View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12943_low_71 (Length: 230)

Name: NF12943_low_71
Description: NF12943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12943_low_71
NF12943_low_71
[»] chr2 (38 HSPs)
chr2 (17-153)||(31862128-31862269)
chr2 (16-149)||(43648035-43648173)
chr2 (22-149)||(41961121-41961253)
chr2 (22-133)||(26357858-26357974)
chr2 (22-153)||(19289109-19289245)
chr2 (22-152)||(41465782-41465917)
chr2 (22-138)||(18494082-18494203)
chr2 (17-149)||(33709022-33709159)
chr2 (25-133)||(35959176-35959289)
chr2 (26-149)||(2325168-2325296)
chr2 (23-137)||(19424444-19424563)
chr2 (17-138)||(7006739-7006865)
chr2 (22-149)||(4167203-4167335)
chr2 (30-149)||(33660167-33660291)
chr2 (74-138)||(45328028-45328092)
chr2 (63-153)||(29241931-29242021)
chr2 (22-138)||(43770649-43770770)
chr2 (22-149)||(4763912-4764045)
chr2 (22-138)||(5881810-5881931)
chr2 (22-149)||(11366170-11366303)
chr2 (66-137)||(39167171-39167242)
chr2 (66-149)||(44913997-44914080)
chr2 (63-129)||(33902341-33902407)
chr2 (63-123)||(33550799-33550859)
chr2 (72-149)||(3177275-3177352)
chr2 (28-115)||(19500739-19500831)
chr2 (63-147)||(31570526-31570610)
chr2 (22-133)||(37905991-37906108)
chr2 (22-148)||(27349744-27349870)
chr2 (63-129)||(41463400-41463466)
chr2 (22-130)||(13711740-13711853)
chr2 (63-127)||(41051112-41051176)
chr2 (65-110)||(17053960-17054005)
chr2 (65-110)||(17071601-17071646)
chr2 (92-138)||(4263710-4263756)
chr2 (63-137)||(18257340-18257414)
chr2 (19-77)||(19314125-19314181)
chr2 (22-77)||(4478646-4478699)
[»] chr5 (52 HSPs)
chr5 (22-153)||(22981074-22981210)
chr5 (22-152)||(24886368-24886503)
chr5 (41-153)||(23954560-23954670)
chr5 (17-149)||(38527999-38528136)
chr5 (22-149)||(699431-699563)
chr5 (22-153)||(12910636-12910772)
chr5 (22-153)||(22973840-22973976)
chr5 (26-153)||(31786404-31786536)
chr5 (22-149)||(35511244-35511376)
chr5 (22-138)||(39573092-39573213)
chr5 (22-149)||(15992302-15992434)
chr5 (22-145)||(22255463-22255591)
chr5 (22-147)||(8437246-8437376)
chr5 (20-149)||(31705374-31705508)
chr5 (63-153)||(43254182-43254272)
chr5 (22-149)||(36867043-36867175)
chr5 (22-129)||(35826268-35826380)
chr5 (22-149)||(42343002-42343134)
chr5 (17-138)||(7693497-7693623)
chr5 (29-153)||(27318246-27318376)
chr5 (17-149)||(22019899-22020036)
chr5 (22-149)||(36860705-36860837)
chr5 (22-149)||(2888207-2888339)
chr5 (22-137)||(33908514-33908633)
chr5 (63-150)||(8741646-8741733)
chr5 (23-149)||(19120141-19120272)
chr5 (63-149)||(23115992-23116078)
chr5 (26-147)||(25889655-25889781)
chr5 (17-149)||(28416313-28416450)
chr5 (22-138)||(35504646-35504767)
chr5 (22-149)||(40133666-40133798)
chr5 (23-150)||(5837837-5837969)
chr5 (22-149)||(25669857-25669989)
chr5 (22-149)||(27330585-27330717)
chr5 (63-138)||(7208637-7208712)
chr5 (17-149)||(14409103-14409240)
chr5 (17-138)||(17157804-17157930)
chr5 (22-151)||(43308420-43308554)
chr5 (20-149)||(9200503-9200637)
chr5 (63-149)||(26269136-26269222)
chr5 (22-121)||(5830173-5830278)
chr5 (22-138)||(35934177-35934298)
chr5 (22-149)||(25500688-25500820)
chr5 (63-138)||(30969096-30969172)
chr5 (63-138)||(14919312-14919387)
chr5 (63-138)||(32563467-32563542)
chr5 (22-137)||(8467007-8467127)
chr5 (63-138)||(15724815-15724890)
chr5 (26-137)||(21088542-21088656)
chr5 (24-149)||(13956126-13956254)
chr5 (111-153)||(34853853-34853895)
chr5 (22-77)||(1429003-1429056)
[»] chr1 (53 HSPs)
chr1 (22-149)||(30254700-30254832)
chr1 (22-149)||(32216332-32216464)
chr1 (16-137)||(21289871-21289997)
chr1 (22-149)||(2960025-2960157)
chr1 (22-153)||(10923004-10923140)
chr1 (22-149)||(34012149-34012281)
chr1 (22-139)||(28564560-28564682)
chr1 (22-153)||(23999624-23999761)
chr1 (22-153)||(11742131-11742267)
chr1 (22-149)||(14758309-14758441)
chr1 (25-149)||(32267314-32267443)
chr1 (22-138)||(37451562-37451683)
chr1 (22-149)||(46931686-46931819)
chr1 (22-138)||(1547548-1547669)
chr1 (22-153)||(10181770-10181906)
chr1 (26-138)||(39393665-39393782)
chr1 (22-148)||(19899536-19899668)
chr1 (22-153)||(27266964-27267099)
chr1 (22-149)||(27532749-27532880)
chr1 (22-153)||(27563668-27563804)
chr1 (22-149)||(38823491-38823623)
chr1 (22-149)||(48353819-48353951)
chr1 (22-136)||(16415923-16416042)
chr1 (22-137)||(8222405-8222525)
chr1 (22-138)||(3535200-3535321)
chr1 (22-138)||(7078841-7078962)
chr1 (22-149)||(15168373-15168505)
chr1 (22-129)||(47279466-47279578)
chr1 (63-145)||(27763081-27763163)
chr1 (22-139)||(28769930-28770052)
chr1 (67-149)||(48620916-48620998)
chr1 (17-149)||(4330553-4330690)
chr1 (22-133)||(9902837-9902953)
chr1 (63-138)||(31621326-31621402)
chr1 (26-153)||(47682257-47682389)
chr1 (63-149)||(15752352-15752438)
chr1 (22-129)||(238300-238412)
chr1 (26-145)||(15383214-15383339)
chr1 (22-102)||(18422928-18423006)
chr1 (22-137)||(22170988-22171108)
chr1 (22-121)||(27227280-27227384)
chr1 (22-138)||(51129136-51129255)
chr1 (63-138)||(31962939-31963015)
chr1 (22-129)||(42721313-42721425)
chr1 (22-123)||(25160909-25161016)
chr1 (63-149)||(1359703-1359788)
chr1 (22-122)||(3309430-3309536)
chr1 (63-147)||(33725380-33725465)
chr1 (22-116)||(30326751-30326851)
chr1 (22-133)||(40885090-40885207)
chr1 (96-153)||(38759846-38759903)
chr1 (22-116)||(37618705-37618800)
chr1 (63-137)||(41926479-41926553)
[»] chr7 (45 HSPs)
chr7 (22-152)||(18797583-18797718)
chr7 (22-153)||(37703267-37703403)
chr7 (17-153)||(9355595-9355736)
chr7 (22-153)||(31578833-31578969)
chr7 (20-149)||(24211995-24212130)
chr7 (22-138)||(26587876-26587997)
chr7 (22-149)||(35353364-35353496)
chr7 (22-147)||(29173778-29173908)
chr7 (26-153)||(7335053-7335185)
chr7 (22-153)||(31520510-31520646)
chr7 (22-149)||(32432708-32432840)
chr7 (22-146)||(46480905-46481034)
chr7 (22-152)||(44411310-44411445)
chr7 (22-149)||(15612532-15612664)
chr7 (22-149)||(30055783-30055915)
chr7 (66-137)||(23111497-23111568)
chr7 (63-149)||(6546821-6546907)
chr7 (63-149)||(38258881-38258967)
chr7 (22-138)||(8861541-8861662)
chr7 (22-129)||(32820846-32820958)
chr7 (22-149)||(17842357-17842489)
chr7 (22-129)||(25691337-25691449)
chr7 (22-149)||(37110130-37110262)
chr7 (22-133)||(48928086-48928202)
chr7 (63-138)||(10358998-10359073)
chr7 (22-152)||(10481861-10481996)
chr7 (22-116)||(11071459-11071558)
chr7 (67-138)||(21991933-21992004)
chr7 (22-139)||(37347277-37347399)
chr7 (63-149)||(26980608-26980694)
chr7 (22-149)||(12390422-12390554)
chr7 (22-149)||(15672532-15672664)
chr7 (22-129)||(22687487-22687599)
chr7 (25-122)||(43925354-43925456)
chr7 (63-149)||(41764851-41764937)
chr7 (22-152)||(37704438-37704573)
chr7 (22-149)||(27284000-27284134)
chr7 (22-133)||(4583175-4583291)
chr7 (87-147)||(12166215-12166275)
chr7 (22-133)||(32592996-32593111)
chr7 (22-131)||(34361967-34362083)
chr7 (22-138)||(5657264-5657386)
chr7 (96-148)||(33688066-33688118)
chr7 (72-149)||(44598978-44599054)
chr7 (22-92)||(12165999-12166074)
[»] chr8 (41 HSPs)
chr8 (22-153)||(37970293-37970429)
chr8 (22-153)||(43643369-43643505)
chr8 (22-153)||(5299720-5299856)
chr8 (22-149)||(16446653-16446785)
chr8 (17-153)||(31933660-31933801)
chr8 (22-137)||(35459501-35459621)
chr8 (63-149)||(35859260-35859346)
chr8 (22-149)||(1149410-1149542)
chr8 (22-149)||(34895242-34895374)
chr8 (22-149)||(38644258-38644390)
chr8 (22-152)||(23854207-23854341)
chr8 (63-153)||(41362748-41362838)
chr8 (22-153)||(4132460-4132596)
chr8 (22-138)||(7890746-7890867)
chr8 (22-149)||(466112-466244)
chr8 (22-129)||(27082636-27082748)
chr8 (22-153)||(10554978-10555114)
chr8 (63-149)||(1953766-1953852)
chr8 (63-149)||(8803594-8803680)
chr8 (22-127)||(24823194-24823304)
chr8 (21-138)||(44869776-44869898)
chr8 (22-133)||(1205207-1205323)
chr8 (22-148)||(33906492-33906621)
chr8 (22-136)||(12587862-12587981)
chr8 (63-138)||(34951846-34951921)
chr8 (22-149)||(11727304-11727437)
chr8 (22-153)||(16223143-16223282)
chr8 (152-217)||(36050997-36051062)
chr8 (17-120)||(6098320-6098428)
chr8 (22-139)||(12876390-12876512)
chr8 (63-138)||(33198128-33198203)
chr8 (22-139)||(40862699-40862822)
chr8 (63-149)||(30654361-30654446)
chr8 (72-153)||(18259414-18259495)
chr8 (22-138)||(39098908-39099029)
chr8 (74-129)||(43026011-43026066)
chr8 (72-138)||(36694755-36694821)
chr8 (89-153)||(13307931-13307995)
chr8 (90-133)||(41910852-41910895)
chr8 (99-149)||(9864533-9864583)
chr8 (17-91)||(1149756-1149835)
[»] chr6 (15 HSPs)
chr6 (22-149)||(6090953-6091085)
chr6 (22-149)||(8513509-8513634)
chr6 (17-149)||(3879710-3879847)
chr6 (22-149)||(7054543-7054676)
chr6 (22-138)||(33892794-33892915)
chr6 (63-149)||(1946162-1946249)
chr6 (22-149)||(20768363-20768495)
chr6 (63-149)||(5627719-5627805)
chr6 (17-138)||(29182440-29182563)
chr6 (22-122)||(6089184-6089282)
chr6 (22-149)||(7234803-7234938)
chr6 (23-116)||(4318626-4318724)
chr6 (73-139)||(33619170-33619236)
chr6 (63-117)||(33724062-33724116)
chr6 (29-125)||(21016913-21017014)
[»] chr4 (49 HSPs)
chr4 (22-149)||(19440446-19440578)
chr4 (22-153)||(25184394-25184530)
chr4 (22-147)||(33816316-33816446)
chr4 (20-149)||(34361289-34361424)
chr4 (22-147)||(28002786-28002916)
chr4 (22-153)||(879342-879478)
chr4 (22-149)||(6864316-6864448)
chr4 (22-149)||(7703790-7703922)
chr4 (26-128)||(1815586-1815693)
chr4 (22-138)||(55240914-55241035)
chr4 (22-137)||(32579727-32579847)
chr4 (22-149)||(37775939-37776071)
chr4 (20-138)||(23761350-23761473)
chr4 (63-149)||(26896415-26896501)
chr4 (22-135)||(33341679-33341797)
chr4 (63-149)||(49376294-49376380)
chr4 (22-131)||(50765001-50765115)
chr4 (22-149)||(32912377-32912510)
chr4 (22-149)||(3042900-3043032)
chr4 (22-149)||(19089251-19089383)
chr4 (20-138)||(27396895-27397016)
chr4 (22-137)||(35020841-35020965)
chr4 (22-145)||(37663543-37663671)
chr4 (26-149)||(46887956-46888084)
chr4 (23-137)||(47254022-47254141)
chr4 (63-153)||(36493483-36493573)
chr4 (22-138)||(39400289-39400410)
chr4 (22-137)||(7152014-7152134)
chr4 (22-148)||(9139510-9139639)
chr4 (22-149)||(29583998-29584130)
chr4 (22-148)||(23431836-23431967)
chr4 (22-123)||(55477715-55477821)
chr4 (63-149)||(25700854-25700940)
chr4 (22-135)||(35025379-35025496)
chr4 (22-149)||(17272245-17272377)
chr4 (22-138)||(30002450-30002571)
chr4 (64-133)||(32592412-32592481)
chr4 (22-149)||(37288009-37288142)
chr4 (63-149)||(4598309-4598395)
chr4 (22-149)||(4205265-4205397)
chr4 (63-148)||(38012589-38012674)
chr4 (26-138)||(50697527-50697644)
chr4 (22-119)||(34947923-34948025)
chr4 (77-149)||(5047764-5047836)
chr4 (22-138)||(17167994-17168115)
chr4 (72-149)||(17173626-17173703)
chr4 (63-137)||(4934022-4934097)
chr4 (31-129)||(46883932-46884035)
chr4 (22-149)||(42200011-42200143)
[»] chr3 (56 HSPs)
chr3 (22-149)||(40552031-40552163)
chr3 (26-149)||(1089969-1090097)
chr3 (22-149)||(4015731-4015863)
chr3 (22-137)||(46297546-46297666)
chr3 (63-153)||(20373031-20373121)
chr3 (17-137)||(29164076-29164194)
chr3 (17-136)||(11357166-11357290)
chr3 (22-149)||(22622490-22622622)
chr3 (22-149)||(33378557-33378689)
chr3 (26-149)||(39282928-39283056)
chr3 (63-149)||(21009573-21009659)
chr3 (17-153)||(3362522-3362663)
chr3 (22-153)||(14586448-14586584)
chr3 (22-149)||(21193879-21194011)
chr3 (22-149)||(26941032-26941164)
chr3 (22-153)||(48355213-48355349)
chr3 (22-149)||(37157980-37158112)
chr3 (23-137)||(44891770-44891889)
chr3 (63-149)||(37203386-37203472)
chr3 (22-136)||(52040707-52040826)
chr3 (65-138)||(2008259-2008332)
chr3 (22-149)||(42505847-42505979)
chr3 (22-149)||(53228924-53229056)
chr3 (19-149)||(54506076-54506212)
chr3 (63-153)||(22445833-22445923)
chr3 (22-149)||(29099618-29099751)
chr3 (63-149)||(11356930-11357016)
chr3 (48-137)||(11467115-11467202)
chr3 (63-145)||(47481841-47481923)
chr3 (20-131)||(4761438-4761554)
chr3 (17-129)||(7327274-7327391)
chr3 (63-138)||(33698471-33698546)
chr3 (21-149)||(36012410-36012544)
chr3 (17-149)||(43975664-43975801)
chr3 (63-146)||(24707890-24707973)
chr3 (22-127)||(22451240-22451350)
chr3 (22-153)||(51212545-51212675)
chr3 (22-122)||(44186316-44186421)
chr3 (73-148)||(25580067-25580142)
chr3 (20-137)||(3654983-3655108)
chr3 (22-139)||(24488743-24488866)
chr3 (75-138)||(35844577-35844640)
chr3 (23-133)||(40936246-40936361)
chr3 (63-122)||(50475136-50475195)
chr3 (17-145)||(32373737-32373869)
chr3 (74-152)||(27480127-27480205)
chr3 (22-98)||(34133207-34133288)
chr3 (99-149)||(34133312-34133362)
chr3 (63-98)||(38592016-38592051)
chr3 (22-60)||(11835499-11835537)
chr3 (87-129)||(43348556-43348598)
chr3 (22-60)||(45174778-45174816)
chr3 (22-60)||(53811600-53811638)
chr3 (17-58)||(50475078-50475119)
chr3 (22-77)||(46994512-46994565)
chr3 (22-77)||(54828552-54828605)
[»] scaffold0008 (1 HSPs)
scaffold0008 (22-153)||(267566-267693)
[»] scaffold0318 (1 HSPs)
scaffold0318 (22-149)||(12190-12321)
[»] scaffold0291 (1 HSPs)
scaffold0291 (22-149)||(8168-8300)
[»] scaffold0002 (3 HSPs)
scaffold0002 (17-149)||(93873-94009)
scaffold0002 (25-122)||(412-514)
scaffold0002 (22-127)||(408223-408333)
[»] scaffold0061 (1 HSPs)
scaffold0061 (63-137)||(44283-44357)
[»] scaffold0022 (1 HSPs)
scaffold0022 (63-149)||(145787-145873)
[»] scaffold0017 (1 HSPs)
scaffold0017 (63-137)||(154430-154504)


Alignment Details
Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 31862128 - 31862269
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||       |||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  31862128 acttgtaagtccaagatattgtagacattactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaa 31862227  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  31862228 attaactttttcaaaaaagtcagtttcccgactgcaccatag 31862269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 43648173 - 43648035
Alignment:
Q  16 cacttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaa 110  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  43648173 cacttgtaagtccaagatgtcgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaa 43648074  T
Q  111 aattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||||||| |||||||||| ||||| |||||||||    
T  43648073 aattaactttttcaaaaaagtcaatttcctgactgcacc 43648035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 41961121 - 41961253
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  41961121 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 41961220  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||||||||| |||||||||    
T  41961221 ctttttcaaaaaattcagtttcctgactgcacc 41961253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 26357858 - 26357974
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  26357858 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 26357957  T
Q  117 cttttttaaaaaagtca 133  Q
    |||||||||||||||||    
T  26357958 cttttttaaaaaagtca 26357974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 19289245 - 19289109
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca-------acaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    |||||||||||| |||||  |||||||||||||||||||  ||| |||||||||||       ||||||||||||||||| |||||||||||||||||||    
T  19289245 taagtccaagatattgcaagcattactagatgaattact--attgatcattaatcagaaattaacaatttaaaaatgaattaaacattaagatcaaaatt 19289148  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||| ||||||||||||||||  ||||||||||||    
T  19289147 aactttttcaaaaaagtcagtttcctaactgcaccatag 19289109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 41465782 - 41465917
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||| ||||||||||       ||||||||  |||||||||||||||| |||||| ||||||||||||||||||||    
T  41465782 taagtccaagatgttgcaaacattactatatgaattactattgatcattaatcagcaatcaacaatttaaaattgaatcgaacattaagatcaaaattaa 41465881  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccata 152  Q
    |||||| |||||||||||||| |  |||||||||||    
T  41465882 ctttttcaaaaaagtcagttttctaactgcaccata 41465917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 18494203 - 18494082
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||| |  |||||||||||||||| ||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  18494203 taagtccaagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 18494104  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||||||||    
T  18494103 ctttttcaaaaaagtcagtttc 18494082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 33709159 - 33709022
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||| ||||||||||||||  |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| || |||    
T  33709159 acttgtaaatccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaa 33709060  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||| |||||| ||||| ||  |||||||||    
T  33709059 attaactttttcaaaaaattcagtatcatgactgcacc 33709022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 35959176 - 35959289
Alignment:
Q  25 gtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactt 119  Q
    |||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35959176 gtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactt 35959275  T
Q  120 ttttaaaaaagtca 133  Q
    ||| ||||||||||    
T  35959276 tttcaaaaaagtca 35959289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 2325296 - 2325168
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    ||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2325296 tccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttt 2325197  T
Q  121 tttaaaaaagtcagtttcccgactgcacc 149  Q
    || |||||| ||| ||| | |||||||||    
T  2325196 ttaaaaaaaatcaattttctgactgcacc 2325168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 19424563 - 19424444
Alignment:
Q  23 aagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    ||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  19424563 aagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 19424464  T
Q  118 ttttttaaaaaagtcagttt 137  Q
    ||||| ||||||||||||||    
T  19424463 tttttcaaaaaagtcagttt 19424444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 7006865 - 7006739
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  |||||||||||||||| ||       |||||||| |||||||||||||||||||||||||||||||| ||| |||    
T  7006865 acttgtaagtccaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattatgattaaa 7006766  T
Q  112 attaacttttttaaaaaagtcagtttc 138  Q
    ||||||||||| |||||||||| ||||    
T  7006765 attaactttttcaaaaaagtcattttc 7006739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 4167203 - 4167335
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  ||||||| |||||||||||  |||||||||       ||||||||||||||||||||||| |||||||||||| ||||||    
T  4167203 taagtccaagatgttgcaagcattactggatgaattact--attaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaatt 4167300  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||| ||| | |||||||||    
T  4167301 aactttttcaaaaaagtcaattttctgactgcacc 4167335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 33660291 - 33660167
Alignment:
Q  30 agatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttta 124  Q
    ||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||| |    
T  33660291 agatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttca 33660192  T
Q  125 aaaaagtcagtttcccgactgcacc 149  Q
     |||||||||||||  |||||||||    
T  33660191 gaaaagtcagtttcatgactgcacc 33660167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 45328028 - 45328092
Alignment:
Q  74 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45328028 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagtttc 45328092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 29242021 - 29241931
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||  ||||||||| |||||||||||||    
T  29242021 attaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaagttcagtttcctgactgcaccatag 29241931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 43770770 - 43770649
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaat-------caacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||| ||||||||||||  |||||||||||||||| ||  ||| |||||||||       |||||||||||||||||||||||||||||||| ||||||    
T  43770770 taagttcaagatgttgcaagcattactagatgaatttct--attgatcattaattagaaatcaacaatttaaaaatgaatcaaacattaagattaaaatt 43770673  T
Q  115 aacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||||||||||    
T  43770672 aactttttcaaaaaagtcagtttc 43770649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 4763912 - 4764045
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||| |||||  ||||||||| |||||||||       |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  4763912 taagtccaagatattgcaagcattactagttgaattactattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaa 4764011  T
Q  117 c-ttttttaaaaaagtcagtttcccgactgcacc 149  Q
    | |||||| |||||||||||||||  ||||||||    
T  4764012 cttttttttaaaaagtcagtttccttactgcacc 4764045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 5881810 - 5881931
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  5881810 taagtctaagatgttgcaagcattactagatgaattactattgatcattattcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 5881909  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| | |||| ||||||||    
T  5881910 ctttttcataaaaatcagtttc 5881931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 11366303 - 11366170
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| || |||||||    
T  11366303 taagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaatta 11366204  T
Q  116 acttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||| |||||| ||| ||| | |||||||||    
T  11366203 actttttcaaaaaaatcaattttctgactgcacc 11366170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 39167242 - 39167171
Alignment:
Q  66 aatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  39167242 aatcagtaatcaacaatttaaaaatgaataaaacattaagattaaaattaactttttcaaaaaagtcagttt 39167171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 44913997 - 44914080
Alignment:
Q  66 aatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||  |||||| | |||||||||    
T  44913997 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaaaccagtttgctgactgcacc 44914080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 33902341 - 33902407
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaa 129  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33902341 attaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttttaaaaaa 33902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 33550859 - 33550799
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttt 123  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33550859 attaaccagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttt 33550799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 3177275 - 3177352
Alignment:
Q  72 taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||| ||||| ||||||||||||| || |||| ||||||||| |||||||||||||||| |||||||||    
T  3177275 taatcaacaatttgaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaagtcagtttcctgactgcacc 3177352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 19500831 - 19500739
Alignment:
Q  28 caagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  19500831 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaatta 19500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 31570610 - 31570526
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgca 147  Q
    |||||||| |||||||  ||||||||||||||||| |||||| || |||||||||||||| |||||||||||||||  |||||||    
T  31570610 attaatcagtaatcaaatatttaaaaatgaatcaatcattaaaatgaaaattaactttttaaaaaaagtcagtttcatgactgca 31570526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 37905991 - 37906108
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaa-tcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||   |||||| |||||||||||       |||||||| |||| ||||||||||||||||| ||||||||||| ||||||||||    
T  37905991 taagtccaagatgttgcaagaattactggatgaattactattgatcattaatcagtaattaacaatttaaaaatgaaatcaaacattaaaatcaaaatta 37906090  T
Q  116 acttttttaaaaaagtca 133  Q
    | ||||| ||||||||||    
T  37906091 attttttcaaaaaagtca 37906108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 27349870 - 27349744
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||     | ||||||||    
T  27349870 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatat-----ttaaaattaa 27349776  T
Q  117 cttttttaaaaaagtcagtttcccgactgcac 148  Q
    |||||| | |||||||||||||  ||||||||    
T  27349775 ctttttcagaaaagtcagtttcatgactgcac 27349744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 41463466 - 41463400
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaa 129  Q
    |||||||| |||| || |||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  41463466 attaatcaataattaataatttaaaaatgaatcaatcattaagattaaaattaactttttaaaaaaa 41463400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 13711740 - 13711853
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| ||||||||||| ||| ||||||||||||||||       |||||||| |||||||| ||||||||||||||||| |||| | || ||||||||    
T  13711740 taagtctaagatgttgcaaacaatactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaatcatttaaattaaaattaa 13711839  T
Q  117 cttttttaaaaaag 130  Q
     ||||| |||||||    
T  13711840 ttttttcaaaaaag 13711853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 41051176 - 41051112
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaa 127  Q
    |||||||| |||||||||||| |||||||||||||||||||| || |||||||| ||||| ||||    
T  41051176 attaatcaataatcaacaattcaaaaatgaatcaaacattaaaattaaaattaattttttcaaaa 41051112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 17054005 - 17053960
Alignment:
Q  65 taatcattaatcaacaatttaaaaatgaatcaaacattaagatcaa 110  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  17054005 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17053960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 17071646 - 17071601
Alignment:
Q  65 taatcattaatcaacaatttaaaaatgaatcaaacattaagatcaa 110  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  17071646 taatcagtaatcaacaatgtaaaaatgaatcaaacattaagatcaa 17071601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 4263756 - 4263710
Alignment:
Q  92 aatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||    
T  4263756 aatcaaacattaagattaaaattaactttttaaaaaaaatcagtttc 4263710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 18257414 - 18257340
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    |||||||| ||||| ||||||| ||||||||| ||  ||||| || |||||||||||||| | ||||||||||||    
T  18257414 attaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaactttttcacaaaagtcagttt 18257340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 19314125 - 19314181
Alignment:
Q  19 ttataagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca 77  Q
    ||||||||| |||||||||||  |||||||||||||||||||  ||| |||||||||||    
T  19314125 ttataagtctaagatgttgcaagcattactagatgaattact--attgatcattaatca 19314181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 4478646 - 4478699
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca 77  Q
    ||||||||||||||||||  |||||||||||||||| ||  ||| |||||||||||    
T  4478646 taagtccaagatgttgcaagcattactagatgaattgct--attgatcattaatca 4478699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 22981074 - 22981210
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||||| |       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22981074 taagtccaagatgttgcaatcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 22981173  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  22981174 ctttttttaaaaagtcagtttcctgactgcaccatag 22981210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 24886368 - 24886503
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  24886368 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 24886467  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccata 152  Q
    |||||| |||||||||||||||  ||||||||||||    
T  24886468 ctttttcaaaaaagtcagtttcttgactgcaccata 24886503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 23954670 - 23954560
Alignment:
Q  41 acattactagatgaattactcaattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttccc 140  Q
    |||||||| |||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||     
T  23954670 acattacttgatgaattact--attgatcattaatcaacaatttaaaaatgaattaaacattaagatcataattaactttttcaaaaaagtcagtttcct 23954573  T
Q  141 gactgcaccatag 153  Q
    |||||||||||||    
T  23954572 gactgcaccatag 23954560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 38528136 - 38527999
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  38528136 acttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 38528037  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||| |||||| ||||||||| |||||||||    
T  38528036 attaactttttcaaaaaaatcagtttcctgactgcacc 38527999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 699431 - 699563
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  699431 taagtccaagatgttgcaagcattactagatgaattactattgattattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaa 699530  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||  |||||||||||||||| |||||||||    
T  699531 cttttccaaaaaagtcagtttcctgactgcacc 699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 12910636 - 12910772
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  12910636 taagtccaagatgttgcaagcattactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaa 12910735  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||  |||||||||||||||| |||||||||||||    
T  12910736 cttttccaaaaaagtcagtttcctgactgcaccatag 12910772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 22973976 - 22973840
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  22973976 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 22973877  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||| ||||||| | |||||||||||||    
T  22973876 ctttttaaaaaaaatcagttttctgactgcaccatag 22973840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 31786536 - 31786404
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    ||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31786536 tccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaatatcaaaattaacttt 31786437  T
Q  121 tttaaaaaagtcagtttcccgactgcaccatag 153  Q
    || |||||||||||||||| || ||||||||||    
T  31786436 ttcaaaaaagtcagtttcctgattgcaccatag 31786404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 35511376 - 35511244
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  |||||||| ||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  35511376 taagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 35511277  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||||||| |||||||||    
T  35511276 cttttttaaaaaagtcagtttcctgactgcacc 35511244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 39573092 - 39573213
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  39573092 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 39573191  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||||||||    
T  39573192 ctttttcaaaaaagtcagtttc 39573213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 15992434 - 15992302
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  15992434 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagattaaaattaa 15992335  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||  |||||||||    
T  15992334 ctttttcaaaaaagtcagtttcatgactgcacc 15992302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 22255463 - 22255591
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  | |||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  22255463 taagtccaagatgttgcaagccttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 22255562  T
Q  117 cttttttaaaaaagtcagtttcccgactg 145  Q
    |||||| |||||||||||||||| |||||    
T  22255563 ctttttaaaaaaagtcagtttcctgactg 22255591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 8437246 - 8437376
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||| | ||||||||||||||||||||       |||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  8437246 taagtccaagatgttgaaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaatattaaaatcaaaattaa 8437345  T
Q  117 cttttttaaaaaagtcagtttcccgactgca 147  Q
    |||||| |||||||||||||||| |||||||    
T  8437346 ctttttcaaaaaagtcagtttcctgactgca 8437376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 31705508 - 31705374
Alignment:
Q  20 tataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || ||||||    
T  31705508 tataagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaatt 31705409  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||| ||||  |||||||||    
T  31705408 aactttttcaaaaaagtcaatttcttgactgcacc 31705374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 43254182 - 43254272
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||    
T  43254182 attaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcaatttcctgactgcaccatag 43254272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 36867043 - 36867175
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    |||||||||||||||||| |||||||| |||||||||||  |||||||||       ||||||||||||||||||||||| |||||||||||| ||||||    
T  36867043 taagtccaagatgttgcaaacattactggatgaattact--attaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaatt 36867140  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||| ||| | |||||||||    
T  36867141 aacttttttaaaaaagtcaattttctgactgcacc 36867175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 35826380 - 35826268
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35826380 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 35826281  T
Q  117 cttttttaaaaaa 129  Q
    |||||| ||||||    
T  35826280 ctttttaaaaaaa 35826268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 42343002 - 42343134
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattac---tca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  ||||||||||||||||||   | |  |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  42343002 taagtctaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 42343101  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| | |||||||||||||  |||||||||    
T  42343102 ctttttcagaaaagtcagtttcatgactgcacc 42343134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 7693497 - 7693623
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || |||    
T  7693497 acttgtaagtctaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaa 7693596  T
Q  112 attaacttttttaaaaaagtcagtttc 138  Q
    ||||||||||||| |||||||||||||    
T  7693597 attaacttttttagaaaagtcagtttc 7693623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 27318376 - 27318246
Alignment:
Q  29 aagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaattt-aaaaatgaatcaaacattaagatcaaaattaacttttt 122  Q
    ||||||||||| ||||||||| ||||||||||       ||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27318376 aagatgttgcaaacattactatatgaattactattgatcattaatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaattaacttttt 27318277  T
Q  123 taaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||||||||| | |||||||||||||    
T  27318276 taaaaaagtcagttttctgactgcaccatag 27318246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 22019899 - 22020036
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| |||||| ||||||||| |  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| |||||||| |||    
T  22019899 acttgtaagtctaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagattaaa 22019998  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||| |||||||||||||||  |||||||||    
T  22019999 attaactttttcaaaaaagtcagtttcatgactgcacc 22020036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 36860705 - 36860837
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  |||||||| ||||||||||  |||||||||       |||||||||||||||||||||||||| ||||||||| ||||||    
T  36860705 taagtccaagatgttgcaagcattactaaatgaattact--attaatcatgaattagtaatcaacaatttaaaaatgaatcaagcattaagattaaaatt 36860802  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||| ||| | |||||||||    
T  36860803 aacttttttaaaaaagtcaattttctgactgcacc 36860837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 2888339 - 2888207
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||| ||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  2888339 taagtccaagatgttacaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 2888240  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||| ||| | |||||||||    
T  2888239 ctttttcaaaaaagtcaattttctgactgcacc 2888207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 33908514 - 33908633
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||| |||||||       ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  33908514 taagtccaagatgttgcaagcattactagat-aattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 33908612  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||| ||||||||||||||    
T  33908613 ctttttcaaaaaagtcagttt 33908633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 8741733 - 8741646
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacca 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||  ||||||||||    
T  8741733 attaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtctgtttcatgactgcacca 8741646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 19120141 - 19120272
Alignment:
Q  23 aagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    ||||| |||||||||||  |||||||||||||||||||       |||||||| | |||||||||||||||||||||||| ||||||||| |||||||||    
T  19120141 aagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtgatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 19120240  T
Q  118 ttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||| |||||||||||||||  |||||||||    
T  19120241 tttttcaaaaaagtcagtttcatgactgcacc 19120272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 23116078 - 23115992
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||| ||||    
T  23116078 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcattttcctgacttcacc 23115992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 25889655 - 25889781
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    |||||||||||| |  |||||||||||||||||||       |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25889655 tccaagatgttgaaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaacttt 25889754  T
Q  121 tttaaaaaagtcagtttcccgactgca 147  Q
    |  | |||||||||||||| |||||||    
T  25889755 tccagaaaagtcagtttcctgactgca 25889781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 28416450 - 28416313
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  ||||||| |||||||||||       ||||||||  ||||||||||||||||| ||||||||||||||||| |||    
T  28416450 acttttaagtccaagatgttgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaagaatcaaacattaagattaaa 28416351  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||| ||||||||||| |||  |||||||||    
T  28416350 attaactttttcaaaaaagtcagcttcatgactgcacc 28416313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 35504646 - 35504767
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||   ||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |    
T  35504646 taagtccaagatgttgcaagtattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattga 35504745  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||| ||||    
T  35504746 ctttttcaaaaaagtcaatttc 35504767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 40133666 - 40133798
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  ||||||| |||||||||||  |||||||||       ||||||||||||||||||||||| |||||||||||| ||||||    
T  40133666 taagtccaagatgttgcaagcattactggatgaattact--attaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaatt 40133763  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||| ||| | |||||||||    
T  40133764 aactttttcaaaaaagtcaattttctgactgcacc 40133798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 5837837 - 5837969
Alignment:
Q  23 aagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    |||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| |||||| || |||||||||    
T  5837837 aagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaaaattaaaattaac 5837936  T
Q  118 ttttttaaaaaagtcagtttcccgactgcacca 150  Q
     |||| ||||||||||||||   ||||||||||    
T  5837937 cttttcaaaaaagtcagtttgatgactgcacca 5837969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 25669857 - 25669989
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| || ||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  25669857 taagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 25669956  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||||||||  |||||||||    
T  25669957 ctttttcaaaaaaatcagtttcatgactgcacc 25669989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 27330585 - 27330717
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||    
T  27330585 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaa 27330684  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| ||| |||||| ||||  |||||||||    
T  27330685 ctttttcaaacaagtcaatttcatgactgcacc 27330717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 7208712 - 7208637
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  7208712 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaactttttaaaaaaagtcagtttc 7208637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 14409240 - 14409103
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactcaattaatcatta-------atcaacaatttaaaaatgaatcaaacattaagatca 109  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||  ||| |||||||       |||||||||||||||||||||| |||||||| || |    
T  14409240 acttgtaagtccaagatgttgcaaacattactaaatgaattact--attgatcattattcagcaatcaacaatttaaaaatgaatcgaacattaaaatta 14409143  T
Q  110 aaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||| ||||| |||||| ||||||||| |||||||||    
T  14409142 aaattaaatttttcaaaaaaatcagtttcctgactgcacc 14409103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 17157930 - 17157804
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  ||||||||||||||||| |       |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  17157930 acttttaagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaa 17157831  T
Q  112 attaacttttttaaaaaagtcagtttc 138  Q
     || ||||||| |||||||||| ||||    
T  17157830 cttgactttttcaaaaaagtcaatttc 17157804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 43308554 - 43308420
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||| |||||||| | ||| |||||||||||    
T  43308554 taagtcgaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaacgaatcaaatactaaaatcaaaattaa 43308455  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccat 151  Q
    |||||| ||||||||||||||||  ||||||||||    
T  43308454 ctttttcaaaaaagtcagtttcctaactgcaccat 43308420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 9200503 - 9200637
Alignment:
Q  20 tataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    |||||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||  |||| || ||||||    
T  9200503 tataagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaaatttaaaattaaaatt 9200602  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    || ||||| |||||| ||||||||  |||||||||    
T  9200603 aattttttcaaaaaaatcagtttcatgactgcacc 9200637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 26269136 - 26269222
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||| | |||||||||||||  |||||||||    
T  26269136 attaatcagtaatcaacaatttaaaaatgaaccaatcattaagattaaaattaactttttcataaaagtcagtttcatgactgcacc 26269222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 5830173 - 5830278
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatg-aatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  5830173 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaatta 5830272  T
Q  116 actttt 121  Q
    ||||||    
T  5830273 actttt 5830278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 35934177 - 35934298
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||| ||||||| |       |||||||| ||||||||||||||||||||| ||||||||||| || ||||||||    
T  35934177 taagtccaagatgttgcaagcattactagttgaattattattgatcattaatcagtaatcaacaatttaaaaatgattcaaacattaaaattaaaattaa 35934276  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||| ||||||||    
T  35934277 ctttttcaaaaaaatcagtttc 35934298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 25500820 - 25500688
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||| ||||       |||||||| |||| |||||||||||||||||||||| | |||||| ||||||||    
T  25500820 taagtctaagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatttaaaaatgaatcaaatactaagattaaaattaa 25500721  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||||||||  |||||||||    
T  25500720 ctttttcaaaaaaatcagtttcatgactgcacc 25500688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 30969172 - 30969096
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaa-aaaagtcagtttc 138  Q
    |||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  30969172 attaatcagtaatccacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttaaaaaaagtcagtttc 30969096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 14919387 - 14919312
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    ||||||||  |||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  14919387 attaatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaagtcagtttc 14919312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 32563467 - 32563542
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    ||||||||  ||| |||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  32563467 attaatcagcaattaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaagtcagtttc 32563542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 8467007 - 8467127
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||| ||||||||  |||||||||||||||||||       |||||| | ||||||||| ||||||||||||||||||||||| |  ||||||||    
T  8467007 taagtccaaaatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaaacattaaaaataaaattaa 8467106  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||| |||||| |||||||    
T  8467107 ctttttaaaaaaaatcagttt 8467127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 15724815 - 15724890
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| |||||| | ||||||    
T  15724815 attaatcaataatcaacaatttaaaaatgaatcaaacattaaagttaaaattaactttttcaaaaaaattagtttc 15724890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 21088656 - 21088542
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactcaattaatcattaatcaa----caatttaaaaatgaatcaaacattaagatcaaaattaa-cttt 120  Q
    |||||||||||| |  |||||||||||||||||||  ||||||||| ||| ||    ||||||||||||||||||||||||||||| ||| ||||  |||    
T  21088656 tccaagatgttgtaagcattactagatgaattact--attaatcatgaataaataatcaatttaaaaatgaatcaaacattaagattaaagttaattttt 21088559  T
Q  121 tttaaaaaagtcagttt 137  Q
    ||| |||||||||||||    
T  21088558 ttttaaaaagtcagttt 21088542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 13956254 - 13956126
Alignment:
Q  24 agtccaagatgttgcagacattactagatgaattact-----caattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaact 118  Q
    ||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||  || |   ||||||||||| ||||||||||||     
T  13956254 agtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt--aactttttcaaacattaaaatcaaaattaaca 13956157  T
Q  119 tttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||| |||||| |||| || | |||||||||    
T  13956156 ttttcaaaaaaatcagctttctgactgcacc 13956126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 34853895 - 34853853
Alignment:
Q  111 aattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  34853895 aattaacttttccaaaaaagtcagtttcccgactgcaccatag 34853853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 1429056 - 1429003
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca 77  Q
    ||||||||||||||||||  |||||||||||||||||||  ||| |||||||||||    
T  1429056 taagtccaagatgttgcaagcattactagatgaattact--attgatcattaatca 1429003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 30254700 - 30254832
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  30254700 taagtccaagatgttgcaagcattactagatgaattactattgattattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 30254799  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||||||| |||||||||    
T  30254800 cttttttaaaaaagtcagtttcctgactgcacc 30254832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 32216332 - 32216464
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||| |||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32216332 taagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 32216431  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||||| | |||||||||    
T  32216432 cttttttaaaaaagtcagttttctgactgcacc 32216464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 21289871 - 21289997
Alignment:
Q  16 cacttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaa 110  Q
    |||||||||||||||||||||||| |||||||||||||||||| |       |||||||| |||||||||||||||||||||||||||||||||||||||    
T  21289871 cacttataagtccaagatgttgcaaacattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaa 21289970  T
Q  111 aattaacttttttaaaaaagtcagttt 137  Q
    |||||| |||| |||||||||||||||    
T  21289971 aattaatttttctaaaaaagtcagttt 21289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 2960025 - 2960157
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  2960025 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 2960124  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||||||||| |||||||||    
T  2960125 ctttttcaaaaaaatcagtttcctgactgcacc 2960157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 10923004 - 10923140
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||| ||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10923004 taagtccaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 10923103  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||| ||||||||| | |||||||||||||    
T  10923104 ctttttcaaaagagtcagttttctgactgcaccatag 10923140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 34012281 - 34012149
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  |||||||| ||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  34012281 taagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 34012182  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||||||| |||||||||    
T  34012181 cttttttaaaaaagtcagtttcctgactgcacc 34012149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 28564682 - 28564560
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  28564682 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 28564583  T
Q  117 cttttttaaaaaagtcagtttcc 139  Q
    |||||| |||||||||| |||||    
T  28564582 ctttttcaaaaaagtcaatttcc 28564560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 23999624 - 23999761
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  23999624 taagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 23999723  T
Q  116 acttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||||||| |||| ||||| |||||||||||||    
T  23999724 acttttttaaaaaggtcaatttcctgactgcaccatag 23999761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 11742267 - 11742131
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  11742267 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 11742168  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||| ||||||||  |||||| ||||||    
T  11742167 ctttttcaaaaaaatcagtttcatgactgcgccatag 11742131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 14758309 - 14758441
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  14758309 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaa 14758408  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||  |||||||||    
T  14758409 ctttttcaaaaaagtcagtttcgtgactgcacc 14758441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 32267314 - 32267443
Alignment:
Q  25 gtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactt 119  Q
    |||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  32267314 gtccaagatgttgcaagcattactagatgaattactattgaacattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaattt 32267413  T
Q  120 ttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||| |||||||||| ||||| |||||||||    
T  32267414 tttcaaaaaagtcaatttcctgactgcacc 32267443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 37451562 - 37451683
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  37451562 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaa 37451661  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||| ||||    
T  37451662 ctttttcaaaaaagtcaatttc 37451683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 46931686 - 46931819
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  46931686 taagtccaagatgttgcaagcattactagatgaatatattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 46931785  T
Q  116 acttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||| ||||||||||||||||  ||||||||    
T  46931786 actttttcaaaaaagtcagtttccttactgcacc 46931819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 1547548 - 1547669
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattac---tca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||||||   | |  |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  1547548 taagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 1547647  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
     ||||| |||||||||||||||    
T  1547648 ttttttcaaaaaagtcagtttc 1547669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 10181906 - 10181770
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||| ||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  10181906 taagtccaaaatgttgcaagcattactagatgaattactattgaacattaatcaacaatcaacaatttaaaaatgaatcaaacattaagatcataattaa 10181807  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||  |||||||| ||||||| |||||||||||||    
T  10181806 cttttccaaaaaagttagtttcctgactgcaccatag 10181770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 39393665 - 39393782
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    |||||||||||||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||||    
T  39393665 tccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaataaaacattaaaattaaaattaacttt 39393764  T
Q  121 tttaaaaaagtcagtttc 138  Q
    ||||||||||||| ||||    
T  39393765 tttaaaaaagtcaatttc 39393782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 19899668 - 19899536
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  19899668 taagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 19899569  T
Q  116 acttttttaaaaaagtcagtttcccgactgcac 148  Q
    ||||||  ||||||||||||||||  |||||||    
T  19899568 acttttccaaaaaagtcagtttcctaactgcac 19899536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 27267099 - 27266964
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactc-----aattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||      ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  27267099 taagtctaagatgttgcaagcattactagatgaattactattgataattaatcaataatcaataatttaaaaatgaattaaacattaagatcaaaattaa 27267000  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    | ||||  ||||||||||||||| || ||||||||||    
T  27266999 c-ttttccaaaaagtcagtttcctgaatgcaccatag 27266964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 27532880 - 27532749
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  27532880 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatt-aaaaatgaatcaaacattaagattaaaattaa 27532782  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||||||||  |||||||||    
T  27532781 ctttttcaaaaaaatcagtttcatgactgcacc 27532749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 27563804 - 27563668
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||   |||||||||||||||| |       |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  27563804 taagtccaagatgttgcaagtattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaaagaatcaaacattaagatcataattaa 27563705  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||  |||||| ||||||||| |||||||||||||    
T  27563704 cttttccaaaaaaatcagtttcctgactgcaccatag 27563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 38823491 - 38823623
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| || ||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||| |||| |||||||| ||||||||    
T  38823491 taagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaacaaatattaagattaaaattaa 38823590  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||||||  |||||||||    
T  38823591 cttttttaaaaaagtcagtttcatgactgcacc 38823623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 48353819 - 48353951
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||| |||||  ||||||||||||||||| |       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  48353819 taagtccaagatattgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 48353918  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||||||||  |||||||||    
T  48353919 ctttttcaaaaaaatcagtttcatgactgcacc 48353951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 16415923 - 16416042
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||| |||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16415923 taagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 16416022  T
Q  117 cttttttaaaaaagtcagtt 136  Q
     |||| ||||||||| ||||    
T  16416023 tttttctaaaaaagttagtt 16416042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 8222405 - 8222525
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattac--tca--attaatcattaatcaacaatttaaaaatgaa-tcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||   | |  |||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  8222405 taagtccaagatgttgcaagcattactagatgaattatattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaa 8222504  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||| ||||||||||||||    
T  8222505 ctttttcaaaaaagtcagttt 8222525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 3535200 - 3535321
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||||||||||||||||| |||| |||    
T  3535200 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcaaacattaagattaaaactaa 3535299  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||| ||||||||    
T  3535300 ctttttaaaaaaaatcagtttc 3535321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 7078962 - 7078841
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| ||||| ||||| ||||||||||||||||||||       |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  7078962 taagtctaagatattgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaaaattaa 7078863  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||| ||||||||    
T  7078862 ctttttcaaaaaaatcagtttc 7078841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 15168373 - 15168505
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  ||||| |||||||||||||       ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  15168373 taagtacaagatgttgcaagcattattagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaa 15168472  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| |||||||||  ||||||||    
T  15168473 ctttttcaaaaaaatcagtttcctaactgcacc 15168505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 47279466 - 47279578
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| |||||| |||||||||||||       |||||| | |||||||||||||||||||||||||||||||||||| ||||||||    
T  47279466 taagtccaagatgttgcaaacattattagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 47279565  T
Q  117 cttttttaaaaaa 129  Q
    |||||| ||||||    
T  47279566 ctttttcaaaaaa 47279578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 27763163 - 27763081
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactg 145  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||| |||||    
T  27763163 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaatgtcaatttcctgactg 27763081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 28769930 - 28770052
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||| ||||||||||||||       |||||| | ||||||||||||||||||||||||||||||||| || ||||||||    
T  28769930 taagtccaagatgttgcaaacattgctagatgaattactattgatcattaattaataatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 28770029  T
Q  117 cttttttaaaaaagtcagtttcc 139  Q
    |||||| |||||| ||| |||||    
T  28770030 ctttttcaaaaaaatcaatttcc 28770052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 48620916 - 48620998
Alignment:
Q  67 atcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| | |||||||||||||  |||||||||    
T  48620916 atcattaatcaacaattttaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttcatgactgcacc 48620998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 4330553 - 4330690
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattac---tca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||| ||||||||  ||||||||||||||||||   | |  |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  4330553 acttgtaagtccaatatgttgcaagcattactagatgaattacaattgatcattaatcagtaatcaacaatataaaaatgaatcaaacattaagatcaaa 4330652  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||| ||||  |||||| ||||||  | |||||||||    
T  4330653 attaatttttccaaaaaaatcagttgtctgactgcacc 4330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 9902953 - 9902837
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||| ||||  || ||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  9902953 taagtccaagatgctgcaagcactactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaa 9902854  T
Q  117 cttttttaaaaaagtca 133  Q
    |||||| ||||||||||    
T  9902853 ctttttcaaaaaagtca 9902837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 31621402 - 31621326
Alignment:
Q  63 attaatcattaatcaacaatttaaaaa-tgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  31621402 attaatcatcaatcaacaatttaaaaaatgaatcgaacattaagatcaaaattaactttttcaaaaaagtcagtttc 31621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 47682389 - 47682257
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    ||||||||||||||  |||||||| ||||||||||       |||||||| |||| ||||||||||||| |||| |||||||||||| |||||||||||     
T  47682389 tccaagatgttgcaagcattactaaatgaattactattgatcattaatcagtaattaacaatttaaaaaagaattaaacattaagattaaaattaacttg 47682290  T
Q  121 tttaaaaaagtcagtttcccgactgcaccatag 153  Q
    || |||||||||||||| | |||||||||||||    
T  47682289 ttcaaaaaagtcagtttactgactgcaccatag 47682257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 15752352 - 15752438
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||| ||| ||| | |||||||||    
T  15752352 attaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttttaaaaaatcaattttctgactgcacc 15752438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 238412 - 238300
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca-------acaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  |||||||||||||||||||  ||||||||| |||||       |||||||||||||||||||||||||||||| |||||     
T  238412 taagtccaagatgttgcaagcattactagatgaattact--attaatcatgaatcagtaatccacaatttaaaaatgaatcaaacattaagattaaaatc 238315  T
Q  115 aacttttttaaaaaa 129  Q
    |||||||| ||||||    
T  238314 aactttttcaaaaaa 238300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 15383214 - 15383339
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaa-tcaaacattaagatcaaaattaactt 119  Q
    ||||||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  15383214 tccaagatgttgcaagcattactagatgaattactattgattattaatcagcaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaattaactt 15383313  T
Q  120 ttttaaaaaagtcagtttcccgactg 145  Q
    ||| |||||| ||| ||||| |||||    
T  15383314 tttcaaaaaaatcaatttcctgactg 15383339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 18422928 - 18423006
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaacaatttaaaaatgaatcaaacatt 102  Q
    ||||||||||||||||||  |||| ||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  18422928 taagtccaagatgttgcaagcattgctagatgaattact--attgatcattaatcaacaatttaaaaatgaatcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 22170988 - 22171108
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| ||||||||||| |||||| ||||| |||||||       |||||| | ||||||||||||||||||| ||||||||||||| |||||||||||    
T  22170988 taagtctaagatgttgcaaacattattagataaattactattgatcattaattagtaatcaacaatttaaaaataaatcaaacattaaaatcaaaattaa 22171087  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||| |||||| |||||||    
T  22171088 ctttttcaaaaaaatcagttt 22171108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 27227384 - 27227280
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||| |||||||||||||| ||||||||| |||||||||||    
T  27227384 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaccatttaaaaatgaattaaacattaatatcaaaattaa 27227285  T
Q  117 ctttt 121  Q
    |||||    
T  27227284 ctttt 27227280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 51129136 - 51129255
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||  ||||| ||  |||||||    
T  51129136 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagtattaaaat--aaattaa 51129233  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||| ||||    
T  51129234 ctttttcaaaaaagtcaatttc 51129255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 31962939 - 31963015
Alignment:
Q  63 attaatcattaatcaacaattt-aaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||  ||||||||||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  31962939 attaatcggtaatcaacaattttaaaaataaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttc 31963015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 42721313 - 42721425
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||   |||||||||| |||||||       |||||| | ||||||| ||||||||||||||||||||||||| |||| ||||||    
T  42721313 taagtccaagatgttgcaattattactagattaattactattgatcattaatgagtaatcaataatttaaaaatgaatcaaacattaaaatcataattaa 42721412  T
Q  117 cttttttaaaaaa 129  Q
    |||||||||||||    
T  42721413 cttttttaaaaaa 42721425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 25160909 - 25161016
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatg-aatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||| ||||||||||       |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  25160909 taagtccaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacattaaaatcaaaatta 25161008  T
Q  116 actttttt 123  Q
    || |||||    
T  25161009 accttttt 25161016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 1359788 - 1359703
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||   |||||| || |||||||||| | |||||||||    
T  1359788 attaatcagtaatcaacaatttaaaaatgaatcaaacattaagatc-aaattttttttttttaacaagtcagttttctgactgcacc 1359703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 3309430 - 3309536
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaaga-tcaaaatta 115  Q
    |||||||||||| |||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||| ||| | |||||||    
T  3309430 taagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatttagatttaaaatta 3309529  T
Q  116 acttttt 122  Q
    |||||||    
T  3309530 acttttt 3309536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 33725465 - 33725380
Alignment:
Q  63 attaatcattaatcaacaatttaaaaa-tgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgca 147  Q
    ||||||||  ||||||||||| ||||| |||||| ||||||||||||||||| |||||||| |||||| ||||||||| |||||||    
T  33725465 attaatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaactttttcaaaaaaatcagtttcctgactgca 33725380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 30326851 - 30326751
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatg-aatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||||||       || ||||| |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  30326851 taagtccaagatgttgcaagcattactagatgaattactattgatcatcaatcagtaatcaacaatttaaaaatgaaatcaaatattaaaatcaaaatta 30326752  T
Q  116 a 116  Q
    |    
T  30326751 a 30326751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 40885090 - 40885207
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcatt-------aatcaacaatttaaaaatgaatcaaacattaagatcaaaa-t 113  Q
    |||||||||||||||||| ||||||||||||||||||||  ||| ||||||       |||||| |||| ||||||||||| || |||||| | |||| |    
T  40885090 taagtccaagatgttgcaaacattactagatgaattact--attgatcattaattagcaatcaataattcaaaaatgaatcgaatattaaggttaaaagt 40885187  T
Q  114 taacttttttaaaaaagtca 133  Q
    |||| |||||||||||||||    
T  40885188 taacatttttaaaaaagtca 40885207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 38759846 - 38759903
Alignment:
Q  96 aaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||||||||||||||||||||| |||||||||||||    |||||||||||||    
T  38759846 aaacattaagatcaaaattaactttttcaaaaaagtcagttaattgactgcaccatag 38759903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 37618800 - 37618705
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattact-----caattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||||| |     | |||||||| ||||||||||||||||    | ||||||||||| |||||||||||    
T  37618800 taagtccaagatgttgcaagcattactagatgaattagtattgaccattaatcaataatcaacaatttaaa----attcaaacattaaaatcaaaattaa 37618705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 41926479 - 41926553
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    |||||| | |||||||  |||||||| ||||||||||||||| |||| |||||| ||||  |||||| |||||||    
T  41926479 attaattaataatcaatgatttaaaattgaatcaaacattaaaatcataattaatttttaaaaaaaaatcagttt 41926553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 18797583 - 18797718
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18797583 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 18797682  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccata 152  Q
    ||||||||||||||||||||| | ||||||| ||||    
T  18797683 cttttttaaaaaagtcagttttctgactgcatcata 18797718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 37703403 - 37703267
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||       |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  37703403 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaa 37703304  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||| ||| | |||||||||||||    
T  37703303 ctttttcaaaaaagtcaatttactgactgcaccatag 37703267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 9355736 - 9355595
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  |||||||||||||||| ||       |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  9355736 acttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaa 9355637  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||||| |||||||||||||||| | |||||||||||    
T  9355636 attaactttttcaaaaaagtcagtttcctgcctgcaccatag 9355595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 31578969 - 31578833
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||    
T  31578969 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaataatttaaaaatgaatcaaacaataaaatcaaaattaa 31578870  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||||||||| |||||||||||||    
T  31578869 ctttttcaaaaaagtcagtttcctgactgcaccatag 31578833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 24211995 - 24212130
Alignment:
Q  20 tataagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaat 113  Q
    ||||||||||||||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  24211995 tataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaat 24212094  T
Q  114 taacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||| |||||||||||||||| |||||||||    
T  24212095 taactttttcaaaaaagtcagtttcctgactgcacc 24212130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 26587997 - 26587876
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||| |||||||||||||||||||       |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  26587997 taagtccaagatgttgcaggcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaa 26587898  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||||||||    
T  26587897 ctttttcaaaaaagtcagtttc 26587876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 35353364 - 35353496
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||| |||       ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  35353364 taagtccaagatgttgcaagcattactagatgaatcactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaa 35353463  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||| |||||||||    
T  35353464 ctttttcaaaaaagtcagtttcctgactgcacc 35353496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 29173778 - 29173908
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       || ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  29173778 taagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 29173877  T
Q  117 cttttttaaaaaagtcagtttcccgactgca 147  Q
    |||||| |||||||||||||| | |||||||    
T  29173878 ctttttcaaaaaagtcagttttctgactgca 29173908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 7335053 - 7335185
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactcaattaatcattaatca-------acaatttaaaaatgaatcaaacattaagatcaaaattaact 118  Q
    ||||||||||||||  |||||||||||||||||||  |||||||||||||||       | ||||||||||||||||||||||||||||||||||||| |    
T  7335053 tccaagatgttgcaagcattactagatgaattact--attaatcattaatcagaaatcaataatttaaaaatgaatcaaacattaagatcaaaattaatt 7335150  T
Q  119 tttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||| |||||||||| ||||| |||||||||||||    
T  7335151 ttttcaaaaaagtcaatttcctgactgcaccatag 7335185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 31520646 - 31520510
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatc-------aacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  ||||||| |||||||||||  ||| ||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  31520646 taagtccaagatgttgcaagcattactcgatgaattact--attgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataatt 31520549  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||| ||||||||||||||||  ||||||||||||    
T  31520548 aactttttcaaaaaagtcagtttcctaactgcaccatag 31520510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 32432708 - 32432840
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    |||||||||| |||||||  ||||||||||||||||| |  |||||||||       |||||||||||||||||||||||||||||||||||| |||| |    
T  32432708 taagtccaaggtgttgcaagcattactagatgaattatt--attaatcatgaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaagt 32432805  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||||||||| |||||||||    
T  32432806 aacttttttaaaaaagtcagtttcctgactgcacc 32432840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 46481034 - 46480905
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| ||||||||||| ||||||||||||||||||||       |||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||    
T  46481034 taagtctaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaataaaacattaagatcataattaa 46480935  T
Q  117 cttttttaaaaaagtcagtttcccgactgc 146  Q
    |||||| |||||||||||||||| ||||||    
T  46480934 ctttttcaaaaaagtcagtttcctgactgc 46480905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 44411445 - 44411310
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattact-----caattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||||| |     | |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  44411445 taagtccaagatgttgcaagcattactagatgaattaatattgaccattaatcagtaatcaacaatttaaaaatgaatgaaacattaagatcataattaa 44411346  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccata 152  Q
    | |||  |||||||| ||||||| ||||||||||||    
T  44411345 cctttccaaaaaagttagtttcctgactgcaccata 44411310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 15612664 - 15612532
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  ||||||||||||||||| |       |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  15612664 taagtctaagatgttgcaagcattactagatgaattattgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaa 15612565  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||  |||||||||    
T  15612564 ctttttaaaaaaagtcagtttcatgactgcacc 15612532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 30055783 - 30055915
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| | |||| |||||||||||    
T  30055783 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 30055882  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||| | |||||||||| ||||| |||||||||    
T  30055883 ctttatcaaaaaagtcaatttcctgactgcacc 30055915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 23111497 - 23111568
Alignment:
Q  66 aatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23111497 aatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaagttaacttttttaaaaaagtcagttt 23111568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 6546821 - 6546907
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  6546821 attaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcacc 6546907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 38258881 - 38258967
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| | |||||||||    
T  38258881 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagttttctgactgcacc 38258967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 8861541 - 8861662
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||| ||||       |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||    
T  8861541 taagtctaagatgttgcatgcattactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacactaagattaaaattaa 8861640  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||||||||    
T  8861641 ctttttcaaaaaagtcagtttc 8861662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 32820958 - 32820846
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcatt-------aatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    |||||| |||||||||||  |||||||||||||||||||  ||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  32820958 taagtctaagatgttgcaagcattactagatgaattact--attaatcattcatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 32820861  T
Q  115 aacttttttaaaaaa 129  Q
    |||||||| ||||||    
T  32820860 aactttttaaaaaaa 32820846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 17842489 - 17842357
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||| |||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  17842489 taagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 17842390  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||  |||||||||| ||||  |||||||||    
T  17842389 cttttccaaaaaagtcaatttcttgactgcacc 17842357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 25691449 - 25691337
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||| |||||||| ||||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  25691449 taagttcaaaatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 25691350  T
Q  117 cttttttaaaaaa 129  Q
     ||||||||||||    
T  25691349 attttttaaaaaa 25691337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 37110130 - 37110262
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  37110130 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaa 37110229  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||  |||||| ||| ||||  |||||||||    
T  37110230 cttttccaaaaaaatcaatttcttgactgcacc 37110262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 48928202 - 48928086
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||       ||||||||  |||||||||||||||||| |||| |||||| |||||||||||||    
T  48928202 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaataaatcgaacatttagatcaaaattaa 48928103  T
Q  117 cttttttaaaaaagtca 133  Q
     ||||||||||||||||    
T  48928102 tttttttaaaaaagtca 48928086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 10359073 - 10358998
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  10359073 attaatcaataatcaacaatttaaaaatgaatcaaacattatgatcaaaattaactttttcaaaaaagttagtttc 10358998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 10481861 - 10481996
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaa-----ttaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||   ||||||||||||||||||        ||||||| |||| |||||||||||||| ||| ||| |||||||||||||||||    
T  10481861 taagtccaagatgttgcaagtattactagatgaattactattgatcgttaatcagtaattaacaatttaaaaataaattaaatattaagatcaaaattaa 10481960  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccata 152  Q
    |||||| |||||||||||||| | ||||||||||||    
T  10481961 ctttttcaaaaaagtcagttttctgactgcaccata 10481996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 11071459 - 11071558
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  11071459 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaaaatcataattaa 11071558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 21991933 - 21992004
Alignment:
Q  67 atcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  21991933 atcattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaaccttttcaaaaaagtcagtttc 21992004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 37347277 - 37347399
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatc-------aacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    |||||||||||| |||||  ||||||| |||||||||||  ||| ||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  37347277 taagtccaagatattgcaagcattactcgatgaattact--attgatcattaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataatt 37347374  T
Q  115 aacttttttaaaaaagtcagtttcc 139  Q
    |||||||| ||||||||||||||||    
T  37347375 aactttttcaaaaaagtcagtttcc 37347399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 26980608 - 26980694
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||  |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  26980608 attaatcggtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaagtcagtttcatgactgcacc 26980694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 12390554 - 12390422
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca-------acaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  |||||||||||||||||||  ||| |||||||||||       ||||||||||||||||  |||||||||||||||||||    
T  12390554 taagtccaagatgttgcaaccattactagatgaattact--atttatcattaatcagtaattgacaatttaaaaatgaaataaacattaagatcaaaatt 12390457  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||  |||||||||| ||||| |||| ||||    
T  12390456 aacttttccaaaaaagtcaatttcctgacttcacc 12390422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 15672664 - 15672532
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||| ||||||||  |||||||||||||||||||  ||| |||||       ||||||||||||||||||||||| |||||||||| | ||||||    
T  15672664 taagtccaaaatgttgcaagcattactagatgaattact--attgatcatgcatcaataatcaacaatttaaaaatgaattaaacattaaggttaaaatt 15672567  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    || ||||| |||||||||||||||| |||||||||    
T  15672566 aattttttcaaaaaagtcagtttcctgactgcacc 15672532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 22687487 - 22687599
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||| |||||||||||||       |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  22687487 taagtccaagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcatacattaagattaaaattaa 22687586  T
Q  117 cttttttaaaaaa 129  Q
    |||||| ||||||    
T  22687587 ctttttcaaaaaa 22687599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 43925354 - 43925456
Alignment:
Q  25 gtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    |||||||||||||||  |||||||||||||||||||  |||||||||       |||||||||||||||||||||||||||||||||||| |||||||||    
T  43925354 gtccaagatgttgcaagcattactagatgaattact--attaatcatgaatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaac 43925451  T
Q  118 ttttt 122  Q
    |||||    
T  43925452 ttttt 43925456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 41764937 - 41764851
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||  ||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||| |||||||||| ||||    
T  41764937 attaatcagcaatcaacaatttaaaaatgaaccgaacattaagatcaaaattaaccttttcaaaaaagtcaatttcccgactccacc 41764851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 37704438 - 37704573
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||| ||||||||||||       |||||| | |||||||||||||| |||||||||||||||||| ||||| ||||     
T  37704438 taagtccaagatgttgcaagcattaccagatgaattactattgatcattaattagtaatcaacaatttacaaatgaatcaaacattaaaatcaagattag 37704537  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccata 152  Q
     ||||  |||||||||| ||||| ||||||||||||    
T  37704538 tttttccaaaaaagtcaatttcctgactgcaccata 37704573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 27284000 - 27284134
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaa-tcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||| ||||||||||| || ||||||||||| ||||||||||    
T  27284000 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaataaaatcaaacattaaaatcaaaatta 27284099  T
Q  116 a-cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    | |||||  |||||||||| ||||| |||||||||    
T  27284100 atcttttcaaaaaaagtcaatttcctgactgcacc 27284134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 4583175 - 4583291
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca-------acaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||| ||||||||||||  ||||||| |||||||||||  ||||||||| |||||       ||||||||||||||||| |||||||||||| ||||||    
T  4583175 taagttcaagatgttgcaagcattactggatgaattact--attaatcatgaatcagtcatcaacaatttaaaaatgaattaaacattaagattaaaatt 4583272  T
Q  115 aacttttttaaaaaagtca 133  Q
    |||||||| ||||||||||    
T  4583273 aactttttcaaaaaagtca 4583291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 12166215 - 12166275
Alignment:
Q  87 aaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgca 147  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||    
T  12166215 aaatgaatcaaacattaagattaaaattaacttttttagaaaagtcagtttcatgactgca 12166275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 32593111 - 32592996
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||| || | |||||||||| |||||||       ||||||||  |||||||||||||||| |||||  ||||||||||||||||||||    
T  32593111 taagtccaagatgttacaaatattactagataaattactatggatcattaatcagcaatcaacaatttaaaa-tgaattgaacattaagatcaaaattaa 32593013  T
Q  117 cttttttaaaaaagtca 133  Q
    |||||| ||||||||||    
T  32593012 ctttttcaaaaaagtca 32592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 34362083 - 34361967
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacatt-aaga-tcaaaatt 114  Q
    |||||||||||| ||||| ||||||||||||||||||||       |||||||| | || |||||||||||||||||||||||||| |||| | ||||||    
T  34362083 taagtccaagatattgcaaacattactagatgaattacttttgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaatt 34361984  T
Q  115 aacttttttaaaaaagt 131  Q
    |||||||| ||||||||    
T  34361983 aactttttcaaaaaagt 34361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 5657386 - 5657264
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaa-gatcaaaatta 115  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||| | ||||||| ||||||||||||||| || |||||| ||| |||||||    
T  5657386 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatgagtaatcaaaaatttaaaaatgaataaatcattaaagattaaaatta 5657287  T
Q  116 acttttttaaaaaagtcagtttc 138  Q
    ||||||| ||||| |||||||||    
T  5657286 actttttcaaaaatgtcagtttc 5657264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 33688118 - 33688066
Alignment:
Q  96 aaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcac 148  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||||||||    
T  33688118 aaacattaaaattaaaattaacttttttaaaaaagtcagtttcacgactgcac 33688066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 44598978 - 44599054
Alignment:
Q  72 taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||| ||||| |||||| ||||||||  |||||||||    
T  44598978 taatcaacaatttaaaa-tgaatcaatcgttaagattaaaattaattttttcaaaaaaatcagtttcatgactgcacc 44599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 12165999 - 12166074
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattact-----caattaatcattaatcaacaatttaaaaatga 92  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||    
T  12165999 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 37970429 - 37970293
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  37970429 taagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 37970330  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||| ||||| |||||||||||||    
T  37970329 ctttttcaaaaaagtcactttcctgactgcaccatag 37970293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 43643505 - 43643369
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  43643505 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaa 43643406  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||||||| | |||||||||||||    
T  43643405 ctttttcaaaaaagtcagttttctgactgcaccatag 43643369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 5299856 - 5299720
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  5299856 taagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaattaa 5299757  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||||||||  |||||||||||||    
T  5299756 ctttttcaaaaaagtcagtttcatgactgcaccatag 5299720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 16446785 - 16446653
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||| |||||||| |||||||||||    
T  16446785 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatctaacattaaaatcaaaattaa 16446686  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||| |||||||||    
T  16446685 ctttttcaaaaaagtcagtttcctgactgcacc 16446653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 31933801 - 31933660
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| |||||| ||||| |||||||||||||||||||||||| |       |||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  31933801 acttgtaagtctaagatattgcagacattactagatgaattattattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatattaagatcaaa 31933702  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||    
T  31933701 attaattttttcaaaaaagtcagtttcccaactgcaccatag 31933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 35459621 - 35459501
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||| |||||||| ||||||||||||||||||||       ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  35459621 taagtccaaaatgttgcaaacattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 35459522  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||| ||||||||||||||    
T  35459521 ctttttcaaaaaagtcagttt 35459501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 35859260 - 35859346
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  35859260 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcacc 35859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 1149542 - 1149410
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  1149542 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 1149443  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
     ||||| |||||||||| ||||| |||||||||    
T  1149442 ttttttcaaaaaagtcaatttcctgactgcacc 1149410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 34895242 - 34895374
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  |||||||| ||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  34895242 taagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 34895341  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||| |||||  ||||||||    
T  34895342 cttttttaaaaaagtcaatttcctaactgcacc 34895374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 38644258 - 38644390
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||    
T  38644258 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaaaatttaaaaataaatcaaacattaagattaaaattaa 38644357  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||  |||||||||    
T  38644358 ctttttcaaaaaagtcagtttcatgactgcacc 38644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 23854341 - 23854207
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  23854341 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 23854242  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccata 152  Q
    |||||| |||||| ||| ||||| |||| |||||||    
T  23854241 ctttttcaaaaaa-tcaatttcctgactacaccata 23854207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 41362748 - 41362838
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  41362748 attaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttcaaaaaagtcagtttcctgactgcaccatag 41362838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 4132596 - 4132460
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaat-------caacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  |||||||||||||||||||  ||| |||||||||       ||||||||||||||||||| | |||||||||||||||||    
T  4132596 taagtccaagatgttgcaagcattactagatgaattact--attgatcattaatttgtaatcaacaatttaaaaatgaattacacattaagatcaaaatt 4132499  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||  |||||||||||||| | |||||||||||||    
T  4132498 aacttttccaaaaaagtcagtttgctgactgcaccatag 4132460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 7890867 - 7890746
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| || ||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  7890867 taagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaa 7890768  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||||||||    
T  7890767 ctttttcaaaaaagtcagtttc 7890746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 466112 - 466244
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  466112 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 466211  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||| || |||||| ||||||||  |||||||||    
T  466212 cttattcaaaaaaatcagtttcatgactgcacc 466244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 27082748 - 27082636
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  27082748 taagtccaagatgttgcaagcattactagatgaattactacttatcattaatcaataatcaacaatttaaaaatgaattaaacattaagatcaaaattaa 27082649  T
Q  117 cttttttaaaaaa 129  Q
    |||||| ||||||    
T  27082648 ctttttcaaaaaa 27082636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 10555114 - 10554978
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaa----tcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    |||||||||||| |||||  |||||||||||||||||| | ||| ||||||||    | ||||||||||||||||||||||||||||||||||||||||     
T  10555114 taagtccaagatattgcaagcattactagatgaattacactattgatcattaagtaataaacaatttaaaaatgaatcaaacattaagatcaaaattaat 10555015  T
Q  118 tttttt-aaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||| ||| | ||| |||||||||    
T  10555014 ttttttcaaaaaagtcaattttctgaccgcaccatag 10554978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 1953852 - 1953766
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||||    
T  1953852 attaatcaataatcaacaattttaaaatgaatcaaacattaagatcaaaattaattttttcaaaaaaatcagtttcctgactgcacc 1953766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 8803680 - 8803594
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||    
T  8803680 attaatcagtaatgaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcaatttcctgactgcacc 8803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 24823304 - 24823194
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  24823304 taagtccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaa 24823205  T
Q  117 cttttttaaaa 127  Q
    |||||||||||    
T  24823204 cttttttaaaa 24823194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 44869776 - 44869898
Alignment:
Q  21 ataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||| |||||  |||||||||||||||||||       |||||||| ||| ||||||||||||||||||||||||||||| || |||||||    
T  44869776 ataagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaaccaacaatttaaaaatgaatcaaacattaaaattaaaatta 44869875  T
Q  116 acttttttaaaaaagtcagtttc 138  Q
    ||||||| |||||||||||||||    
T  44869876 actttttcaaaaaagtcagtttc 44869898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 1205207 - 1205323
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||   ||||||||||||||||||       |||||||| |||||| ||||||||||||||||||||||  ||||||||||||||    
T  1205207 taagtccaagatgttgcaagtattactagatgaattactattgatcattaatcactaatcagcaatttaaaaatgaatcaaacaacaagatcaaaattaa 1205306  T
Q  117 cttttttaaaaaagtca 133  Q
    |||||||||||||||||    
T  1205307 cttttttaaaaaagtca 1205323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 33906492 - 33906621
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaac-----aatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||  ||| ||||||||||| |     |||||||||||||||| || | |||||||||||||||    
T  33906492 taagtccaagatgttgcaagcattactagatgaattact--attgatcattaatcagcaatcaaatttaaaaatgaatcgaatagtaagatcaaaattaa 33906589  T
Q  117 cttttttaaaaaagtcagtttcccgactgcac 148  Q
    |||||| |||||||||||||| | ||||||||    
T  33906590 ctttttcaaaaaagtcagttttctgactgcac 33906621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 12587862 - 12587981
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| ||||| |||||  |||||||||||||||||||       |||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  12587862 taagtcaaagattttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaattaa 12587961  T
Q  117 cttttttaaaaaagtcagtt 136  Q
     ||||| |||||||||||||    
T  12587962 ttttttcaaaaaagtcagtt 12587981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 34951921 - 34951846
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||    
T  34951921 attaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttc 34951846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 11727304 - 11727437
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||  |||||||| ||||||||    
T  11727304 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaa 11727403  T
Q  117 cttttttaaaaaa-gtcagtttcccgactgcacc 149  Q
    ||||||||||||| |||| ||||  |||||||||    
T  11727404 cttttttaaaaaatgtcaatttcatgactgcacc 11727437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 16223143 - 16223282
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  16223143 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 16223242  T
Q  117 ---cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
        |||||| ||||||||||||| | ||||| |||||||    
T  16223243 ttttttttttcaaaaagtcagttttctgactggaccatag 16223282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 36051062 - 36050997
Alignment:
Q  152 aggagaatgctaaaacaagtgatattaacactactctcgttttgtttgggacatgaatatattctt 217  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  36051062 aggagaatgctaaaacaagtgttattaacactagtctcgttttgtttgggacatgaatatattctt 36050997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 6098428 - 6098320
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  |||||||||||||||||||       |||||| | ||||||||||||||||||||||||||||||||||||||      
T  6098428 acttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcatg 6098329  T
Q  112 attaacttt 120  Q
    |||||||||    
T  6098328 attaacttt 6098320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 12876390 - 12876512
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||| ||| |||||||||||||||||||  ||| |||||       ||||||||| ||| ||||| ||||||||||||| || |||| |    
T  12876390 taagtccaagatgttacaggcattactagatgaattact--atttatcatgaataagtaatcaacagtttgaaaataaatcaaacattaaaattaaaagt 12876487  T
Q  115 aacttttttaaaaaagtcagtttcc 139  Q
    |||||||||||||||||||||||||    
T  12876488 aacttttttaaaaaagtcagtttcc 12876512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 33198128 - 33198203
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||||| ||||    
T  33198128 attaatcaataatcaacaatttaaaaatgaatcaatcattaagattaagattaactttttcaaaaaagtcaatttc 33198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 40862699 - 40862822
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaa-atgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||||||       || ||||| ||||| ||||||||||| ||||||||||||||||||| |||| ||    
T  40862699 taagtccaagatgttgcaagcattactagatgaattactatttgtcataaatcagtaatcgacaatttaaaaaatgaatcaaacattaagattaaaagta 40862798  T
Q  116 acttttttaaaaaagtcagtttcc 139  Q
    ||||||| |||||||||| |||||    
T  40862799 actttttcaaaaaagtcaatttcc 40862822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 30654446 - 30654361
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||| |||||||||||| ||||||||| ||||| ||||||||||||||||| |||||| ||||||||| |||||||||    
T  30654446 attaatcagtaattaacaatttaaaa-tgaatcaaatattaaaatcaaaattaactttttcaaaaaaatcagtttcctgactgcacc 30654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 18259414 - 18259495
Alignment:
Q  72 taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||||||||||||||||||||| |||||| || ||||||||| |||| |||||||||| ||||  |||||||||||||    
T  18259414 taatcaacaatttaaaaatgaatcaatcattaaaattaaaattaaccttttcaaaaaagtcaatttcatgactgcaccatag 18259495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 39099029 - 39098908
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||| ||||||||  |||||||||||||||||||       |||||| | ||||||| |||||||||||| |||||||||||| || ||||||||    
T  39099029 taagtccaaaatgttgcaagcattactagatgaattactattgatcattaattaataatcaataatttaaaaatgcatcaaacattaaaattaaaattaa 39098930  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
     |||||||||||| ||||||||    
T  39098929 tttttttaaaaaaatcagtttc 39098908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 43026011 - 43026066
Alignment:
Q  74 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaa 129  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||| |||||    
T  43026011 atcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttttcaaaaa 43026066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 36694821 - 36694755
Alignment:
Q  72 taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    ||||||| ||||||||||| ||||||||||||| || |||| ||||||||| |||||| ||||||||    
T  36694821 taatcaataatttaaaaataaatcaaacattaaaattaaaagtaactttttcaaaaaaatcagtttc 36694755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 13307931 - 13307995
Alignment:
Q  89 atgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||| ||||  || ||||||||||    
T  13307931 atgaatcaaacattaagattaaaattaactttttcaaaatagtcaatttcatgattgcaccatag 13307995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 41910895 - 41910852
Alignment:
Q  90 tgaatcaaacattaagatcaaaattaacttttttaaaaaagtca 133  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  41910895 tgaatcaaacattcagattaaaattaacttttttaaaaaagtca 41910852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 9864533 - 9864583
Alignment:
Q  99 cattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||| |||||||||||||| ||||||||||||||||  ||||||||    
T  9864533 cattaagattaaaattaactttttcaaaaaagtcagtttcctaactgcacc 9864583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 1149835 - 1149756
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattact-----caattaatcattaatcaacaatttaaaaatg 91  Q
    |||| |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||    
T  1149835 acttgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 6091085 - 6090953
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6091085 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 6090986  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||| ||||| | |||||||||    
T  6090985 cttttttaaaaaagtaagttttctgactgcacc 6090953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 8513509 - 8513634
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 121  Q
    ||||||||| || |||||  |||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  8513509 taagtccaaaatcttgcaagcattactagatgaattact--attgatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttt 8513606  T
Q  122 ttaaaaaagtcagtttcccgactgcacc 149  Q
    | |||||||||||||||  |||||||||    
T  8513607 tcaaaaaagtcagtttcatgactgcacc 8513634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 3879847 - 3879710
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  |||||||||||||||||||       || ||||| |||||||||||||||||||||||||||||||||||| |||    
T  3879847 acttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaa 3879748  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||| |||||| ||||||||| |||||||||    
T  3879747 attaactttttcaaaaaaatcagtttcctgactgcacc 3879710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 7054676 - 7054543
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    |||||||||||||||||| ||||||||| ||||||    || | |  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  7054676 taagtccaagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaagatgaatcaaacattaaaatcaaaatta 7054577  T
Q  116 acttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||| |||||||||||||||  |||||||||    
T  7054576 actttttcaaaaaagtcagtttcttgactgcacc 7054543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 33892915 - 33892794
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||| ||||||||||       |||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  33892915 taagtccaagatgttgcaaacattactaaatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaggttaaaattaa 33892816  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||||||||    
T  33892815 ctttttcaaaaaagtcagtttc 33892794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 1946162 - 1946249
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttt-aaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  1946162 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttttcaaaaaagtcagtttcctgactgcacc 1946249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 20768363 - 20768495
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||| |||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  20768363 taagtccaaggtgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattgaacattaagatcaaaattaa 20768462  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||| ||||| |||||||||    
T  20768463 ctttttcaaaaaaatcaatttcctgactgcacc 20768495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 5627719 - 5627805
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||| |||||||||    
T  5627719 attaatcagtaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaatttttttaaaaaaatcagtttcctgactgcacc 5627805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 29182440 - 29182563
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    |||| |||||| |||||||||||   |||||||||||||||||| |  ||||||||  ||||||||||||||||||||||||| ||||||||  ||||||    
T  29182440 acttgtaagtctaagatgttgcaagtattactagatgaattactgatcattaatcaacaatcaacaatttaaaaatgaatcaatcattaagactaaaatt 29182539  T
Q  115 aacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||| ||||||    
T  29182540 aactttttcaaaaaagttagtttc 29182563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 6089184 - 6089282
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 121  Q
    ||||||||| ||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  6089184 taagtccaaaatgttgcaagcattactatatgaattact--attgatcattaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaattttt 6089281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 7234938 - 7234803
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaacaa----------tttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||          ||||||||| |||| |||||||||||||||    
T  7234938 taagtccaagatgttgcaaacattactagatgaattact--attgatcattaatcaacaacaatcaacaatttaaaaataaatcgaacattaagatcaaa 7234841  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||| |||||| ||| ||||| |||| ||||    
T  7234840 attaactttttcaaaaaaatcattttcctgactacacc 7234803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 4318724 - 4318626
Alignment:
Q  23 aagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||  |||||||||||||||||||       |||||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  4318724 aagtccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaataaatcaaacattaaaattaaaattaa 4318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 33619170 - 33619236
Alignment:
Q  73 aatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcc 139  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||    
T  33619170 aatcaacaatttaaaaatgaatcgaacattaagattaaaattaactttttaaaaaaagtcaatttcc 33619236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 33724116 - 33724062
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33724116 attaatcattaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 21017014 - 21016913
Alignment:
Q  29 aagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 121  Q
    |||||||||||  |||||||||||||||||||  |||||||||       |||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  21017014 aagatgttgcaagcattactagatgaattact--attaatcatgaatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaactttt 21016917  T
Q  122 ttaa 125  Q
    ||||    
T  21016916 ttaa 21016913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 19440578 - 19440446
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||    
T  19440578 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaattaatcaaacattaagatcaaaattaa 19440479  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||||||| |||||||||    
T  19440478 cttttttaaaaaagtcagtttcctgactgcacc 19440446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 25184394 - 25184530
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  25184394 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacattaagatcaaaattaa 25184493  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||||||| | |||||||||||||    
T  25184494 ctttttcaaaaaagtcagttttctgactgcaccatag 25184530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 33816446 - 33816316
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||       ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  33816446 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaa 33816347  T
Q  117 cttttttaaaaaagtcagtttcccgactgca 147  Q
    |||||| |||||||||||||||| |||||||    
T  33816346 ctttttcaaaaaagtcagtttcctgactgca 33816316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 34361424 - 34361289
Alignment:
Q  20 tataagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaat 113  Q
    ||||||||||||||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  34361424 tataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaat 34361325  T
Q  114 taacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||| |||||||||||||||| |||||||||    
T  34361324 taactttttcaaaaaagtcagtttcctgactgcacc 34361289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 28002916 - 28002786
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||  ||||||||||||||||||||       ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  28002916 taagtccaagatgttgctaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacattaagatcaaaattaa 28002817  T
Q  117 cttttttaaaaaagtcagtttcccgactgca 147  Q
    |||||| |||||||||||||||| |||||||    
T  28002816 ctttttcaaaaaagtcagtttcctgactgca 28002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 879478 - 879342
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||||| |       |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  879478 taagtccaagatgttgcaagcattactagatgaattattattgatcattaataagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 879379  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||| ||||||||||||| | |||| ||||||||    
T  879378 ctttttttaaaaagtcagttttctgactacaccatag 879342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 6864316 - 6864448
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  6864316 taagttcaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 6864415  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||| | |||||||||    
T  6864416 ctttttcaaaaaagtcagttttctgactgcacc 6864448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 7703790 - 7703922
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  7703790 taagtcgaagatgttgcaagcattactagatgaattactatttatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 7703889  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||  |||||||||    
T  7703890 ctttttcaaaaaagtcagtttcatgactgcacc 7703922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 1815586 - 1815693
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattac---tca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    |||||||||||||| |||||||||||||||||||   | |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1815586 tccaagatgttgcaaacattactagatgaattacaattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 1815685  T
Q  121 tttaaaaa 128  Q
    ||||||||    
T  1815686 tttaaaaa 1815693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 55241035 - 55240914
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| |||||||||||| |||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  55241035 taagtccaagatgttgcaaacattactagataaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 55240936  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
     ||||| |||||||||||||||    
T  55240935 atttttcaaaaaagtcagtttc 55240914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 32579727 - 32579847
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||       ||||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  32579727 taagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcaaacattaagatcaaaattaa 32579826  T
Q  117 cttttttaaaaaagtcagttt 137  Q
     ||||| ||||||||||||||    
T  32579827 ttttttcaaaaaagtcagttt 32579847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 37775939 - 37776071
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  37775939 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattgaaattaa 37776038  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||| ||||  |||||||||    
T  37776039 cttttttaaaaaagtcaatttcatgactgcacc 37776071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 23761350 - 23761473
Alignment:
Q  20 tataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||||  ||||||||||||||||| |       |||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  23761350 tataagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaataatttaaaaatgaatcaaacattaagattaaaatt 23761449  T
Q  115 aacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||||||||||    
T  23761450 aactttttcaaaaaagtcagtttc 23761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 26896415 - 26896501
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  26896415 attaatcagtaatcaacaatttaaaaatgaatcgaacattaaaatcaaaattaacttttttaaaaaagtcaatttcctgactgcacc 26896501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 33341679 - 33341797
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||| |  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  33341679 taagtccaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 33341778  T
Q  117 cttttttaaaaaagtcagt 135  Q
     ||||||||||||||||||    
T  33341779 tttttttaaaaaagtcagt 33341797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 49376294 - 49376380
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  49376294 attaatcagtaatcaagaatttaaaaatgaattaaacattaagatcaaaattaactttttcaaaaaagtcagtttcctgactgcacc 49376380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 50765001 - 50765115
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  50765001 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 50765100  T
Q  117 cttttttaaaaaagt 131  Q
    |||||||||||||||    
T  50765101 cttttttaaaaaagt 50765115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 32912510 - 32912377
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| |||||||| |    
T  32912510 taagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatga 32912411  T
Q  116 acttttttaaaaaagtcagtttcccgactgcacc 149  Q
    | ||||| |||||||||||||||| |||||||||    
T  32912410 attttttcaaaaaagtcagtttcctgactgcacc 32912377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 3042900 - 3043032
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||| ||||||||  ||||||||||||||||| |       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  3042900 taagtccaacatgttgcaagcattactagatgaattagtattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 3042999  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||| ||||  |||||||||    
T  3043000 ctttttcaaaaaagtcaatttcttgactgcacc 3043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 19089383 - 19089251
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| | |||| |||||||||||    
T  19089383 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 19089284  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||| | |||||||||| ||||| |||||||||    
T  19089283 ctttatcaaaaaagtcaatttcctgactgcacc 19089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 27396895 - 27397016
Alignment:
Q  20 tataagtccaagatgttgcagacattactagatgaattactcaattaatcat-----taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||| ||||||||  |||||||||||||||||||  ||| |||||     |||||||||||||||||||||||||||||||||||| ||||||    
T  27396895 tataagtccaaaatgttgcaagcattactagatgaattact--attgatcattaatgtaatcaacaatttaaaaatgaatcaaacattaagattaaaatt 27396992  T
Q  115 aacttttttaaaaaagtcagtttc 138  Q
    ||||||||| ||||| ||||||||    
T  27396993 aactttttttaaaaaatcagtttc 27397016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 35020965 - 35020841
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaat---------taatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaa 112  Q
    |||||||||||| ||||| ||||||||||||||||||||  ||         |||||  |||||||||||||||||||||||||||||||||||||||||    
T  35020965 taagtccaagatattgcaaacattactagatgaattactatatattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacattaagatcaaaa 35020866  T
Q  113 ttaacttttttaaaaaagtcagttt 137  Q
    ||||||||||||||| |||||||||    
T  35020865 ttaacttttttaaaagagtcagttt 35020841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 37663671 - 37663543
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| | |||| |||||||||||    
T  37663671 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 37663572  T
Q  117 cttttttaaaaaagtcagtttcccgactg 145  Q
    |||| |||||||||||| ||||| |||||    
T  37663571 ctttattaaaaaagtcaatttcctgactg 37663543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 46888084 - 46887956
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    ||||||||||| ||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  46888084 tccaagatgttacaagcattactagatgaattactattgatcattaatcactaatcaacaatttaaaaatgaatcaaatattaaaatcaaaattaacttt 46887985  T
Q  121 tttaaaaaagtcagtttcccgactgcacc 149  Q
    || |||||||||||||||| || ||||||    
T  46887984 ttcaaaaaagtcagtttcctgattgcacc 46887956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 47254022 - 47254141
Alignment:
Q  23 aagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    ||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  47254022 aagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 47254121  T
Q  118 ttttttaaaaaagtcagttt 137  Q
    ||||| ||||||||||||||    
T  47254122 tttttcaaaaaagtcagttt 47254141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 36493573 - 36493483
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  36493573 attaatccgtaattaacaatttaaaaatgaatcaaacattaagatcataattaactttttcaaaaaagtcaatttcctgactgcaccatag 36493483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 39400289 - 39400410
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  ||||||||||||||| |||       ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  39400289 taagttcaagatgttgcaagcattactagatgaatgactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 39400388  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| |||||||||||||||    
T  39400389 ctttttcaaaaaagtcagtttc 39400410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 7152134 - 7152014
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||| |||||  ||||| |||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| |||| |||    
T  7152134 taagtccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatgaaaaataa 7152035  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||| ||||||||||||||    
T  7152034 ctttttcaaaaaagtcagttt 7152014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 9139510 - 9139639
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaa-----caatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||| ||||||||  ||| ||||||||||||      |||||||||||||||||||||||||||||| ||||||    
T  9139510 taagtccaagatgttgcaagcattactagacgaattact--attgatcattaatcaataatctaatttaaaaatgaatcaaacattaagatcataattaa 9139607  T
Q  117 cttttttaaaaaagtcagtttcccgactgcac 148  Q
    |||||  ||||||||||||||||  |||||||    
T  9139608 cttttccaaaaaagtcagtttcctcactgcac 9139639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 29584130 - 29583998
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||    
T  29584130 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaattaa 29584031  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| ||| |||||| ||||  |||||||||    
T  29584030 ctttttcaaacaagtcaatttcatgactgcacc 29583998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 23431836 - 23431967
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||| |||||||||||||       |||||| | |||||||||||||||||||| |||||||||||| || ||||||||    
T  23431836 taagtccaagatgttgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaattaaaattaa 23431935  T
Q  117 cttttttaaaaaagtcagtttcccgactgcac 148  Q
    |||||| |||||||||||||||  ||||||||    
T  23431936 ctttttcaaaaaagtcagtttcatgactgcac 23431967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 55477821 - 55477715
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca-------acaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  |||||||||||||||||||  |||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  55477821 taagtccaagatgttgcaagcattactagatgaattact--attaatcattaatcagtaattaacaatttaaaaatgaatcaaacattaagatcaaaatt 55477724  T
Q  115 aactttttt 123  Q
    || ||||||    
T  55477723 aattttttt 55477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 25700940 - 25700854
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||    
T  25700940 attaatcaataatgtacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcaatttcctaactgcacc 25700854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 35025496 - 35025379
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       ||||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  35025496 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaa-atcaaaattaa 35025398  T
Q  117 cttttttaaaaaagtcagt 135  Q
    |||||| | ||||||||||    
T  35025397 ctttttcataaaagtcagt 35025379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 17272245 - 17272377
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatc-------aacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  |||||||||||||||||||  ||| ||||||||||       ||| ||||||||||||||||||||||||||| ||||||    
T  17272245 taagtccaagatgttgcaagcattactagatgaattact--attgatcattaatcggtaatgaacgatttaaaaatgaatcaaacattaagattaaaatt 17272342  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||| |||||| ||||  |||||||||    
T  17272343 aactttttcaaataagtcaatttcatgactgcacc 17272377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 30002571 - 30002450
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  30002571 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaataaacaatttaaaaatgaatcaaacattaagattaaaattaa 30002472  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
    |||||| | |||||||| ||||    
T  30002471 ctttttcagaaaagtcaatttc 30002450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 32592412 - 32592481
Alignment:
Q  64 ttaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtca 133  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  32592412 ttaatcaataatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtca 32592481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 37288009 - 37288142
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaaga-tcaaaatta 115  Q
    ||||||||||||||||||  ||||| |||||||||||||       |||||||| ||||||| ||||||||||||||||||||||||||| | |||||||    
T  37288009 taagtccaagatgttgcaagcattattagatgaattactattgagcattaatcagtaatcaataatttaaaaatgaatcaaacattaagatttaaaatta 37288108  T
Q  116 acttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||| |||||||||| ||||  |||||||||    
T  37288109 actttttcaaaaaagtcactttcatgactgcacc 37288142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 4598309 - 4598395
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||  ||||||||||||||  |||||||||    
T  4598309 attaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacattttacaaaaagtcagtttcatgactgcacc 4598395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 4205265 - 4205397
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  ||| |||||||||||||||  ||| |||||       ||||||| ||||||||||||||||||||||||| || |||| |    
T  4205265 taagtccaagatgttgcaagcatcactagatgaattact--atttatcatgaataagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagt 4205362  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||||||||  |||||||||    
T  4205363 aactttttcaaaaaagtcagtttcttgactgcacc 4205397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 38012589 - 38012674
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcac 148  Q
    ||||||||  |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| | ||||||| ||||||||    
T  38012589 attaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaaaaattagtttcctgactgcac 38012674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 50697527 - 50697644
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    |||||||||||| |  |||||||||||||||||||       |||||| | ||||||||||||||||||||||||||||||||| || |||||||| |||    
T  50697527 tccaagatgttgtaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaatttt 50697626  T
Q  121 tttaaaaaagtcagtttc 138  Q
    || |||||||||||||||    
T  50697627 ttcaaaaaagtcagtttc 50697644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 34948025 - 34947923
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaa-----ttaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||| ||||        ||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  34948025 taagtccaagatgttgcaagcattactagatgaaatactattgatcgttaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 34947926  T
Q  117 ctt 119  Q
    |||    
T  34947925 ctt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 5047836 - 5047764
Alignment:
Q  77 aacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||| |||||| |||||||||    
T  5047836 aacaatttaaaaatgaatcgaacattaaaatcaaaattaattttttcaaaaaagtctgtttcctgactgcacc 5047764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 17167994 - 17168115
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  ||| |||||||||||||||       |||||| | ||||||| ||||||||||||||||||||||||| || |||| |||    
T  17167994 taagtctaagatgttgcaagcatcactagatgaattactatttatcattaattagtaatcaataatttaaaaatgaatcaaacattaaaattaaaagtaa 17168093  T
Q  117 cttttttaaaaaagtcagtttc 138  Q
     ||||| |||||||||||||||    
T  17168094 ttttttcaaaaaagtcagtttc 17168115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 17173626 - 17173703
Alignment:
Q  72 taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||| ||||||||||||||||||||||||| || |||| ||| ||||| |||||||||||||||  |||||||||    
T  17173626 taatcaataatttaaaaatgaatcaaacattaaaattaaaagtaattttttcaaaaaagtcagtttcttgactgcacc 17173703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 4934097 - 4934022
Alignment:
Q  63 attaatcattaatcaacaattt-aaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    |||||||| ||||||| ||||| |||||| ||| |||||||||||||||||||||||| || ||||||||||||||    
T  4934097 attaatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaacttgttcaaaaaagtcagttt 4934022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 46884035 - 46883932
Alignment:
Q  31 gatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaa 125  Q
    |||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||| ||||||||||||| || |||||||| ||||| ||    
T  46884035 gatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaataaaaattaattttttcaa 46883936  T
Q  126 aaaa 129  Q
    ||||    
T  46883935 aaaa 46883932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 42200011 - 42200143
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 115  Q
    ||||||||||||||||||  |||||||||||||||    ||||    |||||||| ||||||| ||||||||||| |||||||||| || ||| ||||||    
T  42200011 taagtccaagatgttgcaagcattactagatgaatatactactgttcattaatcagtaatcaataatttaaaaattaatcaaacatcaaaatc-aaatta 42200109  T
Q  116 acttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||| ||||| |||| ||||| || ||||||    
T  42200110 actttttcaaaaaggtcaatttcctgattgcacc 42200143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 40552163 - 40552031
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||| |||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40552163 taagtccatgatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 40552064  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||| |||||||||    
T  40552063 ctttttcaaaaaagtcagtttccagactgcacc 40552031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 1089969 - 1090097
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    |||||||| |||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1089969 tccaagattttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 1090068  T
Q  121 tttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||||| |||| ||||    
T  1090069 tttaaaaaagtcagtttcctgactacacc 1090097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 4015731 - 4015863
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  4015731 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 4015830  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||  |||||||||    
T  4015831 ctttttcaaaaaagtcagtttcatgactgcacc 4015863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 46297666 - 46297546
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  46297666 taagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 46297567  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||||||||||||||||||    
T  46297566 cttttttaaaaaagtcagttt 46297546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 20373121 - 20373031
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  20373121 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccatag 20373031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 29164076 - 29164194
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||| |||||| |||||||| ||  |||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  29164076 acttgtaagtctaagatgttacaagcattactagatgaattact--attgatcattaatcaacaatttaaaaataaatcaaacattaagattaaaattaa 29164173  T
Q  117 cttttttaaaaaagtcagttt 137  Q
    |||||||| ||||||||||||    
T  29164174 cttttttagaaaagtcagttt 29164194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 11357290 - 11357166
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11357290 acttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaa 11357191  T
Q  112 attaacttttttaaaaaagtcagtt 136  Q
    ||||||||||  |||||||||||||    
T  11357190 attaacttttccaaaaaagtcagtt 11357166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 22622622 - 22622490
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  22622622 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaactatttaaaaatgaatcaaacattaaaatcaaaattaa 22622523  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||| ||||||||| |||||||||    
T  22622522 ctttttcaaaaaaatcagtttcctgactgcacc 22622490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 33378689 - 33378557
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| |||||||||||| ||||||||||||||||||||       |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  33378689 taagttcaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacgatttaaaaatgaatcaaacattaagattaaaattaa 33378590  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
     ||||| |||||||||||||||| |||||||||    
T  33378589 ttttttcaaaaaagtcagtttcctgactgcacc 33378557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 39282928 - 39283056
Alignment:
Q  26 tccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttt 120  Q
    ||||| ||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39282928 tccaaaatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttt 39283027  T
Q  121 tttaaaaaagtcagtttcccgactgcacc 149  Q
    || |||||||||||||||| |||||||||    
T  39283028 ttcaaaaaagtcagtttcctgactgcacc 39283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 21009659 - 21009573
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  21009659 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaatttttttaaaaaagtcagtttcctgactgcacc 21009573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 3362522 - 3362663
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    ||||| |||||||| ||||||||  ||||||| |||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||| |    
T  3362522 acttagaagtccaatatgttgcaagcattactggatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcata 3362621  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    ||||||||||  |||||||||| ||||| |||||||||||||    
T  3362622 attaacttttccaaaaaagtcaatttcctgactgcaccatag 3362663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 14586584 - 14586448
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||| |||||||       |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  14586584 taagtccaagatgttgcaagcattactagataaattactactgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaattaa 14586485  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
     ||||| ||||||||||||||| ||| ||||||||||    
T  14586484 ttttttcaaaaaagtcagtttcacgagtgcaccatag 14586448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 21193879 - 21194011
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  |||||||| ||||||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  21193879 taagttcaagatgttgcaaccattactaaatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 21193978  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||  |||||||||    
T  21193979 ctttttcaaaaaagtcagtttcatgactgcacc 21194011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 26941164 - 26941032
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| | |||| |||||||||||    
T  26941164 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagcgttaaaatcaaaattaa 26941065  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||| | |||||||||    
T  26941064 ctttttcaaaaaagtcagttttctgactgcacc 26941032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 48355213 - 48355349
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||   |||||||||||||||| |       |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  48355213 taagtccaagatgttgcaagtattactagatgaattattattgatcattaatcagtaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 48355312  T
Q  117 cttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||| |||||||||| |||||  ||||||||||||    
T  48355313 ctttttcaaaaaagtcaatttcctaactgcaccatag 48355349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 37157980 - 37158112
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattac---tca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||| |||| |||  ||||||||||||||||||   | |  |||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  37157980 taagtccaatatgtcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 37158079  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| |||||||||||||||| |||||||||    
T  37158080 ctttttcaaaaaagtcagtttcctgactgcacc 37158112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 44891770 - 44891889
Alignment:
Q  23 aagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    ||||| |||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  44891770 aagtctaagatgttgcaagcattactagatgaattactgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaac 44891869  T
Q  118 ttttttaaaaaagtcagttt 137  Q
    ||||||||||||||||||||    
T  44891870 ttttttaaaaaagtcagttt 44891889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 37203386 - 37203472
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  37203386 attaatgagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcacc 37203472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 52040826 - 52040707
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaat---tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||||||||||||||| ||||||||||||||||   || | |  |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  52040826 taagtccaagatgttgcaaacattactagatgaatgattattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 52040727  T
Q  117 cttttttaaaaaagtcagtt 136  Q
    |||||  |||||||||||||    
T  52040726 cttttccaaaaaagtcagtt 52040707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 2008259 - 2008332
Alignment:
Q  65 taatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  2008259 taatcattaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcaaaaaagtcagtttc 2008332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 42505979 - 42505847
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| | |||| |||||||||||    
T  42505979 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 42505880  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||| | |||||||||| ||||| |||||||||    
T  42505879 ctttatcaaaaaagtcaatttcctgactgcacc 42505847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 53229056 - 53228924
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||| ||||||||||||  ||||||||||||||||| |       |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  53229056 taagttcaagatgttgcaagcattactagatgaattagtattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 53228957  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||  |||||| |||||| || |||||||||    
T  53228956 cttttccaaaaaaatcagttgcctgactgcacc 53228924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 54506076 - 54506212
Alignment:
Q  19 ttataagtccaagatgttgcagacattactagatgaat----tactca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaa 112  Q
    |||||||||||| ||||||||  |||||||||||||||    || | |  |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  54506076 ttataagtccaaaatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaa 54506175  T
Q  113 ttaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||||| |||||| ||| ||||| |||||||||    
T  54506176 ttaactttttcaaaaaaatcaatttcctgactgcacc 54506212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 22445923 - 22445833
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||| |||||||| ||||    
T  22445923 attaatcagtaatcaacaatttaaatatgaatcaaacattaagatcataattaacttttccaaaaaagtcagtttcctgactgcactatag 22445833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 29099618 - 29099751
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattac---tca--attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||||||   | |  ||||||||  |||||||||||||||||||||||||||||||| || ||||||||    
T  29099618 taagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaatattaaaattaa 29099717  T
Q  117 cttttt-taaaaaagtcagtttcccgactgcacc 149  Q
    ||||||  |||||||||||||||  |||||||||    
T  29099718 ctttttcaaaaaaagtcagtttcatgactgcacc 29099751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 11357016 - 11356930
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  | |||||||||    
T  11357016 attaattagtaatcaacaatttaaaaatgaatccaacattaagatcaaaattaactttttcaaaaaagtcagttgtctgactgcacc 11356930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 11467115 - 11467202
Alignment:
Q  48 tagatgaattactcaattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  11467115 tagatgaattact--attgatcattaatcaacaatttaaaaatgaatcaatcattaagaataaaattaactttttcaaaaaagtcagttt 11467202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 47481841 - 47481923
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactg 145  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||| |||||    
T  47481841 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcaatttcctgactg 47481923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 4761554 - 4761438
Alignment:
Q  20 tataagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca-------acaatttaaaaatgaatcaaacattaagatcaaaa 112  Q
    ||||||||||| |||||||| ||||||| ||||||||||||  |||||||||||||||       ||||||| ||||||||||||||||||| |||||||    
T  4761554 tataagtccaaaatgttgcaaacattaccagatgaattact--attaatcattaatcagaaatcaacaatttgaaaatgaatcaaacattaaaatcaaaa 4761457  T
Q  113 ttaacttttttaaaaaagt 131  Q
    |||||||||| ||||||||    
T  4761456 ttaactttttaaaaaaagt 4761438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 7327391 - 7327274
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||  |||||||| |||    
T  7327391 acttgtaagtctaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaa 7327292  T
Q  112 attaacttttttaaaaaa 129  Q
    ||||||||||||||||||    
T  7327291 attaacttttttaaaaaa 7327274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 33698471 - 33698546
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||| |||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||||    
T  33698471 attaatcagtaatcaacaatttaaaaatgaatcagtcattaagattaaaattaactttttcaaaaaagtcagtttc 33698546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 36012410 - 36012544
Alignment:
Q  21 ataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaa-tt 114  Q
    |||||||||| ||| ||||  |||||||||||||||||||       |||||||| ||||||||||||||||||| ||||||||||||| || |||| ||    
T  36012410 ataagtccaaaatgctgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaattaaaattt 36012509  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||||||||||||||  |||||||||    
T  36012510 aactttttcaaaaaagtcagtttcatgactgcacc 36012544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 43975801 - 43975664
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| |||||||||||| |||||  ||||||||||||||||| |       ||||||||  ||||||||||||||||||||||| ||||||||||||||     
T  43975801 acttgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaag 43975702  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||| ||||| |||| ||||||||| | |||||||||    
T  43975701 attaattttttcaaaagagtcagttttctgactgcacc 43975664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 24707973 - 24707890
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgc 146  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||| ||| | ||||||    
T  24707973 attaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaaaaatcaattttctgactgc 24707890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 22451240 - 22451350
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  ||||||||||||||||| |       ||||||||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  22451240 taagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagcaatcaaaaatttaaaaatgaatcgaacattaagatcaaaattaa 22451339  T
Q  117 cttttttaaaa 127  Q
    |||||| ||||    
T  22451340 ctttttcaaaa 22451350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 51212675 - 51212545
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaat-------caacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||||||||||||||||  |||||||||||||||||||  ||| |||||||||       ||||||||||||||||||      |||||||||||||||    
T  51212675 taagtccaagatgttgcaagcattactagatgaattact--attgatcattaattaaaaatcaacaatttaaaaatgaa------attaagatcaaaatt 51212584  T
Q  115 aacttttttaaaaaagtcagtttcccgactgcaccatag 153  Q
    |||||||| ||||| |||||||| | |||||||||||||    
T  51212583 aactttttcaaaaatgtcagttttctgactgcaccatag 51212545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 44186421 - 44186316
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  ||||||||||| |||||||       |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  44186421 taagtctaagatgttgcaagcattactagataaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 44186322  T
Q  117 cttttt 122  Q
    | ||||    
T  44186321 catttt 44186316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 25580067 - 25580142
Alignment:
Q  73 aatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcac 148  Q
    ||||||||||||||||||||| ||| ||||||||| || |||||||||||||||||||||| ||||  ||||||||    
T  25580067 aatcaacaatttaaaaatgaaccaatcattaagattaagattaacttttttaaaaaagtcaatttcaagactgcac 25580142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 3655108 - 3654983
Alignment:
Q  20 tataagtccaagatgttgcagacattactagat--gaattactca-----attaatcattaatcaacaatttaaaaatgaa-tcaaacattaagatcaaa 111  Q
    ||||||||||||||||||||  |||||||||||  ||||||||       |||||||| ||||||||||||||||||| || ||||||||||| ||||||    
T  3655108 tataagtccaagatgttgcaagcattactagatatgaattactattgattattaatcagtaatcaacaatttaaaaataaaatcaaacattaaaatcaaa 3655009  T
Q  112 attaacttttttaaaaaagtcagttt 137  Q
    |||||| |||| |||||| |||||||    
T  3655008 attaacattttcaaaaaaatcagttt 3654983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 24488866 - 24488743
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaatt 114  Q
    ||||| ||||||||||||  |||||||||||| ||||||  |||||||||       ||||||| ||||||||||||||||||||||||| || ||||||    
T  24488866 taagttcaagatgttgcaagcattactagatgcattact--attaatcatgaatcaataatcaataatttaaaaatgaatcaaacattaatattaaaatt 24488769  T
Q  115 aacttttttaa-aaaagtcagtttcc 139  Q
    |||||||| || |||||||| |||||    
T  24488768 aactttttaaataaaagtcaatttcc 24488743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 35844577 - 35844640
Alignment:
Q  75 tcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttc 138  Q
    |||||||||||||||| ||||||||||||| || |||||||||||||| |||||||||| ||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaactttttcaaaaaagtcaatttc 35844640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 40936246 - 40936361
Alignment:
Q  23 aagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    ||||| |||||||||||  ||||||||||| |||||||       |||||||  ||||||||||||||||||| |||||| |||||||||  ||||||||    
T  40936246 aagtctaagatgttgcaagcattactagataaattactattgatcattaatcggtaatcaacaatttaaaaataaatcaatcattaagattgaaattaac 40936345  T
Q  118 ttttttaaaaaagtca 133  Q
    ||||| ||||||||||    
T  40936346 tttttcaaaaaagtca 40936361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 50475136 - 50475195
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 122  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  50475136 attaatcagtaatcaataatttaaaaatgaatcaaacattaaaatcaaaattaaattttt 50475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 32373737 - 32373869
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| |||||| |||||||||||  |||||||||||||||| ||       |||||||| ||||||||||||||||| |||||  | || |||||| |||    
T  32373737 acttgtaagtctaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaa-tgaattcatcaataagattaaa 32373835  T
Q  112 attaacttttttaaaaaagtcagtttcccgactg 145  Q
    ||||||||||| |||||| |||||||| ||||||    
T  32373836 attaactttttcaaaaaattcagtttcacgactg 32373869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 27480205 - 27480127
Alignment:
Q  74 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcaccata 152  Q
    |||||||||||||||||||||| |||||||||| ||||||||  ||||| |||||| ||| |||||   ||||||||||    
T  27480205 atcaacaatttaaaaatgaatcgaacattaagaacaaaattatatttttaaaaaaaatcaatttcctccctgcaccata 27480127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 34133207 - 34133288
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaa 98  Q
    ||||||||||||||||||  |||||||||||||||||||  | |||||||       |||||||||||||||||||||||||||    
T  34133207 taagtccaagatgttgcaagcattactagatgaattact--agtaatcatgaatcggtaatcaacaatttaaaaatgaatcaaa 34133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 34133312 - 34133362
Alignment:
Q  99 cattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||| |||||||||||||| ||||||||||||||||  ||||||||    
T  34133312 cattaagattaaaattaactttttcaaaaaagtcagtttcctaactgcacc 34133362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 38592016 - 38592051
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaa 98  Q
    |||||||| |||||||||||||||||||||||||||    
T  38592016 attaatcagtaatcaacaatttaaaaatgaatcaaa 38592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 11835537 - 11835499
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattact 60  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  11835537 taagtccaagatgttgcaaacattactaaatgaattact 11835499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 43348556 - 43348598
Alignment:
Q  87 aaatgaatcaaacattaagatcaaaattaacttttttaaaaaa 129  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||    
T  43348556 aaatgaatcaatcattaagattaaaattaactttttcaaaaaa 43348598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 45174778 - 45174816
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattact 60  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  45174778 taagtccaagatgttgcaagcattactagatgaattact 45174816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 53811638 - 53811600
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattact 60  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  53811638 taagtccaagatgttgcaggcattcctagatgaattact 53811600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 50475078 - 50475119
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaatta 58  Q
    |||| ||||||||||||||||||  |||||||||||||||||    
T  50475078 acttgtaagtccaagatgttgcaagcattactagatgaatta 50475119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 46994565 - 46994512
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca 77  Q
    |||||||||||| |||||  |||||||||||||||||||  ||| |||||||||||    
T  46994565 taagtccaagatattgcaagcattactagatgaattact--attgatcattaatca 46994512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 54828605 - 54828552
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatca 77  Q
    ||||||||||||||||||  ||||||||||| |||||||  ||| |||||||||||    
T  54828605 taagtccaagatgttgcaagcattactagataaattact--attgatcattaatca 54828552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 267566 - 267693
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactcaattaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttt 121  Q
    ||||||||||||| ||||   ||||||||||||||||  ||||    || ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  267566 taagtccaagatgctgcaagaattactagatgaattaaccaat----cagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaattttt 267661  T
Q  122 ttaaaaaagtcagtttcccgactgcaccatag 153  Q
    | |||||||||||||||  |||||||||||||    
T  267662 tcaaaaaagtcagtttcttgactgcaccatag 267693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 12190 - 12321
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    |||||| |||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||    
T  12190 taagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-aatcaaacattaagattaaaattaa 12288  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||| ||||||  |||||||||    
T  12289 cttttttaaaaaagtaagtttcatgactgcacc 12321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 8168 - 8300
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| |||||||||||||||||||||||||| | |||| |||||||||||    
T  8168 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgttaaaatcaaaattaa 8267  T
Q  117 cttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||| | |||||||||| ||||| |||||||||    
T  8268 ctttatcaaaaaagtcaatttcctgactgcacc 8300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 94009 - 93873
Alignment:
Q  17 acttataagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaa 111  Q
    |||| ||||||||||||||||||  |||||||||||||||| ||       |||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  94009 acttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcactaatcaacaatttaaaa-tgaatcaaacattaaaatcaaa 93911  T
Q  112 attaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    ||||||||||||||||| ||| ||||||  ||||||||    
T  93910 attaacttttttaaaaaggtccgtttccttactgcacc 93873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 412 - 514
Alignment:
Q  25 gtccaagatgttgcagacattactagatgaattactcaattaatcat-------taatcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 117  Q
    |||||||||||||||  |||||||||||||||||||  |||||||||       |||||||||||||||||||||||||||||||||||| |||||||||    
T  412 gtccaagatgttgcaagcattactagatgaattact--attaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaac 509  T
Q  118 ttttt 122  Q
    |||||    
T  510 ttttt 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 408333 - 408223
Alignment:
Q  22 taagtccaagatgttgcagacattactagatgaattactca-----attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  408333 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaataaaaattaa 408234  T
Q  117 cttttttaaaa 127  Q
     ||||| ||||    
T  408233 ttttttcaaaa 408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 44283 - 44357
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    |||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||    
T  44283 attaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaagtcagttt 44357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 145873 - 145787
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagtttcccgactgcacc 149  Q
    |||||||| |||| || ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||    
T  145873 attaatcagtaataaaaaatttaaaaatgaattaaacattaaaatcaaaattaactttttcaaaaaagtcaatttcctgactgcacc 145787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 154504 - 154430
Alignment:
Q  63 attaatcattaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaagtcagttt 137  Q
    |||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||    
T  154504 attaatcagtaatcaacaatttaaaaatgaattaaacattaaaatcaaaatcaactttttcaaaaaagtcagttt 154430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University