View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12943_high_73 (Length: 214)
Name: NF12943_high_73
Description: NF12943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12943_high_73 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 14526706 - 14526907
Alignment:
| Q |
13 |
aatataatctgtgtactaagatcataaatattgtaaacaatataatcaaccaaagaaagtgattcagattggaccatccagaaaatgaagaaaccagtcc |
112 |
Q |
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| T |
14526706 |
aatataatcagtgtactaagatcataaatattgtaaacaatataatcaaccaaagaaagtgattcagattggaccatccagaaaatgaagaaaccagtcc |
14526805 |
T |
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| Q |
113 |
ctctcatattttctcaatgcctcaaactacttctaatcaagtttgtactactatcagaaactataatagcagaaccaagagcagagacagttatgataac |
212 |
Q |
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| T |
14526806 |
ctctcatattttctcaatgcctcaaactacttctaatcaagtttgtactactatcagaaactataatagcagaaccaagagcaaagacagttatgataac |
14526905 |
T |
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| Q |
213 |
at |
214 |
Q |
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|| |
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| T |
14526906 |
at |
14526907 |
T |
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