View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12942_low_42 (Length: 374)

Name: NF12942_low_42
Description: NF12942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12942_low_42
NF12942_low_42
[»] chr3 (53 HSPs)
chr3 (144-314)||(2571257-2571427)
chr3 (151-314)||(12515493-12515656)
chr3 (152-314)||(10307763-10307925)
chr3 (168-314)||(46492362-46492509)
chr3 (154-314)||(11610913-11611073)
chr3 (154-314)||(51618048-51618206)
chr3 (154-314)||(13495292-13495453)
chr3 (168-314)||(2379091-2379235)
chr3 (152-314)||(23638068-23638231)
chr3 (146-314)||(20938047-20938216)
chr3 (154-314)||(3863328-3863488)
chr3 (158-230)||(37444149-37444221)
chr3 (151-314)||(54527725-54527889)
chr3 (240-311)||(26291253-26291324)
chr3 (155-313)||(50364190-50364348)
chr3 (148-314)||(42180044-42180211)
chr3 (153-314)||(38389444-38389606)
chr3 (154-314)||(50204401-50204562)
chr3 (154-251)||(47386920-47387019)
chr3 (157-232)||(51339284-51339360)
chr3 (200-314)||(23803065-23803180)
chr3 (153-234)||(46845539-46845621)
chr3 (148-313)||(54621239-54621403)
chr3 (156-308)||(1569215-1569368)
chr3 (154-314)||(37055385-37055546)
chr3 (181-314)||(40497073-40497206)
chr3 (176-314)||(9710964-9711103)
chr3 (150-232)||(32553361-32553444)
chr3 (148-314)||(8165638-8165805)
chr3 (183-314)||(16875044-16875175)
chr3 (239-314)||(35414828-35414903)
chr3 (154-234)||(30214109-30214189)
chr3 (154-314)||(51567839-51567998)
chr3 (172-220)||(35094972-35095020)
chr3 (155-207)||(39365258-39365310)
chr3 (195-314)||(51401479-51401599)
chr3 (168-313)||(54026952-54027096)
chr3 (193-315)||(38786342-38786463)
chr3 (154-207)||(29685884-29685937)
chr3 (249-314)||(31318735-31318800)
chr3 (200-304)||(38785924-38786029)
chr3 (156-207)||(43750052-43750103)
chr3 (157-210)||(26291197-26291251)
chr3 (258-312)||(27300507-27300561)
chr3 (268-314)||(48776887-48776933)
chr3 (253-314)||(2566580-2566641)
chr3 (222-311)||(26499637-26499725)
chr3 (156-263)||(48240163-48240266)
chr3 (155-234)||(24086983-24087063)
chr3 (155-207)||(27549537-27549589)
chr3 (156-216)||(35415139-35415199)
chr3 (278-314)||(36812381-36812417)
chr3 (270-314)||(38277448-38277492)
[»] chr2 (54 HSPs)
chr2 (152-314)||(5583577-5583739)
chr2 (147-314)||(7757805-7757972)
chr2 (173-314)||(38248439-38248579)
chr2 (154-314)||(19228424-19228584)
chr2 (154-314)||(34213968-34214131)
chr2 (154-314)||(15411641-15411802)
chr2 (150-314)||(27665063-27665227)
chr2 (143-232)||(39904148-39904238)
chr2 (193-306)||(11660946-11661059)
chr2 (186-314)||(24729596-24729725)
chr2 (143-304)||(26229883-26230043)
chr2 (170-314)||(40562096-40562241)
chr2 (153-314)||(16919173-16919334)
chr2 (154-314)||(12016665-12016825)
chr2 (154-314)||(16126578-16126738)
chr2 (151-314)||(22705450-22705613)
chr2 (152-314)||(14377421-14377583)
chr2 (149-314)||(13351230-13351396)
chr2 (244-314)||(29157848-29157918)
chr2 (152-314)||(9747313-9747476)
chr2 (153-314)||(20566036-20566198)
chr2 (151-314)||(23932560-23932724)
chr2 (154-314)||(43806358-43806519)
chr2 (242-314)||(17234957-17235029)
chr2 (165-314)||(16123288-16123437)
chr2 (147-261)||(34817535-34817649)
chr2 (163-311)||(9450264-9450413)
chr2 (173-230)||(22162180-22162237)
chr2 (154-234)||(43388865-43388946)
chr2 (153-232)||(10690780-10690860)
chr2 (259-314)||(17265508-17265563)
chr2 (157-314)||(7720116-7720274)
chr2 (157-314)||(25998021-25998179)
chr2 (154-307)||(36612757-36612911)
chr2 (154-307)||(36620608-36620762)
chr2 (177-314)||(25948058-25948198)
chr2 (148-189)||(35729108-35729149)
chr2 (156-314)||(37471759-37471920)
chr2 (196-260)||(40503054-40503119)
chr2 (156-220)||(4579902-4579966)
chr2 (193-295)||(2051651-2051754)
chr2 (153-314)||(4821280-4821435)
chr2 (157-314)||(12919369-12919528)
chr2 (150-213)||(26003612-26003675)
chr2 (154-200)||(29795056-29795102)
chr2 (177-314)||(5853482-5853622)
chr2 (153-234)||(12438747-12438828)
chr2 (177-314)||(16493551-16493691)
chr2 (209-314)||(2544228-2544333)
chr2 (177-314)||(22704556-22704696)
chr2 (151-220)||(43941967-43942036)
chr2 (152-189)||(44023220-44023257)
chr2 (270-310)||(39607431-39607471)
chr2 (157-262)||(45302340-45302447)
[»] chr5 (47 HSPs)
chr5 (154-314)||(30839780-30839940)
chr5 (154-314)||(36597578-36597738)
chr5 (155-314)||(40512951-40513110)
chr5 (183-314)||(6863584-6863715)
chr5 (154-314)||(2795522-2795682)
chr5 (152-314)||(8103599-8103761)
chr5 (150-314)||(24014707-24014871)
chr5 (154-312)||(10664986-10665144)
chr5 (151-314)||(34578007-34578170)
chr5 (154-314)||(35469551-35469713)
chr5 (154-314)||(30328346-30328506)
chr5 (154-294)||(11249996-11250136)
chr5 (154-314)||(31365969-31366131)
chr5 (153-314)||(15190870-15191032)
chr5 (153-314)||(3398217-3398379)
chr5 (154-314)||(11636730-11636890)
chr5 (156-314)||(12642012-12642170)
chr5 (157-311)||(9184209-9184363)
chr5 (155-314)||(4047412-4047571)
chr5 (197-307)||(18150454-18150566)
chr5 (152-314)||(18841724-18841887)
chr5 (323-374)||(41791714-41791765)
chr5 (157-314)||(32020003-32020161)
chr5 (154-230)||(5958226-5958303)
chr5 (206-306)||(40166332-40166433)
chr5 (168-234)||(11375972-11376039)
chr5 (151-314)||(23995435-23995604)
chr5 (155-311)||(24329657-24329813)
chr5 (270-314)||(30893469-30893513)
chr5 (152-288)||(315338-315476)
chr5 (157-207)||(11692758-11692808)
chr5 (244-288)||(3936191-3936235)
chr5 (278-314)||(30893752-30893788)
chr5 (218-314)||(41350266-41350361)
chr5 (154-189)||(14466634-14466669)
chr5 (153-200)||(15241226-15241273)
chr5 (154-213)||(18150377-18150436)
chr5 (150-204)||(13516055-13516109)
chr5 (193-314)||(16174641-16174762)
chr5 (156-206)||(33072677-33072727)
chr5 (157-234)||(3737975-3738052)
chr5 (150-234)||(8716061-8716143)
chr5 (154-234)||(26376668-26376749)
chr5 (157-202)||(28378711-28378756)
chr5 (140-220)||(13761655-13761735)
chr5 (149-217)||(31705047-31705114)
chr5 (153-213)||(40166249-40166309)
[»] chr7 (43 HSPs)
chr7 (152-314)||(46290007-46290169)
chr7 (154-314)||(33342987-33343147)
chr7 (154-314)||(34270264-34270420)
chr7 (154-314)||(9331960-9332120)
chr7 (154-314)||(19889339-19889499)
chr7 (226-314)||(33072052-33072140)
chr7 (156-314)||(39757129-39757287)
chr7 (154-314)||(23982774-23982935)
chr7 (158-314)||(7170005-7170161)
chr7 (176-314)||(8091331-8091470)
chr7 (149-314)||(24462974-24463139)
chr7 (143-295)||(47120232-47120384)
chr7 (151-298)||(19868109-19868257)
chr7 (156-314)||(25709418-25709577)
chr7 (148-314)||(45501451-45501618)
chr7 (156-314)||(26300573-26300730)
chr7 (157-314)||(36548479-36548636)
chr7 (154-314)||(5909301-5909461)
chr7 (157-314)||(3561897-3562054)
chr7 (157-314)||(47457480-47457638)
chr7 (155-314)||(12085950-12086109)
chr7 (154-314)||(4969771-4969932)
chr7 (154-234)||(24250312-24250393)
chr7 (154-312)||(12650819-12650977)
chr7 (222-312)||(41572286-41572372)
chr7 (154-314)||(7040271-7040431)
chr7 (154-314)||(32117813-32117973)
chr7 (194-306)||(47707911-47708024)
chr7 (192-314)||(384449-384571)
chr7 (145-220)||(39869112-39869187)
chr7 (143-213)||(4161869-4161939)
chr7 (156-234)||(42750289-42750367)
chr7 (154-314)||(12624636-12624795)
chr7 (249-314)||(29398153-29398218)
chr7 (249-314)||(41331475-41331540)
chr7 (242-314)||(7899505-7899577)
chr7 (148-232)||(24639535-24639619)
chr7 (152-189)||(27696703-27696740)
chr7 (151-220)||(38798321-38798390)
chr7 (266-314)||(26037204-26037252)
chr7 (278-314)||(26050480-26050516)
chr7 (278-314)||(26059839-26059875)
chr7 (152-220)||(28061436-28061504)
[»] chr6 (41 HSPs)
chr6 (153-314)||(28943788-28943949)
chr6 (154-314)||(14228145-14228305)
chr6 (154-314)||(17552606-17552766)
chr6 (154-314)||(33017723-33017883)
chr6 (177-314)||(30591182-30591320)
chr6 (151-314)||(10887024-10887188)
chr6 (153-314)||(8977485-8977647)
chr6 (156-313)||(28757506-28757664)
chr6 (177-314)||(31069601-31069738)
chr6 (155-220)||(5363006-5363071)
chr6 (175-303)||(22974603-22974731)
chr6 (175-303)||(23813670-23813798)
chr6 (154-314)||(34692352-34692513)
chr6 (148-314)||(6016848-6017015)
chr6 (157-314)||(2830700-2830857)
chr6 (154-314)||(28759033-28759194)
chr6 (239-314)||(28756564-28756639)
chr6 (154-220)||(18332802-18332868)
chr6 (157-314)||(31169782-31169940)
chr6 (154-314)||(29863321-29863482)
chr6 (154-306)||(30623324-30623477)
chr6 (155-235)||(1814880-1814960)
chr6 (148-212)||(26602552-26602616)
chr6 (156-314)||(1017797-1017956)
chr6 (154-220)||(31791029-31791096)
chr6 (156-314)||(12454066-12454224)
chr6 (151-314)||(31503738-31503901)
chr6 (158-213)||(17596315-17596370)
chr6 (171-221)||(2086948-2086998)
chr6 (154-314)||(31568111-31568268)
chr6 (152-202)||(10345671-10345721)
chr6 (273-313)||(1814532-1814572)
chr6 (278-314)||(3853066-3853102)
chr6 (148-314)||(17154614-17154782)
chr6 (226-314)||(23936395-23936483)
chr6 (156-203)||(32615593-32615640)
chr6 (237-319)||(10671609-10671691)
chr6 (154-220)||(24979263-24979329)
chr6 (151-197)||(34243298-34243344)
chr6 (155-188)||(2086999-2087032)
chr6 (261-314)||(3261184-3261237)
[»] chr8 (61 HSPs)
chr8 (154-314)||(2161386-2161546)
chr8 (154-314)||(3306074-3306234)
chr8 (161-314)||(26364009-26364162)
chr8 (152-312)||(12131979-12132140)
chr8 (156-314)||(26682068-26682227)
chr8 (154-314)||(13327960-13328120)
chr8 (152-314)||(10129100-10129262)
chr8 (153-314)||(7140478-7140639)
chr8 (154-314)||(14816145-14816305)
chr8 (154-314)||(14829435-14829595)
chr8 (154-314)||(20514630-20514792)
chr8 (154-314)||(36967089-36967250)
chr8 (149-307)||(9743855-9744013)
chr8 (156-314)||(35678294-35678452)
chr8 (153-314)||(4080413-4080574)
chr8 (157-314)||(39701822-39701979)
chr8 (149-314)||(40210840-40211005)
chr8 (151-314)||(31812108-31812272)
chr8 (152-314)||(45005966-45006128)
chr8 (153-314)||(4084562-4084723)
chr8 (153-314)||(4102869-4103030)
chr8 (154-314)||(19343855-19344016)
chr8 (146-220)||(38527811-38527885)
chr8 (154-314)||(38843702-38843863)
chr8 (168-314)||(9801681-9801827)
chr8 (140-314)||(26834545-26834720)
chr8 (157-212)||(39703455-39703510)
chr8 (149-314)||(6818010-6818176)
chr8 (249-314)||(15198919-15198984)
chr8 (239-314)||(297179-297254)
chr8 (153-216)||(8284687-8284750)
chr8 (152-287)||(11117051-11117179)
chr8 (154-220)||(33514614-33514680)
chr8 (155-220)||(7750667-7750732)
chr8 (197-314)||(44091360-44091477)
chr8 (152-314)||(9580128-9580291)
chr8 (152-314)||(12189607-12189770)
chr8 (152-314)||(12434035-12434198)
chr8 (158-314)||(28014877-28015032)
chr8 (225-314)||(7393264-7393352)
chr8 (143-220)||(10543742-10543819)
chr8 (180-314)||(5573312-5573445)
chr8 (144-200)||(13496866-13496922)
chr8 (158-314)||(27874700-27874855)
chr8 (178-314)||(39024876-39025012)
chr8 (146-189)||(11923005-11923048)
chr8 (183-234)||(45516316-45516367)
chr8 (211-309)||(35583423-35583520)
chr8 (193-314)||(39430522-39430645)
chr8 (177-314)||(40226006-40226146)
chr8 (153-202)||(43717684-43717733)
chr8 (156-220)||(1203602-1203666)
chr8 (266-314)||(14961682-14961730)
chr8 (154-202)||(40716273-40716321)
chr8 (153-216)||(16832435-16832498)
chr8 (154-232)||(35745989-35746068)
chr8 (149-220)||(42781589-42781659)
chr8 (154-220)||(9824957-9825023)
chr8 (156-234)||(44222533-44222611)
chr8 (269-314)||(18567435-18567480)
chr8 (266-314)||(6141759-6141807)
[»] chr4 (68 HSPs)
chr4 (154-314)||(50352301-50352461)
chr4 (155-314)||(9759161-9759320)
chr4 (169-314)||(39876844-39876989)
chr4 (148-314)||(40049551-40049717)
chr4 (152-314)||(34941274-34941437)
chr4 (157-314)||(51691343-51691500)
chr4 (223-314)||(10658436-10658527)
chr4 (223-314)||(10872581-10872672)
chr4 (153-235)||(10658542-10658624)
chr4 (153-235)||(10872687-10872769)
chr4 (152-314)||(2096867-2097030)
chr4 (145-314)||(23545465-23545635)
chr4 (158-314)||(19450919-19451076)
chr4 (154-314)||(52391296-52391457)
chr4 (155-314)||(19468193-19468353)
chr4 (153-314)||(17409821-17409983)
chr4 (154-314)||(8736830-8736990)
chr4 (154-314)||(24684834-24684996)
chr4 (168-314)||(29190835-29190981)
chr4 (140-314)||(54495656-54495831)
chr4 (176-305)||(13009783-13009913)
chr4 (154-220)||(49228355-49228421)
chr4 (154-314)||(7349687-7349847)
chr4 (154-314)||(16667403-16667564)
chr4 (154-314)||(27019258-27019419)
chr4 (158-314)||(49181074-49181231)
chr4 (143-314)||(47326911-47327083)
chr4 (143-314)||(47341707-47341879)
chr4 (151-232)||(36000040-36000122)
chr4 (155-232)||(49650210-49650288)
chr4 (157-232)||(23553571-23553648)
chr4 (155-314)||(10389287-10389446)
chr4 (152-203)||(48910965-48911016)
chr4 (154-220)||(49332331-49332397)
chr4 (218-314)||(55813927-55814023)
chr4 (151-314)||(19838710-19838872)
chr4 (154-314)||(27362389-27362550)
chr4 (170-233)||(10813594-10813658)
chr4 (154-206)||(36968286-36968338)
chr4 (278-314)||(40682555-40682591)
chr4 (203-314)||(1378066-1378177)
chr4 (168-306)||(27756574-27756712)
chr4 (142-220)||(9326983-9327061)
chr4 (142-220)||(9373705-9373783)
chr4 (249-314)||(18882286-18882351)
chr4 (154-206)||(1377452-1377504)
chr4 (152-220)||(3085348-3085416)
chr4 (156-263)||(6875501-6875609)
chr4 (148-220)||(9382017-9382089)
chr4 (156-220)||(25843291-25843355)
chr4 (168-220)||(40681961-40682013)
chr4 (187-314)||(41415576-41415703)
chr4 (140-219)||(45742351-45742431)
chr4 (183-314)||(53961350-53961481)
chr4 (154-188)||(9971710-9971744)
chr4 (157-314)||(33632222-33632379)
chr4 (150-220)||(41887682-41887752)
chr4 (151-220)||(32459327-32459396)
chr4 (188-232)||(48910902-48910947)
chr4 (239-304)||(51070425-51070490)
chr4 (144-189)||(53376558-53376603)
chr4 (278-314)||(23051401-23051437)
chr4 (278-314)||(23438278-23438314)
chr4 (274-314)||(32279190-32279230)
chr4 (279-307)||(36971398-36971426)
chr4 (278-314)||(41488737-41488773)
chr4 (144-255)||(42480000-42480112)
chr4 (266-314)||(49228765-49228813)
[»] chr1 (54 HSPs)
chr1 (154-314)||(1502739-1502899)
chr1 (153-314)||(23576433-23576594)
chr1 (156-303)||(3121119-3121266)
chr1 (154-314)||(23591696-23591857)
chr1 (172-314)||(36490795-36490938)
chr1 (155-314)||(44918024-44918183)
chr1 (154-314)||(313748-313908)
chr1 (154-314)||(39150346-39150506)
chr1 (158-314)||(6754474-6754630)
chr1 (155-314)||(47355397-47355556)
chr1 (154-314)||(17919452-17919612)
chr1 (151-314)||(41624825-41624988)
chr1 (143-314)||(22167322-22167494)
chr1 (154-233)||(51382370-51382450)
chr1 (153-314)||(30171876-30172038)
chr1 (153-314)||(30187417-30187579)
chr1 (168-314)||(7520016-7520163)
chr1 (168-314)||(25465171-25465317)
chr1 (154-299)||(34050317-34050463)
chr1 (154-314)||(30363014-30363175)
chr1 (157-232)||(8062206-8062282)
chr1 (151-314)||(35512720-35512884)
chr1 (152-314)||(6180182-6180345)
chr1 (88-151)||(12019672-12019739)
chr1 (154-220)||(34801966-34802032)
chr1 (154-314)||(6307501-6307661)
chr1 (154-314)||(13321874-13322035)
chr1 (156-314)||(29635767-29635926)
chr1 (151-301)||(39627603-39627754)
chr1 (152-314)||(23808431-23808593)
chr1 (154-314)||(38812738-38812899)
chr1 (151-314)||(7824877-7825041)
chr1 (157-232)||(32716263-32716339)
chr1 (200-308)||(19277832-19277934)
chr1 (153-234)||(22331620-22331702)
chr1 (156-234)||(43317490-43317568)
chr1 (249-314)||(1366141-1366206)
chr1 (155-311)||(21854139-21854295)
chr1 (156-314)||(23378521-23378682)
chr1 (223-313)||(52337834-52337924)
chr1 (225-314)||(9516651-9516740)
chr1 (155-204)||(38539086-38539135)
chr1 (155-204)||(38561304-38561353)
chr1 (154-234)||(3168168-3168248)
chr1 (156-216)||(36578332-36578392)
chr1 (154-213)||(399543-399602)
chr1 (249-308)||(51467547-51467606)
chr1 (109-151)||(306396-306438)
chr1 (268-314)||(32201737-32201783)
chr1 (249-314)||(6570004-6570069)
chr1 (278-314)||(13241880-13241916)
chr1 (266-314)||(28016291-28016339)
chr1 (168-220)||(40799372-40799424)
chr1 (151-314)||(51920450-51920614)
[»] scaffold0061 (1 HSPs)
scaffold0061 (154-314)||(52798-52958)
[»] scaffold0017 (1 HSPs)
scaffold0017 (154-314)||(145676-145836)
[»] scaffold0036 (1 HSPs)
scaffold0036 (152-314)||(94037-94200)
[»] scaffold0011 (1 HSPs)
scaffold0011 (154-314)||(13084-13244)
[»] scaffold0111 (1 HSPs)
scaffold0111 (151-314)||(37133-37297)
[»] scaffold0727 (1 HSPs)
scaffold0727 (157-232)||(5692-5769)
[»] scaffold0618 (1 HSPs)
scaffold0618 (197-314)||(8433-8550)
[»] scaffold0073 (1 HSPs)
scaffold0073 (154-314)||(16554-16714)
[»] scaffold0305 (2 HSPs)
scaffold0305 (177-314)||(17807-17946)
scaffold0305 (177-314)||(18015-18153)
[»] scaffold0229 (1 HSPs)
scaffold0229 (249-314)||(24546-24611)
[»] scaffold0155 (1 HSPs)
scaffold0155 (175-314)||(3432-3572)
[»] scaffold0009 (2 HSPs)
scaffold0009 (171-261)||(43479-43568)
scaffold0009 (149-190)||(193376-193417)
[»] scaffold0129 (1 HSPs)
scaffold0129 (151-295)||(13696-13841)
[»] scaffold0192 (1 HSPs)
scaffold0192 (266-314)||(13582-13630)
[»] scaffold0631 (1 HSPs)
scaffold0631 (157-206)||(443-492)
[»] scaffold0128 (1 HSPs)
scaffold0128 (253-314)||(44313-44374)
[»] scaffold0018 (1 HSPs)
scaffold0018 (191-314)||(182079-182201)


Alignment Details
Target: chr3 (Bit Score: 139; Significance: 1e-72; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 144 - 314
Target Start/End: Original strand, 2571257 - 2571427
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagt 243  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  2571257 attatttattgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagt 2571356  T
Q  244 tatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2571357 tatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 2571427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 151 - 314
Target Start/End: Complemental strand, 12515656 - 12515493
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacat 250  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||||| ||    
T  12515656 tatgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattaaaaccaacaattatttaacaaaaagttatatat 12515557  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  12515556 ttaatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaat 12515493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 10307763 - 10307925
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||| |||    
T  10307763 atgggtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagttatatatt 10307862  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10307863 taatacaaaatgttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaat 10307925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 168 - 314
Target Start/End: Complemental strand, 46492509 - 46492362
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattc 266  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||||||  |||||||||||||  |   ||||||| |||||||||||||| | |    
T  46492509 tgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatatttaatacaaaatgtac 46492410  T
Q  267 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| |||||||||||||||| ||||||||||||||| |||| ||||    
T  46492409 aagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaat 46492362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 11610913 - 11611073
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | ||||    
T  11610913 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatattt 11611011  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  11611012 aatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 11611073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 51618048 - 51618206
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||||||||||||||||||   ||||||||| || ||||||||| |||||  |||||||||||||  | ||   |||| ||||    
T  51618048 gggtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa---tatatattt 51618144  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||| | ||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  51618145 aatacaaaatgtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaat 51618206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 13495292 - 13495453
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  | |||  || | ||||    
T  13495292 gggtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatattt 13495391  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||||   ||||||||||  |||| |||||| |||||| |||||| |||||||||||    
T  13495392 aatataaaatgcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaat 13495453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 168 - 314
Target Start/End: Complemental strand, 2379235 - 2379091
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattca 267  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||   ||||||||||||  | ||||| ||| ||| |||||||||||| ||    
T  2379235 tgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattgaat--aacaattatttattaaaaagtcatatattaaatacaaaatataca 2379138  T
Q  268 agttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||||||||||| || |||||||||| ||||||||| ||||    
T  2379137 agttttaatgcaaagttattagtttaaatttcctaacatgtgtaaat 2379091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 23638231 - 23638068
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| ||||||||||||  ||||||||| ||||| |||||||||| ||| ||||| ||| || ||||||||||| | |||||| || ||    
T  23638231 atgggtttgtctaacatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatttaataaaaagttgtatat 23638132  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| ||||||  |||||| |||  | || |||| |||||||||||||||||||||||||||    
T  23638131 ttaatataaaatacacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaat 23638068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 314
Target Start/End: Original strand, 20938047 - 20938216
Alignment:
Q  146 tattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagtt 244  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||||| |  | ||| ||    
T  20938047 tattttatgtgtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgatta-aaaatt 20938145  T
Q  245 atacatttaata-caaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | | ||||||||  |||| |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  20938146 acatatttaatataaaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 20938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 3863328 - 3863488
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||| |||||||| |  | |||| || | ||||    
T  3863328 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgatta-aaagctacatattt 3863426  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  3863427 aatataaaaaacacaagttccaagctaaagttactactttaaacttcttaacatgtgcaaat 3863488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 37444149 - 37444221
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaatta 230  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaatcaacaatta 37444221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 151 - 314
Target Start/End: Complemental strand, 54527889 - 54527725
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||| ||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || |    
T  54527889 tatgagtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttata 54527790  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  |||| | ||||||||||| |||| ||  ||||||||||||||||||||||||||||    
T  54527789 tttaatattaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaat 54527725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 26291253 - 26291324
Alignment:
Q  240 aagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 311  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  26291253 aagttatatatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcctaacatgtgca 26291324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 50364190 - 50364348
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||||| || | |||| ||| ||||||||||| |  | ||||||| | |||||    
T  50364190 ggtttgtctaacatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgatta-aaagttacatattta 50364288  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 313  Q
    ||| |||| |  ||||||||||  ||||||||||| |||||| |||||| ||||||||||    
T  50364289 atataaaaaacacaagttccaagtcaaagttactactttaaacttcttagcatgtgcaaa 50364348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 148 - 314
Target Start/End: Original strand, 42180044 - 42180211
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttat 246  Q
    ||||||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| | | |||||||||    |||||| |    
T  42180044 ttttatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagtttt 42180143  T
Q  247 acatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | ||||||||  |||| | ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  42180144 atatttaatattaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaat 42180211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 38389444 - 38389606
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | |||    
T  38389444 tgggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatt 38389543  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  ||||   ||||||||||  |||| |||| | |||||| ||||||||||||||||||    
T  38389544 taatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaat 38389606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 50204401 - 50204562
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || ||||  ||||||||| ||    |||||| || ||||    
T  50204401 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagttttatattt 50204500  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | || |||||||| |||| || |||||||||| ||||||||||||||||||    
T  50204501 aatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 50204562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 47386920 - 47387019
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg--aaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||||||||||| ||||||||||||| ||| |||| | |||||||||||||||||||||||||  |||  ||||||||||||  | |||||||||||||    
T  47386920 gggtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagttatacatt 47387019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 51339360 - 51339284
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 232  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| |||| ||| |||||||||||    
T  51339360 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattatt 51339284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 314
Target Start/End: Complemental strand, 23803180 - 23803065
Alignment:
Q  200 agtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaattt 298  Q
    |||||||| ||||| ||||||  |||||||||||||    |||||| || ||||||||  |||||| |||||||||||||||| || |||||||||| ||    
T  23803180 agtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaactt 23803081  T
Q  299 cttaacatgtgcaaat 314  Q
    ||||||||||||||||    
T  23803080 cttaacatgtgcaaat 23803065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 46845621 - 46845539
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 234  Q
    |||||||||||||  ||||||||||||||||| |||| | |||||||||||| || ||||||||| |||||||||||||||||    
T  46845621 tgggtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattattta 46845539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 148 - 313
Target Start/End: Complemental strand, 54621403 - 54621239
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttat 246  Q
    ||||| || |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||| |||  ||| ||||||||||| |  | || ||||     
T  54621403 ttttaaggatttgtctaacatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgatta-aatgttac 54621305  T
Q  247 acatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 313  Q
    | |||||||| |||| |  ||| ||||||  ||||||||||| ||||||||| |||| |||||||||    
T  54621304 atatttaatataaaaaacacaacttccaagtcaaagttactaatttaaattt-ttaaaatgtgcaaa 54621239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 308
Target Start/End: Complemental strand, 1569368 - 1569215
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaa 254  Q
    ||||||||||| | ||||||||||||||| |||| | |||   || |||||| |||||||| |||  ||||||| |||||  ||||||||| | || |||    
T  1569368 gtttgtctaacatatgcaatattgcacattttaaagcaacccgaactagtaattttttattaaaaaacaacaataatttattagaaagttacatatctaa 1569269  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgt 308  Q
    || |||||   ||||||||||| |||||||| ||||||||| ||||||||||||    
T  1569268 tataaaatgaacaagttccaatacaaagttattattttaaacttcttaacatgt 1569215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 37055546 - 37055385
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||| |||||||||| ||||||| | |||||||| |||||| |||  |||| |||  ||||||||||||  | |||||| || | ||    
T  37055546 gggtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagtt 37055447  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  |||||||| || |||  ||||||||||||| ||||||| ||||||||||    
T  37055446 aatataaaaaacacaagttccgatacaactttactattttaaacttcttaatatgtgcaaat 37055385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 314
Target Start/End: Original strand, 40497073 - 40497206
Alignment:
Q  181 acatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaa 280  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||| |||  | |||  || | | |||||| |||||   ||||||| ||   ||    
T  40497073 acatgttaaggcaactaaaagtagtaactttttattgaaatcaacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagttaa 40497172  T
Q  281 agttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| |||||| |||||| |||||||||||    
T  40497173 agttactactttaaacttcttatcatgtgcaaat 40497206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 314
Target Start/End: Original strand, 9710964 - 9711103
Alignment:
Q  176 attgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 274  Q
    ||||||||||||||   |||||||| |||||||||||||||| ||| ||||||||||| |  | ||| ||||  ||| | |||||||||| |||||||||    
T  9710964 attgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattattaattaaaaatttatgtattaattacaaaatatacaagttcca 9711063  T
Q  275 atgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||  || |||||| || |||||||||| |||||||    
T  9711064 atgcgaatgtattattttgaacttcttaacatatgcaaat 9711103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 32553361 - 32553444
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 232  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||| |||||||||||| |||| |||| ||||||| |||||||    
T  32553361 ttataggtttatctaacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattatt 32553444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 314
Target Start/End: Original strand, 8165638 - 8165805
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta-acagaaagtta 245  Q
    ||||| ||||||||||||| ||||||| ||||||||| ||||   |||||| | |||||| ||||| ||| ||| |||| |||||||| ||| ||||||     
T  8165638 ttttaagggtttgtctaacatgtgcaacattgcacattttaaaacaactaataatagtaacttttttttggaaaacaacgattatttataca-aaagttt 8165736  T
Q  246 tacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     | | ||||||  |||| | ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  8165737 aagagttaatattaaatgtacaagttccaatacaaaatttatattttaaacttcttaacatgtgcaaat 8165805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 314
Target Start/End: Complemental strand, 16875175 - 16875044
Alignment:
Q  183 atgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaa 281  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| || |  | |||| || | |||||||| |||| |  |||||| |||   |||    
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgatta-aaagctacatatttaatataaaaaacacaagtttcaagttaaa 16875077  T
Q  282 gttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||| |||||| ||||||||||||||||||    
T  16875076 gttactactttaaacttcttaacatgtgcaaat 16875044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 35414903 - 35414828
Alignment:
Q  239 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| ||| |||||||||||| ||| |||||||  |||||||||||||| || ||||||||||||| ||||    
T  35414903 aaagttatatattaaatacaaaatatacaacttccaatataaagttactattttgaacttcttaacatgtgtaaat 35414828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 30214189 - 30214109
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 234  Q
    ||||||||||||| ||||||||||| |||||  ||||| |||||||| |||||| |||| |||| |||||||||||||||||    
T  30214189 gggtttgtctaacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattattta 30214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 51567998 - 51567839
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt--attgaaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||||||||||| || |||| ||||||||||||||   |||||| |||||||| |||||   | |||| |||||||||||||    |||||| || |||    
T  51567998 gggtttgtctaacatgcgcaacattgcacatgttaaaacaactaatagtagtaacttttttcttggaaaacaacaattatttattcaaaagttttatatt 51567899  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  |||| | |||||| |||| |||| || ||||||||||   ||||||||||||||||    
T  51567898 taatagtaaatgtacaagtttcaatacaaaatttctattttaaa---cttaacatgtgcaaat 51567839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 35094972 - 35095020
Alignment:
Q  172 caatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaa 35095020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 39365310 - 39365258
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    |||||||||||| |||||||||||||||||||||| |  ||||||||||||||    
T  39365310 ggtttgtctaacatgtgcaatattgcacatgttaaagctactaaaagtagtaa 39365258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 51401479 - 51401599
Alignment:
Q  195 ctaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttta 293  Q
    |||| |||||||| ||||| ||| ||| |||||||||||||   |||  || || ||||||||  |||| | ||||||||||| |||| || ||||||||    
T  51401479 ctaatagtagtaacttttttttggaaaacaacaattatttatttgaattttttatatttaatattaaatgtacaagttccaatacaaaatttctatttta 51401578  T
Q  294 aatttcttaacatgtgcaaat 314  Q
    || ||||||||||||||||||    
T  51401579 aacttcttaacatgtgcaaat 51401599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 313
Target Start/End: Complemental strand, 54027096 - 54026952
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaatt---atttaacagaaagttatacatttaatacaaaatat 264  Q
    ||||||||||||||||||||||| || ||||||| || || |||||||||||| | ||| ||   ||| || ||||   |||| |||||||  ||||||     
T  54027096 tgtgcaatattgcacatgttaagata-ctaaaagaagcaactttttattgaaaactacagttgttattaaaaagaa---tatatatttaatgtaaaatac 54027001  T
Q  265 tcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 313  Q
     |||||| ||||  ||| |||||||||||||||||||||||| ||||||    
T  54027000 acaagtttcaatataaatttactattttaaatttcttaacatttgcaaa 54026952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 38786463 - 38786342
Alignment:
Q  193 aactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt 292  Q
    |||||||| |||||| ||||||||||||  ||||||||||||  | ||| | | ||||||| || |||||   ||| || |||  |||| ||||||||||    
T  38786463 aactaaaaatagtaattttttattgaaaataacaattatttattaaaaaat-acacatttagtataaaatccacaaatttcaaatcaaaattactatttt 38786365  T
Q  293 aaatttcttaacatgtgcaaatg 315  Q
    ||| |||||||||||||||||||    
T  38786364 aaacttcttaacatgtgcaaatg 38786342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 29685884 - 29685937
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    ||||| |||||| |||||||||||||||||||||| || |||||||| ||||||    
T  29685884 gggttcgtctaatctgtgcaatattgcacatgttatggcaactaaaattagtaa 29685937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 31318735 - 31318800
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||  |||| | |||||||||||||||| || |||| ||||| ||||||||||||||||||    
T  31318735 atttaatattaaatgtacaagttccaatgcaaaatttctatcttaaacttcttaacatgtgcaaat 31318800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 304
Target Start/End: Original strand, 38785924 - 38786029
Alignment:
Q  200 agtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaattt 298  Q
    |||||||| ||||| ||||||  |||||||||||||   ||||||| || |||||||| ||||  | ||||||||||| |||| || |||||||||| ||    
T  38785924 agtagtaatttttttttgaaaaacaacaattatttatttgaaagttttatatttaatataaaacgtacaagttccaatacaaaatttctattttaaactt 38786023  T
Q  299 cttaac 304  Q
    ||||||    
T  38786024 cttaac 38786029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 43750052 - 43750103
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    ||||||||||| || ||||||||||||||||||||  | |||||||||||||    
T  43750052 gtttgtctaacatgggcaatattgcacatgttaagacatctaaaagtagtaa 43750103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 26291197 - 26291251
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgtt-aaggtaactaaaagtagtaagtt 210  Q
    |||||| ||| ||||||||||| |||||||| |||||||| ||||||||||||||    
T  26291197 tttgtcaaacatgtgcaatattacacatgttaaaggtaaccaaaagtagtaagtt 26291251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 27300507 - 27300561
Alignment:
Q  258 aaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 312  Q
    |||||||||||||| |||| |||| | ||||||||||| |||||||||| |||||    
T  27300507 aaaatattcaagtttcaatacaaattaactattttaaacttcttaacatctgcaa 27300561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 48776887 - 48776933
Alignment:
Q  268 agttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||| ||| ||||| |||||||||||||||| |||||||||    
T  48776887 agttccaatgtaaatttacttttttaaatttcttaacttgtgcaaat 48776933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 2566580 - 2566641
Alignment:
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||| | |||||| |||| |||| ||||||||||||||||  ||||||||| ||||    
T  2566580 aatacaaaatgtacaagtttcaatacaaaattactattttaaattttctaacatgtgtaaat 2566641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 26499637 - 26499725
Alignment:
Q  222 caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 311  Q
    |||||||||||||    |||||| || | ||||||  |||||| ||| ||||||| |||| || ||||||||||||||||||||||||||    
T  26499637 caacaattatttattcaaaagttttatacttaatattaaatatacaaattccaatacaaaatt-ctattttaaatttcttaacatgtgca 26499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 48240266 - 48240163
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaat 255  Q
    ||||||||||| |||| |||||| |||||||||| | |||||||||||| ||  ||||||| |||  |||| |||||||  ||||||  ||| |||||||    
T  48240266 gtttgtctaacatgtgtaatattacacatgttaaagaaactaaaagtagcaaagttttattaaaa--aacatttatttattagaaag--atatatttaat 48240171  T
Q  256 acaaaata 263  Q
    | ||||||    
T  48240170 ataaaata 48240163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 24086983 - 24087063
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattattta 234  Q
    |||||||||||| ||||||| ||||||||| ||||   |||||| |||||||| ||||| ||  ||| |||||||||||||    
T  24086983 ggtttgtctaacatgtgcaacattgcacatcttaaaacaactaacagtagtaaatttttcttaaaaaacaacaattattta 24087063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 27549537 - 27549589
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    |||||||||||  ||||||| ||||||||||||||   |||||||||||||||    
T  27549537 ggtttgtctaatatgtgcaacattgcacatgttaaaacaactaaaagtagtaa 27549589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 35415199 - 35415139
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt 216  Q
    |||| |||||| |||||| |||||||||||||||   |||||||| |||||||||| ||||    
T  35415199 gtttatctaacatgtgcattattgcacatgttaaaacaactaaaaatagtaagtttgtatt 35415139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 36812381 - 36812417
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  36812381 caaagttactactttaaacttcttaacatgtgcaaat 36812417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 38277448 - 38277492
Alignment:
Q  270 ttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||| |||| || |||||||||| ||||||||||||||||||    
T  38277448 ttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 38277492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 1e-72; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 5583739 - 5583577
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||    
T  5583739 atgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatt 5583640  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5583639 taatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 5583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 147 - 314
Target Start/End: Complemental strand, 7757972 - 7757805
Alignment:
Q  147 attttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttat 246  Q
    |||| ||| ||||||||||| ||||||| |||| |||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||| ||||||||    
T  7757972 atttcatgagtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttattaaaaccaacaattatttaacaaaaagttat 7757873  T
Q  247 acatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7757872 atatttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaat 7757805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 38248579 - 38248439
Alignment:
Q  173 aatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttc 272  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||| ||| ||||| |||||||||||||| |||||||||    
T  38248579 aatattgcacatgttaaggtaactaaaa-tagcaagtttttattaaaaccaacaattatttaacaaaaaattatatatttaatacaaaatgttcaagttc 38248481  T
Q  273 caatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  38248480 caatgtaaaattactattttaaatttcttaacatgtgcaaat 38248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 19228424 - 19228584
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | ||||    
T  19228424 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatattt 19228522  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  19228523 aatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 19228584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 34214131 - 34213968
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||  |||| |||||||||||| | |||||||| ||||||||||||||||||| | ||||||||||| | | ||||||||| ||||    
T  34214131 gggtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttatatattt 34214032  T
Q  253 --aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
      |||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  34214031 ttaataaaaaatgttcaagttccaatgaaaaattactattttaaatttcttaacatgtgcaaat 34213968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 15411802 - 15411641
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||| |||||  | |||| || | ||||    
T  15411802 gggtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatattt 15411703  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||||   |||||| |||  |||||||||||||||||| ||||||||||||||||||    
T  15411702 aatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaat 15411641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 150 - 314
Target Start/End: Complemental strand, 27665227 - 27665063
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatac 248  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| |     
T  27665227 ttatgggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacat 27665129  T
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| |||| |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  27665128 atttaatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 27665063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 39904238 - 39904148
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 232  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  39904238 tattattttatgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 39904148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 11661059 - 11660946
Alignment:
Q  193 aactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt 292  Q
    |||||||||||| || |||||||||||   ||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  11661059 aactaaaagtagcaaatttttattgaataaaacaattatttattaaaaagttatacatttaatacaaaatatacaagttccaatgcaaagttactattta 11660960  T
Q  293 aaatttcttaacat 306  Q
    ||| ||||||||||    
T  11660959 aaacttcttaacat 11660946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 24729725 - 24729596
Alignment:
Q  186 ttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagtt 284  Q
    |||| |||||||||| |||||| |||||||||||| | || |||||||||  | ||||||||  | |||||||||||||| ||| |||||||||||||||    
T  24729725 ttaaagtaactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagtt 24729626  T
Q  285 actattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||||||||||||||||||    
T  24729625 actattttaaatttcttaacatgtgcaaat 24729596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 304
Target Start/End: Complemental strand, 26230043 - 26229883
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaag 242  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |  | ||||    
T  26230043 tattcttttaagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttattaaaaccaacaattattgatta-aaag 26229945  T
Q  243 ttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaac 304  Q
    ||| | |||||||| |||| ||  || ||  ||  |||||||||||||||||| ||||||||    
T  26229944 ttacatatttaatataaaaaatataaattttaagtcaaagttactattttaaacttcttaac 26229883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 170 - 314
Target Start/End: Complemental strand, 40562241 - 40562096
Alignment:
Q  170 tgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaa 268  Q
    |||||||||| ||||||||| |||  |||||| |||||||||||||||||| ||||||||||||||  | | ||||||| ||| ||||||||||||  ||    
T  40562241 tgcaatattgtacatgttaaagtagttaaaagcagtaagtttttattgaaaatcaacaattatttattaaagagttatatattaaatacaaaatataaaa 40562142  T
Q  269 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||| ||||||||||||| ||||||||| || |||||||||||||||    
T  40562141 gtttcaatgcaaagttaatattttaaactttttaacatgtgcaaat 40562096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 16919334 - 16919173
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| |  | ||||||| | |||    
T  16919334 tgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgatta-aaagttacatatt 16919236  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| |||| |  |||||| |||  ||||||||||| |||||| || |||| ||||||||||    
T  16919235 taatataaaaaacacaagtttcaagtcaaagttactactttaaacttgttaatatgtgcaaat 16919173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 12016665 - 12016825
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |  | |||| || | ||||    
T  12016665 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgatta-aaagctacatattt 12016763  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||||||   ||| |||||| |||||| ||||||| ||||||||||    
T  12016764 aatataaaaaacacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaat 12016825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 16126738 - 16126578
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | |||| || | ||||    
T  16126738 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aaagctacatattt 16126640  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  |||||| |||   |||||||||| |||||| ||||||||||||||||||    
T  16126639 aatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaat 16126578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 22705450 - 22705613
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||| ||||   ||||||| | |    
T  22705450 tatgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttaatttaaagttacata 22705548  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||| |||| |  |||||| |||   ||| |||||| |||||| ||||||| ||||||||||    
T  22705549 tttaatataaaaaacacaagtttcaagttaaaattactactttaaacttcttaaaatgtgcaaat 22705613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 14377421 - 14377583
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacat 250  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||   | ||||||| | ||    
T  14377421 atgggtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgtta-aaagttacatat 14377519  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||| |  |||||| |||  ||||||||||| |||||| |||||| ||||| |||||    
T  14377520 ttaatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaat 14377583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 314
Target Start/End: Complemental strand, 13351396 - 13351230
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtag-taagtttttattg-aaatcaacaattatttaacagaaagttat 246  Q
    ||||||||| || ||||  ||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||| ||||   |||||||     
T  13351396 tttatgggtctgactaatatgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaatta-ttaattaaaagttac 13351298  T
Q  247 acatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | ||| |||| |||| |  ||||||| ||  ||||||||||| |||||| ||||||||||||||||||    
T  13351297 atattaaatataaaaaacacaagttctaagtcaaagttactactttaaacttcttaacatgtgcaaat 13351230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 29157918 - 29157848
Alignment:
Q  244 tatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29157918 tatatatttaatacaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaat 29157848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 9747313 - 9747476
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| ||||||||| | ||||||||||  |||||||||||||||| | ||||||| ||| |||||| |||||   | |||| || | ||    
T  9747313 atgggtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatat 9747412  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||||   ||||||||||  |||| ||||||||||||| ||||||||||||| ||||    
T  9747413 ttaatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaat 9747476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 20566198 - 20566036
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||| ||| || | ||||||| ||| |||||||||||||  | ||  ||||  |||    
T  20566198 tgggtctgtctaacatgtgcaatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctatt 20566099  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| ||||||  ||||||||||| ||||  || || |||||| ||||||||||||| ||||    
T  20566098 taataaaaaatacacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaat 20566036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 23932560 - 23932724
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||| |||||| |||  |||| |||  ||||||||||||  | |||||| || |    
T  23932560 tatgggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttata 23932659  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||||| |||||   |||||||| || |||  ||||||||||||| ||||||| || |||||||    
T  23932660 gttaatataaaatgcacaagttccgatacaattttactattttaaacttcttaatatatgcaaat 23932724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 43806358 - 43806519
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||||||||||||   || ||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||    
T  43806358 gggtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatattt 43806457  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | |||||| |||| |||| || |||||||||| || |||||||||||||||    
T  43806458 aatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaat 43806519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 17235029 - 17234957
Alignment:
Q  242 gttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| ||| |||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  17235029 gttatatattaaatacaaaatatacaaattccaatacaaaattactattttaaatttcttaacatgtgcaaat 17234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 314
Target Start/End: Original strand, 16123288 - 16123437
Alignment:
Q  165 acctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaata 263  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||| | ||||||| || |  | || |||| | |||||||| |||| |    
T  16123288 acctgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgatta-aatgttacatatttaatataaaaaa 16123386  T
Q  264 ttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
      |||||||| |  |||| |||||| |||||| |||||| |||||||||||    
T  16123387 cacaagttcctaatcaaaattactaatttaaacttcttatcatgtgcaaat 16123437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 34817535 - 34817649
Alignment:
Q  147 attttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttat 246  Q
    |||||||||||||||||||| | ||||||||||||| | ||||  ||||||||| ||  || | |||||||||| |||||||||||||  | ||||||||    
T  34817535 attttatgggtttgtctaacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaacaacaattatttattaaaaagttat 34817634  T
Q  247 acatttaatacaaaa 261  Q
    | |||||||| ||||    
T  34817635 atatttaataaaaaa 34817649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 311
Target Start/End: Original strand, 9450264 - 9450413
Alignment:
Q  163 taacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaa 261  Q
    |||| ||||||||||||||||| |||| |||  ||||| ||  || | ||||||||||  |||||||||||||  | ||| ||||| |||||||| ||||    
T  9450264 taacatgtgcaatattgcacatcttaaagtagttaaaaataaaaactatttattgaaaaacaacaattatttattaaaaaattatatatttaatagaaaa 9450363  T
Q  262 tattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 311  Q
    ||  ||| ||||||| ||||  ||||| ||||||||||||||||||||||    
T  9450364 tacacaaattccaatacaaacatactactttaaatttcttaacatgtgca 9450413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 22162237 - 22162180
Alignment:
Q  173 aatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaatta 230  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  22162237 aatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaccaacaatta 22162180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 43388946 - 43388865
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 234  Q
    ||||||||||||  ||||||||||||||||| |||| | |||||||||||| || ||||||||| |||||||||||||||||    
T  43388946 gggtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattattta 43388865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 10690780 - 10690860
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatt 232  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |||| |||  ||| |||||||||||    
T  10690780 tgggtttgtctaacatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattatt 10690860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 17265508 - 17265563
Alignment:
Q  259 aaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  17265508 aaatattcaagttcgaacgcaaagttactattttaaatttcttaacaagtgcaaat 17265563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 314
Target Start/End: Original strand, 7720116 - 7720274
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    ||||||  | |||||||    
T  7720116 tttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtttaatatttaat 7720215  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || || | | || |||||||| |||| || |||| ||||| || |||||| ||||||||    
T  7720216 actaagtgtacacgttccaatacaaaatttctatcttaaactttttaacacgtgcaaat 7720274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 25998179 - 25998021
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||| ||| |||||| ||||||||||||||| ||||||||||||   || ||||||||| ||| |||||||||||||  | |||| || | ||||| |    
T  25998179 tttgtcgaacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagatacatatttatt 25998080  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |  ||||   |||||||||||||||| ||| | |||||| ||| ||||||  |||||||    
T  25998079 attaaatgaacaagttccaatgcaaaattaattttttaatttttttaacacatgcaaat 25998021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 307
Target Start/End: Complemental strand, 36612911 - 36612757
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||| ||||||||  ||||||| |||||||| ||||| || |||| ||||| |||||||    |||||| || ||||    
T  36612911 gggtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatattt 36612812  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatg 307  Q
    ||||  |||| | ||||||  ||| |||| ||  ||||||||| |||||||||||    
T  36612811 aatattaaatgtacaagttttaatacaaaatttttattttaaacttcttaacatg 36612757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 307
Target Start/End: Complemental strand, 36620762 - 36620608
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||| ||||||||  ||||||| |||||||| ||||| || |||| ||||| |||||||    |||||| || ||||    
T  36620762 gggtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagttttatattt 36620663  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatg 307  Q
    ||||  |||| | ||||||  ||| |||| ||  ||||||||| |||||||||||    
T  36620662 aatattaaatgtacaagttttaatacaaaatttttattttaaacttcttaacatg 36620608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 314
Target Start/End: Original strand, 25948058 - 25948198
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaag--tttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 273  Q
    ||||||||||||| | || |||||||||| ||  ||||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  25948058 ttgcacatgttaaagcaattaaaagtagttagcgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 25948157  T
Q  274 aatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| || | ||| |||||||||||||||||||||||    
T  25948158 aatgcaaaatttcaattataaatttcttaacatgtgcaaat 25948198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 35729108 - 35729149
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  35729108 ttttatgggtttgtctaacatgtgcaatattgcacatgttaa 35729149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 37471920 - 37471759
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgtt-aaggtaactaaaagtagtaagttttt-attgaaat-caacaattatttaacagaaagttatacattt 252  Q
    ||||||||||| | || ||||||||||||||| || | |||||||| |||||  ||||| |||||||  ||||||| |||||  | |||  || | ||||    
T  37471920 gtttgtctaacatttgtaatattgcacatgtttaaagcaactaaaaatagtattttttttattgaaagacaacaataatttattaaaaaactacatattt 37471821  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||||   |||||| |||  |||||||||||||||||| ||||||||||||||||||    
T  37471820 aatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaat 37471759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 40503119 - 40503054
Alignment:
Q  196 taaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaa 260  Q
    ||||||||  ||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||    
T  40503119 taaaagtaacaagtttttattgaaaaccaacaattatttaacaaaaagttatatatttaatacaaa 40503054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 4579966 - 4579902
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||  |||||| |||| |||||||    
T  4579966 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaa 4579902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 2051651 - 2051754
Alignment:
Q  193 aactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattt 291  Q
    |||||||| ||| |||||||||||||||  |||||||||||||  | ||| ||| | |||||||| |||||||  ||||  ||||||| |||||||||||    
T  2051651 aactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaatttaaatatttaatataaaatatataagtatcaatgcatagttactattt 2051750  T
Q  292 taaa 295  Q
    ||||    
T  2051751 taaa 2051754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 4821280 - 4821435
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||||||||||||| |||||| || |||      |||||| |||| |||| ||| |||||||||||||  | |||| || | |||    
T  4821280 tgggtttgtctaacatgtgcaatattgcatatgttatggcaac------tagtaacttttcattgaaaaccaacaattatttatta-aaagctacatatt 4821372  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| |||| |  |||||| |||  ||||||||||| |||||| |||||| |||||||||||    
T  4821373 taatataaaaaacacaagtttcaaatcaaagttactactttaaacttcttatcatgtgcaaat 4821435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 12919528 - 12919369
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattg-aaatcaacaattatttaacagaaagttatacatttaa 254  Q
    |||||||||| |||||||||||||||||||||| | || |||||||| |||  ||||||||| |||  | |||| |||||  | |||  || | ||||||    
T  12919528 tttgtctaacatgtgcaatattgcacatgttaaagcaattaaaagtattaatttttttattgaaaagtagcaataatttattaaaaaactacatatttaa 12919429  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || |||||   |||||| |||   |||||||||||||||||||| |||||||||| ||||    
T  12919428 tataaaatgaacaagtttcaagataaagttactattttaaattttttaacatgtgtaaat 12919369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 26003675 - 26003612
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 213  Q
    ||||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| |||||    
T  26003675 ttatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt 26003612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 29795056 - 29795102
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaa 200  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  29795056 gggtttgtctaacatgtgcaatattgcacatattaaagtaactaaaa 29795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 5853622 - 5853482
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaagt--ttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 273  Q
    ||||||||||||| | || |||||||||| |||  |||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  5853622 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 5853523  T
Q  274 aatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| || | ||| |||| ||||||||||||||||||    
T  5853522 aatgcaaaatttcaattataaacttcttaacatgtgcaaat 5853482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 12438828 - 12438747
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    ||||||||| |||| |||||||||||||| ||||| ||  |||||||| || ||| |||| ||| ||| |||||||||||||    
T  12438828 tgggtttgtataacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcattaaaaccaacaattattta 12438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 16493691 - 16493551
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaa--gtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 273  Q
    ||||||||||||| | || |||||||||| |  |||||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  16493691 ttgcacatgttaaagcaattaaaagtagttaatgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 16493592  T
Q  274 aatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| || | ||| |||| ||||||||||||||||||    
T  16493591 aatgcaaaatttcaattataaacttcttaacatgtgcaaat 16493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 2544333 - 2544228
Alignment:
Q  209 tttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt-aaatttcttaacatg 307  Q
    ||||||||||||| ||||||||||||  | ||| ||||||||| |||| ||||||  ||||||  ||| |||| |||||||||| || ||| ||||||||    
T  2544333 tttttattgaaat-aacaattatttattaaaaaattatacattaaatataaaatacacaagttttaatacaaacttactattttgaacttttttaacatg 2544235  T
Q  308 tgcaaat 314  Q
    | |||||    
T  2544234 ttcaaat 2544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 314
Target Start/End: Original strand, 22704556 - 22704696
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaa--gtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 273  Q
    ||||||||||||| | || |||||||||| |  |||||||||| ||| |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  22704556 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 22704655  T
Q  274 aatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| || | ||| |||| ||||||| ||||||||||    
T  22704656 aatgcaaaatttcaattataaacttcttaagatgtgcaaat 22704696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 43942036 - 43941967
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  43942036 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 43941967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 44023257 - 44023220
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  44023257 atgggtttttctaacctatgcaatattgcacatgttaa 44023220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 39607471 - 39607431
Alignment:
Q  270 ttccaatgcaaagttactattttaaatttcttaacatgtgc 310  Q
    ||||||| |||| ||| ||||||||||||||||||||||||    
T  39607471 ttccaatacaaacttattattttaaatttcttaacatgtgc 39607431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 262
Target Start/End: Original strand, 45302340 - 45302447
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt--gaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    |||||||||| ||| ||||| | |||||||||| | ||| ||||||| ||||||||||||   ||| ||| |||||||||  | ||| ||||| ||||||    
T  45302340 tttgtctaacatgtacaataatacacatgttaaagaaacaaaaagtaataagtttttattaaaaaaacaataattatttattaaaaaattatatatttaa 45302439  T
Q  255 tacaaaat 262  Q
    || |||||    
T  45302440 tataaaat 45302447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 30839780 - 30839940
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  30839780 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatattta 30839879  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30839880 atacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 30839940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 36597578 - 36597738
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||| |||||    
T  36597578 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagttatatattta 36597677  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36597678 atacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 36597738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 155 - 314
Target Start/End: Original strand, 40512951 - 40513110
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |    
T  40512951 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaatcaacaattatttaacaaaaagttatatatttga 40513050  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  40513051 tacaaaatattcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaat 40513110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 314
Target Start/End: Original strand, 6863584 - 6863715
Alignment:
Q  183 atgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaag 282  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||| |||||||||||||  ||||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaag 6863683  T
Q  283 ttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||||| |||||||||||||||    
T  6863684 ttactattttaaattttttaacatgtgcaaat 6863715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 2795522 - 2795682
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | ||||    
T  2795522 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatattt 2795620  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  2795621 aatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 2795682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 8103761 - 8103599
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | | |    
T  8103761 atgggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataat 8103662  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| |||||   ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  8103661 taatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 8103599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 314
Target Start/End: Complemental strand, 24014871 - 24014707
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttataca 249  Q
    |||| |||||||||||| ||||||| ||||||||||||||   |||||||||||  ||||||||||| ||| | |  | |||||| || |||| |||| |    
T  24014871 ttataggtttgtctaacatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaactaataatatttaccaaaaagatatata 24014772  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||| |||||| |||||  |||||||||||| ||| || |||||||||||||||    
T  24014771 tttaatacaaaatatacaagtttcaatgtgaagttactatttaaaactttttaacatgtgcaaat 24014707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 312
Target Start/End: Complemental strand, 10665144 - 10664986
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||| |||| |||||||  |  |||||||||  | ||||||||| |||||    
T  10665144 gggtttgtccaacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaatattaattatttattaaaaagttataaattta 10665045  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 312  Q
    |||   ||||  ||||||||||  |||| |||| |||||||||||||||| ||||||||    
T  10665044 atatgcaatacacaagttccaagacaaacttaccattttaaatttcttaagatgtgcaa 10664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 34578007 - 34578170
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||| |||| |||||||||||| || |  | |||| || | |    
T  34578007 tatgggtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgatta-aaagctacata 34578105  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||| |||| || ||||||  ||   ||||||||||||||||| || |||||||||||||||    
T  34578106 tttaatataaaaaatacaagttttaagttaaagttactattttaaactttttaacatgtgcaaat 34578170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 35469551 - 35469713
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt-attgaaat-caacaattatttaacagaaagttatacatt 251  Q
    ||||||||||||| |||| | || |||||||||||| |||||||||||||| || ||||| |||||||  ||||||| | |||| | ||||||||| |||    
T  35469551 gggtttgtctaacatgtgaattagtgcacatgttaaagtaactaaaagtagcaatttttttattgaaaaacaacaatcaattaagaaaaagttatatatt 35469650  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| ||||||  | |||||||||  ||  |||||||||||||||| |||||||||||||||    
T  35469651 taatataaaataaactagttccaataaaagcttactattttaaattttttaacatgtgcaaat 35469713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 30328506 - 30328346
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||| |||  ||| ||||||||||| |  | |||| || | ||||    
T  30328506 gggtttgtctaacatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgatta-aaagctacatattt 30328408  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  30328407 aatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaat 30328346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 11250136 - 11249996
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||| |||| |||||||||||||||||||||| | |||||||||||| ||||||| ||   || |||||||||||||  |  || |||||  ||||    
T  11250136 gggtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaagtagcaagttttaatgataaacaacaattatttagtaataaattatatgttta 11250037  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaa 294  Q
    ||||||||| | || ||| ||||||||||||||||||||||    
T  11250036 atacaaaatgtacatgtttcaatgcaaagttactattttaa 11249996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 31366131 - 31365969
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa--gtttttattg-aaatcaacaattatttaacagaaagttatacat 250  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||   ||||||||| ||| ||||||||||| |  | || |||| | ||    
T  31366131 gggtttgtctaacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattattgatta-aatgttacatat 31366033  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||| |  ||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  31366032 ttaatataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaat 31365969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 15190870 - 15191032
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||| ||||||| | |||||||||| |  | ||||||| | |||    
T  15190870 tgggtttgtctaacatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgatta-aaagttacatatt 15190968  T
Q  252 taata-caaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  |||| |  |||||| |||  |||| |||||| |||||| ||||||||||||||||||    
T  15190969 taatataaaaaaacacaagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaat 15191032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 3398217 - 3398379
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| | | |||||||||    |||||| || |||    
T  3398217 tgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatatt 3398316  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  3398317 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 3398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 11636730 - 11636890
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||||| |||| |||| ||| ||||||||| |||  | ||| ||| | ||||    
T  11636730 gggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatattt 11636829  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  ||||   |||||| |||  ||||||||||| |||||| |||||| |||||||||||    
T  11636830 aata-taaatgcacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaat 11636890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 12642170 - 12642012
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattat--ttaacagaaagttatacattt 252  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||||| |||| |||| ||| ||||||||||  || |   || |||| | ||||    
T  12642170 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgttta---aatgttacatattt 12642074  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||||||  |||||||| || |||||| ||||||||||||||||||    
T  12642073 aatataaaaaacacaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaat 12642012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 311
Target Start/End: Original strand, 9184209 - 9184363
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||||| |  | |||  || | |||||||    
T  9184209 tttgtctaacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgatta-aaaactacatatttaat 9184307  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 311  Q
    | |||| |  ||||||||||   |||||||||| |||||| |||||||||||||||    
T  9184308 ataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgca 9184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 314
Target Start/End: Original strand, 4047412 - 4047571
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||| |||||| | | |||||||||| ||||||||||||||||||||||||| |||| |||| ||| |||||||| || |  | |||| || | |||||    
T  4047412 ggtttatctaacatatacaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgatta-aaagctacatattta 4047510  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||| |||| |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  4047511 atataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaat 4047571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 18150454 - 18150566
Alignment:
Q  197 aaaagtagtaa-gtttttattgaa-atcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaa 294  Q
    ||||||||||| |||||||||||| | || ||||||||||  | || |||||| |||||||||||||||| ||||||| || ||||| ||||||||||||    
T  18150454 aaaagtagtaaagtttttattgaataacaccaattatttattaaaatgttatatatttaatacaaaatatacaagttctaacgcaaaattactattttaa 18150553  T
Q  295 atttcttaacatg 307  Q
    | |||||||||||    
T  18150554 acttcttaacatg 18150566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 18841887 - 18841724
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||    
T  18841887 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatat 18841788  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||  |||| | ||| || |||| |||| || |||||||||| || ||||||| |||||||    
T  18841787 ttaatattaaatgtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaat 18841724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 41791765 - 41791714
Alignment:
Q  323 atataaataatacactttgttgtctttatcatcactttaaagtacataatca 374  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41791765 atataaataatacactttgttgtctttatcatcactttaaattacataatca 41791714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 32020161 - 32020003
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| ||||||||||||||| |||||||| |||||||  |||||| ||||  ||||||  || | ||||||    | ||||||||  |||||||    
T  32020161 tttgtctaacatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattattattaaaaaagttatctatttaat 32020062  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | | ||||  ||||||||||  |||| |||| |||||||||||||||||||||||||||    
T  32020061 atagaatacacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaat 32020003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 5958303 - 5958226
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaatta 230  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||||||||||||| |||| |||| |||||||||||||    
T  5958303 gggtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaatta 5958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 40166332 - 40166433
Alignment:
Q  206 aagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaac 304  Q
    |||||||||||||||  ||||||||||||| || ||||||||| |||||||||||||| | |||||| |||| || |||| ||| |||| |||| |||||    
T  40166332 aagtttttattgaaaaacaacaattatttatcaaaaagttatatatttaatacaaaatgtacaagtttcaatacatagttgctaatttagatttattaac 40166431  T
Q  305 at 306  Q
    ||    
T  40166432 at 40166433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 11375972 - 11376039
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 234  Q
    |||||||||||||||||||||| | ||||||||||||||| |||| |||| ||||||| |||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattattta 11376039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 314
Target Start/End: Complemental strand, 23995604 - 23995435
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacag----aaagttat 246  Q
    |||| ||||||||||| | ||||||||||||||||||||   || ||||||||   ||||||| ||  || |||||||||||||  |     ||||||||    
T  23995604 tatgagtttgtctaacatatgcaatattgcacatgttaaataaattaaaagtatacagtttttgttagaaacaacaattatttattaattaaaaagttat 23995505  T
Q  247 acat--ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | ||  |||||||||||| | |||||| ||||  ||| ||||||||||||| |||||||||||| |||||    
T  23995504 atatatttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaat 23995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 311
Target Start/End: Complemental strand, 24329813 - 24329657
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||||||| ||||||| ||||  ||||||||| || ||||||||||||| |||| |||| ||| ||||| |||||||    |||| ||   |||||    
T  24329813 ggtttgtctaacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctattta 24329715  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 311  Q
    ||| ||||| | ||||||||||  ||||||||| | |||||| || ||||||||||||    
T  24329714 atataaaatgtacaagttccaagtcaaagttaccactttaaactttttaacatgtgca 24329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 30893469 - 30893513
Alignment:
Q  270 ttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||    
T  30893469 ttccaatgcaaagttactattttaaacttcttaacatgtgaaaat 30893513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 288
Target Start/End: Original strand, 315338 - 315476
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaag-gtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttataca 249  Q
    ||||||||||| ||| ||| ||||||| || || ||||  | |||||||| |||||| |||| ||||||| || | || ||||||  | ||||||||  |    
T  315338 atgggtttgtcaaacatgtacaatattacatatattaaaagcaactaaaaatagtaatttttgattgaaaatccataaatatttattaaaaagttatgta 315437  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttacta 288  Q
    |||||| |||||| | |||||||||||||||||||||||    
T  315438 tttaatgcaaaatgtacaagttccaatgcaaagttacta 315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 11692808 - 11692758
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa 207  Q
    |||||||||| ||| ||||||||||||||||||  ||||||||||||||||    
T  11692808 tttgtctaacatgtacaatattgcacatgttaaaataactaaaagtagtaa 11692758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 3936191 - 3936235
Alignment:
Q  244 tatacatttaatacaaaatattcaagttccaatgcaaagttacta 288  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||    
T  3936191 tatacatttaatacaaaatatgcaagttccaacgcaaaattacta 3936235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 30893752 - 30893788
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||||||| ||||||||||||||||||    
T  30893752 caaagttactattttaaacttcttaacatgtgcaaat 30893788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 41350266 - 41350361
Alignment:
Q  218 aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||||||  | ||||||| | |||||||| ||||    ||||||||||  |||| |||||| |||||| ||||||||||||||||||    
T  41350266 aaatcaacaattatttatta-aaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaacttcttaacatgtgcaaat 41350361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 14466669 - 14466634
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14466669 gggtttgtctaacatgtgcaatattgcacatgttaa 14466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 15241273 - 15241226
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaa 200  Q
    |||||||||||||| | |||||||||||||||||||| | ||||||||    
T  15241273 tgggtttgtctaacatatgcaatattgcacatgttaaagaaactaaaa 15241226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 18150377 - 18150436
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 213  Q
    ||||||||||||| |||||||||||||| ||||||| |  | |||||||| |||||||||    
T  18150377 gggtttgtctaacatgtgcaatattgcatatgttaaagatattaaaagtaataagttttt 18150436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 13516109 - 13516055
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtag 204  Q
    |||||||||| |||||  |||| ||||||||||||||||||| ||||||| ||||    
T  13516109 ttatgggtttatctaatatgtgtaatattgcacatgttaaggaaactaaatgtag 13516055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 16174762 - 16174641
Alignment:
Q  193 aactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattt 291  Q
    ||||||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | |||||||| ||| |   |||||| |||| ||||||||||| ||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatataaa-tgcacaagtttcaattcaaagttactactt 16174664  T
Q  292 taaatttcttaacatgtgcaaat 314  Q
    |||||||||||  ||||||||||    
T  16174663 taaatttcttatgatgtgcaaat 16174641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 33072677 - 33072727
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    |||||| |||| ||||||||||||||||||||||   ||||||||||||||    
T  33072677 gtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaagtagta 33072727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 3738052 - 3737975
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    |||||||||  ||||||| ||||||||||||||   |||||| |||||||| |||||   |||| |||||||||||||    
T  3738052 tttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttcggaaaacaacaattattta 3737975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 8716143 - 8716061
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    ||||| ||||||||||| | |||||||||||| ||||||| | ||||  ||||||||| ||||  | |||| |||||||||||||    
T  8716143 ttatgagtttgtctaacgtatgcaatattgcatatgttaaagaaact--aagtagtaatttttcttggaaaacaacaattattta 8716061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 26376749 - 26376668
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattattta 234  Q
    ||||||||||||| ||||||| |||| |||||||||   || ||| |||||||| ||||| || |||| |||||||||||||    
T  26376749 gggtttgtctaacatgtgcaacattgtacatgttaaaacaaataatagtagtaactttttcttggaaaacaacaattattta 26376668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 28378711 - 28378756
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||||| | |||||||||||||||||||||| |||| |||||||    
T  28378711 tttgtctagcatgtgcaatattgcacatgttaaagtaattaaaagt 28378756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 13761655 - 13761735
Alignment:
Q  140 tattattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||| |||  ||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  13761655 tattattttttcttggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 13761735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 31705114 - 31705047
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg 217  Q
    ||||||| ||| |||||| |||||||  |||||||||||||||  ||| |||||||||||||| |||||    
T  31705114 tttatggatttttctaacatgtgcaaatttgcacatgttaaggatact-aaagtagtaagtttatattg 31705047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 40166249 - 40166309
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 213  Q
    |||||||||||||| |||| | |||||||||||||||   |||||||||||  ||||||||    
T  40166249 tgggtttgtctaacatgtggagtattgcacatgttaaaacaactaaaagtaacaagttttt 40166309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 3e-70; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 46290007 - 46290169
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||    
T  46290007 atgggtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatt 46290106  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46290107 taatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 46290169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 33342987 - 33343147
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  33342987 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatattta 33343086  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33343087 atacaaaatgttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaat 33343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 34270264 - 34270420
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  34270264 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattgaaaccaacaattatttaacaaaaagttatatattta 34270359  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34270360 atacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 34270420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 9331960 - 9332120
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | || |||| | ||||    
T  9331960 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aatgttacatattt 9332058  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  |||||| |||  ||||||||||| |||||| ||||||||||||||||||    
T  9332059 aatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaat 9332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 19889339 - 19889499
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | ||||    
T  19889339 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatattt 19889437  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  19889438 aatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 19889499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 33072052 - 33072140
Alignment:
Q  226 aattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  33072052 aattatttaacaaaaagttatatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaat 33072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 39757287 - 39757129
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | |||| || | ||||||    
T  39757287 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgatta-aaagctacatatttaa 39757189  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || |||| |  ||| || |||   ||||||||||||||||| ||||||||||||||||||    
T  39757188 tataaaaaacacaaatttcaagttaaagttactattttaaacttcttaacatgtgcaaat 39757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 23982935 - 23982774
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||  ||||||||||| ||||||||||||||| |||| |||  ||| ||||||||| |||  | ||| ||| | ||||    
T  23982935 gggtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatattt 23982836  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||  ||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  23982835 aatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaat 23982774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 7170005 - 7170161
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatac 257  Q
    ||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | | ||||||     
T  7170005 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatat 7170104  T
Q  258 aaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||   ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  7170105 aaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 7170161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 314
Target Start/End: Complemental strand, 8091470 - 8091331
Alignment:
Q  176 attgcacatgttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 274  Q
    ||||||||||| || | |||||||||||| || |||||||||||| |||| |||||||||  | ||||||||| |||||| ||||||| |  ||||| ||    
T  8091470 attgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatatttaacacaaaatgtaaaagttaca 8091371  T
Q  275 atgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  8091370 atgcaaagttactattttaaacttcttaacatgtgtaaat 8091331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 149 - 314
Target Start/End: Complemental strand, 24463139 - 24462974
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatac 248  Q
    |||||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||| || ||||||||| |||||| ||||||  | |||  || |     
T  24463139 tttatgggtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaacaacaagtatttattaaaaaactacat 24463040  T
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| ||||| | |||  |  ||  |||||||| ||||||||| ||||||||||||||||||    
T  24463039 atttaatataaaatgtacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaat 24462974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 295
Target Start/End: Complemental strand, 47120384 - 47120232
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaa 241  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||     
T  47120384 tattgttttatgggtttgtctaacatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aat 47120286  T
Q  242 gttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaa 295  Q
    |||| | |||||||| |||| |  ||||||||||  ||||||||||| ||||||    
T  47120285 gttacatatttaatataaaaaacacaagttccaagtcaaagttactaatttaaa 47120232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 151 - 298
Target Start/End: Original strand, 19868109 - 19868257
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||| |||| |||| ||| || |||||||||| || ||||||||| |    
T  19868109 tatgagtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatata 19868208  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaattt 298  Q
    ||||||| ||||||  |||||| |||  |||| |||| ||| |||||||    
T  19868209 tttaatataaaatacacaagtttcaagacaaacttaccattctaaattt 19868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 25709577 - 25709418
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattga-aatcaacaattatttaacagaaagttatacatttaa 254  Q
    |||| |||||| |||| |||||||||||||||||   ||||||||||||||| |||||||||| || ||||||| |||||  | |||| ||   ||||||    
T  25709577 gtttttctaacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaa 25709478  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||  ||||   ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25709477 tatgaaatgaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaat 25709418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 314
Target Start/End: Original strand, 45501451 - 45501618
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttat 246  Q
    ||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||||||| ||||| ||  ||| |||||||||||||    | |||| |    
T  45501451 ttttatgggtttgtctaacatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacagtttt 45501550  T
Q  247 acatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | ||||||||  |||| | ||||||||||| |||| || |||||||||| ||||||| ||||||||||    
T  45501551 atatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaat 45501618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 314
Target Start/End: Original strand, 26300573 - 26300730
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaat 255  Q
    ||||||||||| |||| ||||||||| |||||||   ||||||||||| ||| | | ||||||||  || ||  ||| |  | |||||||||||||||||    
T  26300573 gtttgtctaacatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaaaaaaaaaaatt-attaaaaagttatacatttaat 26300671  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||| |||| |||||||||||||||||| || |||||||||||||||    
T  26300672 acaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaat 26300730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 36548636 - 36548479
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||| |  | ||  ||| | |||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgatta-aatattacatatttaat 36548538  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||| || ||| ||  ||  ||||||||||| |||||| ||||||||||||||||||    
T  36548537 ataaaaaatacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaat 36548479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 5909461 - 5909301
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||| |||| |||| ||| |||||||||||||  | |||| || | ||||    
T  5909461 gggtttgactaacatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttatta-aaagctacatattt 5909363  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  |||||| |||  ||||||||||| |||||| |||||| |||||||||||    
T  5909362 aatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaat 5909301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 3562054 - 3561897
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||| ||||||| |  | |||| || | |||||||    
T  3562054 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgatta-aaagctacatatttaat 3561956  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||| |  ||||||  ||   |||||||||| |||||| ||||||||||||||||||    
T  3561955 ataaaaaacacaagttttaagttaaagttactactttaaacttcttaacatgtgcaaat 3561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 47457638 - 47457480
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattgaaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| ||||||||||||||||||||||   |||||||||||||||  ||||||||||||  ||||||||||||    |||| || |||| ||||    
T  47457638 tttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaataacaattatttatttaaaagctacacatataat 47457539  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||||    || ||||||  ||||||||||| ||||||||| |||||||||||||||    
T  47457538 ataaaatgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaat 47457480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 314
Target Start/End: Complemental strand, 12086109 - 12085950
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||  ||| |||||||||||||||||  | ||||||| | |||||    
T  12086109 ggtttgtctaacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttatta-aaagttaaatattta 12086011  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||| |||| |  |||||| |||  |||| |||||  |||||| ||||||  ||||||||||    
T  12086010 atataaaaaacacaagtttcaagtcaaaattacttatttaaacttcttattatgtgcaaat 12085950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 4969771 - 4969932
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||  ||||| ||| ||| | | |||||||||    |||||| || ||||    
T  4969771 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttttatattt 4969870  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  4969871 aatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 4969932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 24250312 - 24250393
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 234  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| |||| |||| ||| |||||||||||||    
T  24250312 gggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattattta 24250393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 312
Target Start/End: Original strand, 12650819 - 12650977
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacattt 252  Q
    |||||| |||| | |||||||||||| ||||||||||  |||||||| |||||| |||| ||||||| | | ||||||||||  | |||||||||  |||    
T  12650819 gggtttatctagcatgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagttata-tttt 12650917  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 312  Q
    || | |||||| | ||||| |||  |||| |||| |||||||||||||||||||||||||    
T  12650918 aacataaaatactgaagtttcaagacaaacttaccattttaaatttcttaacatgtgcaa 12650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 41572286 - 41572372
Alignment:
Q  222 caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 312  Q
    |||||||||||||  ||||||||||| ||||||||||||||||  ||||    ||||||||||||||||||||| || |||||||||||||    
T  41572286 caacaattatttattagaaagttatatatttaatacaaaatatataagt----atgcaaagttactattttaaactttttaacatgtgcaa 41572372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 7040431 - 7040271
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| | ||||| |||||| ||||||| |||||||||||  | || | |||||| |||| |||||||||||||  | ||| ||||| | ||    
T  7040431 gggtttgtctaacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatata-tt 7040333  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||  ||||||||||  ||||  || || |||||| ||||||||||||||||||    
T  7040332 aatagaaaatacacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaat 7040271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 32117813 - 32117973
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||| |||||| |||||||||||||||||||||||| ||||||| |||| || |||  ||| |||| || |||||| |||  | ||||||||  ||||    
T  32117813 gggtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaatta-ttattaaaaagttatctattt 32117911  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| | ||||| |||||| |||   ||| || | | |||||||||||||||||||||||||    
T  32117912 aatatagaatatacaagtttcaagataaacttgccactttaaatttcttaacatgtgcaaat 32117973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 47708024 - 47707911
Alignment:
Q  194 actaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatttt 292  Q
    ||||||||||  ||| |||||| ||||  |||||||||||||  | ||||||||| |||||||||||||| |  ||||| |||| |||| ||||||||||    
T  47708024 actaaaagtaacaagattttatggaaaaacaacaattatttattaaaaagttatatatttaatacaaaatgtataagtttcaattcaaaattactatttt 47707925  T
Q  293 aaatttcttaacat 306  Q
    ||| ||||||||||    
T  47707924 aaacttcttaacat 47707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 384571 - 384449
Alignment:
Q  192 taactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactatt 290  Q
    |||||||||||||||| |||| ||||||| |||||||||||| |  | |||| || | |||||||| |||| |  ||||||||||   |||||||||| |    
T  384571 taactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagctacatatttaatataaaaaaaacaagttccaagttaaagttactact 384473  T
Q  291 ttaaatttcttaacatgtgcaaat 314  Q
    ||||| ||||||||||||||||||    
T  384472 ttaaacttcttaacatgtgcaaat 384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 39869112 - 39869187
Alignment:
Q  145 ttattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||| ||| ||||||||||||| | |||||||||||||||||||| | |||||||| |||||| |||| |||||||    
T  39869112 ttatcttaagggtttgtctaacatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaa 39869187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 4161869 - 4161939
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 213  Q
    |||||||| | |||| |||||||| |||| ||||||||||||||||| | ||||||||||||||| |||||    
T  4161869 tattatttaaagggtatgtctaacatgtgtaatattgcacatgttaaaggaactaaaagtagtaacttttt 4161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 42750289 - 42750367
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    |||||| |||| |||||||||||||| ||||||| | |||||||| || ||| |||||||||||| ||| |||||||||    
T  42750289 gtttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaacaataattattta 42750367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 12624636 - 12624795
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaa-caattatttaacagaaagttatacattt 252  Q
    |||||||| |||  |||||||||||  |||| ||||||||||||||| |||| | ||||||||||||   | ||||||||||  | ||| || || ||||    
T  12624636 gggtttgtttaagatgtgcaatattatacatattaaggtaactaaaa-tagttattttttattgaaaaatatcaattatttattaaaaacttgtatattt 12624734  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||  ||||||  ||  |||| |||| |||||||||||||||||||||||||||    
T  12624735 aatataaaatacacaagttt-aagacaaacttaccattttaaatttcttaacatgtgcaaat 12624795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 29398218 - 29398153
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  29398218 atttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 29398153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 41331540 - 41331475
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| |||||   ||||||||||  ||||||||||| ||||||||||||| |||||||||||    
T  41331540 atttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaat 41331475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 7899577 - 7899505
Alignment:
Q  242 gttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||||||| ||||||| ||||||  ||  |||| |||| ||||||||||| |||||||||||||||    
T  7899577 gttatatatttaatataaaatatacaagttataagacaaacttaccattttaaattttttaacatgtgcaaat 7899505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 24639535 - 24639619
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattga-aatcaacaattatt 232  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| |||| ||||| | | |  |||||||||| || |||||||||||    
T  24639535 ttttaagggtttgtctaacatgtgcaata-tgcacatgttaaagtaattaaaaatggaatttttttattgacaaacaacaattatt 24639619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 27696703 - 27696740
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  27696703 atgggtttgtctaacatgtggaatattgcacatgttaa 27696740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 38798390 - 38798321
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  38798390 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 38798321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 26037204 - 26037252
Alignment:
Q  266 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||| || |||||||||| |||||||||| |||||||    
T  26037204 caagttccaatacaaaatttctattttaaacttcttaacatctgcaaat 26037252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 26050516 - 26050480
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |||||||||||||||||||||||||||    
T  26050516 caaatttaccattttaaatttcttaacatgtgcaaat 26050480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 26059875 - 26059839
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |||||||||||||||||||||||||||    
T  26059875 caaatttaccattttaaatttcttaacatgtgcaaat 26059839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 28061504 - 28061436
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  28061504 atggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 28061436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 1e-69; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 28943949 - 28943788
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  28943949 tgggtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatattt 28943850  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28943849 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 28943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 14228305 - 14228145
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  14228305 gggtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatattta 14228206  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14228205 atacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 14228145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 17552766 - 17552606
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| ||| ||||| |||||    
T  17552766 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcgaaaccaacaattatttaacaaaaaattatatattta 17552667  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  17552666 atacaaaatgttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaat 17552606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 33017723 - 33017883
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||||| ||||||||| |||||    
T  33017723 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttattaaaaccaacaattatttaacaaaaagttatatattta 33017822  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33017823 atacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaat 33017883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 30591320 - 30591182
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaatca-acaattatttaacagaaagttatacatttaatacaaaatattcaagttccaa 275  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||  | ||||||||||| || |||||||||||||||||||||||||| |||||| |||    
T  30591320 ttgcacatgttaacgcaactaaatgtagtaagtttttattgaaaaaatacaattatttatcaaaaagttatacatttaatacaaaatatacaagttacaa 30591221  T
Q  276 tgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||| |||| ||| ||||||||||||| ||||    
T  30591220 tgcaaaattaccatttaaaacttcttaacatgtgtaaat 30591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 10887024 - 10887188
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||||| ||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||| ||| ||| | |||||||  | |||| || | |    
T  10887024 tatggggttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacata 10887123  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||| ||||||  ||||||||||  |||| |||| | |||||| ||||||||||||||||||    
T  10887124 tttaatataaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaat 10887188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 8977647 - 8977485
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||  ||| |||| ||| ||||||| |||||    ||||||| | |||    
T  8977647 tgggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatt 8977548  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| |||||   |||||| |||| |||| |||||||||| || ||||||||| ||||||||    
T  8977547 taatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaat 8977485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 313
Target Start/End: Complemental strand, 28757664 - 28757506
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagt-aagtttttattgaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||||||||| |||| | ||||||||||||||| | || |||||||| | |||||||||||||||  | ||||||||||  | ||||||||||||||||    
T  28757664 gtttgtctaacatgtgtagtattgcacatgttaaagcaattaaaagtatttaagtttttattgaaaaaatcaattatttattaaaaagttatacatttaa 28757565  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 313  Q
    || ||||  | ||| ||| |||||||||||||||||| ||| || |||| |||||||||    
T  28757564 taaaaaaattacaacttcaaatgcaaagttactatttaaaactttttaatatgtgcaaa 28757506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 31069738 - 31069601
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaa 275  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |  | || |||| | |||||||| |||| |  ||||||||||    
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgatta-aatgttacatatttaatataaaaaacacaagttccaa 31069640  T
Q  276 tgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
      ||||||||||| |||||| ||||||||||||| ||||    
T  31069639 gtcaaagttactaatttaaacttcttaacatgtgtaaat 31069601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 5363071 - 5363006
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  5363071 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaa 5363006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 303
Target Start/End: Complemental strand, 22974731 - 22974603
Alignment:
Q  175 tattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 273  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | ||||||| | |||||||| |||| |  ||||||||    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagttacatatttaatataaaaaacacaagttcc 22974633  T
Q  274 aatgcaaagttactattttaaatttcttaa 303  Q
    ||   ||||||||||||||||| |||||||    
T  22974632 aagttaaagttactattttaaacttcttaa 22974603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 23813670 - 23813798
Alignment:
Q  175 tattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 273  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |  | ||||||| | |||||||| |||| |  ||||||||    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagttacatatttaatataaaaaacacaagttcc 23813768  T
Q  274 aatgcaaagttactattttaaatttcttaa 303  Q
    ||   ||||||||||||||||| |||||||    
T  23813769 aagttaaagttactattttaaacttcttaa 23813798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 34692352 - 34692513
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| | | |||||||||    |||||| || ||||    
T  34692352 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttttatattt 34692451  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  34692452 aatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 34692513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 314
Target Start/End: Original strand, 6016848 - 6017015
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttat 246  Q
    ||||| ||||||||||||| ||||||| |||||||||| ||||  | ||||||||||||| |||| |||| ||| ||||| ||||||   | ||||||||    
T  6016848 ttttaagggtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttat 6016947  T
Q  247 acatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | ||||||||  ||||   ||||||||||  ||||||||| | |||||| || |||||||||||||||    
T  6016948 atatttaatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaat 6017015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 2830857 - 2830700
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | |||| || | |||||||    
T  2830857 tttgtctaacatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagctacatatttaat 2830759  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||| |  ||| ||| ||   ||||||| ||||||||| ||||||||||||||||||    
T  2830758 ataaaaaacacaaattctaaattaaagttattattttaaacttcttaacatgtgcaaat 2830700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 28759194 - 28759033
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagt-aagtttttattgaaatcaa-caattatttaacagaaagttatacatt 251  Q
    ||||||||||||| |||||| || ||||| |||||| | || |||||||| | |||||||||||||    || ||||||||||  | |||||||||||||    
T  28759194 gggtttgtctaacatgtgcattactgcacgtgttaaagcaattaaaagtatttaagtttttattgacgaaaatcaattatttatta-aaagttatacatt 28759096  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||| ||| ||  |||||||||||| ||||  ||| ||||||||||||||||||    
T  28759095 taatacaaaatatacaacttttaatgcaaagttattattcaaaacttcttaacatgtgcaaat 28759033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 28756639 - 28756564
Alignment:
Q  239 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||||||||| ||| ||||||| ||||||||||    
T  28756639 aaagttatacaattaatacaagatatgcaacttccaatgcaaagttactatttaaaacttcttaaaatgtgcaaat 28756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 18332868 - 18332802
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||||||    
T  18332868 gggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaa 18332802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 31169940 - 31169782
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaat 255  Q
    ||||||||||||||||||  |||||||||||||||  ||||||| |||||| ||||  |||||| | || ||||| |||  | |||  || | |||||||    
T  31169940 tttgtctaacctgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaat 31169841  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||||   ||||||||||  ||||||||||| ||||||||| |||||||||||||||    
T  31169840 ataaaatgcacaagttccaagtcaaagttactactttaaatttgttaacatgtgcaaat 31169782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 29863482 - 29863321
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||| |||||| |||  |||| |||  || |||||||||  | |||||| || | ||    
T  29863482 gggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagttttatagtt 29863383  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||||    ||||||| |  |||  ||||||||||||| ||||||||||||||||||    
T  29863382 aatataaaatgcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaat 29863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 30623324 - 30623477
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||| ||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||    
T  30623324 gggtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatattt 30623423  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacat 306  Q
    ||||  |||| | |||||| |||| |||| || |||||||||| ||||||||||    
T  30623424 aatatcaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacat 30623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 1814960 - 1814880
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaa 235  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||||  |  |||||||||||| ||| ||||||||||    
T  1814960 ggtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaacaataattatttaa 1814880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 26602616 - 26602552
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttt 212  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||    
T  26602616 ttttaagggtttgtctaacatgtgcaatattgcacatattaaggaaactaaaagtagtaattttt 26602552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 1017956 - 1017797
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||||||||| ||||||||| |||||||| | |  |||||||||||||||| ||||  ||| ||| |||||||||||||  | ||| ||| | ||||||    
T  1017956 gtttgtctaacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaa 1017857  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || |||||   ||| || |||  ||||||||||| |||||| ||||||||||||| ||||    
T  1017856 tataaaatgcacaactttcaagtcaaagttactactttaaacttcttaacatgtgtaaat 1017797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 31791096 - 31791029
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgtt-aaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||    
T  31791096 gggtttgtctaacatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaa 31791029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 314
Target Start/End: Original strand, 12454066 - 12454224
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||| |||| |||||||||||||||||||||||  || |||| ||||||| |||||||||||| || |||||| |    | |||||| |  |||||||    
T  12454066 gtttgtgtaacatgtgcaatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaacatcaattactatttaaaaagttgtctatttaat 12454165  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | | ||||  ||||||||||  | || |||| ||||||||||| |||| ||||||||||    
T  12454166 atagaatacacaagttccaaaaccaatttaccattttaaattttttaaaatgtgcaaat 12454224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 31503738 - 31503901
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaatt---atttaacagaaagttata 247  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||   ||| ||   ||| || ||||   ||||    
T  31503738 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaa---tata 31503834  T
Q  248 catttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||||||| ||||||  |||||||||||  ||| |||||| |||||||||||||||||||||||||    
T  31503835 tatttaatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaat 31503901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 17596315 - 17596370
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 213  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||||| |||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 2086998 - 2086948
Alignment:
Q  171 gcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat 221  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaat 2086948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 31568111 - 31568268
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||||||||||  ||||||||||||||||||||||||||  || |||||    ||||||||| |||||||||||| ||||    |||| || | ||||    
T  31568111 gggtttgtctaacacgtgcaatattgcacatgttaaggtaatcaagagtag---ctttttattgaaaatcaacaatt-tttattcaaaagctacatattt 31568206  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | || |||| |  |||||| |||  ||||||||||| |||||| || |||||||||||||||    
T  31568207 attataaaaaacacaagtttcaaatcaaagttactactttaaactttttaacatgtgcaaat 31568268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 10345721 - 10345671
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||||||||    
T  10345721 atgggtctgtctaacatgtgcaatattgcacatgttaaagaaactaaaagt 10345671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 1814572 - 1814532
Alignment:
Q  273 caatgcaaagttactattttaaatttcttaacatgtgcaaa 313  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  1814572 caatgcaaagttactattttaaagtttttaacatgtgcaaa 1814532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 3853066 - 3853102
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3853066 caaagttactactttaaatttcttaacatgtgcaaat 3853102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 314
Target Start/End: Original strand, 17154614 - 17154782
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt-attgaaat-caacaattatttaacagaaagtta 245  Q
    ||||| ||||||||| ||| |||| ||||||| ||||||||| | || |||||||| ||| ||||| |||||||  ||| ||| | |||  | ||| |||    
T  17154614 ttttaagggtttgtcaaacatgtgaaatattgtacatgttaaagaaattaaaagtattaatttttttattgaaaaacaataatcaattattaaaaaatta 17154713  T
Q  246 tacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| | ||||  |||||| |||  ||||  || |||||||||||| |||||||||| ||||    
T  17154714 tacatttaatatagaatacacaagtttcaaaacaaacctattattttaaattttttaacatgtgtaaat 17154782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 23936483 - 23936395
Alignment:
Q  226 aattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||  | ||||||||  |||||||| ||||| | ||||||||||   ||||||||||| ||||| || |||||||||||||||    
T  23936483 aattatttattaaaaagttatgtatttaatataaaatgtacaagttccaaaagaaagttactatgttaaacttgttaacatgtgcaaat 23936395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 32615640 - 32615593
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagta 203  Q
    |||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  32615640 gtttgtttaacatgtgtaatattgcatatgttaaggtaactaaaagta 32615593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 10671691 - 10671609
Alignment:
Q  237 agaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatgcaaa 319  Q
    ||||||| ||| ||||||| |||||| |  |||||||||  |||| |||||||||| ||  ||||||||||||||| ||||||    
T  10671691 agaaagtcatatatttaatgcaaaatgtataagttccaaaacaaacttactattttgaacatcttaacatgtgcaattgcaaa 10671609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 24979329 - 24979263
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| | |||||| ||||| ||||||    
T  24979329 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaa 24979263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 34243298 - 34243344
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaacta 197  Q
    |||| ||||||||||  |||||||||||||||||||||| |||||||    
T  34243298 tatgagtttgtctaaaatgtgcaatattgcacatgttaaagtaacta 34243344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 2087032 - 2086999
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgtta 188  Q
    |||||||||||| |||||||||||||||||||||    
T  2087032 ggtttgtctaacatgtgcaatattgcacatgtta 2086999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 3261184 - 3261237
Alignment:
Q  261 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||| ||||||||||| |||||||||| || |||||||||| ||||    
T  3261184 atatacaagttctaatgcaaagtttctattttaaactttttaacatgtgtaaat 3261237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 2161386 - 2161546
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  2161386 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatattta 2161485  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2161486 attcaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 2161546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 3306234 - 3306074
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||     
T  3306234 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagttatatatttg 3306135  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3306134 atacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaat 3306074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 161 - 314
Target Start/End: Complemental strand, 26364162 - 26364009
Alignment:
Q  161 tctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaa 260  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||    
T  26364162 tctaacatgtgcaatattgcacatgttaaggtaactaaaagtagaaagtttttattaaaatcaacaattatttaacaaaaagttatacaattaatagaaa 26364063  T
Q  261 atattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26364062 atgttcaagttccaatgcaaagttactattttaaatttcttaacatgcgcaaat 26364009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 152 - 312
Target Start/End: Original strand, 12131979 - 12132140
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| ||||||| |||||||||||||| | |||||||||||| || ||||||||||||  | |||| ||||||  | ||||||||| ||    
T  12131979 atgggtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatat 12132078  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaa 312  Q
    |||||| ||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  12132079 ttaatataaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaa 12132140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 314
Target Start/End: Original strand, 26682068 - 26682227
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttt-tattgaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| |||| |||||||| |||||||||||||  | |||| || ||||||||    
T  26682068 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaacaacaattatttattaaaaagctacacatttaa 26682167  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || |||||   ||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  26682168 tataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaat 26682227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 13328120 - 13327960
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | || |||| | ||||    
T  13328120 gggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aatgttacatattt 13328022  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  |||||| |||  ||||||||||| |||||| ||||||||||||||||||    
T  13328021 aatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaat 13327960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 10129100 - 10129262
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| |||| ||| ||||||||||| |  | |||| || | ||    
T  10129100 atgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgatta-aaagctacatat 10129198  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||| |  ||||||||||   ||| |||||| |||||| ||||||||||||||||||    
T  10129199 ttaatataaaaaacacaagttccaagttaaaattactactttaaacttcttaacatgtgcaaat 10129262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 7140639 - 7140478
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |  | |||  || | |||    
T  7140639 tgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgatta-aaaactacatatt 7140541  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| |||| |  ||||||||||   ||| |||||| |||||| ||||||| ||||||||||    
T  7140540 taatataaaaaacacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaat 7140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 14816305 - 14816145
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||| ||| ||||||||| |||  | ||| ||| | ||||    
T  14816305 gggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatattt 14816206  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||||  ||||||  ||  ||||||||||| ||||||||||||| |||||||||||    
T  14816205 aata-taaatacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaat 14816145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 14829435 - 14829595
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||| ||| ||||||||| |||  | ||| ||| | ||||    
T  14829435 gggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatattt 14829534  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||||  ||||||  ||  ||||||||||| ||||||||||||| |||||||||||    
T  14829535 aata-taaatacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaat 14829595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 20514630 - 20514792
Alignment:
Q  154 gggtttgtctaacctgtgcaa-tattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaac-aattatttaacagaaagttatacatt 251  Q
    ||||||||||||| ||||||| ||||||||||| ||| | |||| |||||||||| || |||||||||   || |||||||||  | ||||||||| |||    
T  20514630 gggtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatatatt 20514729  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| ||||| | ||||||||||  |||| |||| ||||||||||||||||| |||||||||    
T  20514730 taatataaaatgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaat 20514792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 36967250 - 36967089
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| |||| ||||||||||  |||||| |||||||| ||||| ||| ||| |||||||||| ||    |||||| || ||||    
T  36967250 gggtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttttatattt 36967151  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | |||||| |||| ||||||| |||||||||| ||||||||||||||||||    
T  36967150 aatattaaatgtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaat 36967089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 9743855 - 9744013
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttata 247  Q
    ||||| |||||||||||| ||||||||||||  |||||||||  ||||||||||||||| ||||||||| ||| |||||||||||||  | ||||||| |    
T  9743855 tttattggtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttatta-aaagttaca 9743953  T
Q  248 catttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatg 307  Q
     |||||||| |||| |   |||||||||  ||||||||||| |||||| |||||| ||||    
T  9743954 tatttaatataaaaaacataagttccaagtcaaagttactactttaaacttcttatcatg 9744013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 35678452 - 35678294
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||||||| |||| |||| ||| ||||||||| |||  | ||| ||| | ||||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaa 35678353  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||  |||||  |||||| |||  ||||||||||| |||||| |||||| |||||||||||    
T  35678352 ta-taaatacacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaat 35678294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 4080574 - 4080413
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | |||    
T  4080574 tgggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatt 4080475  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  ||||   |||||| |||  ||||||||||| ||||||||||||| |||||||||||    
T  4080474 taata-taaatgcacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaat 4080413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 39701979 - 39701822
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  ||| ||| |||||||||  |||   ||||||| | |||||||    
T  39701979 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaatta-ctaattaaaagttacatatttaat 39701881  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||| |  ||| || |||  ||||||||||| |||||| || |||||||||||||||    
T  39701880 ataaaaaacacaaatttcaagtcaaagttactactttaaacttgttaacatgtgcaaat 39701822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 314
Target Start/End: Complemental strand, 40211005 - 40210840
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttata 247  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||| |||| ||| ||||||||||| |  | || |||| |    
T  40211005 tttaagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgatta-aatgttaca 40210907  T
Q  248 catttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||||||| |||| |  ||| ||| ||  ||||||||||| ||||||  |||||||||||||||||    
T  40210906 tatttaatataaaaaacacaaattcaaagtcaaagttactaatttaaacgtcttaacatgtgcaaat 40210840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 31812108 - 31812272
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||| |||  || | |||||||  | |||| || | |    
T  31812108 tatgggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacata 31812207  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  ||||   ||||||||||  |||| |||| |||||||| ||||||| ||||||||||    
T  31812208 tttaatatgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaat 31812272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 45005966 - 45006128
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||    
T  45005966 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatat 45006065  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||  | || | || |||||||| |||| || |||||||||| ||||||||||||||||||    
T  45006066 ttaatattagatgtacatgttccaatacaaaatt-ctattttaaacttcttaacatgtgcaaat 45006128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 4084723 - 4084562
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | |||    
T  4084723 tgggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatt 4084624  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  ||||    ||||| |||  ||||||||||| ||||||||||||| |||||||||||    
T  4084623 taata-taaatgcataagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaat 4084562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 4103030 - 4102869
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| |||| ||||||||||||||||||| || |||||||||||| |||| ||||||| | |||||||| |||  | ||| ||| | |||    
T  4103030 tgggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatt 4102931  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  ||||    ||||| |||  ||||||||||| ||||||||||||| |||||||||||    
T  4102930 taata-taaatgcaaaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaat 4102869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 19344016 - 19343855
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | ||||    
T  19344016 gggtttgtcttacatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagta-aaagttacatattt 19343918  T
Q  253 aata-caaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| || |||||| |||  |||| |||||| ||||||  | |||||||||||||||    
T  19343917 aatattaaaaaatacaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaat 19343855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 38527811 - 38527885
Alignment:
Q  146 tattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| |||| |||||||    
T  38527811 tatttaatgggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaa 38527885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 38843702 - 38843863
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||    
T  38843702 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatattt 38843801  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | |||||||||||  ||| ||  ||||||||| |||||| |||||||||||    
T  38843802 aatattaaatgtacaagttccaataaaaaatttatattttaaacttcttagcatgtgcaaat 38843863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 314
Target Start/End: Original strand, 9801681 - 9801827
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 266  Q
    |||||||||||| |||| |||| |||| |||||||||||| |||| |||| ||||||||||||||| |  | ||||||||| |||||||| || | |       
T  9801681 tgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgatta-aaagttatatatttaatataacaaacat 9801779  T
Q  267 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||| |||  ||||||||||| |||||| ||||||||||||||||||    
T  9801780 aagtttcaagtcaaagttactactttaaacttcttaacatgtgcaaat 9801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 314
Target Start/End: Original strand, 26834545 - 26834720
Alignment:
Q  140 tattattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacag 238  Q
    |||||||||| |  ||||||||||||| | ||||| |||||||||| |||| || ||||||||||||| ||||||||||||  ||| | |||||||  |     
T  26834545 tattattattattagggtttgtctaacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaa 26834644  T
Q  239 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| || | ||||||||  ||||   ||||||||||  |||| |||| |||||||||||||||| || |||||||    
T  26834645 aaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaat 26834720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 39703455 - 39703510
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttt 212  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  39703455 tttgtctaacgtgtgcaatattgcacatgttaaggtaactaaaagtagtaactttt 39703510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 314
Target Start/End: Original strand, 6818010 - 6818176
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttata 247  Q
    |||| ||||||||||||| |||||||||||| | ||||||| | |||||||| |||||| |||  |||| |||  ||||||||||||  | |||||| ||    
T  6818010 tttaagggtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtttta 6818109  T
Q  248 catttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     | |||||| |||||   |||||||| || |||  ||||||||||||| |||||||||||| |||||    
T  6818110 tagttaatataaaatgcacaagttccgatacaattttactattttaaacttcttaacatgtacaaat 6818176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 15198984 - 15198919
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||| |||||||| |||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  15198984 atttaattcaaaatatacaagttacaatgcaaagttactatttaaaattttttaacatgtgcaaat 15198919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 297179 - 297254
Alignment:
Q  239 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| ||| |||||||||| | |||||| |||| |||||||| ||||||||| ||||||||||||||||||    
T  297179 aaagttatatattaaatacaaaatgtacaagtttcaatacaaagttattattttaaacttcttaacatgtgcaaat 297254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 8284750 - 8284687
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt 216  Q
    |||||||||||||| |||||| ||||||||||||||| | ||||||||||||||| ||||||||    
T  8284750 tgggtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttatt 8284687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 287
Target Start/End: Complemental strand, 11117179 - 11117051
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta-acagaaagttatacat 250  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||       || ||||||||||||  ||||||||||||   | ||||||||||||    
T  11117179 atgggtttgtctaacatgtgcaatattgcacatgttaaagcaactaa-------aattttttattgaaa-aaacaattatttatgtaaaaagttatacat 11117088  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttact 287  Q
    ||||||||||||||  |||||| |||  |||||||||    
T  11117087 ttaatacaaaatatataagttctaataaaaagttact 11117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 33514680 - 33514614
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||  |||||||||||    
T  33514680 gggtttgcctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaa 33514614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 7750667 - 7750732
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||||||||||| ||||||||||||||||||||||   |||||||||||| || ||||||||||||    
T  7750667 ggtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaa 7750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 197 - 314
Target Start/End: Original strand, 44091360 - 44091477
Alignment:
Q  197 aaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaat 296  Q
    ||||||| ||| |||||||||||| |||||||||||||  | |||  || | |||||||| |||||   ||||||| ||  ||||||||||| |||||||    
T  44091360 aaaagtattaattttttattgaaaacaacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaat 44091459  T
Q  297 ttcttaacatgtgcaaat 314  Q
    |||||||||| |||||||    
T  44091460 ttcttaacatatgcaaat 44091477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 9580291 - 9580128
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattattta-acagaaagttataca 249  Q
    ||||||||||||||  ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||  || |||  | || |    
T  9580291 atgggtttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaaaaat-tata 9580193  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  |||| | |||||| |||| |||| || |||||||||| ||||||||||||| ||||    
T  9580192 tttaatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaat 9580128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 12189770 - 12189607
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaa-cagaaagttataca 249  Q
    |||||||||| |||| ||||||  ||||||||||||||   |||||| |||| ||| ||||| ||||||  |||||||||||||  || ||| || || |    
T  12189770 atgggtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt-tata 12189672  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  |||| | |||||||||||  |||||| |||||||||| |||||| |||||||||||    
T  12189671 tttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaat 12189607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 12434198 - 12434035
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaa-cagaaagttataca 249  Q
    |||||||||| |||| ||||||  ||||||||||||||   |||||| |||| ||| ||||| ||||||  |||||||||||||  || ||| || || |    
T  12434198 atgggtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt-tata 12434100  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  |||| | |||||||||||  |||||| |||||||||| |||||| |||||||||||    
T  12434099 tttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaat 12434035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 28015032 - 28014877
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatac 257  Q
    ||||||||| |||||||| || |||| |||||  ||||| |  | ||||| ||||| || ||| |||||||||||||    |||||| || ||||||||     
T  28015032 ttgtctaacatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa-caacaattatttattcaaaagttttatatttaatat 28014934  T
Q  258 aaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  28014933 taaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 28014877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 7393352 - 7393264
Alignment:
Q  225 caattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||  | ||||||||| |||||||| ||||||  |||||| |||  |||| |||||||||||||||| |||||||||||||||    
T  7393352 caattatttattaaaaagttatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaattttttaacatgtgcaaat 7393264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 10543819 - 10543742
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  10543819 tattattttatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 10543742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 180 - 314
Target Start/End: Original strand, 5573312 - 5573445
Alignment:
Q  180 cacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgc 278  Q
    ||||||||||  ||||||||| ||  |||||||||||||||  ||||||| |||||  | ||||||||| ||  |||||||||| |  |||||| |||||    
T  5573312 cacatgttaaaataactaaaaataacaagtttttattgaaaaacaacaatcatttattaaaaagttatatat--aatacaaaatgtataagttctaatgc 5573409  T
Q  279 aaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||  || ||||||||| |||||||||||| |||||    
T  5573410 aaaagtattattttaaacttcttaacatgtacaaat 5573445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 13496922 - 13496866
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaa 200  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||| | ||||||||    
T  13496922 attactttttgggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaa 13496866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 27874855 - 27874700
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatac 257  Q
    ||||||||| |||||||| || |||| |||||  ||||| |  | ||||| ||||| || ||| |||||||||||||    |||||| || ||||||||     
T  27874855 ttgtctaacatgtgcaatgttacacaagttaaaataacttattgcagtaacttttttttaaaa-caacaattatttattcaaaagttttatatttaatat 27874757  T
Q  258 aaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||| | ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  27874756 taaatgtacaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaat 27874700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 39025012 - 39024876
Alignment:
Q  178 tgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatg 277  Q
    ||||||| | |||| ||||||||||| ||| |||||||||||| ||||||||| |||  | |||  || | | |||||| |||||   ||| ||||||      
T  39025012 tgcacatctaaaggcaactaaaagtaataactttttattgaaaccaacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagt 39024913  T
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||||| |||||| |||||||||||    
T  39024912 caaagttactactttaaacttcttatcatgtgcaaat 39024876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 11923005 - 11923048
Alignment:
Q  146 tattttatgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||||||||||||||| |||||||||||||||| |||||    
T  11923005 tattttatgggtttgtctaacatgtgcaatattgcacaagttaa 11923048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 45516316 - 45516367
Alignment:
Q  183 atgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    |||||||| |||||||||||||||| ||||||||||||  ||||||||||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaactaacaattattta 45516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 35583423 - 35583520
Alignment:
Q  211 tttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtg 309  Q
    |||||||||| ||||||||||||   | ||| ||||| |||||||||||||||  |||||| ||||| ||| ||| ||||||||| ||||| |||||||    
T  35583423 tttattgaaaacaacaattatttgttaaaaa-ttatatatttaatacaaaatacacaagtttcaatgtaaacttaatattttaaacttcttcacatgtg 35583520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 314
Target Start/End: Original strand, 39430522 - 39430645
Alignment:
Q  193 aactaaaagtagtaagtttttattgaaatcaa---caattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactat 289  Q
    |||||||||||||||||||| |||||||  ||   ||||||||||  | ||| |||||||||||||| |||||||  || ||  |||  |||||||||||    
T  39430522 aactaaaagtagtaagttttgattgaaaaaaaaaacaattatttattaaaaa-ttatacatttaatataaaatatataaattttaatataaagttactat 39430620  T
Q  290 tttaaatttcttaacatgtgcaaat 314  Q
    || ||| || |||||||||||||||    
T  39430621 ttaaaactttttaacatgtgcaaat 39430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 40226146 - 40226006
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaagt--ttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttcc 273  Q
    ||||||||||||| | || |||||||||| |||  |||||||||||  |||||||||||||    ||| ||||| ||||| |||||||| |  || || |    
T  40226146 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatatttattacaaaatgtataaatttc 40226047  T
Q  274 aatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| || | ||| |||| ||||||||||||||||||    
T  40226046 aatgcaaaatttcaattataaacttcttaacatgtgcaaat 40226006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 43717733 - 43717684
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||||||||||| |||||||| ||||||||||||| | ||||||||||    
T  43717733 tgggtttgtctaacatgtgcaatgttgcacatgttaaagcaactaaaagt 43717684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 1203602 - 1203666
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||| | ||||||||||||||| ||||| |||||||||  ||||| |||| |||||||    
T  1203602 gtttgtctaacatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaa 1203666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 14961730 - 14961682
Alignment:
Q  266 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||| ||||||||||||| |||||| |||||||||||    
T  14961730 caagttccaatacaaaattactattttaaacttcttagcatgtgcaaat 14961682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 40716273 - 40716321
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagt 202  Q
    |||||| |||||| ||||||||||||||||||||||  |||||||||||    
T  40716273 gggtttatctaacatgtgcaatattgcacatgttaatctaactaaaagt 40716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 16832498 - 16832435
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt 216  Q
    |||||||||||| | |||||| |||||||||||||||||  |||||||| || || ||||||||    
T  16832498 tgggtttgtctatcatgtgcagtattgcacatgttaaggatactaaaagaagcaactttttatt 16832435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 35746068 - 35745989
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatt 232  Q
    ||||||||||||| |||||||||||| |  |||||| ||||||||||| | ||| |||| ||||||| | ||||||||||    
T  35746068 gggtttgtctaacatgtgcaatattgaaattgttaaagtaactaaaagaaataacttttcattgaaaacaaacaattatt 35745989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 42781659 - 42781589
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||| ||| |||||| |||||||  |||||||||||||||  ||| |||||||||||||| ||||||||    
T  42781659 tttatggatttttctaacatgtgcaaatttgcacatgttaaggatact-aaagtagtaagtttatattgaaa 42781589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 9824957 - 9825023
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| | |||||||||| | ||||||| | || ||||| |||||| ||||||||||||    
T  9824957 gggtttgtctaacatatgcaatattgtatatgttaatgcaattaaaattagtaactttttattgaaa 9825023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 44222611 - 44222533
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    ||||||||||| | || ||||||||||||||||| | |||||||| ||  |  |||||||| ||| |||||||||||||    
T  44222611 gtttgtctaacatatgtaatattgcacatgttaaagcaactaaaactaacatctttttattaaaaacaacaattattta 44222533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 18567480 - 18567435
Alignment:
Q  269 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  ||||||||||| |||||| ||||||||||||||||||    
T  18567480 gttccaagtcaaagttactaatttaaacttcttaacatgtgcaaat 18567435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 6141759 - 6141807
Alignment:
Q  266 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||| |||| ||| ||||||||||||||||| ||| ||||||||||    
T  6141759 caagttctaatgtaaaattactattttaaatttcctaatatgtgcaaat 6141807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 50352301 - 50352461
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  50352301 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatattta 50352400  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50352401 atacaaaatgttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaat 50352461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 155 - 314
Target Start/End: Complemental strand, 9759320 - 9759161
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  9759320 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaa 9759221  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9759220 tacaaaatgttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 9759161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 39876844 - 39876989
Alignment:
Q  169 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaa 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||| |||||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagttatatatttgatacaaaatgttcaa 39876943  T
Q  269 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39876944 gttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 39876989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 148 - 314
Target Start/End: Original strand, 40049551 - 40049717
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttata 247  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||    
T  40049551 ttttatgggtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatagaaaccaacaattatttaacaaaaaattata 40049650  T
Q  248 catttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||||||| ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40049651 tatttaataaaaaatgttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaat 40049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 34941274 - 34941437
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||||||  || ||||||||||||  |||||| ||||||  | ||||||||| ||    
T  34941274 atgggtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatat 34941373  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | |||||||||| | |||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  34941374 taaatacaaaatgtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaat 34941437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 157 - 314
Target Start/End: Original strand, 51691343 - 51691500
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||  ||||||| |||||||||||||| | |||||||| |||||||| |||||||||| | || |||||||||  | |||| |||| |||||||    
T  51691343 tttgtctaaaatgtgcaacattgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattatttattaaaaagctatatatttaat 51691441  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51691442 tcaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaat 51691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 10658527 - 10658436
Alignment:
Q  223 aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10658527 aacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaat 10658436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 10872672 - 10872581
Alignment:
Q  223 aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  10872672 aacaattatttaacaaaaagttatatatttaatacaaaatgttcaagtttcaatgtaaagttactattttaaattttttaacatgtgcaaat 10872581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 10658624 - 10658542
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaa 235  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  10658624 tgggtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaa 10658542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 10872769 - 10872687
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaa 235  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  10872769 tgggtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaa 10872687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 2096867 - 2097030
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| |||||||||||||||| |||||   ||||||||||   || ||||||||||||  |||||||||||||  | ||||||||| ||    
T  2096867 atgggtttgtctaacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatat 2096966  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||||   ||||||||||| |||| |||| ||||| || ||||||||||||||||||    
T  2096967 ttaatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaat 2097030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 314
Target Start/End: Original strand, 23545465 - 23545635
Alignment:
Q  145 ttattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagt 243  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||    
T  23545465 ttattttatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagt 23545564  T
Q  244 tatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | || ||||||||  |||| | ||| ||||||| |||| ||  ||||||||| || |||||||||||||||    
T  23545565 tttatatttaatattaaatgtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaat 23545635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 19451076 - 19450919
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaata 256  Q
    ||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || ||||||||    
T  19451076 ttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaata 19450977  T
Q  257 caaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
      |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  19450976 ttaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 19450919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 52391296 - 52391457
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||  |||| ||| |||||||||||||  ||||||| |||||||| ||||| ||||||  |||||||||||||    |||||| || ||||    
T  52391296 gggtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatattt 52391395  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  52391396 aatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 52391457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 155 - 314
Target Start/End: Original strand, 19468193 - 19468353
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||    |||||| || |||||    
T  19468193 ggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatattta 19468292  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||  |||| | |||||| |||| |||| || |||||||||| ||||||||||||||||||    
T  19468293 atattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaat 19468353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 17409821 - 17409983
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta-acagaaagttatacat 250  Q
    |||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||  || ||| || || ||    
T  17409821 tgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt-tatat 17409919  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||  |||| | ||||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  17409920 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaat 17409983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 8736990 - 8736830
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| ||||||||| ||| ||| | |||||||  | ||||||| | ||||    
T  8736990 gggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatattt 8736891  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  ||||   | ||||||||  ||||||||| | |||||||||||||||||||||||||    
T  8736890 aatatgaaatgcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaat 8736830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 24684834 - 24684996
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt--gaaatcaacaattatttaacagaaagttatacatt 251  Q
    |||||||| |||| | ||||| ||| ||||||||||   |||||| |||||||| ||||| ||  |||| |||||||||||||    |||||| || |||    
T  24684834 gggtttgtttaacatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagttttatatt 24684933  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  |||| | |||||||||||||||| || |||||||||| ||||||||||||||||||    
T  24684934 taatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaat 24684996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 314
Target Start/End: Complemental strand, 29190981 - 29190835
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 266  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | || |||  | ||||||||  ||| |  |    
T  29190981 tgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aatgttgcatatttaatattaaaaacac 29190883  T
Q  267 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  29190882 aagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaat 29190835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 314
Target Start/End: Complemental strand, 54495831 - 54495656
Alignment:
Q  140 tattattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacag 238  Q
    |||||||||| |  ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||  ||| | |||||||  |     
T  54495831 tattattattattagggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaa 54495732  T
Q  239 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| || | ||||||||  ||||   ||||||||||   |||||||| | |||||| ||||||||||||||||||    
T  54495731 aaagctacatatttaatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaat 54495656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 305
Target Start/End: Complemental strand, 13009913 - 13009783
Alignment:
Q  176 attgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 274  Q
    |||||| |||||||   ||||||||||| |||||||||||||||| | || |||||||||  | |||| |||| |||||||||||||||| |||||||||    
T  13009913 attgcatatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagctatatatttaatacaaaatatacaagttcca 13009814  T
Q  275 atgcaaagttactattttaaatttcttaaca 305  Q
    |||  ||||| |||||| ||| |||||||||    
T  13009813 atgtgaagttgctatttaaaacttcttaaca 13009783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 49228355 - 49228421
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  49228355 gggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaa 49228421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 7349687 - 7349847
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||| ||| |||| |||| ||| ||||||||||||   | ||||||| | ||||    
T  7349687 gggtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgtta-aaagttacatattt 7349785  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||  ||  ||||||||||| |||||| |||||| ||||| |||||    
T  7349786 aatataaaaaacacaagttttaagtcaaagttactactttaaacttcttatcatgtacaaat 7349847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 16667564 - 16667403
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| |||| |||| ||| ||||| |||||||  | |||| || | ||||    
T  16667564 gggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatattt 16667465  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||  |||||| |||   ||| |||  |||||||| ||||||||||||||||||    
T  16667464 aatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaat 16667403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 27019258 - 27019419
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||    
T  27019258 gggtttgtctaacgtgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatattt 27019357  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | |||||| |||| |||| || |||||||||| || ||||||| |||||||    
T  27019358 aatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatatgcaaat 27019419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 49181074 - 49181231
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaata 256  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||| ||  ||| |||| ||| ||||||| |||||    ||||||| | ||||||||    
T  49181074 ttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaata 49181173  T
Q  257 caaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
     |||||   |||||| |||| |||| |||||||||| || ||||||||| ||||||||    
T  49181174 taaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaat 49181231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 314
Target Start/End: Complemental strand, 47327083 - 47326911
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaa 241  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||  | ||||||||||||| |||| |||| ||| ||| | |||||||  | |||    
T  47327083 tattgttttaagggtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaa 47326984  T
Q  242 gttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
      || | ||||||||  ||||    |||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  47326983 actacatatttaatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 47326911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 314
Target Start/End: Complemental strand, 47341879 - 47341707
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaa 241  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||  | ||||||||||||| |||| |||| ||| ||| | |||||||  | |||    
T  47341879 tattgttttaagggtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaa 47341780  T
Q  242 gttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
      || | ||||||||  ||||    |||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  47341779 actacatatttaatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 47341707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 36000122 - 36000040
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 232  Q
    |||| |||| |||||| | |||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  36000122 tatgagtttatctaacatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattatt 36000040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 49650210 - 49650288
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatt 232  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| ||| ||| | ||||||||||    
T  49650210 ggtttgtctaacctgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattatt 49650288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 23553571 - 23553648
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattg-aaatcaacaattatt 232  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||||    
T  23553571 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattatt 23553648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 314
Target Start/End: Complemental strand, 10389446 - 10389287
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||||||| ||| |||| |||| ||| ||||||||||| |  | ||||||| | ||||     
T  10389446 ggtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattattgatta-aaagttacatatttc 10389348  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||| |||| |  ||||||| ||  |||| |||||| || |||||| |||||||||||||||    
T  10389347 atataaaaaacacaagttctaagtcaaaattactacttgaaattttttaacatgtgcaaat 10389287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 48911016 - 48910965
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagta 203  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  48911016 atgggtttgtctaacatgtgcaatattgcacatgttaagataactaaaagta 48910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 49332331 - 49332397
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||| ||| |||| |||||||    
T  49332331 gggtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaa 49332397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 55813927 - 55814023
Alignment:
Q  218 aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||||||  | ||||||||| |||||||||| ||| | ||| || |||| |||| ||| ||||||||| || |||||||||||||||    
T  55813927 aaatcaacaattatttattaaaaagttatatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatgtgcaaat 55814023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 314
Target Start/End: Complemental strand, 19838872 - 19838710
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacat 250  Q
    ||||| |||||||||| |||| || ||||||||||||||   |||||| |||| ||| ||||| || ||| |||||||||||||    |||||| || ||    
T  19838872 tatggatttgtctaacatgtggaacattgcacatgttaaaacaactaatagtaataactttttttttaaa-caacaattatttattcaaaagttttatat 19838774  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||  |||| | ||||||||||| |||| || ||||||||||    |||||||||||||||    
T  19838773 ttaatattaaatgtacaagttccaatacaaaatttctattttaaacgggttaacatgtgcaaat 19838710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 27362389 - 27362550
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||| |||||| |  |||| |||||| |||||||| || ||||||||||||| ||||||||| ||| ||| | ||||||| || |||| || | ||||    
T  27362389 gggtttatctaacatacgcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatattt 27362488  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  ||||   ||| ||||||  |||| |||| | |||||| ||||||||||||||||||    
T  27362489 aatatgaaatgcacaaattccaagtcaaaattaccactttaaacttcttaacatgtgcaaat 27362550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 10813658 - 10813594
Alignment:
Q  170 tgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattt 233  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||||||||| ||| ||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattattt 10813594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 36968286 - 36968338
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    |||||| |||||| ||||||||||| |||||||||| ||||||||||||||||    
T  36968286 gggtttatctaacatgtgcaatattacacatgttaaagtaactaaaagtagta 36968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 40682555 - 40682591
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||||||||||||||||||||||||||    
T  40682555 caaagttactattttaaatttcttaacatgtgcaaat 40682591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 1378066 - 1378177
Alignment:
Q  203 agtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttctta 302  Q
    ||||| || ||||||||| || ||||||||||  | || |||||| ||||||||  |||| | |||||| |||   ||| |||| |||||||||||||||    
T  1378066 agtaatttgttattgaaaacatcaattatttattaaaatgttatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttctta 1378165  T
Q  303 acatgtgcaaat 314  Q
    ||||||||||||    
T  1378166 acatgtgcaaat 1378177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 27756574 - 27756712
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 266  Q
    |||||||||||||||||||||||| ||||||| |||| || |||  ||| |||| || |||||| |||  | ||||||||  |||||||| | ||||| |    
T  27756574 tgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaatta-ttattaaaaagttatctatttaatatagaatatac 27756672  T
Q  267 aagttccaatgcaaagttactattttaaatttcttaacat 306  Q
    ||||| |||  |||| || ||| |||||||||||||||||    
T  27756673 aagtttcaagacaaacttgctactttaaatttcttaacat 27756712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 9327061 - 9326983
Alignment:
Q  142 ttattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||| |||| |||||||||||||| | |||||||||||| ||||||| | ||||||  ||||||| |||| |||||||    
T  9327061 ttatttttttttgggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaa 9326983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 9373783 - 9373705
Alignment:
Q  142 ttattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||| |||| |||||||||||||| | |||||||||||| ||||||| | ||||||  ||||||| |||| |||||||    
T  9373783 ttatttttttctgggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaa 9373705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 18882351 - 18882286
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||  |||| | ||||||||||| |||| || |||||||||| ||||||||||||||||||    
T  18882351 atttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaat 18882286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 1377452 - 1377504
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    |||||||||||||  |||||||||| |||||||||| |||| |||||||||||    
T  1377452 gggtttgtctaacacgtgcaatattacacatgttaaagtaattaaaagtagta 1377504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 3085348 - 3085416
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||||| ||||||| ||||||||||||||   || ||| |||||||| ||||| ||||||    
T  3085348 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaattttttcttgaaa 3085416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 6875501 - 6875609
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||||||||| | ||||||||||||||||||||   |||||||| ||||||  ||||||| ||||  | ||||||||||    ||||||||| ||||||    
T  6875501 gtttgtctaacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagttataaatttaa 6875600  T
Q  255 tacaaaata 263  Q
    || ||||||    
T  6875601 tataaaata 6875609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 9382089 - 9382017
Alignment:
Q  148 ttttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||| |||||||||||||| | |||||||||||| ||||||| | ||||||  ||||||| |||| |||||||    
T  9382089 ttttctgggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaa 9382017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 25843291 - 25843355
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||| ||| ||||||   ||||||||| | ||||||||||||||| ||||||||||||    
T  25843291 gtttgtctaacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaa 25843355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 40681961 - 40682013
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||||||||||||| ||||||||  |||||||| |||||| ||||||||||||    
T  40681961 tgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaa 40682013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 314
Target Start/End: Complemental strand, 41415703 - 41415576
Alignment:
Q  187 taaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagtta 285  Q
    ||||| ||||||||||||||| |||| |||| |||||||||||||||||  | |||| || | |||||||| |||| |  ||| || |||  ||||||||    
T  41415703 taaggcaactaaaagtagtaacttttaattgaaaatcaacaattatttatta-aaagctacatatttaatataaaaaacacaaatttcaagtcaaagtta 41415605  T
Q  286 ctattttaaatttcttaacatgtgcaaat 314  Q
    ||| |||||| || ||| |||||||||||    
T  41415604 ctactttaaacttattatcatgtgcaaat 41415576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 45742351 - 45742431
Alignment:
Q  140 tattattatt-ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaa 219  Q
    |||||||||| ||| ||||||||||||| ||||||| ||||||||||||||   |||||| |||| ||| ||||| |||||    
T  45742351 tattattattattaagggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtattaactttttcttgaa 45742431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 314
Target Start/End: Original strand, 53961350 - 53961481
Alignment:
Q  183 atgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaa 281  Q
    ||||||| ||||||||||||||||| |||| |||| |||||||||||||||    | || |||| | |||||||| |||| |  ||| || |||  ||||    
T  53961350 atgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattattgttta-aatgttacatatttaatataaaaaacacaaatttcaagtcaaa 53961448  T
Q  282 gttactattttaaatttcttaacatgtgcaaat 314  Q
     |||||| |||||| ||||||||||||||||||    
T  53961449 attactaatttaaacttcttaacatgtgcaaat 53961481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 9971744 - 9971710
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgtta 188  Q
    ||||||||||||| |||||||||||||||||||||    
T  9971744 gggtttgtctaacatgtgcaatattgcacatgtta 9971710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 33632379 - 33632222
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaat 255  Q
    |||||||||| ||||||| |||  |||||| ||   |||||| |||||||| ||||| ||||||  |||||||||||||    |||||| || |||||||    
T  33632379 tttgtctaacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatatttaat 33632280  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |  |||| | |||||| ||||  ||| || |||||||||| || |||||||||||||||    
T  33632279 attaaatgtacaagtttcaatataaattt-ctattttaaactttttaacatgtgcaaat 33632222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 41887752 - 41887682
Alignment:
Q  150 ttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  41887752 ttatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 41887682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 32459327 - 32459396
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||| ||| |||||| |||||||  |||||||||||||||  |||||||| || || ||||||||||||    
T  32459327 tatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaa 32459396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 48910947 - 48910902
Alignment:
Q  188 aaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 232  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  48910947 aaggtaactaaaagtagtaattttttattgaaaattaacaattatt 48910902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 51070490 - 51070425
Alignment:
Q  239 aaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaac 304  Q
    ||||||||| |||||||| ||||||  |||||| |||  |||| |||| |||||||||||||||||    
T  51070490 aaagttatatatttaatataaaatacacaagttacaaaacaaacttaccattttaaatttcttaac 51070425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 53376603 - 53376558
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaa 189  Q
    ||||||||| || |||||||||  ||||||||||||||||||||||    
T  53376603 attattttaaggatttgtctaagatgtgcaatattgcacatgttaa 53376558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 23051437 - 23051401
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  23051437 caaagttactactttaaatttcttatcatgtgcaaat 23051401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 23438278 - 23438314
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||||||| |||| |||||||||||||    
T  23438278 caaagttactattttaaaattctcaacatgtgcaaat 23438314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 32279190 - 32279230
Alignment:
Q  274 aatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  32279190 aatgcaaatttactattttaaactttttaacatgtgcaaat 32279230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 307
Target Start/End: Original strand, 36971398 - 36971426
Alignment:
Q  279 aaagttactattttaaatttcttaacatg 307  Q
    |||||||||||||||||||||||||||||    
T  36971398 aaagttactattttaaatttcttaacatg 36971426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 41488773 - 41488737
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |||||||||||||||||||||||||||    
T  41488773 caaatttacaattttaaatttcttaacatgtgcaaat 41488737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 42480112 - 42480000
Alignment:
Q  144 attattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaag 242  Q
    ||||||| | || |||||||| | | ||||||||||||||| |||| | |||||| ||||| ||  |||||||| ||| || ||||||||||  | ||||    
T  42480112 attatttaaaggttttgtctagcatatgcaatattgcacatcttaaagcaactaagagtagcaacattttattgaaaaacatcaattatttattaaaaag 42480013  T
Q  243 ttatacatttaat 255  Q
    ||||| |||||||    
T  42480012 ttatatatttaat 42480000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 49228765 - 49228813
Alignment:
Q  266 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||  ||||||||||| |||||| ||||||||| ||||||||    
T  49228765 caagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaat 49228813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 1502899 - 1502739
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattta 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||| |||||    
T  1502899 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaacaacaattatttaacaaaaagttatatattta 1502800  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1502799 atacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaat 1502739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 153 - 314
Target Start/End: Complemental strand, 23576594 - 23576433
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  23576594 tgggtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattgaaaccaacaattatttaacaaaaagttatatattt 23576495  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23576494 aatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaat 23576433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 156 - 303
Target Start/End: Original strand, 3121119 - 3121266
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaat 255  Q
    ||||||||||  ||||||||||| || |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  3121119 gtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagttatatatttaat 3121218  T
Q  256 acaaaatattcaagttccaatgcaaagttactattttaaatttcttaa 303  Q
    ||||||| || |||||| |||| |||||||||||||||||||||||||    
T  3121219 acaaaatgtttaagttctaatgtaaagttactattttaaatttcttaa 3121266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 23591696 - 23591857
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa-tcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| |||||||||||||| | |||||||| ||||||||||||||||||| |||| |||||||||  | ||||||||| ||||    
T  23591696 gggtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatattt 23591795  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||| | |||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  23591796 aatacaaaatgtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaat 23591857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 172 - 314
Target Start/End: Original strand, 36490795 - 36490938
Alignment:
Q  172 caatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagt 270  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||  |||||||||||||  | ||||||||| ||| |||||||||| | |||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagt 36490894  T
Q  271 tccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  36490895 tccaatgcaaagttactattttaaacttcttaacatgtgcaaat 36490938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 314
Target Start/End: Original strand, 44918024 - 44918183
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |  | |||| || | |||||    
T  44918024 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgatta-aaagctacatattta 44918122  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||| |||| |   |||||||||   |||||||||| |||||||||||||||||||| ||||    
T  44918123 atataaaaaacataagttccaaattaaagttactactttaaatttcttaacatgtgtaaat 44918183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 313748 - 313908
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | |||| || | ||||    
T  313748 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgatta-aaagctacatattt 313846  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  313847 aatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaat 313908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 39150506 - 39150346
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | ||||    
T  39150506 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatattt 39150408  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||| ||||||  ||||||||||| |||||| |||||| |||||||||||    
T  39150407 aatataaaaaacacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaat 39150346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 6754474 - 6754630
Alignment:
Q  158 ttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatac 257  Q
    ||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | | ||||||     
T  6754474 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataattaatat 6754573  T
Q  258 aaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||   ||||||||||  ||||||||||| |||||| |||||| |||||||||||    
T  6754574 aaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaat 6754630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 155 - 314
Target Start/End: Complemental strand, 47355556 - 47355397
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||| |||||  |||||||||||||||||||||| | |||||||||||  || |||||||||||| ||||||||| ||| || |||| ||||   ||||    
T  47355556 ggtttatctaaaatgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaacaacaattacttatcaaaaaggtatatcattaa 47355457  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || |||||   ||||||||||| |||| ||| ||||||||||||||||||||||| ||||    
T  47355456 tataaaatgaacaagttccaatacaaatttattattttaaatttcttaacatgtgtaaat 47355397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 17919452 - 17919612
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||  | ||||||| | ||||    
T  17919452 gggtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatta-aaagttacatattt 17919550  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||| ||||||  ||||||||||| |||||| ||||||  ||||||||||    
T  17919551 aatataaaaaacacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaat 17919612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 41624825 - 41624988
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacat 250  Q
    |||||| ||||||||| |||||||||||||||||||||| | |||||||| |||||| |||||||||||| ||||||||| |||  | |||  || | |     
T  41624825 tatgggattgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctacataa 41624924  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||||   ||||||||||  ||||||||||| |||||| |||||| ||| |||||||    
T  41624925 ttaatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaat 41624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 314
Target Start/End: Original strand, 22167322 - 22167494
Alignment:
Q  143 tattattttatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta-acagaa 240  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||   |||||| |||||||| ||||| ||| ||| |||||||||||||  || ||    
T  22167322 tattatattatgggtttgtctaccatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaa 22167421  T
Q  241 agttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | || || ||||||||  |||| | ||||||||||| ||||||| |||||||||| |||||| |||||||||||    
T  22167422 aatt-tatatttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaat 22167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 51382370 - 51382450
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattt 233  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||||    
T  51382370 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattt 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 30171876 - 30172038
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | |||    
T  30171876 tgggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatt 30171975  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  ||||   ||||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  30171976 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 30172038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 314
Target Start/End: Original strand, 30187417 - 30187579
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatt 251  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | |||    
T  30187417 tgggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatt 30187516  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  ||||   ||||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  30187517 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaat 30187579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 314
Target Start/End: Complemental strand, 7520163 - 7520016
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacatttaatacaaaatattc 266  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||  |||  || | |||||||  | || |||||| ||| |||||||||| | |    
T  7520163 tgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgttatatattaaatacaaaatgtac 7520064  T
Q  267 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    || || ||||||||||||  ||||||||| ||||||||||||| ||||    
T  7520063 aaatttcaatgcaaagttgttattttaaacttcttaacatgtgaaaat 7520016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 314
Target Start/End: Original strand, 25465171 - 25465317
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattga-aatcaacaattatttaacagaaagttatacatttaatacaaaatattc 266  Q
    |||||||||||||||||||||| || ||||||||||| || |||| ||||| || ||||||||||||| || ||||||| | ||||   |  ||||   |    
T  25465171 tgtgcaatattgcacatgttaaagtcactaaaagtagcaactttt-attgagaaacaacaattatttatcaaaaagttaaatattttccattaaatgcac 25465269  T
Q  267 aagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||||    
T  25465270 aagttccaatgcaaatttactattttgaacttcttaacatgtgcaaat 25465317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 299
Target Start/End: Complemental strand, 34050463 - 34050317
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||| | ||| |||||||  || || |||||| ||| ||||||||||||| || ||| ||||| |||     
T  34050463 gggtttgtctaacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaaaattatatatta 34050364  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttc 299  Q
    |||| ||||| |  ||||| |||| |||| ||| |||||||||||||    
T  34050363 aatataaaatgtaaaagtttcaatacaaaattattattttaaatttc 34050317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 30363175 - 30363014
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacattt 252  Q
    |||||||| ||||||||  ||  |||||||||||||||  ||||||| |||||| |||||||||||| | |||||||| |||  | |||  || | ||||    
T  30363175 gggtttgtttaacctgttaaaacttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatattt 30363076  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||||   ||||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  30363075 aatataaaatgcacaagttccaagtcaaagttactattttaaatttgttatcatgtgcaaat 30363014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 8062206 - 8062282
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatt 232  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattatt 8062282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 151 - 314
Target Start/End: Original strand, 35512720 - 35512884
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| ||||||| |||||| |||||||   |||||| |||||||| ||||| ||| ||| ||||| |||| ||    |||||| || |    
T  35512720 tatgggtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagttttata 35512819  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  |||| | |||||||||||  ||| || |||||||||| ||||||||||||||||||    
T  35512820 tttaatattaaatgtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaat 35512884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 6180182 - 6180345
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacat 250  Q
    ||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || ||||   | |||||||||    |||||| || ||    
T  6180182 atgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagttttatat 6180281  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||  |||| | |||||||||||  ||| || |||||||||| ||||||||||||||||||    
T  6180282 ttaatattaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaat 6180345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 12019672 - 12019739
Alignment:
Q  88 tcatatcctttaaatgtacattttcatttggag----ataaatttataaaataaaatattattatttt 151  Q
    ||||||||||| |||||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  12019672 tcatatccttttaatgtacattttcatttggagtgagataaatttataaaataaaatattattatttt 12019739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 34801966 - 34802032
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    ||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||||||    
T  34801966 gggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaa 34802032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 6307501 - 6307661
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||||||||  | || | |||||| |||| |||||||||||||  | ||| ||||| | ||    
T  6307501 gggtttgtctaacatgtgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatata-tt 6307599  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||  ||||||||||  ||||  || || |||||| ||||||||||||||||||    
T  6307600 aatagaaaatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaat 6307661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 13321874 - 13322035
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| ||||||| |||| |||||||||   |||||| |||||||| ||||| ||| ||| ||||||||||||     |||||| || ||||    
T  13321874 gggtttgtctaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttttatattt 13321973  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | ||| ||||||| |||| || |||||||||| |||||||||| |||||||    
T  13321974 aatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaat 13322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 29635926 - 29635767
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt-attgaaatcaacaattatttaacagaaagttatacatttaa 254  Q
    ||||| ||||| |||||||||||| | || |||| |  ||||||||| |||| ||||| ||| |||   | |||||||||  | |||||||||  || ||    
T  29635926 gtttgactaacatgtgcaatattgtatatattaaagagactaaaagtggtaaattttttattaaaaatgataattatttattaaaaagttatatgttaaa 29635827  T
Q  255 tacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||| |||||| ||||  |||||||||||||||||||| ||||||||| |||||    
T  29635826 tacaaaatatacaagtttcaatataaagttactattttaaattttttaacatgtacaaat 29635767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 151 - 301
Target Start/End: Complemental strand, 39627754 - 39627603
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||| ||| || |||| |||| ||| ||||||| | |||    ||||||| | |    
T  39627754 tatgggtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacata 39627655  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttctt 301  Q
    ||||||| |||||   |||||| |||| |||| |||||||||| || |||||    
T  39627654 tttaatataaaatgcacaagttacaatacaaatttactattttgaacttctt 39627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 314
Target Start/End: Original strand, 23808431 - 23808593
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatt 251  Q
    ||||||||||||||| ||| ||| ||||||||||||||  ||||| | |||||||| ||||  | |||| ||||| |||||||    ||||||  | |||    
T  23808431 atgggtttgtctaacatgtacaacattgcacatgttaaaataactgatagtagtaatttttcttggaaaacaacatttatttattcaaaagtttgatatt 23808530  T
Q  252 taatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||  |||| |  |||||||||| |||| || |||||| ||| ||||||||||||||||||    
T  23808531 taatattaaatgtataagttccaatacaaaatttctatttaaaacttcttaacatgtgcaaat 23808593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 38812738 - 38812899
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    |||||||| |||| ||||||| |||| |||||||||   |||||| |||||||| ||||| || |||| |||||||||||||    |||||| || ||||    
T  38812738 gggtttgtttaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagttttatattt 38812837  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  |||| | |||||| ||||  ||| || ||||||| || ||||||||||||||||||    
T  38812838 aatattaaatgtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaat 38812899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 314
Target Start/End: Complemental strand, 7825041 - 7824877
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| | |||||||||||    |||||| || |    
T  7825041 tatgggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagttttata 7824942  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  |||| | ||| || || | |||| ||  ||||||||| || |||||||||||||||    
T  7824941 tttaatattaaatgtacaaatttcattacaaaatttttattttaaactttttaacatgtgcaaat 7824877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 32716339 - 32716263
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatt 232  Q
    |||||||||| |||||||||||||||||||||||||||||||| | ||||| ||||  |||||| | ||||||||||    
T  32716339 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattatt 32716263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 19277832 - 19277934
Alignment:
Q  200 agtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaattt 298  Q
    |||||||||||||||||||||  |||||||||||||  | |||||||       |||||||||||| || ||||||||||||| ||||||||||||| ||    
T  19277832 agtagtaagtttttattgaaaaacaacaattatttattaaaaagtta-------aatacaaaatatacacgttccaatgcaaaattactattttaaactt 19277924  T
Q  299 cttaacatgt 308  Q
    || |||||||    
T  19277925 ctgaacatgt 19277934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 22331620 - 22331702
Alignment:
Q  153 tgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattattta 234  Q
    |||||||||||||| ||||||| ||||||||||||||  || |||| |||||||| ||||| ||| ||| |||||||||||||    
T  22331620 tgggtttgtctaacatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattattta 22331702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 43317490 - 43317568
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    ||||||| ||| |||||||||||| ||||||||| | ||||||||||||||| | ||| |||||| ||||||| |||||    
T  43317490 gtttgtcaaacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaacaacaatcattta 43317568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 1366141 - 1366206
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||| ||||| ||||||| |||| ||||||||||||||||||| ||||||| ||||    
T  1366141 atttaatactaaatgttcaaattccaatacaaaattactattttaaatttctttacatgtgtaaat 1366206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 311
Target Start/End: Complemental strand, 21854295 - 21854139
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattta 253  Q
    |||||||||||| ||||||| ||||  ||||||||| || ||||||||||||| |||| |||| ||| ||||| |||||||    |||| ||   |||||    
T  21854295 ggtttgtctaacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctattta 21854197  T
Q  254 atacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgca 311  Q
    ||| ||||| | ||||||||||  ||||||||| | |||||| || ||||||||||||    
T  21854196 atataaaatgtacaagttccaagtcaaagttaccactttaaactttttaacatgtgca 21854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 314
Target Start/End: Complemental strand, 23378682 - 23378521
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattatttaacagaaagtta---tacattt 252  Q
    |||||| |||| ||||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||||||||||   | |||||||   || ||||    
T  23378682 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacaattatttgttaaaaagttacactatattt 23378583  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||| | ||| |  |||| |||| |||||||||| || |||||||||||| |||||    
T  23378582 aatataaaatgtacaaatagcaattcaaatttactattttgaaattcttaacatgttcaaat 23378521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 52337834 - 52337924
Alignment:
Q  223 aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaa 313  Q
    ||||||||||||  | ||| ||||| |||||||| ||||||   ||||| ||||||| | ||||||||||||| |||||||||||| ||||    
T  52337834 aacaattatttattaaaaatttatatatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaacatgttcaaa 52337924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 314
Target Start/End: Original strand, 9516651 - 9516740
Alignment:
Q  225 caattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||  | ||||||||| |||||||| ||||||  ||||||  ||   ||| |||| |||||||||||||||||||||||||||    
T  9516651 caattatttattaaaaagttatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttcttaacatgtgcaaat 9516740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 38539086 - 38539135
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtag 204  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||| ||||    
T  38539086 ggtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtag 38539135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 38561304 - 38561353
Alignment:
Q  155 ggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtag 204  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||| ||||    
T  38561304 ggtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtag 38561353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 3168248 - 3168168
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatcaacaattattta 234  Q
    ||||||||||||| ||||||| ||||||||||||||   |||||| ||| | || ||||| | |||| |||||||||||||    
T  3168248 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtgggaattttttttggaaaacaacaattattta 3168168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 36578332 - 36578392
Alignment:
Q  156 gtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt 216  Q
    |||| |||||| |||||||||||||||||||||| | || |||||||||||| || |||||    
T  36578332 gtttatctaacatgtgcaatattgcacatgttaaagcaattaaaagtagtaatttcttatt 36578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 399602 - 399543
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagttttt 213  Q
    ||||||||||||| || ||||||||||||||||||  | ||||||| ||||||| |||||    
T  399602 gggtttgtctaacatgcgcaatattgcacatgttatagcaactaaacgtagtaatttttt 399543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 51467547 - 51467606
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgt 308  Q
    ||||||||  |||| | ||||||||||| |||| || |||||||||||||||||||||||    
T  51467547 atttaatattaaatgtacaagttccaatacaaacttcctattttaaatttcttaacatgt 51467606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 306396 - 306438
Alignment:
Q  109 tttcatttggagataaatttataaaataaaatattattatttt 151  Q
    ||||||||||||||| || |||||||||||||| |||||||||    
T  306396 tttcatttggagatagatatataaaataaaataatattatttt 306438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 32201737 - 32201783
Alignment:
Q  268 agttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||||| ||| ||||||||| ||||||| ||||||||||    
T  32201737 agttccaatgcaaatttattattttaaacttcttaatatgtgcaaat 32201783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 6570069 - 6570004
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||| |||| |  ||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  6570069 atttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaat 6570004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 13241880 - 13241916
Alignment:
Q  278 caaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |||||||||||||||||||||||||||    
T  13241880 caaacttaccattttaaatttcttaacatgtgcaaat 13241916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 28016291 - 28016339
Alignment:
Q  266 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  28016291 caagttccaatacaaaatttatattttaaaattcttaacatgtgcaaat 28016339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 40799424 - 40799372
Alignment:
Q  168 tgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 220  Q
    |||||||||||||||||||||  | |||||||||||  || ||||||||||||    
T  40799424 tgtgcaatattgcacatgttagagcaactaaaagtatgaactttttattgaaa 40799372  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 314
Target Start/End: Complemental strand, 51920614 - 51920450
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttataca 249  Q
    |||| ||||||||||  |||| || |||  |||||||||   || ||| |||||||| ||||| ||||||  |||||||||||||    |||||| || |    
T  51920614 tatgagtttgtctaaagtgtgtaacattatacatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttattcaaaagttttata 51920515  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  |||||| ||| ||  |||  ||| || ||||||||||||| |||||||||||||||    
T  51920514 tttaatattaaatatacaaattttaatataaaatttctattttaaatttattaacatgtgcaaat 51920450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 52958 - 52798
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | ||||    
T  52958 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatattt 52860  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  52859 aatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 52798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 145676 - 145836
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||| |  | ||||||| | ||||    
T  145676 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatta-aaagttacatattt 145774  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |  ||||||||||  ||||||||||| |||||| ||||||||||||||||||    
T  145775 aatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaat 145836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 94200 - 94037
Alignment:
Q  152 atgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacat 250  Q
    |||| |||||||||| | ||||| ||||||||||||||   |||||||||||||||||||||||||||| | || |||||||||  | |||  |||| ||    
T  94200 atggatttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatat 94101  T
Q  251 ttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||||||| |  ||||||||||| ||||||| ||||| ||| |||||||||| |||||||    
T  94100 ttaatacaaaatgtataagttccaatgtaaagttagtatttaaaacttcttaacatatgcaaat 94037  T

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Target: scaffold0011 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 13084 - 13244
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||| ||| |||||||| || |  | |||| || | ||||    
T  13084 gggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgatta-aaagctacatattt 13182  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| |||| |  ||| ||||||   ||||||||||||||||| ||||||||||||||||||    
T  13183 aatataaaaaacacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaat 13244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 314
Target Start/End: Complemental strand, 37297 - 37133
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttataca 249  Q
    |||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||||||  ||| | |||||||  | |||| || | |    
T  37297 tatgggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacata 37198  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||||  ||||   ||||||||||  ||||||||  | |||||| ||||||||||||||||||    
T  37197 tttaatatgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaat 37133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 5692 - 5769
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaa-gtttttattg-aaatcaacaattatt 232  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||| |||||||||||    
T  5692 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattatt 5769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 8550 - 8433
Alignment:
Q  197 aaaagtagtaagtttttattgaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactattttaaat 296  Q
    ||||||| ||| |||||||||||| |||||||||||||  | |||  || | |||||||| |||||   ||||||| ||  ||||||||||| |||||||    
T  8550 aaaagtattaattttttattgaaaacaacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaat 8451  T
Q  297 ttcttaacatgtgcaaat 314  Q
    |||||||||| |||||||    
T  8450 ttcttaacatatgcaaat 8433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 16714 - 16554
Alignment:
Q  154 gggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttatacattt 252  Q
    ||||||||||||| | ||||| |||||| ||||||| |||||||||||  | || | |||||| |||| |||||||||||||  | ||| ||||| | ||    
T  16714 gggtttgtctaacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatata-tt 16616  T
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||  ||||||||||  ||||  || || |||||| ||||||||||||||||||    
T  16615 aatagaaaatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaat 16554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 17946 - 17807
Alignment:
Q  177 ttgcacatgttaaggtaa-ctaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttcca 274  Q
    ||||||||||||| | || |||||||||  ||| |||||||||||   ||||||||||||  | ||| |||||  ||||||||||||| | |||||||||    
T  17946 ttgcacatgttaaagcaaactaaaagtaacaagcttttattgaaaaataacaattatttattaaaaatttatatctttaatacaaaatgtacaagttcca 17847  T
Q  275 atgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||  |||||||||||||| || ||  ||||||||||||||    
T  17846 atataaagttactatttttaacttaataacatgtgcaaat 17807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 18153 - 18015
Alignment:
Q  177 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaat-caacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaa 275  Q
    |||||| |||||| | || |||||||||||| | || ||| |||  |||||||||||||  ||||||||||| |||||||| ||||| | ||| ||||||    
T  18153 ttgcacgtgttaaaggaattaaaagtagtaactcttaattaaaaaacaacaattatttattagaaagttatatatttaatataaaatgtacaaattccaa 18054  T
Q  276 tgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    | ||||  ||||||||| ||  | |||||| ||||||||    
T  18053 tacaaacatactattttgaacattttaacacgtgcaaat 18015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 24611 - 24546
Alignment:
Q  249 atttaatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||||||| |||| ||||| ||||||| |||| ||||||||||||||||||| ||||||| ||||    
T  24611 atttaatactaaatgttcaaattccaatacaaaattactattttaaatttctttacatgtgtaaat 24546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 3572 - 3432
Alignment:
Q  175 tattgcacatgttaaggtaactaaaagtagtaagttttt-att-gaaatcaacaattatttaacagaaagttatacatttaatacaaaatattcaagttc 272  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||  ||| ||||||||||| |  | ||||||| | |||||||| |||| |   ||||||    
T  3572 tattgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgatta-aaagttacatatttaatataaaaaacataagttc 3474  T
Q  273 caatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    ||||  ||||| |||| |||||| ||||||| ||||||||||    
T  3473 caatttaaagtaactactttaaacttcttaatatgtgcaaat 3432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 43479 - 43568
Alignment:
Q  171 gcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaatcaacaattatttaacagaaagttatacatttaatacaaaa 261  Q
    |||||||||||| ||||||||||| |||||||||||| |||| |||| ||||||||||||| ||||   ||||||||| |||||||| ||||    
T  43479 gcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaatta-ttaattaaaagttatatatttaatataaaa 43568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 193417 - 193376
Alignment:
Q  149 tttatgggtttgtctaacctgtgcaatattgcacatgttaag 190  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  193417 tttatgagtttgtctaacatgtgcaatattgcacatgttaag 193376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 13841 - 13696
Alignment:
Q  151 tatgggtttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttatt-gaaatcaacaattatttaacagaaagttataca 249  Q
    ||||||||| |||||| ||||||| ||||||||||||||   |||||| |||||||| ||||| || |||| ||| | |||||||    |||||| || |    
T  13841 tatgggtttttctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagttttata 13742  T
Q  250 tttaatacaaaatattcaagttccaatgcaaagttactattttaaa 295  Q
    |||||||   ||| | ||||||||||| |||| || ||||||||||    
T  13741 tttaatatttaatgtacaagttccaatacaaaatttctattttaaa 13696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 13630 - 13582
Alignment:
Q  266 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||||| ||||||||| |||||| |||||| ||||||||||||||||||    
T  13630 caagtttcaatgcaaacttactaatttaaacttcttaacatgtgcaaat 13582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 443 - 492
Alignment:
Q  157 tttgtctaacctgtgcaatattgcacatgttaaggtaactaaaagtagta 206  Q
    ||||| |||| ||||||||||||||||||||||   ||||||||||||||    
T  443 tttgtttaacatgtgcaatattgcacatgttaaatcaactaaaagtagta 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 44374 - 44313
Alignment:
Q  253 aatacaaaatattcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaat 314  Q
    |||| ||||||| |||||| ||||||||||||  ||||||||| || |||| ||||||||||    
T  44374 aataaaaaatatacaagtttcaatgcaaagttgttattttaaactttttaatatgtgcaaat 44313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 182079 - 182201
Alignment:
Q  191 gtaactaaaagtagtaagtttttattgaaatc-aacaattatttaacagaaagttatacatttaatacaaaatattcaagttccaatgcaaagttactat 289  Q
    ||||| ||||||||||| |||||||||||| | ||||||||||||  | ||||||| | |||||||| |||| |  |||||| |||  ||| | |||||     
T  182079 gtaaccaaaagtagtaattttttattgaaaacaaacaattatttatta-aaagttacatatttaatataaaaaacacaagtttcaaatcaacg-tactac 182176  T
Q  290 tttaaatttcttaacatgtgcaaat 314  Q
    |||||| |||||||||||| |||||    
T  182177 tttaaacttcttaacatgtacaaat 182201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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