  ||| ||||| | |    
T  1380481 tttttgtgagcggtttcctaggttgttcgatctctctgtgaacaaattcttttcggtggcagatttgttttctcttggtgtagagtggggtggggaggcg 1380382  T
Q  316 tggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    |||| ||||||| | |||||||||| ||||||||||    
T  1380381 tggaagtggaggaggaggttgtgggcttgggaggag 1380346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 3 - 409
Target Start/End: Complemental strand, 16213790 - 16213391
Alignment:
Q  3 gtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||  |||||  |||||| |||||| ||| ||||||    
T  16213790 gtggtatcatgttttagtcgcccgttatggcgaagt-------aggtgggaggtggggggccggagtgtttctttgtggtggtgggaggtaggtaggatt 16213698  T
Q  103 tgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggt 202  Q
     |||| || || |||||  |||| || || ||||| |||||||| ||     ||| |||||| |||||| |||  |||||||| ||||| |||||||||     
T  16213697 cgtgatggtgtcggtgacataggtggagggtggttcggtgatagtgttagacggagggtgggtgatggtactgcgacgttgttctggtcgcataggtgga 16213598  T
Q  203 ttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagca 302  Q
    |||| | |  |||  || ||| | ||||||   | ||||||||||||   ||||||||||||||| | |||||   | |||||||| | |||  ||||||    
T  16213597 ttggaggttctccgctttgtgtgtggtttccctgcttgtttgacttaacagagaacaaaaccattacggtggcctctttgttctctttgggtacggagca 16213498  T
Q  303 gggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcct 402  Q
    ||  | ||| || ||||| |||||||||||| | ||||  |||||||||| |||| ||||||||  |||||| |||||   |||| | |||||| | |||    
T  16213497 ggatgtggagggatggagttggaggcgtaggctttgggcgtgggaggagattttactagaggagtgtagggcgttactatttgatatctctttggttcct 16213398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 11234049 - 11234194
Alignment:
Q  45 gaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgat 144  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||| |||||||||| | || || | || |   ||||||||  ||||||||||||||    
T  11234049 gaggttggaggttgggggccggagttgttcttattggtgaagggaggtagggaggattagagatggtgatgctagagtagggggtagttggtttggtgat 11234148  T
Q  145 agagtgcttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
    || |||| |||||||||| | | |||| ||||||||||||||||||    
T  11234149 agtgtgcgtaggaaggtgagtgctggtactgatacgttgttttggt 11234194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 238 - 413
Target Start/End: Original strand, 8065989 - 8066164
Alignment:
Q  238 ttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgt 337  Q
    ||||||||||||  |||||||||||||||| | ||||| | | |||||||| | |||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  8065989 ttgtttgacttatctgagaacaaaaccattacagtggctactttgttctctatgggtctggagcagggtggggaggggtggagttggcggcgtaggttgt 8066088  T
Q  338 gggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcaga 413  Q
    |||  ||||||||| || |  ||||||||  ||||||  ||||   |||| | |||||| | ||||||||||||||    
T  8066089 gggcgtgggaggaggctatgctagaggagtgtagggcgctactatttgatatctctttggttcctaatgtttcaga 8066164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 11028472 - 11028401
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtgg 84  Q
    ||||||||||||||||| ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||    
T  11028472 gttttagtcgcccgttacggcgaagtaggtggaaggttggaggatgggggccagagttgttcttcttggtgg 11028401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 22724981 - 22725068
Alignment:
Q  17 tagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttg 104  Q
    |||||||||  |||||||| ||||| |||||||||||||  |||||||||||||||||||| ||||||||| |||  | |||||||||    
T  22724981 tagtcgcccactatggcgaggtaggcgggaggttggaggatgggggccggagttgttcttcgtggtggcggaaggttgtgaggatttg 22725068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 36804733 - 36804480
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||| |||||||||||||||||||||||| | | | ||||||||        |||| |||||| ||||||||||||||| ||||| ||||||||    
T  36804733 ttgtggtatcgtgttttagtcgcccgttatggcgaggcatgtgggaggtt--------gggggcggagtggttcttcttggtggcaggaggtagggagga 36804642  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| || | ||||| |   || |  |||||||| |||| ||| |||    ||| |||||||||||| |||  |||| |||||||| | ||||||||    
T  36804641 ttcgtgacggggatggtgttacgggtgagggttggttcggtgttagcgtgtcgcggagggtgggggatggggctactacgatgttttggacgcataggtg 36804542  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaa 262  Q
    | |||| | | | ||  || ||| |||||||| ||| || ||||| |||| |||||||||||    
T  36804541 gattggaggtttaccgctttgtgcgcggtttcctagattatttgatttagctgagaacaaaa 36804480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 816
Target Start/End: Original strand, 8066460 - 8066567
Alignment:
Q  709 ttgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggta 808  Q
    |||||||| ||||||||| ||||| | | |||| | ||||||||  |||||| | || |  |||||||||||||||||||| || |||||||||||||||    
T  8066460 ttgtggcaacaggtgcgcgattggattgattttcttggggtggactctaatattattgcatatcatttggtgcagtttactcatatggcaggtgttggta 8066559  T
Q  809 aagctaaa 816  Q
    ||| ||||    
T  8066560 aagttaaa 8066567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 812
Target Start/End: Original strand, 28400784 - 28400887
Alignment:
Q  709 ttgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggta 808  Q
    |||||||||||||||||| ||||| | |||||| | || |||||  |||| |   || | |||||| |||||||||||||| ||||||||||||||||||    
T  28400784 ttgtggcagcaggtgcgcgattggattggttttttaggagtggactctaacatcattacagatcatctggtgcagtttactcatttggcaggtgttggta 28400883  T
Q  809 aagc 812  Q
    ||||    
T  28400884 aagc 28400887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 812
Target Start/End: Complemental strand, 16213031 - 16212988
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  16213031 gatcatgtggtgcattttacttatttggcaggtgttggtaaagc 16212988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 812
Target Start/End: Complemental strand, 37643344 - 37643301
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  37643344 gatcatctggtgcagtttactcatttggcaggtgttggtaaagc 37643301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 43310831 - 43310788
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcg 86  Q
    |||||||||||||| |||||||||||| ||||||||||||||||    
T  43310831 gggaggttggaggttgggggccggagtggttcttcttggtggcg 43310788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 25380933 - 25381014
Alignment:
Q  14 ttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    |||||||||||||||||||||| ||||| ||||||||       ||||||| |||||||||||| |||||| ||||||  |||||||||    
T  25380933 ttttagtcgcccgttatggcgaggtaggtgggaggtt-------gggggccagagttgttcttcgtggtggagggaggtggggaggatt 25381014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 585
Target Start/End: Original strand, 9669052 - 9669116
Alignment:
Q  521 tttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggtta 585  Q
    |||||||||||||||| || |||||||| ||||||||||||||| | ||| |  |||||||||||    
T  9669052 tttggcatcatcaggttcctttgaaggtgtcgatttttgcttggcgtcttatgagggatcggtta 9669116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 26894150 - 26894206
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    |||||||||||| | ||||||||| |||| || ||||||||||| ||||||||||||    
T  26894150 gttttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccggagt 26894206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 26899589 - 26899645
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    |||||||||||| | ||||||||| |||| || ||||||||||| ||||||||||||    
T  26899589 gttttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccggagt 26899645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 26146787 - 26146744
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcg 86  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||    
T  26146787 gggaggttggaggttgggggccggagtggttattcttggtggcg 26146744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 8066274 - 8066332
Alignment:
Q  523 tggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcg 581  Q
    ||||||||||| || || |||||||||||  ||||||||||||| ||| ||||||||||    
T  8066274 tggcatcatcaagttcctttgaaggtctcagtttttgcttggaggcttattcgggatcg 8066332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 10598174 - 10598132
Alignment:
Q  148 gtgcttaggaaggtgggggatggtgctgatacgttgttttggt 190  Q
    |||| |||||||||||| |||||| ||||||||||||||||||    
T  10598174 gtgcgtaggaaggtgggtgatggttctgatacgttgttttggt 10598132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 11028127 - 11028069
Alignment:
Q  358 ttagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacag 416  Q
    |||||||||  |||| ||||| ||||||||||||||||||   ||||||||||||||||    
T  11028127 ttagaggagtgtaggactttattgcgtgatgtttctttgtatgctaatgtttcagacag 11028069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 37445664 - 37445618
Alignment:
Q  44 ggaggttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    ||||||||||||  |||||||||||||||||||| |||||| |||||    
T  37445664 ggaggttggaggatgggggccggagttgttcttcgtggtggtgggag 37445618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 426
Target Start/End: Complemental strand, 13550442 - 13550313
Alignment:
Q  297 ggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttg 396  Q
    ||||||| | ||||||| |||||||||||| |||||||| ||| | ||||| |||   ||  ||||||||   ||||||||| | | |||||||||||||    
T  13550442 ggagcagtggggggatgtgtggaggtggagacgtaggttatggcagtgggatgaggacttgctagaggagtgcagggctttaattcttgatgtttctttg 13550343  T
Q  397 ttgcctaatgtttcagacagatggttgtgg 426  Q
       |||||||||||||| || ||| |||||    
T  13550342 gatcctaatgtttcagatagctgggtgtgg 13550313  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 28253286 - 28253245
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  ||||||||||||||||||||||||||| |||||    
T  28253286 ttggaggatgggggccggagttgttcttcttggtggagggag 28253245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 2e-54; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 405
Target Start/End: Original strand, 4524153 - 4524555
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  4524153 ttgtgatatcatgttctagtcgcccgt-atggcgaagtaggcgggaggttggaggttgggggccggagttgttcttcttggtggcaggaggtagggagga 4524251  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    |||||||  | | ||| | |||||||||  | ||||| |||| ||| |||  ||||||||||||||||    |||||||||||||||||| |||||| ||    
T  4524252 tttgtgatagagatggcggtgtagggggtagatggttcggtgctagtgtgagtaggaaggtgggggatatgactgatacgttgttttggtatcatagatg 4524351  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    || ||| | ||||||| |||| ||||||||||  |||||||  || |||| || | | ||||   ||  |||||| |||||||  || |||||  ||  |    
T  4524352 gtgtggaggtgttcctcttagggagcggtttctgaggttgtacgaattagctgtggataaaaaagttattgtggctaatatgtgttcccttgggatgagg 4524451  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    || || ||||| |||||||| |||   |||||||||||||  |||||||||| | | |||||||||  ||||||||| |||| |||||||||| |||| |    
T  4524452 catggtggggaagggtggagatgg-ctcgtaggttgtgggtgtgggaggagaatgtcttagaggagtgtagggcttttctgcttgatgtttctctgtttc 4524550  T
Q  401 ctaat 405  Q
    |||||    
T  4524551 ctaat 4524555  T

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Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 45 - 403
Target Start/End: Original strand, 42953064 - 42953422
Alignment:
Q  45 gaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgat 144  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | || || | ||| |  ||||||||  ||||||||||||||    
T  42953064 gaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggaggattcgagatggggatggcggagtagggggtagttggtttggtgat 42953163  T
Q  145 agagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttg 244  Q
    || |||| |||||||||||| |||||  |||||||||||||||||   ||  |||||| ||| |  || ||| |||| |||  |||||  ||||||||||    
T  42953164 agtgtgcgtaggaaggtgggtgatgggactgatacgttgttttggcagcactggtggtgtggaggagtgcctcttagagagttgtttccgaggttgtttg 42953263  T
Q  245 acttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattg 344  Q
    | |||| || |||||||   |||||||| || || ||||| ||  | ||  ||  ||  || ||||| |||||||| |||||||| ||||||||||  ||    
T  42953264 atttagctgtgaacaaagatatttctgtagctaacatgttttccttggggttgttgcgaggtggggaggggtggagttggaggcggaggttgtgggcgtg 42953363  T
Q  345 ggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgccta 403  Q
    ||| |||| |||||||||||||  |||||| ||||||| ||||||||||||||| ||||    
T  42953364 ggaagagagtttattagaggagtgtagggccttactgcttgatgtttctttgtttccta 42953422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 5 - 332
Target Start/End: Complemental strand, 26694538 - 26694211
Alignment:
Q  5 ggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttg 104  Q
    ||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||  |||||  ||||||||||||| ||| |||||| |    
T  26694538 ggtatcaggttttagtcgtccgttatggcgaagtagatgggaggttggaggtggggggctggagtgtttctttgtggtggcgggaggtaggcaggattcg 26694439  T
Q  105 tgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggttt 204  Q
    ||| || | ||||||  |||| ||||| ||||| |||||||| ||     ||| |||||| |||||| |||  |||||||| ||||| ||||||||| ||    
T  26694438 tgacggggctggtgacttaggtggcgggtggttcggtgatagtgttagacggagggtgggtgatggtactgcgacgttgttctggtcgcataggtggctt 26694339  T
Q  205 ggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagg 304  Q
    |  | |  ||| ||| ||| |||||| |   | |||||||||||||  ||||||||||||||| | || ||   | |||||| | | |||  ||||||||    
T  26694338 gaaggttctccgttttgtgtgcggttcccccgattgtttgacttagcagagaacaaaaccattacggtagcctctttgttctatttgggtacggagcagg 26694239  T
Q  305 gaggggatgggtggaggtggaggcgtag 332  Q
      ||||| |||||||| |||||||||||    
T  26694238 agggggaggggtggagatggaggcgtag 26694211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 42778837 - 42778502
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||| ||||| | || || |  |    
T  42778837 ttagtcgcccgttatggcgaagtaggcgggaggttggaggttgggggccggagttgttcttcttggtggagggagatagggcggattagagacgggggag 42778738  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||| | |||| || ||||||||||| ||  | |||  || |||| ||||| ||||| | || || |||||||||| | |||  ||||| ||    ||  |    
T  42778737 gtgttataggtggaggttggtttggagagtgtgtgtctaagaagttggggaatggttcagacactttgttttggtttgataaatggttagggtcggtgtc 42778638  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatggg 315  Q
    |||| |||||||||||| ||||||||| ||  |   || ||| |||  |||||| |||||  || |||| ||||||||| | |||| ||| ||||| | |    
T  42778637 tttttgtgagcggtttcctaggttgttcgatctctctgtgaataaattcatttcggtggcagatttgttttctcttggtgtagagcggggtggggaggcg 42778538  T
Q  316 tggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    |||| ||||||| | |||||||||| ||||||||||    
T  42778537 tggaagtggaggaggaggttgtgggcttgggaggag 42778502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 19115038 - 19114949
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||| ||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  19115038 gttttagtcgctcgttatggcgaagtatgtgggaggttggaggttgggggccagagttgttcttcttggtggcgggaggtagggaggatt 19114949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 10562874 - 10562960
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||||| |||| |||||    
T  10562874 ttagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccagagttgttcttcttggtggagggaggtagggcggatt 10562960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 20396179 - 20396095
Alignment:
Q  18 agtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||| |||| |||||    
T  20396179 agtcgcccgttatggcgaagtgggtgggaggttggagtttgggggccggagttgttcttcttggtggcgggaggtagggcggatt 20396095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 53810455 - 53810374
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggt 82  Q
    |||||||| ||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  53810455 ttgtggtaccatgttttagtcgtctgttatggcgaagtaggtgggaggttggaggtggggggccggagtgattcttcttggt 53810374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 8935676 - 8935587
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||| ||||||||||| ||  | |||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||    
T  8935676 gttttagtcgctcgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggaggtggggaggatt 8935587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 218 - 405
Target Start/End: Original strand, 4640422 - 4640609
Alignment:
Q  218 ttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtg 317  Q
    |||||| |||||||| |||||| ||||| |||| | ||||||||| |||| | |||||  || |||||||||||||||| | | |||||||||| || ||    
T  4640422 ttagtgtgcggtttcataggttatttgagttagataagaacaaaatcattacggtggctgatttgttctctcttggtctaggggagggaggggagggttg 4640521  T
Q  318 gaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaat 405  Q
    ||| ||| | || |||||||||| ||||||||||   || |||||||||  |||| || ||||   |||||| |||||||| ||||||    
T  4640522 gagttggcgtcgaaggttgtgggcttgggaggaggacttgttagaggagtgtaggactctactatttgatgtctctttgtttcctaat 4640609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 34975146 - 34975079
Alignment:
Q  4 tggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttg 71  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||| |||| ||||||||||||||    
T  34975146 tggtatcatgttttagtcgtccgttatgacgaagtaggtgggaggttgaaggttgggggccggagttg 34975079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 13158324 - 13158401
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||| ||||||  ||||||||||||||||||| ||||||    
T  13158324 gttttagtcacccgttatggcgaagcaggtgggaggttggaggt-gggggctagagttgttcttcttggtggagggagg 13158401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 23657899 - 23657821
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||||||||||||| |||| ||  | |||||||||||||  |||||||| |||||||||||||||||||||||||    
T  23657899 gttttagtcgcccgttatagcgaggtgtgtgggaggttggaggatgggggccgaagttgttcttcttggtggcgggagg 23657821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 49925835 - 49925883
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49925835 gggaggttggaggttgggggccggagttgttcttcttggtggcgggagg 49925883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 53486472 - 53486563
Alignment:
Q  4 tggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||       ||||| ||||||||||||||||||||| |||||| |||| |||||    
T  53486472 tggtatcgagttttagtcgcccgttatggcgaagtaggtgggaggtt-------gggggtcggagttgttcttcttggtggagggaggtagggcggatt 53486563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 792 - 867
Target Start/End: Complemental strand, 20669309 - 20669233
Alignment:
Q  792 tttggcaggtgttggtaaagctaaacattcctttctaca-gtaatctggattctttgtacttggattgtgtggaacg 867  Q
    |||| ||||||||||||||||||||| ||||||||| ||  || | |||||||| ||||||||||||||||||||||    
T  20669309 tttgacaggtgttggtaaagctaaacgttcctttctgcatctattatggattctgtgtacttggattgtgtggaacg 20669233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 351
Target Start/End: Original strand, 34322000 - 34322195
Alignment:
Q  156 gaaggtgggggatggtgctgatacgttgttttggtctcataggtggtt-tggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttga 254  Q
    |||| ||||||||||| |||| || |||||||||| | |||||||||| || | | ||| ||||  |||||||||||| ||||||||| ||  | | |||    
T  34322000 gaagttgggggatggttctgacactttgttttggtatgataggtggttatgatca-gtttctttgtgtgagcggtttcctaggttgttcgatcttgctga 34322098  T
Q  255 gaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    ||||||| ||||| | |||||  |  |||||||||||||| | |||| ||| ||||| | ||||| ||||||| | ||||||||||  |||||||||    
T  34322099 gaacaaatccattacggtggcagacttgttctctcttggtgttgagcggggtggggaggcgtggaagtggaggaggaggttgtgggcctgggaggag 34322195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 340
Target Start/End: Original strand, 13158536 - 13158638
Alignment:
Q  235 aggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggt 334  Q
    ||||||||||| |||| |||||||||| | ||| |  |||| ||  |||||||||||||| |||||| |||   ||||| ||||||||||||||||||||    
T  13158536 aggttgtttgagttagctgagaacaaatcaattacgatggcaaaattgttctctcttggtgtggagcgggg---ggatgcgtggaggtggaggcgtaggt 13158632  T
Q  335 tgtggg 340  Q
    ||||||    
T  13158633 tgtggg 13158638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 19648273 - 19648222
Alignment:
Q  51 ggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  19648273 ggaggttgggggccggagttgttcttcttggtggcgggaggtggggaggatt 19648222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 812
Target Start/End: Original strand, 46639224 - 46639327
Alignment:
Q  709 ttgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggta 808  Q
    |||||||||||||||||| ||||| | |||||| | || |||||  |||| |   || | |||||| |||||||||||||| ||||||||||||||||||    
T  46639224 ttgtggcagcaggtgcgcgattggattggttttttaggagtggactctaacatcattacagatcatctggtgcagtttactcatttggcaggtgttggta 46639323  T
Q  809 aagc 812  Q
    ||||    
T  46639324 aagc 46639327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 350
Target Start/End: Complemental strand, 53810297 - 53810106
Alignment:
Q  159 ggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaac 258  Q
    |||||| ||||| ||||| || ||||||||||| |||| | || |||||| | | ||  |||||| |||||||||| | ||||||||||| | |||||||    
T  53810297 ggtgggtgatggggctgaaactttgttttggtcgcataagcggattggtggtataccgcttagtgtgcggtttcgtcgtttgtttgacttggctgagaac 53810198  T
Q  259 aaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggagga 350  Q
    |||| |||| | ||||| ||  |||||||  | ||||||| || || |||||| |||||||  ||| |||| || |||||||  ||||||||    
T  53810197 aaaatcattacggtggctaacttgttctcaatgggtctggcgcgggaaggggaggggtggacttggcggcgcagattgtgggcgtgggagga 53810106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23873002 - 23873070
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    ||||||||||  |||||||||||| | ||||||||| |||| || ||||||||||| ||||||||||||    
T  23873002 ttgtggtatcgggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagt 23873070  T

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Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 55299226 - 55299158
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagt 69  Q
    ||||||||||  |||||||||||| | ||||||||| |||| || ||||||||||| ||||||||||||    
T  55299226 ttgtggtatcgggttttagtcgccaggtatggcgaattaggtggcaggttggaggttgggggccggagt 55299158  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 420
Target Start/End: Original strand, 8654751 - 8655018
Alignment:
Q  153 taggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagtt 252  Q
    ||||| ||| || ||||| ||| |||||||||||||||   |||||||||| || |||||||||||| |||  || || |||||| ||||||| |||       
T  8654751 taggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaaca 8654850  T
Q  253 gagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggaga 352  Q
    ||||| ||    || ||||||||  |  |||| ||| ||| |  ||||||| | |||| |  |||||||||||| |||||||||||| | |||||||||     
T  8654851 gagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggagg 8654950  T
Q  353 ctttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacagatgg 420  Q
      || |||| ||||  |||||||||||| | |||||||   ||||| || ||||||||||| ||||||    
T  8654951 acttgttagcggagtgtagggctttacttcttgatgttctcttgtttccgaatgtttcagatagatgg 8655018  T

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Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 816
Target Start/End: Complemental strand, 26693773 - 26693726
Alignment:
Q  769 gatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaa 816  Q
    |||||| |||||||||||| | ||||||||||||||||||||||||||    
T  26693773 gatcatctggtgcagtttattcatttggcaggtgttggtaaagctaaa 26693726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 29553278 - 29553356
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||| |||||||||| || ||  | |||||||||||||  |||||||||||| ||||||  |||||||||||||    
T  29553278 gttttagtcacccgttatggtgaggtttgtgggaggttggaggatgggggccggagtggttctttgtggtggcgggagg 29553356  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 5789666 - 5789707
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  5789666 ttggaggatgggggccggagttgttcttcttggtggcgggag 5789707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 817
Target Start/End: Complemental strand, 53809744 - 53809639
Alignment:
Q  712 tggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaag 811  Q
    ||||||||||||| | | ||| | || ||| | |||||| || |||||||| || | |||||||||||||||||||| ||| || |||||| ||||||||    
T  53809744 tggcagcaggtgcacgagtggattggatttgttggggtgaattctaataatatttccgatcatttggtgcagtttacgtatatgacaggtggtggtaaag 53809645  T
Q  812 ctaaac 817  Q
     |||||    
T  53809644 ttaaac 53809639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 1828123 - 1828155
Alignment:
Q  58 gggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||||||||||||||||||||||||||||    
T  1828123 gggggccggagttgttcttcttggtggcgggag 1828155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 618
Target Start/End: Original strand, 4640722 - 4640821
Alignment:
Q  518 tagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagctcgtggtgt 617  Q
    |||||||||||||| |||| || |||||||||||| ||||| ||||| | ||  || ||||||| || || |||||||| ||||| |||| |||||||||    
T  4640722 tagtttggcatcatgaggtacctttgaaggtctcggttttt-cttggcggctcattagggatcgtttgcctacaaaagctaatttggcagttcgtggtgt 4640820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 19735318 - 19735350
Alignment:
Q  58 gggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||||||||||||||||||||||||||||    
T  19735318 gggggccggagttgttcttcttggtggcgggag 19735350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 615
Target Start/End: Original strand, 9992883 - 9992978
Alignment:
Q  520 gtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagctcgtggt 615  Q
    |||||||||||| |||| || |||||||| ||||| ||||||||| | ||  || |||||||| |||| || | ||||||||| ||||| ||||||    
T  9992883 gtttggcatcattaggttcctttgaaggtatcgatctttgcttggcgtctcattagggatcggctaccgacgagagcaaatttggcagcacgtggt 9992978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 615
Target Start/End: Original strand, 42953539 - 42953634
Alignment:
Q  520 gtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagctcgtggt 615  Q
    ||||||||||||||||| || |||||| | ||||| || |||||| | ||  || ||||||||||||| || | ||||||||| ||||| ||||||    
T  42953539 gtttggcatcatcaggttcctttgaagatttcgatcttcgcttggcgtctcattagggatcggttaccgacgagagcaaatttggcagcacgtggt 42953634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 47541384 - 47541321
Alignment:
Q  156 gaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcctttt 219  Q
    |||||| || ||||| | ||||||||||||||||| | |||||||||| || ||||||||||||    
T  47541384 gaaggttggagatggagatgatacgttgttttggtttgataggtggttaggggatgttcctttt 47541321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 9992706 - 9992768
Alignment:
Q  343 tgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaat 405  Q
    |||||||| | |||||||||||||  |||||| ||||||| |||||||||| |||| ||||||    
T  9992706 tgggaggataatttattagaggagtgtagggccttactgcttgatgtttctctgtttcctaat 9992768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 3129621 - 3129726
Alignment:
Q  114 tggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgtt 213  Q
    |||||||| || |||||| ||||||| ||||   |||  ||||| ||| || ||||| |||||||| |||||||||| |  ||||||||| || ||||||    
T  3129621 tggtgatggagagggcggctggtttgttgatcatgtggctaggagggttggagatggagctgatacattgttttggtttggtaggtggttaggggatgtt 3129720  T
Q  214 cctttt 219  Q
    ||||||    
T  3129721 cctttt 3129726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 772 - 817
Target Start/End: Original strand, 4640975 - 4641020
Alignment:
Q  772 catttggtgcagtttacttatttggcaggtgttggtaaagctaaac 817  Q
    |||||||||||||||||| || || ||||||||||||||| |||||    
T  4640975 catttggtgcagtttactcatatgacaggtgttggtaaagataaac 4641020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 593
Target Start/End: Original strand, 8655110 - 8655191
Alignment:
Q  512 tggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaa 593  Q
    ||||||| || |||||  ||||||| ||||||||| | ||  |||||||||||||||| || | |||||||||||| |||||    
T  8655110 tggagctggtgtggcacaatcaggttcccttgaagatttcagtttttgcttggagactcctccaggatcggttaccaacaaa 8655191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 29328344 - 29328393
Alignment:
Q  42 ggggaggttggaggtgggg-ggccggagttgttcttcttggtggcgggag 90  Q
    ||||||||||||||||| | ||||||||| |||||| |||||||||||||    
T  29328344 ggggaggttggaggtggagaggccggagtggttctttttggtggcgggag 29328393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 55725280 - 55725321
Alignment:
Q  49 ttggaggtggggggccggagttgttcttcttggtggcgggag 90  Q
    |||||||  ||||||||||||||||||||||||||| |||||    
T  55725280 ttggaggatgggggccggagttgttcttcttggtggagggag 55725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 8e-45; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 44082538 - 44082950
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||  ||||||||||||| ||| ||||    
T  44082538 ttgtggtatcaggttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggtcggagtgtttctttgtggtggcgggaggtaggtagga 44082637  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
    || |||| |||||||||||   ||| || || ||||| |||||||| ||     ||| |||||| |||||| |    | |||||| ||||| ||||||||    
T  44082638 ttcgtgatggcgttggtgacacaggtggagggtggttcggtgatagtgttagacggagggtgggagatggtacgacgatgttgttctggtcgcataggtg 44082737  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||| | |  |||  || ||| ||||||||   | |||||||||||||  ||||| ||||||||| | |||||   | |||||||| | |||   |||    
T  44082738 gattggaggtactccgctttgtgtgcggtttccccgcttgtttgacttagcagagaataaaaccattacggtggcatctttgttctctttgggtacagag 44082837  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgc 400  Q
    ||||  ||||| |||||||||||||||||||| ||||||| |||||| |||  |||| ||||||||  |||||| |||||   |||| | |||||| | |    
T  44082838 caggatggggaggggtggaggtggaggcgtagattgtgggcttgggatgagcttttactagaggagtgtagggcgttactatttgatatctctttggttc 44082937  T
Q  401 ctaatgtttcaga 413  Q
    |||||||||||||    
T  44082938 ctaatgtttcaga 44082950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 11393874 - 11394062
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||  |||| | ||||||||||||||||| || || ||||||||||||  |||||||||||||||||||||||||||| |||||| ||||||||    
T  11393874 ttgtggtatagtgttcttgtcgcccgttatggcgaggttggtgggaggttggagtcggggggccggagttgttcttcttggtggagggaggtagggagga 11393973  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttgg 189  Q
    || | || || | |||||||  ||||||  ||||||||||||||||||||| |||||||||||| |||||  ||||||||| |||||||    
T  11393974 ttcgagatggagatggtgattcagggggtagttggtttggtgatagagtgcgtaggaaggtgggtgatgggactgatacgtggttttgg 11394062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 17659430 - 17659095
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||| ||||| | || || |  |    
T  17659430 ttagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggtagggcggattagggacggtggag 17659331  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    ||||  | || || || |||||||| ||  | |||  || |||| ||||||||||| | ||||| |||||||||| | |||||||||| |||   ||| |    
T  17659330 gtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggttcagatactttgttttggtttgataggtggttaggttcggtttc 17659231  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatggg 315  Q
    |||  ||||| |||||| |||||||| |||  |  |||||||||||  |||| | |||||   | | |||||||||||| |||||| ||| ||||| | |    
T  17659230 tttctgtgagaggtttcctaggttgtatgatctttttgagaacaaatacattacagtggcaggtctattctctcttggtgtggagcggggtggggaggcg 17659131  T
Q  316 tggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    |||| ||||||| | |||||||||| ||||||||||    
T  17659130 tggaagtggaggaggaggttgtgggcttgggaggag 17659095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 425
Target Start/End: Complemental strand, 12134941 - 12134518
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||||||| |||||||||||||||||||||| ||||   ||||||||||||| |||||||||||| ||||||  ||||||| ||||| ||||||||    
T  12134941 ttgtggtatcatattttagtcgcccgttatggcgaggtagcttggaggttggaggttgggggccggagtggttctttatggtggcaggaggtagggagga 12134842  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
     | |||| || | ||  ||| | || | ||||||||||||| |||| |||   |||| |||||| ||||| ||||| |||||||||||| | ||||||||    
T  12134841 -tcgtgatggggatgccgatatgggtgacggttggtttggtaatagtgtgtcgaggagggtgggagatggggctgacacgttgttttggacgcataggtg 12134743  T
Q  201 gtttggtgatgtt-ccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctgga 299  Q
    | || |||||||| ||| || ||| |||||||| | | || |||||||||  | | |||||||||    |||||||  | |||||||||||||||||       
T  12134742 gatt-gtgatgttacctctttgtgtgcggtttcctcgtttatttgacttaactaaaaacaaaaccgccactgtggctgacatgttctctcttggtctaac 12134644  T
Q  300 gcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttg 399  Q
     |  || || | ||||||||||||| |||||| ||||||||  |||||||||   ||  ||||||||  ||||||||||||   ||| |||||| | ||     
T  12134643 acttggtggtgttgggtggaggtggcggcgtacgttgtgggcgtgggaggaggacttggtagaggagtgtagggctttactatttgacgtttctgttttt 12134544  T
Q  400 cctaatgtttcagacagatggttgtg 425  Q
    |||||||||||||| |||||| ||||    
T  12134543 cctaatgtttcagatagatgggtgtg 12134518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 45 - 189
Target Start/End: Complemental strand, 24794327 - 24794183
Alignment:
Q  45 gaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgat 144  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | || || | ||||| |||||||||  ||||||||||||||    
T  24794327 gaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggaggattcgagatggggatggtggtgtagggggtagttggtttggtgat 24794228  T
Q  145 agagtgcttaggaaggtgggggatggtgctgatacgttgttttgg 189  Q
    || |||| |||||||||||| |||||  | |||||||||||||||    
T  24794227 agtgtgcgtaggaaggtgggcgatgggaccgatacgttgttttgg 24794183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 313 - 853
Target Start/End: Complemental strand, 7555749 - 7555208
Alignment:
Q  313 gggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcag 412  Q
    |||||||| ||| | | |||||||||||  |||||||||| |||||||||||||  |||||||||| ||  ||||||||||||||| |||||||||||||    
T  7555749 gggtggagttggcgccataggttgtgggtgtgggaggagaatttattagaggagtgtagggctttattggttgatgtttctttgtttcctaatgtttcag 7555650  T
Q  413 acagatggttgtggttacctgacccttcgggaggttatgctgttcgaggagcttatgatcttttaacagaggatgccaatcatcttgtagacgacgcttt 512  Q
    | | |||| |||||  |||| |||||  ||| ||||||   |||||||  ||||||||| | ||| ||||   || || |   | | | ||   ||||||    
T  7555649 ataaatggatgtggccacctaaccctatggggggttatttagttcgagatgcttatgatttattatcagattgtgacacttcacctatggatagcgcttt 7555550  T
Q  513 ggagctagtttggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcggttacccacaaaagcaaatttagcagctcgt 612  Q
    |||  |||| || ||||||||||| ||||||||||||||| | ||||||||| | || |||| |||||| ||||| |||||||||||| | ||||   ||    
T  7555549 ggacttagtatgacatcatcaggttcccttgaaggtctcggtctttgcttggcggctccttcaggatcgtttacctacaaaagcaaatctggcagtctgt 7555450  T
Q  613 ggtgttcttcattcagagacgacactttgtgatgcaggatgcggtcatgttgagacagccgaacatttgtttttattttgcccaaattctgttttattgt 712  Q
    ||| |  ||||||||||  ||||   ||||| |||||| ||| |||||||||| ||  | || ||||||||| ||| |||| ||| || |  ||  || |    
T  7555449 ggtataattcattcagaagcgacttattgtgttgcagggtgcagtcatgttgaaacgtctgaccatttgtttctatcttgcacaactttttcttcgttat 7555350  T
Q  713 ggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagc 812  Q
    |||||||| | ||| | ||| | || ||| | |||| |||| ||||| || |  | | |||||||||||| ||||||||| || ||| ||||||||||||    
T  7555349 ggcagcagatacgccactggattggatttgtaggggcggattctaattatatctccgctcatttggtgcaatttacttatatgacagatgttggtaaagc 7555250  T
Q  813 taaacattcctttctacag-taatctggattctttgtacttg 853  Q
    || || ||| ||||| ||| |||||||  |||||||||||||    
T  7555249 tagacgttcgtttctgcagctaatctgacttctttgtacttg 7555208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6901523 - 6901417
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||| ||||||||||||||| ||| | ||||||||    
T  6901523 ttgtggtatcatgttttagtcgcccgttatggcgaggtaggtgggaggttggaggttgggggccgaagtggttcttcttggtggcaggaagtagggagga 6901424  T
Q  101 tttgtga 107  Q
    || ||||    
T  6901423 ttcgtga 6901417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 36157755 - 36157678
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  36157755 gttttagtcgcccgt-atggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggagg 36157678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23942701 - 23942636
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccgg 66  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  23942701 ttgtggtatcatgttttagtcgcccgttgtgacgaagtaggtgggaggttggaggtggggggccgg 23942636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 153 - 420
Target Start/End: Complemental strand, 7452814 - 7452547
Alignment:
Q  153 taggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagtt 252  Q
    ||||| ||| || |||||| |||||||||||||||||| | |||||||||| || |||||||||||  |||  || ||||||||  ||||||| |||       
T  7452814 taggagggttggagatggttctgatacgttgttttggtatgataggtggttaggggatgttcctttctgtgtccgttttcgtagactgtttgagttaacg 7452715  T
Q  253 gagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggaga 352  Q
    ||||| ||    || ||||||||  |  |||||||| ||| | ||||||||   |||| ||  ||||||||||||||||| |||||| | |||||||||     
T  7452714 gagaataagcttatgtctgtggcagacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtgggaggagg 7452615  T
Q  353 ctttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacagatgg 420  Q
      ||||||||||||  |||||||||||| | |||||||   ||||| || ||||||||||| ||||||    
T  7452614 tgttattagaggagtgtagggctttacttcttgatgttctcttgtttccgaatgtttcagatagatgg 7452547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 4987603 - 4987692
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggt-ggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||||| || | | ||||||||||||| |||||||| ||||||||||||||||||||||||||  |||||||||    
T  4987603 gttttagtcgcccgttatggcgaggt-gtgtggaggttggaggttggggggccagagttgttcttcttggtggcgggaggtggggaggatt 4987692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 745 - 865
Target Start/End: Complemental strand, 27083485 - 27083364
Alignment:
Q  745 ggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggtaaagctaaacattcctttctacag-taatctggattc 843  Q
    ||||||||| |||||||| || | |||||||||||||||||||||||| || ||||||||||||||||||||| ||| || || ||| |||| ||  | |    
T  27083485 ggggtggattctaataatatttccgatcatttggtgcagtttacttatatgacaggtgttggtaaagctaaacgttcgttcctgcagctaatttgactac 27083386  T
Q  844 tttgtacttggattgtgtggaa 865  Q
    | ||||||||| ||||||||||    
T  27083385 tgtgtacttgggttgtgtggaa 27083364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 413
Target Start/End: Original strand, 11394180 - 11394286
Alignment:
Q  307 ggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatg 406  Q
    ||||| |||||||| |||||||| ||||||||||  |||||||||  |||||||||||||  |||||| ||||||| ||| |||| |||||| ||||||     
T  11394180 ggggaggggtggagttggaggcggaggttgtgggcgtgggaggaggttttattagaggagtgtagggccttactgcttgaagtttttttgtttcctaata 11394279  T
Q  407 tttcaga 413  Q
    |||||||    
T  11394280 tttcaga 11394286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 316 - 413
Target Start/End: Complemental strand, 24794050 - 24793953
Alignment:
Q  316 tggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcaga 413  Q
    |||||| ||||||| ||||||||||  |||||||||  |||||||||||||  ||| || ||||||| ||||||||||||||| |||||| |||||||    
T  24794050 tggaggcggaggcggaggttgtgggcgtgggaggaggttttattagaggagtgtagagcattactgcttgatgtttctttgtttcctaatatttcaga 24793953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 263
Target Start/End: Complemental strand, 7556005 - 7555817
Alignment:
Q  67 agttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtggggg 166  Q
    |||||||||||||||||||| |||| |||||||||  |||| || ||||| ||||  |||||        | ||||| || ||| | ||||||||||| |    
T  7556005 agttgttcttcttggtggcgagaggtagggaggatccgtgatggtgttggcgatgatggggg--------taggtgacagtgtgttgaggaaggtgggag 7555914  T
Q  167 atggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaac 263  Q
    |||| ||| |||| || |||||||  ||||| ||| |||||| |  |||  ||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  7555913 atggggctaatacattattttggttgcatagatggattggtggttctccccttagttagcggtttcgtaggttgttcgacttagctgagaacaaaac 7555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 709 - 816
Target Start/End: Complemental strand, 40467732 - 40467625
Alignment:
Q  709 ttgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggta 808  Q
    |||||||| ||||||||| ||||| | |||||| | ||||||||  |||||| | || | ||||||||||||||||||||| || ||  |||||||||||    
T  40467732 ttgtggcaacaggtgcgcgattggattggttttcttggggtggactctaatattattgcagatcatttggtgcagtttactcatatgataggtgttggta 40467633  T
Q  809 aagctaaa 816  Q
    ||||||||    
T  40467632 aagctaaa 40467625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 816
Target Start/End: Complemental strand, 23942223 - 23942116
Alignment:
Q  709 ttgtggcagcaggtgcgcaattggctaggttttatgggggtggatcctaataatcttcctgatcatttggtgcagtttacttatttggcaggtgttggta 808  Q
    ||||||||  |||||||| ||||| | || ||| | ||||||||  |||||| | || | ||||||||||||||||||||| || || ||||||||||||    
T  23942223 ttgtggcaataggtgcgcgattggattgggtttcttggggtggactctaatattattgcagatcatttggtgcagtttactcatatgacaggtgttggta 23942124  T
Q  809 aagctaaa 816  Q
    ||||||||    
T  23942123 aagctaaa 23942116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 398
Target Start/End: Original strand, 43253403 - 43253648
Alignment:
Q  153 taggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagtt 252  Q
    |||||||||||| |||||| |||||||||||||||||| |||  |||| | ||| || |  ||| |||| |||| |||||  ||||||||||| |||| |    
T  43253403 taggaaggtgggtgatggtactgatacgttgttttggtttcactggtgatgtggagaggcgcctcttagagagcagtttcccaggttgtttgatttagct 43253502  T
Q  253 g-agaacaaaaccatttctgtggcgaatatgttctctcttg-gtctggagcagggaggggatgggtggaggtggaggcgtaggttgtgggattgggagga 350  Q
    | |||| |||   ||| ||||||| || ||||| || |||| |  ||| || ||| ||||| ||||||||  ||||||| ||||||||||  ||||||||    
T  43253503 gtagaa-aaatatattactgtggctaacatgttgtc-cttgaggttggcgcggggtggggaggggtggagtcggaggcggaggttgtgggcgtgggagga 43253600  T
Q  351 gactttattagaggagcttagggctttactgcgtgatgtttctttgtt 398  Q
    || | | |||||||||  |||| ||||||||| |||||||||| ||||    
T  43253601 gattgtcttagaggagtgtaggactttactgcttgatgtttctctgtt 43253648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 215 - 438
Target Start/End: Complemental strand, 23680562 - 23680339
Alignment:
Q  215 cttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgg 314  Q
    ||||| |||||||||||| ||||||||| ||  |   |||||||||| ||||||  |||||   | |||||||||||||| | |||| ||| ||||| |     
T  23680562 cttttcgtgagcggtttcctaggttgttcgatctttctgagaacaaatccattttagtggcaggtctgttctctcttggtgttgagcggggtggggaggc 23680463  T
Q  315 gtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagac 414  Q
    ||||| ||||||| |  ||||||||| ||||||||||      |||||||||  |||||||||| ||  ||||||||||||| |   |  ||||||||||    
T  23680462 gtggaagtggaggagggggttgtgggtttgggaggaggaggagttagaggagtgtagggctttattgactgatgtttctttgctagattctgtttcagac 23680363  T
Q  415 agatggttgtggttacctgaccct 438  Q
    || ||| ||||||| || ||||||    
T  23680362 aggtgggtgtggttgccagaccct 23680339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 43249363 - 43249468
Alignment:
Q  45 gaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttggtgatgtagggggcggttggtttggtgat 144  Q
    |||||| ||||| ||||||||||||||||||| ||||||| ||| ||  ||||||||| | || || | |||||  ||||||||  ||||||||||||||    
T  43249363 gaggttagaggttgggggccggagttgttctttttggtggaggg-ggtggggaggattagagatggtgatggtggagtagggggtagttggtttggtgat 43249461  T
Q  145 agagtgc 151  Q
    || ||||    
T  43249462 agtgtgc 43249468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 767 - 811
Target Start/End: Complemental strand, 30501816 - 30501772
Alignment:
Q  767 ctgatcatttggtgcagtttacttatttggcaggtgttggtaaag 811  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||    
T  30501816 ctgatcatttggtgcagtttactcatatggtaggtgttggtaaag 30501772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 23942409 - 23942351
Alignment:
Q  523 tggcatcatcaggtccccttgaaggtctcgatttttgcttggagacttcttcgggatcg 581  Q
    ||||||||||| || || |||||||||||  ||||||||||||| ||| ||||||||||    
T  23942409 tggcatcatcaagttcctttgaaggtctcagtttttgcttggaggcttattcgggatcg 23942351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 358 - 440
Target Start/End: Complemental strand, 36157414 - 36157332
Alignment:
Q  358 ttagaggagcttagggctttactgcgtgatgtttctttgttgcctaatgtttcagacagatggttgtggttacctgacccttc 440  Q
    |||||||||  |||| ||||||||| ||||||||||||||   ||||| |||||||||  ||| | |||||||| ||||||||    
T  36157414 ttagaggagtgtaggactttactgcttgatgtttctttgtatgctaatatttcagacaagtgggtttggttaccggacccttc 36157332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0912 (Bit Score: 78; Significance: 7e-36; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 16 - 345
Target Start/End: Original strand, 2414 - 2743
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||| | || || |  |    
T  2414 ttagtcgcccgttatggcgaagtgggtgggaggttggaggttgggggccggagttgttcttcttggtggcgggaggtagggcggattagagatgggggag 2513  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcc 215  Q
    |||||   || || || |||||||| ||  | |||  || |||| ||||||||||| | || |||||||| |||| | ||| |||||| ||    ||  |    
T  2514 gtgattatggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggttcagacacgttgttctggtatgataagtggttaggatcagtctc 2613  T
Q  216 ttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatggg 315  Q
    |||| |||||||||||| ||||||||||||  |   |||||||||| ||||||| |||||   | |||||||||||||| | |||| ||| ||||| | |    
T  2614 tttttgtgagcggtttcctaggttgtttgatgtttctgagaacaaatccatttcagtggcaggtttgttctctcttggtgttgagcggggtggggaggcg 2713  T
Q  316 tggaggtggaggcgtaggttgtgggattgg 345  Q
    |||  ||||||| | |||||||||| ||||    
T  2714 tgggagtggaggaggaggttgtgggcttgg 2743  T

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Target: scaffold0007 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 182712 - 182628
Alignment:
Q  18 agtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatt 102  Q
    ||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||||| |||| |||||    
T  182712 agtcgcccgttatggcgaagtgggtgggaggttggagtttgggggccggagttgttcttcttggtggcgggaggtagggcggatt 182628  T

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Target: scaffold0179 (Bit Score: 60; Significance: 4e-25; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 16 - 351
Target Start/End: Complemental strand, 8131 - 7792
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggaggatttgtgaaggcgttg 115  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||  ||| ||||| | || || |  |    
T  8131 ttagtcgcccgttatgacgaagtaggtgggaggttggaggttgggggccggagttgttcgtcttggtggagggaggtggggcggattagagatgggggag 8032  T
Q  116 gtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctca----taggtggtttggtgatg 211  Q
    ||||||| || || || || ||||| ||  | |||  || |||| ||||||||||| | || || |||||||||| | |    || |||||| ||    |    
T  8031 gtgatgttggtggtggctgatttggggagtgtgtgtctaagaagttgggggatggttcagacactttgttttggtttgataattaagtggttagggtcgg 7932  T
Q  212 ttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggc-gaatatgttctctcttggtctggagcagggagggg 310  Q
    || ||||  |||||||||||| ||||||||||||  | | |||||||||| | ||| | ||||| | || | |||||||||||| | |||||||| ||||    
T  7931 tttctttgtgtgagcggtttcctaggttgtttgatcttgctgagaacaaatctattacggtggcaggat-ttttctctcttggtgttgagcagggtgggg 7833  T
Q  311 atgggtggaggtggaggcgtaggttgtgggattgggaggag 351  Q
    | | ||||||||||||| | ||||||||||  |||||||||    
T  7832 aggcgtggaggtggaggaggaggttgtgggcatgggaggag 7792  T

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Target: scaffold0179; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 13065 - 12990
Alignment:
Q  16 ttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  13065 ttagtcgcccgttatgacgaagtaggtgggaggttggaggttgggggccggagttgttcgtcttggtggagggagg 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 15177 - 15555
Alignment:
Q  1 ttgtggtatcatgttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggaggcagggagga 100  Q
    |||||||| |||||||||||| |||||| |||||||||||| ||||||  |||||||||||||||||||  ||||||||||||||| ||   ||| ||||    
T  15177 ttgtggtaccatgttttagtctcccgtt-tggcgaagtaggtgggaggaaggaggtggggggccggagtgtttcttcttggtggcgtgatttaggtagga 15275  T
Q  101 tttgtgaaggcgttggtgatgtagggggcggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtg 200  Q
     |  |||||| | ||||||    || || || ||||| | | | || ||  |  |||||||||| ||||| ||||| || || |||||||| ||||||||    
T  15276 ctcttgaaggagatggtgagtctggtggtgggtggttcgatcacagtgttatccggaaggtgggtgatggggctgaaacttttttttggtcacataggtg 15375  T
Q  201 gtttggtgatgttccttttagtgagcggtttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggag 300  Q
    | |||||| | | |   |||||| |||||||||| | ||||||||||| |  ||||||||||| ||| | ||||| ||  | ||||| || ||||||| |    
T  15376 gattggtggtatcctgcttagtgtgcggtttcgtcgattgtttgacttggcagagaacaaaacgattacggtggctaactttttctcgctgggtctggcg 15475  T
Q  301 cagggaggggatgggtggaggtggaggcgtaggttgtgggattgggaggagactttattagaggagcttagggctttact 380  Q
    | |  |||||| |||||||||||| | || || |||||||  |||||||||  | | |||||||||  ||||||||||||    
T  15476 cggcaaggggaggggtggaggtggcgtcgcagattgtgggcgtgggaggaggatatgttagaggagtgtagggctttact 15555  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 366
Target Start/End: Complemental strand, 42515 - 42387
Alignment:
Q  238 ttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcgtaggttgt 337  Q
    |||||||||||||  ||||| ||||||||| | |||||   | |||||||| | |||  ||||||||  |||||  ||||||| ||||||||||| ||||    
T  42515 ttgtttgacttagcagagaataaaaccattacggtggcctctttgttctctttgggtacggagcaggatggggagaggtggagttggaggcgtagattgt 42416  T
Q  338 gggattgggaggagactttattagaggag 366  Q
    ||| ||||||||||  |||| ||||||||    
T  42415 gggcttgggaggagcttttactagaggag 42387  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 390
Target Start/End: Original strand, 134509 - 134769
Alignment:
Q  130 ggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggt 229  Q
    |||||||||||||||   |||  ||||| ||| || ||||| ||| |||||||||||||||   |||||||||| || |||||||||||| |||  || |    
T  134509 ggttggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtt 134608  T
Q  230 ttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcg 329  Q
    | |||||| ||||||| |||   ||||| ||    || ||||||||  |  |||| ||| ||| |  ||||||| | |||| |  |||||||||||| ||    
T  134609 tccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacg 134708  T
Q  330 taggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtt 390  Q
    |||||||||| | |||||||||   || |||| ||||  |||||||||||| | |||||||    
T  134709 taggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtt 134769  T

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Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 134392 - 134470
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||| ||| | ||||||||| |||| || ||||||||||| ||||||||||||  ||| | ||||||| ||||||    
T  134392 gttttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcatgttggtggagggagg 134470  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000005; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 390
Target Start/End: Original strand, 312336 - 312596
Alignment:
Q  130 ggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggt 229  Q
    |||||||||||||||   |||  ||||| ||| || ||||| ||| |||||||||||||||   |||||||||| || |||||||||||| |||  || |    
T  312336 ggttggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtt 312435  T
Q  230 ttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcg 329  Q
    | |||||| ||||||| |||   ||||| ||    || ||||||||  |  |||| ||| ||| |  ||||||| | |||| |  |||||||||||| ||    
T  312436 tccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacg 312535  T
Q  330 taggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtt 390  Q
    |||||||||| | |||||||||   || |||| ||||  |||||||||||| | |||||||    
T  312536 taggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtt 312596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 390
Target Start/End: Original strand, 327790 - 328050
Alignment:
Q  130 ggttggtttggtgatagagtgcttaggaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggt 229  Q
    |||||||||||||||   |||  ||||| ||| || ||||| ||| |||||||||||||||   |||||||||| || |||||||||||| |||  || |    
T  327790 ggttggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtt 327889  T
Q  230 ttcgtaggttgtttgacttagttgagaacaaaaccatttctgtggcgaatatgttctctcttggtctggagcagggaggggatgggtggaggtggaggcg 329  Q
    | |||||| ||||||| |||   ||||| ||    || ||||||||  |  |||| ||| ||| |  ||||||| | |||| |  |||||||||||| ||    
T  327890 tccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacg 327989  T
Q  330 taggttgtgggattgggaggagactttattagaggagcttagggctttactgcgtgatgtt 390  Q
    |||||||||| | |||||||||   || |||| ||||  |||||||||||| | |||||||    
T  327990 taggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtt 328050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 312219 - 312297
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||| ||| | ||||||||| |||| || ||||||||||| ||||||||||||  ||| | ||||||| ||||||    
T  312219 gttttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcatgttggtggagggagg 312297  T

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Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 327673 - 327751
Alignment:
Q  13 gttttagtcgcccgttatggcgaagtaggggggaggttggaggtggggggccggagttgttcttcttggtggcgggagg 91  Q
    |||||||| ||| | ||||||||| |||| || ||||||||||| ||||||||||||  ||| | ||||||| ||||||    
T  327673 gttttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcatgttggtggagggagg 327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 4240 - 4319
Alignment:
Q  166 gatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttga 245  Q
    ||||| ||| |||||||||||||||   |||||||||| || |||||||||||| |||  || ||||||||| |||||||    
T  4240 gatggagctcatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttga 4319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 67652 - 67606
Alignment:
Q  43 gggaggttggaggtggggggccggagttgttcttcttggtggcggga 89  Q
    |||||||||||||| |||||| ||||| |||||||||||||| ||||    
T  67652 gggaggttggaggttgggggctggagtggttcttcttggtggtggga 67606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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