View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12942_low_76 (Length: 242)
Name: NF12942_low_76
Description: NF12942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12942_low_76 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 43831907 - 43832135
Alignment:
| Q |
1 |
ccttgttagcaataccctctattgtcttcaaacacttcatcatcattgatgtttccacttgttcttcattcaaacaaattcctatatgagaataatcatg |
100 |
Q |
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| T |
43831907 |
ccttgttagcaataccctccattgtcttcaaacacttcatcatcattgatgtttccacttgttcttcattcaaacaaattcctatatgagaataatcatg |
43832006 |
T |
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| Q |
101 |
atcaaccttcacggagagaagtttctcttcattctcagctaagccgttatttaccaactttgtagccatgccaagcaatgagagagaaaagtgatgaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43832007 |
atcaaccttcacggagagaagtttctcttcatcctcagctaagccgttatttaccaactttgtagccatgccaagcaatgagagagaaaagtgatgaaca |
43832106 |
T |
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| Q |
201 |
tgtatacaaggtgtcgtacatgttattat |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
43832107 |
tgtatacaaggtgtcgtacatgttattat |
43832135 |
T |
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