View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12942_low_74 (Length: 246)

Name: NF12942_low_74
Description: NF12942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12942_low_74
NF12942_low_74
[»] chr1 (13 HSPs)
chr1 (25-246)||(47602988-47603210)
chr1 (25-246)||(37441312-37441534)
chr1 (28-246)||(36418896-36419115)
chr1 (27-244)||(35309406-35309622)
chr1 (77-246)||(24469943-24470113)
chr1 (148-246)||(32179774-32179872)
chr1 (176-246)||(7702779-7702849)
chr1 (186-245)||(46265071-46265130)
chr1 (186-239)||(15662903-15662956)
chr1 (186-245)||(7596347-7596406)
chr1 (186-245)||(23916764-23916823)
chr1 (186-245)||(42916241-42916300)
chr1 (176-226)||(44596472-44596522)
[»] chr4 (18 HSPs)
chr4 (25-246)||(53369480-53369702)
chr4 (27-246)||(49820778-49820996)
chr4 (25-246)||(12789678-12789900)
chr4 (25-246)||(44791369-44791582)
chr4 (25-246)||(45674636-45674849)
chr4 (113-246)||(53369752-53369886)
chr4 (101-246)||(19852846-19852992)
chr4 (97-246)||(48977440-48977590)
chr4 (49-246)||(50605841-50606022)
chr4 (25-116)||(19850521-19850612)
chr4 (163-246)||(21441512-21441595)
chr4 (58-133)||(49378093-49378168)
chr4 (186-246)||(9469731-9469791)
chr4 (197-245)||(48339226-48339274)
chr4 (186-245)||(50147045-50147104)
chr4 (189-246)||(43387225-43387282)
chr4 (189-246)||(52813558-52813615)
chr4 (186-246)||(36543735-36543795)
[»] chr2 (12 HSPs)
chr2 (25-246)||(41958935-41959157)
chr2 (25-246)||(36538448-36538670)
chr2 (25-246)||(34064506-34064719)
chr2 (49-246)||(33831252-33831441)
chr2 (25-246)||(26436167-26436368)
chr2 (25-133)||(27633532-27633640)
chr2 (192-246)||(33831455-33831509)
chr2 (145-246)||(27634578-27634685)
chr2 (186-245)||(34116300-34116359)
chr2 (186-245)||(39690124-39690183)
chr2 (25-75)||(20986456-20986506)
chr2 (197-245)||(11027873-11027921)
[»] chr6 (5 HSPs)
chr6 (25-246)||(8200434-8200656)
chr6 (25-246)||(10346513-10346735)
chr6 (186-245)||(9950887-9950946)
chr6 (186-245)||(10961923-10961982)
chr6 (25-127)||(7957434-7957536)
[»] chr5 (11 HSPs)
chr5 (25-246)||(18879986-18880206)
chr5 (25-246)||(27905889-27906112)
chr5 (25-232)||(22921842-22922050)
chr5 (25-229)||(29327825-29328037)
chr5 (186-245)||(20190711-20190770)
chr5 (186-246)||(31620822-31620882)
chr5 (25-127)||(3805058-3805160)
chr5 (196-245)||(20188937-20188986)
chr5 (186-246)||(3801490-3801550)
chr5 (186-246)||(15933114-15933174)
chr5 (186-246)||(32157063-32157123)
[»] scaffold0316 (1 HSPs)
scaffold0316 (25-246)||(19088-19310)
[»] chr3 (10 HSPs)
chr3 (25-246)||(41609679-41609902)
chr3 (25-246)||(23206433-23206656)
chr3 (27-246)||(32688972-32689183)
chr3 (25-133)||(39134152-39134260)
chr3 (186-246)||(39135308-39135368)
chr3 (186-246)||(44574480-44574540)
chr3 (186-245)||(45714679-45714738)
chr3 (192-246)||(33896790-33896844)
chr3 (189-246)||(28242540-28242597)
chr3 (189-246)||(52199346-52199403)
[»] chr7 (23 HSPs)
chr7 (25-246)||(48505914-48506136)
chr7 (28-244)||(388787-389003)
chr7 (25-246)||(3930842-3931064)
chr7 (25-246)||(15434040-15434262)
chr7 (49-246)||(37334099-37334297)
chr7 (25-246)||(36926796-36927018)
chr7 (25-246)||(5795062-5795275)
chr7 (61-244)||(26216106-26216289)
chr7 (25-246)||(42071889-42072102)
chr7 (25-246)||(43052678-43052891)
chr7 (113-246)||(28949884-28950019)
chr7 (153-246)||(5776256-5776349)
chr7 (25-133)||(7444186-7444294)
chr7 (176-246)||(665973-666043)
chr7 (25-131)||(45174986-45175092)
chr7 (186-246)||(45176204-45176264)
chr7 (25-78)||(28950018-28950071)
chr7 (186-246)||(20400955-20401015)
chr7 (186-239)||(27231672-27231725)
chr7 (189-246)||(44422028-44422085)
chr7 (186-245)||(3942135-3942194)
chr7 (190-245)||(5283008-5283063)
chr7 (145-181)||(45176126-45176162)
[»] chr8 (3 HSPs)
chr8 (47-246)||(453304-453497)
chr8 (49-246)||(11161397-11161586)
chr8 (186-245)||(34516092-34516151)
[»] scaffold0204 (1 HSPs)
scaffold0204 (197-245)||(26748-26796)
[»] scaffold0224 (1 HSPs)
scaffold0224 (186-245)||(7435-7494)


Alignment Details
Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 47603210 - 47602988
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  47603210 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcaaccaca 47603111  T
Q  125 tttgccacatttgaattaaatt-ttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  47603110 tttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaacta 47603011  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  47603010 tatgtagctcaagttcagctcat 47602988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 37441534 - 37441312
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  37441534 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcagccaca 37441435  T
Q  125 tttgccacatttgaattaaatt-ttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  37441434 tttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagacatctcattaacctaacgagtcgaacta 37441335  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  37441334 tatgtagctcaagttcagctcat 37441312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 36418896 - 36419115
Alignment:
Q  28 aacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacattt 127  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||    
T  36418896 aacaaaattcaattagctgtgaacaaaattcataatattattttacttttaaactccaactgctcttcccttcaagacaaaattgtattcagccacattt 36418995  T
Q  128 gccacatttgaattaaattt-tttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatat 226  Q
    |||||||||||||||||    |||||||||||| ||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  36418996 gccacatttgaattaaaaaaatttaaaaactaattcaaattgatttatatatataatcgataatcgagtcatctcatgaacctaacgagtcgaactatat 36419095  T
Q  227 gtagcttaagttcagctcat 246  Q
    |||||| |||||||||||||    
T  36419096 gtagctcaagttcagctcat 36419115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 35309406 - 35309622
Alignment:
Q  27 caacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatt 126  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||| ||||||| ||||| |||||||    
T  35309406 caacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaacttcaactgctcttccctttaagacaaaattgaattcagccacatt 35309505  T
Q  127 tgccacatttgaatt-aaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactata 225  Q
    ||||||||||||||| |||  ||||||||||||||||||||| |||||  |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  35309506 tgccacatttgaattaaaaaattttaaaaactaactcaaattgattta--tatataatcgataagcgagccatctcatgaacctaacgagtcgaactata 35309603  T
Q  226 tgtagcttaagttcagctc 244  Q
    ||||||| |||||||||||    
T  35309604 tgtagctcaagttcagctc 35309622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 77 - 246
Target Start/End: Complemental strand, 24470113 - 24469943
Alignment:
Q  77 taaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatttgccacatttgaattaaatttttt-aaaaactaactcaaatttatttatc 175  Q
    ||||||||||||||||||  |||||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||     
T  24470113 taaactccaactgctcttcccttcaagacaaaattgtattcagcgacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttata 24470014  T
Q  176 tatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24470013 tatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcat 24469943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 32179774 - 32179872
Alignment:
Q  148 tttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||||||||||||||||| |||||| |||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  32179774 tttaaaaactaactcaaattgatttatatatataatcgataattgagtcatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcat 32179872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 7702779 - 7702849
Alignment:
Q  176 tatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||  |||||||||| |||||||||||||||||||| ||| |||  ||||||||||||||||||||    
T  7702779 tatataatcaataatcgagctatctcatgaacctaacgagtagaattatgcgtagcttaagttcagctcat 7702849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 46265130 - 46265071
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| ||||||||||||| |||||||||| |||||| ||| | ||||||||||||    
T  46265130 ataatcgagtcatctcatgaaccaaacgagtcgacctatatatagttcaagttcagctca 46265071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 15662903 - 15662956
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttc 239  Q
    ||||||||| ||||||||||||| || ||||||||||| || ||||||||||||    
T  15662903 ataatcgagtcatctcatgaaccaaaagagtcgaactacatatagcttaagttc 15662956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 7596347 - 7596406
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| ||||||||||| | |||||||||||||| || ||| | ||||||||||||    
T  7596347 ataatcgagtcatctcatgaatcaaacgagtcgaactacatatagttcaagttcagctca 7596406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 23916764 - 23916823
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||||| |||||| |||||||||||||| || | ||| ||||||||||||    
T  23916764 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatattgctcaagttcagctca 23916823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 42916300 - 42916241
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| ||||||||||||| |||||||||| |||||| | | | ||||||||||||    
T  42916300 ataatcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctca 42916241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 44596472 - 44596522
Alignment:
Q  176 tatataattgataatcgagccatctcatgaacctaacgagtcgaactatat 226  Q
    ||||| |||||| ||||||||| |||||||||| | |||||||||||||||    
T  44596472 tatattattgattatcgagccagctcatgaaccaaccgagtcgaactatat 44596522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 6e-92; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 53369480 - 53369702
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||||    
T  53369480 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcctttcaagacaaaattgtattcaaccaca 53369579  T
Q  125 tttgccacatttgaattaa-attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  53369580 tttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaacta 53369679  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  53369680 tatgtagctcaagttcagctcat 53369702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 49820778 - 49820996
Alignment:
Q  27 caacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatt 126  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||| |||||||    
T  49820778 caacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaacttcaactgctcttcccttcaagacaaaattgtattcagccacatt 49820877  T
Q  127 tgccacatttgaattaaa-ttttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactata 225  Q
    || ||||||||||||||| ||||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49820878 tgtcacatttgaattaaatttttttaaaaactaactcaaattgattta--tatataatcgataatcgagccatctcatgaacctaacgagtcgaactata 49820975  T
Q  226 tgtagcttaagttcagctcat 246  Q
    ||||||| |||||||||||||    
T  49820976 tgtagctcaagttcagctcat 49820996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 12789900 - 12789678
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  12789900 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctctttccttcaagacaaaattgtattcagccaca 12789801  T
Q  125 tttgccacatttgaattaaatttttta-aaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||| |||||| ||||||||  ||||||||||||||||||   |||||| ||| ||||||    
T  12789800 tttgccacatttgaaataatttttttaaaaaactaactcaaattgatttatatatataatcaataatcgagccatctcattttcctaactagttgaacta 12789701  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  12789700 tatgtagctcaagttcagctcat 12789678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 44791582 - 44791369
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||          
T  44791582 tccaacaaaatttaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattca------ 44791489  T
Q  125 tttgccacatttgaattaaatttttt-aaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
       |||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  44791488 ---gccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagtcatctcatgaacctaacgagtcgaacta 44791392  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| || ||||||||||    
T  44791391 tatgtagctcaaattcagctcat 44791369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 45674636 - 45674849
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  45674636 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaattgctcttcccttcaagacaaaattgtattcaaccaca 45674735  T
Q  125 tttgccacatttgaattaaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactat 224  Q
    || |    |||  ||||   ||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45674736 ttaga---att--aatt---ttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactat 45674827  T
Q  225 atgtagcttaagttcagctcat 246  Q
    |||||||| ||||||| |||||    
T  45674828 atgtagctcaagttcaactcat 45674849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 113 - 246
Target Start/End: Original strand, 53369752 - 53369886
Alignment:
Q  113 tattcaaccacatttgccacatttgaattaaa-ttttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaa 211  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  53369752 tattcaaccacatttgccacatttgaattaaaattttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaa 53369851  T
Q  212 cgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||||||||||||||| |||||||||||||    
T  53369852 cgagtcgaactatatgtagctcaagttcagctcat 53369886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 101 - 246
Target Start/End: Original strand, 19852846 - 19852992
Alignment:
Q  101 aagaaaaaattgtattcaaccacatttgccacatttgaattaaatt-ttttaaaaactaactcaaatttatttatctatataattgataatcgagccatc 199  Q
    |||| ||||||||||| | |||||||||||||||||||||||||   ||||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  19852846 aagagaaaattgtattaagccacatttgccacatttgaattaaaaaattttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 19852945  T
Q  200 tcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  19852946 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcat 19852992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 97 - 246
Target Start/End: Original strand, 48977440 - 48977590
Alignment:
Q  97 cttcaagaaaaaattgtattcaaccacatttgccacatttgaattaaatttt-ttaaaaactaactcaaatttatttatctatataattgataatcgagc 195  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||     ||||||||||||||||||| |||||| |||||||| |||||||||||    
T  48977440 cttcaagacaaaattgtattcggccacatttgccacatttgaattaaaaaaaattaaaaactaactcaaattgatttatatatataatcgataatcgagc 48977539  T
Q  196 catctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
     |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  48977540 tatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcat 48977590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 49 - 246
Target Start/End: Original strand, 50605841 - 50606022
Alignment:
Q  49 aacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatttgccacatttgaattaaatttt 148  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||   ||||||| |||||||||||||         ||||||||||||||           
T  50605841 aacaaaattcacaatattcttttacttttaaattccaattgctcttccattcaagacaaaattgtattca---------gccacatttgaatt------- 50605924  T
Q  149 ttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||||||||||||| |||||| ||||||||  |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  50605925 ttaaaaactaactcaaattgatttatatatataatcaataatcgagccatctcataaacctaacgagtcgaactatatgtagctcaagttcagctcat 50606022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 19850521 - 19850612
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtatt 116  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  19850521 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagagaaaattgtatt 19850612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 21441512 - 21441595
Alignment:
Q  163 aaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21441512 aaattgatttatatatataatcaataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcat 21441595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 49378168 - 49378093
Alignment:
Q  58 cataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatttgccaca 133  Q
    |||||||||||| |||||  ||||||||| |||||||  ||| |||| ||||||||||||| ||||||||||||||    
T  49378168 cataatattcttctacttccaaactccaattgctcttcccttaaagacaaaattgtattcagccacatttgccaca 49378093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 9469731 - 9469791
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| ||||||||||||||||||| |||||| || | ||| | |||||||||||||    
T  9469731 ataatcgagtcatctcatgaacctaacgaatcgaaccatctatagttcaagttcagctcat 9469791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 48339274 - 48339226
Alignment:
Q  197 atctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||| |||||| |||||||||||||| || ||||||||||||||||||    
T  48339274 atctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctca 48339226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 50147104 - 50147045
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||||| |||||| |||||| ||||||| || || |||||||||||||||    
T  50147104 ataatcgagtcatctcgtgaaccaaacgagccgaactacatataacttaagttcagctca 50147045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 43387225 - 43387282
Alignment:
Q  189 atcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||| | |||||||||||||||  || | |||||||||||||    
T  43387225 atcgagccaactcatgaaccaaccgagtcgaactatataaagttcaagttcagctcat 43387282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 52813558 - 52813615
Alignment:
Q  189 atcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||| | ||| |||||||||||  |||| |||||||||||||    
T  52813558 atcgagccaactcatgaaccaaccgaatcgaactatataaagctcaagttcagctcat 52813615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 36543735 - 36543795
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| ||||||||||||||||| | |||||| || | ||| | |||||||||||||    
T  36543735 ataatcgagtcatctcatgaacctaacaaatcgaaccatctatagttcaagttcagctcat 36543795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 41958935 - 41959157
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  41958935 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttaattttaaactccaactgctcttcccttcaagacaaaattgtattcagccaca 41959034  T
Q  125 tttgccacatttgaattaaa-ttttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  41959035 tttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcattaacctaacgagtcgaacta 41959134  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||||| |||||||||||    
T  41959135 tatgtagcttatgttcagctcat 41959157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 36538448 - 36538670
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  36538448 tccaacaaaattcaattaattgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcagccaca 36538547  T
Q  125 tttgccacatttgaattaa-attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||| ||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  36538548 tttgtcacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagtcatctcatgaacctaacgagtcgaacta 36538647  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| ||||| |||||||    
T  36538648 tatgtagctcaagtttagctcat 36538670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 34064506 - 34064719
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||          
T  34064506 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattca------ 34064599  T
Q  125 tttgccacatttgaattaaatttt-ttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
       |||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  34064600 ---gccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcgataatcgaaccatctcatgaacctaacgagtcgaacta 34064696  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  34064697 tatgtagctcaagttcagctcat 34064719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 49 - 246
Target Start/End: Original strand, 33831252 - 33831441
Alignment:
Q  49 aacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatttgccacatttgaattaaatttt 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||||         |||||||||||||||||||||    
T  33831252 aacaaaatttataatattcttttacttttaaactccaactgctcttccattcaagacaaaattgtattca---------gccacatttgaattaaatttt 33831342  T
Q  149 -ttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
     ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33831343 tttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcat 33831441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 26436167 - 26436368
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||          
T  26436167 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttatactccaactgctcttcccttcaagacaaaattgtattca------ 26436260  T
Q  125 tttgccacatttgaattaaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactat 224  Q
       |||||||||||||||| |||||           | ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26436261 ---gccacatttgaattaatttttt-----------ttaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactat 26436346  T
Q  225 atgtagcttaagttcagctcat 246  Q
    |||||||| |||||||||||||    
T  26436347 atgtagctcaagttcagctcat 26436368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 27633532 - 27633640
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| || | ||  |||||||| ||||||||||||| |||||    
T  27633532 tccaacaaaattcaattagctgtgaacaaaattcataatattattttacttctaaactccaattgttattcccttcaagacaaaattgtattcagccaca 27633631  T
Q  125 tttgccaca 133  Q
    |||||||||    
T  27633632 tttgccaca 27633640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 33831455 - 33831509
Alignment:
Q  192 gagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33831455 gagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcat 33831509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 27634578 - 27634685
Alignment:
Q  145 ttttttaaaaactaactcaaatttatttatctatata------attgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagtt 238  Q
    |||||| |||||||||||||||| |||||| ||||||      ||  ||||| ||| |||||||||||||||||||||| |||||||||||||| |||||    
T  27634578 tttttttaaaactaactcaaattgatttatatatatatatataatcaataatggagtcatctcatgaacctaacgagtcaaactatatgtagctcaagtt 27634677  T
Q  239 cagctcat 246  Q
    ||||||||    
T  27634678 cagctcat 27634685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 34116359 - 34116300
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||| |||||||| |||||||||||||| || ||||| ||||||||||||    
T  34116359 ataatcgagtcatcacatgaaccaaacgagtcgaactacatatagctcaagttcagctca 34116300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 39690124 - 39690183
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| ||||||||||||| |||||||||||||| || ||||| ||||||| ||||    
T  39690124 ataatcgagtcatctcatgaaccaaacgagtcgaactacatatagctcaagttcaactca 39690183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 20986456 - 20986506
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttactt 75  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||| |||||    
T  20986456 tccaacaaaattcaattagccgagaacataattcataatattcttctactt 20986506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 11027873 - 11027921
Alignment:
Q  197 atctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||| |||||| |||||||||||||| || ||||| ||||||||||||    
T  11027873 atctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctca 11027921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 8200434 - 8200656
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    ||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  8200434 tccaacaaagttcaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcaaccaca 8200533  T
Q  125 tttgccacatttgaattaa-attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||||||||||||||||||  ||||||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  8200534 tttgccacatttgaattaattttttttataaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaacta 8200633  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| ||||||| |||||    
T  8200634 tatgtagctcaagttcaactcat 8200656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 10346513 - 10346735
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  10346513 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcagccaca 10346612  T
Q  125 tttgccacatttgaatt-aaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    ||||||||||||||||| |||  ||||||||| ||||||||||| |||||| ||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  10346613 tttgccacatttgaattaaaaaattttaaaaaataactcaaattgatttatatatataatcaataatcgagtcatctcatgaacttaacgagtcgaacta 10346712  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    |||||| || |||||||||||||    
T  10346713 tatgtaactcaagttcagctcat 10346735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 9950946 - 9950887
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||||| |||||| ||||||| |||||| || ||||| ||||||||||||    
T  9950946 ataatcgagtcatctcgtgaaccaaacgagttgaactacatatagctcaagttcagctca 9950887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 10961982 - 10961923
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||||| |||||| |||||||||||||| || ||| | ||||||||||||    
T  10961982 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctca 10961923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 7957434 - 7957536
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||| | ||||||  | ||||| ||| |||||||||||| |||||  ||||||||| ||||||  |||| ||||  |||||||||||| | |||    
T  7957434 tccaacaaaactcaattagttgagaacagaatgcataatattcttctacttccaaactccaattgctctcctctttaagactaaattgtattcagctaca 7957533  T
Q  125 ttt 127  Q
    |||    
T  7957534 ttt 7957536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 18879986 - 18880206
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  18879986 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcaaccaca 18880085  T
Q  125 tttgccacatttgaattaaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactat 224  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||    
T  18880086 tttgccacatttgaattaaattttttaaaaact-actcaaattgatttatatatataatcaataatcgagccatctcatgtacctaacgagttgaactat 18880184  T
Q  225 atgtagcttaagttcagctcat 246  Q
    |||||||| |||||||||||||    
T  18880185 atgtagctcaagttcagctcat 18880206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 27905889 - 27906112
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  27905889 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgctcttctcttcaagacaaaattgtattcagccaca 27905988  T
Q  125 tttgccacatttgaatta--aattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaact 222  Q
    ||||||||||||||||||    ||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||| |||||| |||||||||    
T  27905989 tttgccacatttgaattattttttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatctcatgagcctaacaagtcgaact 27906088  T
Q  223 atatgtagcttaagttcagctcat 246  Q
    |||||||||| |||||||||||||    
T  27906089 atatgtagctcaagttcagctcat 27906112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 25 - 232
Target Start/End: Original strand, 22921842 - 22922050
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||| |||||    
T  22921842 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaatcgtattcagccaca 22921941  T
Q  125 tttgccacatttgaattaa-attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||| ||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||||| |||||    
T  22921942 tttgtcacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatctcatgaacctaacgagtctaacta 22922041  T
Q  224 tatgtagct 232  Q
    |||||||||    
T  22922042 tatgtagct 22922050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 29327825 - 29328037
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||| ||||    
T  29327825 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaactccaattgctcttcccttcaagacaaaattgtattcaatcaca 29327924  T
Q  125 tttgccacatttgaattaaa--ttttttaaaaactaactcaaatttatttatctatata-----att-gataatcgagccatctcatgaacctaacgagt 216  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||     ||| |||||||||| |||||||||||||||||||||    
T  29327925 tttgccacatttgaattaaattttttttaaaaactaactcaaattgatttatatatatatatatattcgataatcgagtcatctcatgaacctaacgagt 29328024  T
Q  217 cgaactatatgta 229  Q
    |||||||||||||    
T  29328025 cgaactatatgta 29328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 20190770 - 20190711
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| ||||||||||||| ||||| |||||||| || ||||| ||||||||||||    
T  20190770 ataatcgagtcatctcatgaaccaaacgattcgaactacatatagctcaagttcagctca 20190711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 31620822 - 31620882
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||||||  |||| |||| ||||||||||| |||||||| || |||||||||||||    
T  31620822 ataatcgagccaagtcattaaccaaacgagtcgaattatatgtaactcaagttcagctcat 31620882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 3805160 - 3805058
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||| | |||||| ||  |||| ||| ||||||||| || |||||  ||||||||| ||||||   ||| |||| ||||||||||||| |||||    
T  3805160 tccaacaaaactcaattagtcgataacagaatgcataatatttttctacttccaaactccaattgctctccccttaaagacaaaattgtattcagccaca 3805061  T
Q  125 ttt 127  Q
    |||    
T  3805060 ttt 3805058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 20188937 - 20188986
Alignment:
Q  196 catctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    |||||| |||||| |||||||||||||| || ||||| ||||||||||||    
T  20188937 catctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctca 20188986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 3801550 - 3801490
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| ||||||||||||||||||| |||||| || | ||| | ||||||| |||||    
T  3801550 ataatcgagtcatctcatgaacctaacgaatcgaaccatttatagttcaagttcaactcat 3801490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 15933114 - 15933174
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||||||| | |||||||||| |||||||||||| || | ||||| |||||| ||||||    
T  15933114 ataatcgagctaactcatgaaccaaacgagtcgaaccatctatagctcaagttcggctcat 15933174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 32157123 - 32157063
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||| |||||| |||||| || | ||| | |||||||||||||    
T  32157123 ataatcgagtcatctcatgaacttaacgaatcgaaccatctatagttcaagttcagctcat 32157063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 19088 - 19310
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  19088 tccaacaaaatttaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcagccaca 19187  T
Q  125 tttgccacatttgaatt-aaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    ||||||||||||||||| |||  ||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||| ||    
T  19188 tttgccacatttgaattaaaaaattttaaaaactaactcaaattgatttatatatataatcaataatcgagccatctcatgaacctaacgagtcgaatta 19287  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  19288 tatgtagctcaagttcagctcat 19310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 41609679 - 41609902
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  41609679 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcagccaca 41609778  T
Q  125 tttgccacatttgaattaaatttttt--aaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaact 222  Q
    |||||| |||||||||||| ||||||  ||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||| |||||||||||||    
T  41609779 tttgcctcatttgaattaattttttttaaaaaactaactcaaattgatttatatatataatcgataatcgagtcatctcatgaacccaacgagtcgaact 41609878  T
Q  223 atatgtagcttaagttcagctcat 246  Q
    |||||||||| |||||||||||||    
T  41609879 atatgtagctcaagttcagctcat 41609902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 23206656 - 23206433
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||| | | |||    
T  23206656 tccaacaaaatttaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgttttttccttcaagacaaaattgtattaagcgaca 23206557  T
Q  125 tttgccacatttgaattaa--attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaact 222  Q
    |||||||||||||||||||   ||||||||||||||||||||||| |||||| |||||||| |||||| ||| ||||||||||||||||  |||||||||    
T  23206556 tttgccacatttgaattaatttttttttaaaaactaactcaaattgatttatatatataatcgataattgagtcatctcatgaacctaataagtcgaact 23206457  T
Q  223 atatgtagcttaagttcagctcat 246  Q
    ||||||||||||||||||||||||    
T  23206456 atatgtagcttaagttcagctcat 23206433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 32688972 - 32689183
Alignment:
Q  27 caacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatt 126  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||            
T  32688972 caacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattca-------- 32689063  T
Q  127 tgccacatttgaatt-aaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactata 225  Q
     |||||||||||||| |||  ||||||||||||||||||||| |||||| ||||||||  ||||| ||| |||||||||||| |||||||||||||||||    
T  32689064 -gccacatttgaattaaaaaattttaaaaactaactcaaattgatttatatatataatcaataattgagtcatctcatgaacttaacgagtcgaactata 32689162  T
Q  226 tgtagcttaagttcagctcat 246  Q
    ||||||| |||||||||||||    
T  32689163 tgtagctcaagttcagctcat 32689183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 39134152 - 39134260
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||| | |  |||| |||||||||||||||| |||||  ||||||||| ||||||  |||||||||  ||||||||||||  ||||    
T  39134152 tccaacaaaattcaattaactgataacataattcataatattcttctacttccaaactccaattgctctcctcttcaagacgaaattgtattcagtcaca 39134251  T
Q  125 tttgccaca 133  Q
    |||||||||    
T  39134252 tttgccaca 39134260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 39135308 - 39135368
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| ||||||||||||||||||| |||||| || | ||| |||||||||||||||    
T  39135308 ataatcgagtcatctcatgaacctaacgaatcgaaccatctatagtttaagttcagctcat 39135368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 44574480 - 44574540
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||||||| | |||||||||| |||||| |||||||||||||||| |||||| ||||||    
T  44574480 ataatcgagctaactcatgaaccaaacgagccgaactatatgtagctcaagttcggctcat 44574540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 45714679 - 45714738
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||||| |||||| |||||||||||||| || ||| | ||||||||||||    
T  45714679 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctca 45714738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 33896790 - 33896844
Alignment:
Q  192 gagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||| |||||||||  ||||||||||||||||| || || |||||||||||||    
T  33896790 gagccaactcatgaactaaacgagtcgaactatatataactcaagttcagctcat 33896844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 28242540 - 28242597
Alignment:
Q  189 atcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||| | |||||||||||||||  |||| |||||||| ||||    
T  28242540 atcgagccagctcatgaaccaaccgagtcgaactatatacagctcaagttcagatcat 28242597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 52199346 - 52199403
Alignment:
Q  189 atcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||| |  ||||||||||||||  |||| |||||||||||||    
T  52199346 atcgagccaactcatgaaccaactgagtcgaactatataaagctcaagttcagctcat 52199403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 48506136 - 48505914
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||| |||||    
T  48506136 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgttcttcccttcaagacaaaattgtattcagccaca 48506037  T
Q  125 tttgccacatttgaattaa-attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||| ||||||||||||||||||    
T  48506036 tttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatctcatgtacctaacgagtcgaacta 48505937  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  48505936 tatgtagctcaagttcagctcat 48505914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 28 - 244
Target Start/End: Original strand, 388787 - 389003
Alignment:
Q  28 aacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacattt 127  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||| |  |||||    
T  388787 aacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaaactccaactgctctcc-cttcaagacaaaattgtattcagcgccattt 388885  T
Q  128 gccacatttgaattaaatttt-ttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatat 226  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  388886 gccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactatat 388985  T
Q  227 gtagcttaagttcagctc 244  Q
    |||||| |||||||||||    
T  388986 gtagctcaagttcagctc 389003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 3931064 - 3930842
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||  ||||  |||||||| ||||||||||||| |||||    
T  3931064 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactagtcttcccttcaagacaaaattgtattcagccaca 3930965  T
Q  125 tttgccacatttgaattaa-attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||| ||||||||||| ||||||    
T  3930964 tttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatctcatgtacctaacgagttgaacta 3930865  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  3930864 tatgtagctcaagttcagctcat 3930842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 15434040 - 15434262
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||| |||||    
T  15434040 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactcccactgctcttcccttcaagacaaaattgtattcagccaca 15434139  T
Q  125 tttgccacatttgaattaa-attttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
    ||||||||||||||||||| |   |||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15434140 tttgccacatttgaattaataaaatttaaaaactaactaaaattgatttatatatataatcgataatcgagccatctcatgaagctaacgagtcgaacta 15434239  T
Q  224 tatgtagcttaagttcagctcat 246  Q
     |||||||| |||||||||||||    
T  15434240 gatgtagctcaagttcagctcat 15434262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 49 - 246
Target Start/End: Original strand, 37334099 - 37334297
Alignment:
Q  49 aacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatttgccacatttgaattaaatttt 148  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||| | |||||||||||||||||||||| ||||    
T  37334099 aacaaaattcataatattcttttacttataaactccaactgctcttcccttcaagacaaaattgtattcagcgacatttgccacatttgaattaattttt 37334198  T
Q  149 -ttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
     ||||||||||||||||||| |||||| |||||||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  37334199 tttaaaaactaactcaaattgatttatatatataatcgacaatcgagccatctcatgaacctaatgagtcgaactatatgtagctcaagttcagctcat 37334297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 36926796 - 36927018
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    ||||||||||||  |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  36926796 tccaacaaaattctattagctgtgaacaaaattcataatat-cttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcaaccaca 36926894  T
Q  125 tttgccacatttgaattaaatttttt--aaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaact 222  Q
    |||| |||||||||||||| ||||||  ||||||||||||||||| |||||| ||||||||  |||||| ||| ||||||||| ||||||||||||||||    
T  36926895 tttgtcacatttgaattaattttttttaaaaaactaactcaaattgatttatatatataatcaataatcaagcaatctcatgagcctaacgagtcgaact 36926994  T
Q  223 atatgtagcttaagttcagctcat 246  Q
    |||||||||| ||||||| |||||    
T  36926995 atatgtagctcaagttcaactcat 36927018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 25 - 246
Target Start/End: Complemental strand, 5795275 - 5795062
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||          
T  5795275 tccaacaaaattcaattagttgtgaataaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattca------ 5795182  T
Q  125 tttgccacatttgaattaaatttttt-aaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
       ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||    
T  5795181 ---gccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagttgaacta 5795085  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  5795084 tatgtagctcaagttcagctcat 5795062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 61 - 244
Target Start/End: Original strand, 26216106 - 26216289
Alignment:
Q  61 aatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatttgccacatttgaattaa--attttttaaaaacta 158  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| | ||||||||||||||||||||||   ||||||||||||||    
T  26216106 aatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattcagcgacatttgccacatttgaattaatttttttttaaaaacta 26216205  T
Q  159 actcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctc 244  Q
    ||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26216206 actcaaattgattta--tatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctc 26216289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 42071889 - 42072102
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||| |||||||||||||          
T  42071889 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgttcttcctttcaagacaaaattgtattca------ 42071982  T
Q  125 tttgccacatttgaattaaatttt-ttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
       ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  42071983 ---gccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcaataatcgagtcatctcatgaacctaacgagtcgaacta 42072079  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  42072080 tatgtagctcaagttcagctcat 42072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 43052678 - 43052891
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||          
T  43052678 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaaactccaactgctcttcccttcaagacaaaattgtattca------ 43052771  T
Q  125 tttgccacatttgaatt-aaattttttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaacta 223  Q
       |||||||||||||| |||   |||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  43052772 ---gccacatttgaattaaaaaaatttaaaaactaactcaaattgatttatatatataatcgataatcgagtcatctcatgaatctaacgagtcgaacta 43052868  T
Q  224 tatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||||||    
T  43052869 tatgtagctcaagttcagctcat 43052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 28950019 - 28949884
Alignment:
Q  113 tattcaaccacatttgccacatttgaattaaattttttaaaaa--ctaactcaaatttatttatctatataattgataatcgagccatctcatgaaccta 210  Q
    |||||| |||||||||||||||||||||||| |||||||||||  ||| |||||||| |||||| |||||||| |||||||||| ||| |||||||||||    
T  28950019 tattcagccacatttgccacatttgaattaatttttttaaaaaaactacctcaaattgatttatatatataatcgataatcgagtcatttcatgaaccta 28949920  T
Q  211 acgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||||||||||||||||||| |||||||||||||    
T  28949919 acgagtcgaactatatgtagctcaagttcagctcat 28949884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 5776349 - 5776256
Alignment:
Q  153 aaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||||||||| |||| | |||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  5776349 aaactaactcaaattgatttttatatataatcgataatcgagtcatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcat 5776256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 7444186 - 7444294
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||| |||||  ||||||||| ||||||   ||| |||| ||||||||||||| ||||     
T  7444186 tccaacaaaattcaattagccgagaacataattcataatattcttctacttccaaactccaattgctctccccttaaagacaaaattgtattcagccact 7444285  T
Q  125 tttgccaca 133  Q
    |||||||||    
T  7444286 tttgccaca 7444294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 666043 - 665973
Alignment:
Q  176 tatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  666043 tatataaacgataatcgagccatctcatgaacctaacgagtcgagctatatgtagctcaaattcagctcat 665973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 45174986 - 45175092
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccaca 124  Q
    |||||||||||| || |||| | |||||||||||||||||||||| ||||| |||||||||| ||||||   ||| |||| ||||||||||||| |||||    
T  45174986 tccaacaaaattcaagtagctgagaacaaaattcataatattcttctacttctaaactccaattgctctcccctttaagacaaaattgtattcagccaca 45175085  T
Q  125 tttgcca 131  Q
    | |||||    
T  45175086 tctgcca 45175092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 45176204 - 45176264
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  45176204 ataatcgagtcatctcatgaacctaacgagtcgaattatatgtagctcaagttcaactcat 45176264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 28950071 - 28950018
Alignment:
Q  25 tccaacaaaatttaattagccgtgaacaaaattcataatattcttttactttta 78  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  28950071 tccaacaaaattcaattagctatgaacaaaattcataatattcttttactttta 28950018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 20400955 - 20401015
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||| |||||| ||||| |||| |||||||||||||||||||| || |||||||||||||    
T  20400955 ataattgagccaactcattaaccaaacgagtcgaactatatgtaactcaagttcagctcat 20401015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 27231725 - 27231672
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttc 239  Q
    ||||||||| ||||||||||||| |||||||| ||||| || ||||||||||||    
T  27231725 ataatcgagtcatctcatgaaccaaacgagtcaaactacatatagcttaagttc 27231672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 44422085 - 44422028
Alignment:
Q  189 atcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    ||||||||| |||||||||| | |||||||||||||||  |||| |||||||||||||    
T  44422085 atcgagccaactcatgaaccaaccgagtcgaactatataaagctcaagttcagctcat 44422028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 3942135 - 3942194
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||||| |||||| |||||| ||||||| || ||||| ||||||||||||    
T  3942135 ataatcgagtcatctcgtgaaccaaacgagccgaactacatatagctcaagttcagctca 3942194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 5283063 - 5283008
Alignment:
Q  190 tcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||| |||||| |||||| |||||||||||||| || ||||||||||||| ||||    
T  5283063 tcgagtcatctcgtgaaccaaacgagtcgaactacatatagcttaagttcaactca 5283008  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 45176126 - 45176162
Alignment:
Q  145 ttttttaaaaactaactcaaatttatttatctatata 181  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  45176126 ttttttaaaaactaactcaaattgatttatatatata 45176162  T

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Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 47 - 246
Target Start/End: Original strand, 453304 - 453497
Alignment:
Q  47 tgaacaaaattcataatattcttttacttttaaactccaactgctcttttc--ttcaagaaaaaattgtattcaaccacatttgccacatttgaattaaa 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||         ||||||||||||||||     
T  453304 tgaacaaaattcataatattcttttacttttaaactccaactgctctcttcccttcaagacaaaattgtattca---------gccacatttgaattaat 453394  T
Q  145 tttt-ttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagct 243  Q
    |||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  453395 tttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaact 453494  T

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Target: chr8; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 49 - 246
Target Start/End: Original strand, 11161397 - 11161586
Alignment:
Q  49 aacaaaattcataatattcttttacttttaaactccaactgctcttttcttcaagaaaaaattgtattcaaccacatttgccacatttgaattaaattt- 147  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||  |||||||| |||||||||||||         |||||||||||||||||        
T  11161397 aacaaaattcataatattattttacttttaaacttcaactgctcttcccttcaagacaaaattgtattca---------gccacatttgaattaaacaaa 11161487  T
Q  148 tttaaaaactaactcaaatttatttatctatataattgataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctcat 246  Q
    |||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11161488 tttaaaaactaactcaaattgatttatatatataatccataatcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcat 11161586  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 34516092 - 34516151
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| |||||| |||||| |||||||||||||| || ||| | ||||||||||||    
T  34516092 ataatcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctca 34516151  T

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Target: scaffold0204 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 26796 - 26748
Alignment:
Q  197 atctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||| |||||| |||||||||||||| || ||||||||||||||||||    
T  26796 atctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctca 26748  T

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Target: scaffold0224 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 7494 - 7435
Alignment:
Q  186 ataatcgagccatctcatgaacctaacgagtcgaactatatgtagcttaagttcagctca 245  Q
    ||||||||| ||||||||||||| |||||||||| |||||| | | | ||||||||||||    
T  7494 ataatcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctca 7435  T

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