View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12943_low_8 (Length: 648)

Name: NF12943_low_8
Description: NF12943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12943_low_8
NF12943_low_8
[»] chr5 (40 HSPs)
chr5 (12-629)||(4673265-4673896)
chr5 (336-477)||(2193861-2194002)
chr5 (336-477)||(8391282-8391422)
chr5 (336-477)||(42788606-42788747)
chr5 (340-463)||(8642008-8642131)
chr5 (383-477)||(15512972-15513066)
chr5 (340-477)||(2474008-2474145)
chr5 (336-453)||(10926930-10927047)
chr5 (336-453)||(10927387-10927504)
chr5 (336-477)||(17445415-17445556)
chr5 (340-482)||(3887012-3887154)
chr5 (340-477)||(189117-189254)
chr5 (340-477)||(2474454-2474591)
chr5 (336-477)||(34372113-34372254)
chr5 (340-482)||(21886101-21886243)
chr5 (340-482)||(34371661-34371803)
chr5 (340-475)||(34867839-34867974)
chr5 (347-477)||(3886561-3886691)
chr5 (340-453)||(1821955-1822068)
chr5 (364-478)||(18304504-18304618)
chr5 (340-477)||(22556585-22556722)
chr5 (337-453)||(27646819-27646935)
chr5 (340-477)||(22557018-22557155)
chr5 (336-453)||(39146984-39147101)
chr5 (317-452)||(20039460-20039594)
chr5 (341-453)||(5066875-5066987)
chr5 (378-453)||(29680091-29680166)
chr5 (335-480)||(18750153-18750298)
chr5 (345-481)||(30684512-30684648)
chr5 (383-462)||(11757256-11757335)
chr5 (345-480)||(24182203-24182337)
chr5 (345-467)||(30719775-30719897)
chr5 (339-465)||(42429193-42429319)
chr5 (345-482)||(20858497-20858633)
chr5 (341-403)||(2058690-2058752)
chr5 (419-481)||(4102924-4102986)
chr5 (357-438)||(4657992-4658073)
chr5 (336-424)||(11160694-11160782)
chr5 (421-485)||(30720212-30720276)
chr5 (415-485)||(5785969-5786039)
[»] chr4 (56 HSPs)
chr4 (340-477)||(49998685-49998822)
chr4 (340-482)||(12691948-12692090)
chr4 (336-477)||(44471279-44471420)
chr4 (335-484)||(21220278-21220427)
chr4 (340-477)||(35871677-35871813)
chr4 (336-453)||(1645727-1645844)
chr4 (337-477)||(7678576-7678716)
chr4 (317-453)||(50398516-50398652)
chr4 (357-477)||(50814779-50814899)
chr4 (338-453)||(50398971-50399086)
chr4 (340-477)||(23350237-23350374)
chr4 (335-453)||(23942767-23942885)
chr4 (339-453)||(23943220-23943334)
chr4 (356-477)||(24628931-24629052)
chr4 (356-477)||(24629387-24629508)
chr4 (211-453)||(51331259-51331509)
chr4 (336-453)||(53996093-53996210)
chr4 (336-480)||(27026548-27026691)
chr4 (345-477)||(44470829-44470960)
chr4 (336-439)||(27029322-27029425)
chr4 (336-453)||(3169251-3169368)
chr4 (336-437)||(4127431-4127532)
chr4 (340-452)||(14351844-14351956)
chr4 (356-481)||(1464212-1464337)
chr4 (336-477)||(4127843-4127984)
chr4 (356-453)||(13613876-13613972)
chr4 (336-453)||(29628646-29628762)
chr4 (358-478)||(4185782-4185902)
chr4 (369-468)||(15306054-15306153)
chr4 (357-468)||(27578420-27578531)
chr4 (347-470)||(43928925-43929047)
chr4 (340-456)||(21067783-21067896)
chr4 (345-482)||(17029384-17029521)
chr4 (340-453)||(31817830-31817943)
chr4 (351-463)||(20306132-20306241)
chr4 (336-466)||(8467773-8467895)
chr4 (417-486)||(11828430-11828499)
chr4 (340-480)||(17628560-17628700)
chr4 (358-468)||(23091474-23091584)
chr4 (336-405)||(14572176-14572245)
chr4 (340-453)||(21067331-21067444)
chr4 (342-467)||(34554480-34554605)
chr4 (336-409)||(45682248-45682321)
chr4 (336-468)||(33764905-33765037)
chr4 (356-450)||(14571702-14571796)
chr4 (356-441)||(4186232-4186317)
chr4 (340-481)||(41869967-41870108)
chr4 (417-468)||(4127381-4127432)
chr4 (340-427)||(9423862-9423949)
chr4 (419-462)||(14571657-14571700)
chr4 (340-407)||(23976243-23976310)
chr4 (348-480)||(42838680-42838815)
chr4 (387-441)||(52048657-52048710)
chr4 (387-436)||(33294887-33294936)
chr4 (420-468)||(23976181-23976229)
chr4 (418-482)||(27578858-27578922)
[»] scaffold0168 (1 HSPs)
scaffold0168 (336-468)||(2787-2919)
[»] chr6 (44 HSPs)
chr6 (336-478)||(15929627-15929769)
chr6 (340-477)||(13492838-13492975)
chr6 (340-477)||(17027491-17027628)
chr6 (340-477)||(20850370-20850507)
chr6 (336-477)||(20896648-20896789)
chr6 (340-482)||(7912359-7912501)
chr6 (340-477)||(7911927-7912064)
chr6 (336-477)||(16520013-16520154)
chr6 (317-453)||(11062311-11062447)
chr6 (340-464)||(13191486-13191610)
chr6 (336-439)||(3652531-3652634)
chr6 (336-482)||(23986272-23986418)
chr6 (336-477)||(9352107-9352248)
chr6 (356-477)||(13492397-13492518)
chr6 (336-452)||(6330897-6331013)
chr6 (340-439)||(14771717-14771816)
chr6 (336-482)||(23776486-23776631)
chr6 (383-478)||(12194420-12194515)
chr6 (340-458)||(21312020-21312138)
chr6 (335-480)||(9440814-9440959)
chr6 (336-453)||(20126166-20126283)
chr6 (340-468)||(2681185-2681313)
chr6 (348-477)||(17731069-17731202)
chr6 (340-452)||(21311564-21311676)
chr6 (390-477)||(28780209-28780296)
chr6 (336-425)||(31821704-31821793)
chr6 (323-439)||(20735727-20735843)
chr6 (335-431)||(27334205-27334301)
chr6 (335-431)||(27394945-27395041)
chr6 (340-453)||(33774986-33775101)
chr6 (335-478)||(9440268-9440411)
chr6 (340-453)||(2720547-2720661)
chr6 (351-453)||(17851434-17851536)
chr6 (387-452)||(33470933-33470998)
chr6 (369-453)||(17850996-17851080)
chr6 (340-455)||(2890821-2890936)
chr6 (356-430)||(15929264-15929338)
chr6 (345-435)||(28583017-28583107)
chr6 (335-468)||(17205383-17205515)
chr6 (336-453)||(20732623-20732740)
chr6 (341-452)||(28065820-28065934)
chr6 (401-475)||(3885052-3885126)
chr6 (336-441)||(1991598-1991703)
chr6 (327-375)||(9441086-9441134)
[»] chr2 (36 HSPs)
chr2 (336-482)||(8256571-8256717)
chr2 (340-477)||(41754338-41754475)
chr2 (336-468)||(29804727-29804859)
chr2 (340-477)||(30966283-30966420)
chr2 (340-477)||(30966739-30966876)
chr2 (336-456)||(1707086-1707206)
chr2 (336-446)||(33175003-33175113)
chr2 (336-477)||(11388233-11388373)
chr2 (340-453)||(16379442-16379555)
chr2 (340-477)||(25337957-25338094)
chr2 (345-477)||(33771055-33771187)
chr2 (340-453)||(16378986-16379099)
chr2 (348-465)||(24818383-24818500)
chr2 (343-482)||(30961838-30961977)
chr2 (356-477)||(5399777-5399898)
chr2 (348-485)||(13191031-13191168)
chr2 (345-453)||(33174557-33174665)
chr2 (336-452)||(38898897-38899013)
chr2 (336-439)||(18098876-18098979)
chr2 (336-477)||(11394580-11394719)
chr2 (340-453)||(25434040-25434153)
chr2 (340-468)||(30963232-30963360)
chr2 (336-478)||(83062-83204)
chr2 (336-453)||(1912570-1912686)
chr2 (340-477)||(29259580-29259717)
chr2 (337-468)||(16542031-16542163)
chr2 (345-453)||(27882910-27883018)
chr2 (340-480)||(30963677-30963817)
chr2 (356-452)||(15619963-15620059)
chr2 (414-477)||(32377676-32377739)
chr2 (317-398)||(18447957-18448038)
chr2 (423-468)||(32377876-32377921)
chr2 (340-411)||(1953204-1953275)
chr2 (340-444)||(20502072-20502175)
chr2 (345-432)||(8073946-8074033)
chr2 (356-453)||(15639799-15639896)
[»] scaffold0499 (1 HSPs)
scaffold0499 (340-477)||(2011-2148)
[»] chr8 (42 HSPs)
chr8 (340-477)||(41659065-41659202)
chr8 (340-477)||(10844575-10844712)
chr8 (336-477)||(12827214-12827355)
chr8 (340-477)||(22548509-22548646)
chr8 (340-477)||(22548955-22549092)
chr8 (317-453)||(6464894-6465030)
chr8 (340-468)||(25144821-25144949)
chr8 (345-477)||(25148021-25148153)
chr8 (340-477)||(25147585-25147722)
chr8 (336-485)||(27022290-27022439)
chr8 (340-468)||(22026428-22026556)
chr8 (340-468)||(17103130-17103258)
chr8 (340-462)||(27925948-27926070)
chr8 (336-453)||(2044103-2044220)
chr8 (340-451)||(10844932-10845043)
chr8 (336-453)||(8080326-8080443)
chr8 (347-481)||(15567512-15567646)
chr8 (345-477)||(34308439-34308571)
chr8 (340-456)||(41913019-41913135)
chr8 (336-481)||(3745146-3745291)
chr8 (356-465)||(12100756-12100865)
chr8 (340-453)||(32292446-32292559)
chr8 (336-436)||(22840530-22840630)
chr8 (340-452)||(27819231-27819343)
chr8 (345-453)||(33852242-33852350)
chr8 (366-465)||(31283623-31283722)
chr8 (345-477)||(34308895-34309031)
chr8 (356-481)||(1297072-1297197)
chr8 (356-465)||(21316081-21316190)
chr8 (340-449)||(28375042-28375151)
chr8 (387-485)||(10729638-10729736)
chr8 (390-476)||(34687929-34688015)
chr8 (356-453)||(28453403-28453500)
chr8 (340-411)||(27021905-27021976)
chr8 (340-439)||(28912848-28912947)
chr8 (341-398)||(22705222-22705279)
chr8 (356-452)||(30527467-30527563)
chr8 (416-487)||(29117361-29117432)
chr8 (414-453)||(29971409-29971448)
chr8 (345-407)||(15568035-15568097)
chr8 (339-453)||(15819000-15819113)
chr8 (340-468)||(3744687-3744815)
[»] chr7 (43 HSPs)
chr7 (336-477)||(2465778-2465919)
chr7 (336-477)||(42515589-42515730)
chr7 (340-477)||(2941717-2941854)
chr7 (340-477)||(13125096-13125233)
chr7 (336-477)||(28495899-28496040)
chr7 (336-477)||(34405551-34405692)
chr7 (340-453)||(42515141-42515254)
chr7 (336-477)||(2465969-2466110)
chr7 (336-477)||(28495568-28495709)
chr7 (336-462)||(36422297-36422423)
chr7 (356-477)||(9125024-9125145)
chr7 (336-453)||(35474105-35474222)
chr7 (336-462)||(6719049-6719175)
chr7 (340-477)||(2193305-2193442)
chr7 (340-485)||(5406540-5406685)
chr7 (336-453)||(46425786-46425903)
chr7 (340-468)||(2189193-2189321)
chr7 (345-449)||(26421293-26421397)
chr7 (346-453)||(679872-679978)
chr7 (340-481)||(20966100-20966241)
chr7 (336-452)||(6747583-6747699)
chr7 (335-477)||(18833330-18833472)
chr7 (340-482)||(25182410-25182552)
chr7 (356-453)||(9623273-9623369)
chr7 (317-453)||(29039004-29039140)
chr7 (345-468)||(11372505-11372628)
chr7 (387-477)||(7646438-7646528)
chr7 (387-477)||(13122465-13122555)
chr7 (346-439)||(11517387-11517480)
chr7 (345-453)||(35527105-35527213)
chr7 (390-477)||(7646514-7646601)
chr7 (337-453)||(22529219-22529335)
chr7 (347-453)||(2611636-2611742)
chr7 (414-465)||(43776262-43776313)
chr7 (340-429)||(16192368-16192457)
chr7 (340-452)||(29357441-29357553)
chr7 (357-452)||(37672226-37672321)
chr7 (383-477)||(1628805-1628899)
chr7 (387-452)||(7461336-7461400)
chr7 (340-448)||(26421749-26421857)
chr7 (356-444)||(31406577-31406665)
chr7 (421-456)||(33316853-33316888)
chr7 (317-391)||(26957603-26957677)
[»] chr3 (46 HSPs)
chr3 (336-477)||(13150514-13150655)
chr3 (340-477)||(31284236-31284373)
chr3 (336-477)||(50347791-50347932)
chr3 (340-468)||(28561795-28561923)
chr3 (336-477)||(11179994-11180135)
chr3 (336-465)||(13150071-13150200)
chr3 (336-477)||(32227181-32227322)
chr3 (336-458)||(39640982-39641104)
chr3 (336-477)||(32227545-32227686)
chr3 (340-477)||(41472350-41472486)
chr3 (340-477)||(16811430-16811567)
chr3 (336-453)||(25238668-25238785)
chr3 (345-468)||(32386703-32386826)
chr3 (336-453)||(25230232-25230349)
chr3 (336-453)||(25237819-25237936)
chr3 (345-453)||(4067344-4067452)
chr3 (323-453)||(20885101-20885231)
chr3 (356-477)||(8067345-8067466)
chr3 (348-477)||(14814006-14814135)
chr3 (348-477)||(14820211-14820340)
chr3 (336-453)||(25230689-25230806)
chr3 (336-453)||(25238276-25238393)
chr3 (336-445)||(25239069-25239178)
chr3 (336-453)||(30529732-30529849)
chr3 (336-453)||(37045080-37045197)
chr3 (340-477)||(39653213-39653350)
chr3 (357-453)||(2911161-2911257)
chr3 (351-477)||(27187290-27187416)
chr3 (340-481)||(29224373-29224514)
chr3 (335-436)||(32796936-32797037)
chr3 (317-477)||(16810951-16811111)
chr3 (357-453)||(25248177-25248273)
chr3 (348-468)||(41474054-41474174)
chr3 (350-453)||(25802532-25802635)
chr3 (340-453)||(7493930-7494043)
chr3 (340-468)||(26309958-26310086)
chr3 (340-452)||(7477240-7477352)
chr3 (419-482)||(15377412-15377475)
chr3 (387-478)||(53150771-53150862)
chr3 (340-453)||(25802988-25803101)
chr3 (419-482)||(15388271-15388334)
chr3 (419-482)||(15392638-15392701)
chr3 (419-482)||(15405674-15405737)
chr3 (419-482)||(15417499-15417562)
chr3 (348-452)||(31103943-31104049)
chr3 (420-485)||(3899929-3899994)
[»] chr1 (43 HSPs)
chr1 (336-477)||(16451893-16452034)
chr1 (336-477)||(16461046-16461187)
chr1 (340-477)||(20054496-20054633)
chr1 (340-477)||(20054952-20055089)
chr1 (340-477)||(20055408-20055545)
chr1 (340-477)||(20055864-20056001)
chr1 (340-477)||(20056320-20056457)
chr1 (340-477)||(20057223-20057360)
chr1 (345-477)||(20056776-20056908)
chr1 (340-482)||(12883573-12883715)
chr1 (340-477)||(20054040-20054177)
chr1 (340-477)||(20057679-20057816)
chr1 (340-477)||(50002667-50002804)
chr1 (336-465)||(52250251-52250380)
chr1 (336-468)||(50002254-50002386)
chr1 (340-482)||(38340955-38341097)
chr1 (340-477)||(20845621-20845758)
chr1 (345-477)||(46693695-46693827)
chr1 (340-477)||(35759568-35759705)
chr1 (340-468)||(35760883-35761011)
chr1 (346-477)||(20060300-20060431)
chr1 (336-477)||(31822623-31822764)
chr1 (336-453)||(43057507-43057624)
chr1 (345-477)||(51372834-51372966)
chr1 (318-452)||(43057050-43057184)
chr1 (340-440)||(2328364-2328464)
chr1 (389-477)||(52250641-52250729)
chr1 (389-477)||(52250978-52251066)
chr1 (340-439)||(20061189-20061288)
chr1 (335-478)||(16907278-16907421)
chr1 (336-453)||(7548136-7548253)
chr1 (345-453)||(30872934-30873042)
chr1 (339-453)||(12728039-12728154)
chr1 (359-453)||(2634992-2635086)
chr1 (338-468)||(16440548-16440678)
chr1 (356-477)||(50003035-50003156)
chr1 (400-478)||(8278066-8278144)
chr1 (336-485)||(23180775-23180924)
chr1 (340-480)||(842890-843030)
chr1 (383-478)||(7229902-7229997)
chr1 (345-468)||(16410692-16410815)
chr1 (360-424)||(31823097-31823161)
chr1 (340-482)||(2634515-2634657)
[»] scaffold0243 (1 HSPs)
scaffold0243 (340-477)||(1269-1406)
[»] scaffold0002 (1 HSPs)
scaffold0002 (336-465)||(154802-154931)
[»] scaffold0024 (1 HSPs)
scaffold0024 (345-468)||(105774-105897)
[»] scaffold0322 (1 HSPs)
scaffold0322 (340-477)||(19015-19152)
[»] scaffold0040 (1 HSPs)
scaffold0040 (336-477)||(2170-2311)
[»] scaffold0020 (1 HSPs)
scaffold0020 (340-468)||(107432-107560)
[»] scaffold0022 (4 HSPs)
scaffold0022 (340-468)||(162647-162775)
scaffold0022 (390-477)||(163094-163181)
scaffold0022 (387-477)||(163167-163257)
scaffold0022 (345-438)||(69814-69907)
[»] scaffold0018 (1 HSPs)
scaffold0018 (348-465)||(10357-10474)
[»] scaffold0047 (2 HSPs)
scaffold0047 (317-453)||(18119-18254)
scaffold0047 (336-453)||(17582-17699)
[»] scaffold0389 (1 HSPs)
scaffold0389 (378-477)||(13493-13592)
[»] scaffold0557 (1 HSPs)
scaffold0557 (335-439)||(2149-2253)
[»] scaffold0277 (1 HSPs)
scaffold0277 (390-477)||(14662-14749)
[»] scaffold0333 (2 HSPs)
scaffold0333 (340-462)||(4610-4732)
scaffold0333 (361-462)||(5091-5192)
[»] scaffold0391 (1 HSPs)
scaffold0391 (345-453)||(14795-14903)
[»] scaffold0664 (1 HSPs)
scaffold0664 (345-411)||(4008-4074)
[»] scaffold0005 (3 HSPs)
scaffold0005 (336-405)||(245131-245200)
scaffold0005 (356-450)||(245580-245674)
scaffold0005 (419-462)||(245676-245719)
[»] scaffold0088 (1 HSPs)
scaffold0088 (340-403)||(23722-23785)
[»] scaffold0137 (1 HSPs)
scaffold0137 (419-485)||(7070-7136)
[»] scaffold0007 (1 HSPs)
scaffold0007 (340-408)||(142303-142371)
[»] scaffold0101 (1 HSPs)
scaffold0101 (336-395)||(45431-45490)
[»] scaffold0071 (1 HSPs)
scaffold0071 (419-482)||(44676-44739)


Alignment Details
Target: chr5 (Bit Score: 476; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 12 - 629
Target Start/End: Complemental strand, 4673896 - 4673265
Alignment:
Q  12 atgaataagttagacggtgaaggaatactatagacaatggaccaaacctgaaatttgactatgatttgcttaatgcagtgcagcatgtttgaaacgttat 111  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4673896 atgaataagttagacggtgaaggaatactatagacaatagaccaaacctgaaatttgactatgatttgcttaatgcagtgcagcatgtttgaaacgttat 4673797  T
Q  112 ataattagcaaatatttataatttactatttgataaactcaactaatgtatcataatttatattaactaattttgagaacaattatatcaaatttattgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4673796 ataattagcaaatatttataatttactatttgataaactcaattaatgtatcataattcatattaactaattttgagaacaattatatcaaatttattgt 4673697  T
Q  212 aacacccaaagttgatgagggcagggaacggtcgtcggtccacaaagtatgatattgagcggtttccgataacttgtggacgaaccaaatcacattagaa 311  Q
    |||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  4673696 aacacccaaagttgatgaggacggggagcggtcgtcggtgcacaaagtatgatattgagcggtttccgacaacttgtggacgaaccaaatcacattggaa 4673597  T
Q  312 tgaaagaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggta 411  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4673596 tgaaagaggccgtgtagatatagaactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggta 4673497  T
Q  412 tttcattccataagaactccacag------------------ttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaaaacaagtt 493  Q
    ||||||||||||||||||||||||                  |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  4673496 tttcattccataagaactccacagttaagcggaactccacggttaaacgtgtttgacttgaaacaattttgggatagatgaccttctgaaaaaacaagtt 4673397  T
Q  494 gagaaaacttgtgttcatttgttgggtcagtcgacaatcctaaatacagtttaggctaatagtaggactaacagatgataatcgatagttgcagagacat 593  Q
    |||||||||| |||| ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||    |||||||||||||||||| |||||||    
T  4673396 gagaaaacttatgttgatttgttgggtcagtcgacaatcttaaaaacagtctaggctaatagtaggacta----atgataatcgatagttgcggagacat 4673301  T
Q  594 ttaatattttgaaacacgagtcctgcagttcttcac 629  Q
    ||| ||||||||||||||||||||||| ||||||||    
T  4673300 ttagtattttgaaacacgagtcctgcacttcttcac 4673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 2193861 - 2194002
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  2193861 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 2193960  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  2193961 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 2194002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 8391422 - 8391282
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||||| ||||||| ||||  | ||||||||||||||||| ||    
T  8391422 actacatgattgaaggaagacttataagaattgtttggta-ctcctgtatcaacaagatgcatcttcttttcggtagctaattccataagaactccatag 8391324  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  8391323 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 8391282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 42788747 - 42788606
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||| |||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||| |||||||||||||    
T  42788747 actacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactccacag 42788648  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||||| ||||||    
T  42788647 ttaagcgtgcttgacttggagcaattttgggataggtgacct 42788606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 340 - 463
Target Start/End: Complemental strand, 8642131 - 8642008
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| ||||||||||||||||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  8642131 catggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 8642032  T
Q  440 acgtgtttgacttgaagcaatttt 463  Q
     |||| |||||||| |||||||||    
T  8642031 gcgtgcttgacttggagcaatttt 8642008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 383 - 477
Target Start/End: Complemental strand, 15513066 - 15512972
Alignment:
Q  383 tatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  15513066 tatcaacaagatgcatcttctttttggtatctcattccataagaactccacaattaaacgtgcttgacttgaagcaattttgggatggatgacct 15512972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 2474008 - 2474145
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||   ||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  2474008 catggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2474107  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  2474108 gcgtgcttgacttggagcaattttgggatgggtgacct 2474145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 10927047 - 10926930
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||| |||||||| | |||||||||||||||||||||    
T  10927047 actacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaactccacag 10926948  T
Q  436 ttaaacgtgtttgacttg 453  Q
    ||||||||| ||||||||    
T  10926947 ttaaacgtgcttgacttg 10926930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 10927504 - 10927387
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  10927504 actacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 10927405  T
Q  436 ttaaacgtgtttgacttg 453  Q
    ||||||||| ||||||||    
T  10927404 ttaaacgtgcttgacttg 10927387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 17445556 - 17445415
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||| | ||||  |||||||||||||| |||||||    
T  17445556 actacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatccacag 17445457  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  17445456 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 17445415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 340 - 482
Target Start/End: Complemental strand, 3887154 - 3887012
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||| |||||||||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||| |||||||||    
T  3887154 catggttgaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataagaacttcacagttaa 3887055  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
     |||| |||||||| ||||||||| |||| | |||||| ||||    
T  3887054 gcgtgcttgacttggagcaatttttggatgggtgacctactgg 3887012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 189117 - 189254
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| ||||||||||||| || ||||||| ||||  ||||||||||||||||||||||||||    
T  189117 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaactccacagttaa 189216  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     | || |||||||| |||||||||||||| | ||||||    
T  189217 gcatgcttgacttggagcaattttgggatgggtgacct 189254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 2474454 - 2474591
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||| ||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  2474454 catggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2474553  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||| ||| | ||||||    
T  2474554 gcgtgcttgacttggagcaattttgagatgggtgacct 2474591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 34372113 - 34372254
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||| ||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||| |||||    
T  34372113 actacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcacag 34372212  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  34372213 ttaagcgtgcttgacttggagcaattttgggattggtgacct 34372254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 482
Target Start/End: Complemental strand, 21886243 - 21886101
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  || | |||||||||||||||| ||||||| ||||  ||||||||||||||||||| ||||||    
T  21886243 catggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaaagttaa 21886144  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
      ||| |||||||| |||||||||||||| | |||||| ||||    
T  21886143 gtgtgcttgacttggagcaattttgggatgggtgacctactgg 21886101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 34371661 - 34371803
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||| ||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||| ||||||||||    
T  34371661 catggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccacagttaa 34371760  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
     |||| |||||||| |||||||||||||| | |||||| ||||    
T  34371761 gcgtgcttgacttggagcaattttgggatgggtgacctactgg 34371803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 340 - 475
Target Start/End: Original strand, 34867839 - 34867974
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||| ||||||||||||| ||||||    
T  34867839 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccatagttaa 34867938  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgac 475  Q
     |||| || ||||  |||||||||||||||| ||||    
T  34867939 gcgtgcttaactttgagcaattttgggataggtgac 34867974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 347 - 477
Target Start/End: Complemental strand, 3886691 - 3886561
Alignment:
Q  347 gaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtt 446  Q
    |||||||  |||||| ||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||| ||||||    
T  3886691 gaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtt 3886592  T
Q  447 tgacttgaagcaattttgggatagatgacct 477  Q
    |||| || ||||||||| |||| | ||||||    
T  3886591 tgacgtggagcaatttttggatgggtgacct 3886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 1821955 - 1822068
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||||||| ||||    
T  1821955 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacatttaa 1822054  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  1822055 gcgtgcttgacttg 1822068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 364 - 478
Target Start/End: Original strand, 18304504 - 18304618
Alignment:
Q  364 aattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaatttt 463  Q
    |||| |||||||  |||| |||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||| | ||||||||||| |||||||||    
T  18304504 aattgtttggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaattccacagttaagcatgtttgacttggagcaatttt 18304603  T
Q  464 gggatagatgacctt 478  Q
    | ||| | |||||||    
T  18304604 gtgatgggtgacctt 18304618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 22556585 - 22556722
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||| ||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||  |||||||| |||||||||    
T  22556585 catggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaa 22556684  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     ||||  ||||||| |||||||||||||| | ||||||    
T  22556685 gcgtggctgacttggagcaattttgggatgggtgacct 22556722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 27646935 - 27646819
Alignment:
Q  337 ctacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagt 436  Q
    ||||||| |||||||||| |||||||||||| |||||||  |||| || ||||||||||||| ||||||||||||   |||| |||||||||||||||||    
T  27646935 ctacatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactccacagt 27646836  T
Q  437 taaacgtgtttgacttg 453  Q
    ||| |||| ||| ||||    
T  27646835 taagcgtgcttgtcttg 27646819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 22557018 - 22557155
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||| ||||| |||||||  |||  |||||||||||||||| ||||||| ||||  ||||||  |||||||| |||||||||    
T  22557018 catggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaa 22557117  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     ||||  ||||||| |||||||||||||| | ||||||    
T  22557118 gcgtgcctgacttggagcaattttgggatgggtgacct 22557155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 39146984 - 39147101
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||| || |||||||||||| |||| ||  || | ||| |||||||||||| ||||||||||||   |||||||||||||||||||||    
T  39146984 actacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataagaactccacag 39147083  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  39147084 ttaagcgtgcttgacttg 39147101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 452
Target Start/End: Complemental strand, 20039594 - 20039460
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 416  Q
    ||||| |||||| ||||  |||||||  |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||| ||||||||   ||    
T  20039594 gaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttc-ttttggtagccca 20039496  T
Q  417 ttccataagaactccacagttaaacgtgtttgactt 452  Q
    |||||||||||||| ||||||||  ||| |||||||    
T  20039495 ttccataagaactctacagttaagtgtgcttgactt 20039460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 453
Target Start/End: Complemental strand, 5066987 - 5066875
Alignment:
Q  341 atgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaa 440  Q
    |||||| ||||||  |||||||||||| |||||||  | || |||||||||||||||| |||||||||||| |  ||| ||||| ||||||||| |||||    
T  5066987 atgattaaaggaaaacttataagaattgtttggtattatctatatcaacaagatgcattttctttttggtagtctatttcataaaaactccacaattaaa 5066888  T
Q  441 cgtgtttgacttg 453  Q
    |||||||| ||||    
T  5066887 cgtgtttgccttg 5066875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 29680166 - 29680091
Alignment:
Q  378 acctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||| |||||||||||||||| ||||||||||||   |||| |||||||||||||||||||| |||||||||||||    
T  29680166 acctatatcaacaagatgcatcttctttttggtagcccattacataagaactccacagttaagcgtgtttgacttg 29680091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 480
Target Start/End: Complemental strand, 18750298 - 18750153
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    |||| |||| ||||||||||  |||||| |||| |||||||  |||| || ||| ||||||||| ||||||| ||||  | ||||||||||||||||| |    
T  18750298 aactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactccata 18750199  T
Q  435 gttaaacgtgtttgacttgaagcaattttgggatagatgaccttct 480  Q
     |||| |||  |||||||| ||||||||| |||| | |||||||||    
T  18750198 attaatcgtacttgacttggagcaattttaggatgggtgaccttct 18750153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 481
Target Start/End: Complemental strand, 30684648 - 30684512
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    ||||||| || |||||| ||||| |||||||  | || ||  |||||||||||| ||||||| ||||  |||  ||||||||||||||||||||| ||||    
T  30684648 ttgaagggaggcttatatgaattgtttggtactatctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgtg 30684549  T
Q  445 tttgacttgaagcaattttgggatagatgaccttctg 481  Q
     |  ||||| |||||||||||||| | ||||||||||    
T  30684548 ctcaacttggagcaattttgggatgggtgaccttctg 30684512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 11757335 - 11757256
Alignment:
Q  383 tatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattt 462  Q
    ||||||||| |||||| ||||||| |||| |||| |||||||||||||||||||||| |||| |||||||  ||||||||    
T  11757335 tatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacagttaagcgtgcttgacttacagcaattt 11757256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 345 - 480
Target Start/End: Complemental strand, 24182337 - 24182203
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| ||||||||||||||||||||  | || || ||||||||||||| ||| ||| ||||   ||  |||||| ||||  |||||||| ||||    
T  24182337 ttgaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttc-tttcggtaccccaaaccataataacttaacagttaagcgtg 24182239  T
Q  445 tttgacttgaagcaattttgggatagatgaccttct 480  Q
     |||||||| |||||||||||||| | |||||||||    
T  24182238 gttgacttggagcaattttgggatgggtgaccttct 24182203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 467
Target Start/End: Complemental strand, 30719897 - 30719775
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||| ||||| |||||||  |||| ||  |||||||||||| ||||||| ||||  |||  |||||||||||||||| |||| ||||    
T  30719897 ttgaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacaattaagcgtg 30719798  T
Q  445 tttgacttgaagcaattttggga 467  Q
     |  ||||| |||||||||||||    
T  30719797 ctcaacttggagcaattttggga 30719775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 465
Target Start/End: Original strand, 42429193 - 42429319
Alignment:
Q  339 acatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtta 438  Q
    ||||| |||||||| | |||||||||||| |||||||  |||| ||||||||| ||||||||||||||  |||   | || |||||||||| || |||||    
T  42429193 acatggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattcttttccgtagcccgttacataagaacttcatagtta 42429292  T
Q  439 aacgtgtttgacttgaagcaattttgg 465  Q
    |  ||| ||||||| ||||||||||||    
T  42429293 agggtgcttgacttaaagcaattttgg 42429319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 482
Target Start/End: Complemental strand, 20858633 - 20858497
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||| ||| |||||||||||| |||||||    || |||||||||||||| | |||||||  |||  ||||||||||||||||||| ||||||   ||    
T  20858633 ttgaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaaggttg 20858534  T
Q  445 tttgacttgaagcaattttgggatagatgaccttctgg 482  Q
     |||||||| ||||| |||||||| | |||||||||||    
T  20858533 cttgacttggagcaactttgggat-ggtgaccttctgg 20858497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 403
Target Start/End: Complemental strand, 2058752 - 2058690
Alignment:
Q  341 atgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattct 403  Q
    |||||||||||||| |||||| ||||| |||||||  |||| ||||||||||||||| |||||    
T  2058752 atgattgaaggaagacttatatgaattgtttggtactacctatatcaacaagatgcaaattct 2058690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 481
Target Start/End: Original strand, 4102924 - 4102986
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctg 481  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||| |||   ||||||||||    
T  4102924 ccataagaacttcacagttaaacgtgcttgacttggagcaattttgagatgagtgaccttctg 4102986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 438
Target Start/End: Complemental strand, 4658073 - 4657992
Alignment:
Q  357 ttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtta 438  Q
    |||||||| || |||| ||  |||| || |||||| |||||| |||||||||||| | ||||||||||||||| ||||||||    
T  4658073 ttataagacttgtttgatactacctataacaacaacatgcatcttctttttggtagtccattccataagaacttcacagtta 4657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 11160782 - 11160694
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataa 424  Q
    |||||||  |||||||||| ||||||| |||| |||||||  | || | |||||||||||||||||||||   ||| ||||||||||||    
T  11160782 actacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcatattctttcacgtagttcattccataa 11160694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 30720276 - 30720212
Alignment:
Q  421 ataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    |||||||||| |||||||| |||| |||||||| | |||||||||||| |||||| |||| ||||    
T  30720276 ataagaactctacagttaatcgtgcttgacttggaacaattttgggatggatgactttcttgaaa 30720212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 485
Target Start/End: Original strand, 5785969 - 5786039
Alignment:
Q  415 cattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    |||||||||||||||| ||  |||| ||||||||||||| ||||||||| ||||   ||| ||||||||||    
T  5785969 cattccataagaactctacgcttaagcgtgtttgacttggagcaattttaggatgagtgatcttctggaaa 5786039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 49998685 - 49998822
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  49998685 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 49998784  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     ||||||||||||| |||||||||||||| | ||||||    
T  49998785 gcgtgtttgacttggagcaattttgggatgggtgacct 49998822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 482
Target Start/End: Complemental strand, 12692090 - 12691948
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  12692090 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 12691991  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
     |||| |||||||| |||||||||||||| | |||||| ||||    
T  12691990 gcgtgcttgacttggagcaattttgggatgggtgacctactgg 12691948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 44471420 - 44471279
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  44471420 actacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 44471321  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||| ||| |||||||||||||| | ||||||    
T  44471320 ttaagcgtgcttgatttggagcaattttgggatgggtgacct 44471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 335 - 484
Target Start/End: Complemental strand, 21220427 - 21220278
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    ||||| ||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||  |||||| ||||||||| ||||    
T  21220427 aactatatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataagaactacaca 21220328  T
Q  435 gttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaa 484  Q
    ||||| ||||||||||||| |||||||||||||  | |||||| ||||||    
T  21220327 gttaagcgtgtttgacttggagcaattttgggacgggtgacctactggaa 21220278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 35871677 - 35871813
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||| ||||| ||||||| ||||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  35871677 catggttgaaggaaggcttatatgaattgtttggtaccacctatatcaacaagatgcat-ttcttttcggtagctcattccataagaactccacagttaa 35871775  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  35871776 gcgtgcttgacttggagcaattttgggatgggtgacct 35871813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 1645844 - 1645727
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  1645844 actacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 1645745  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  1645744 ttaagcgtgcttgacttg 1645727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 337 - 477
Target Start/End: Complemental strand, 7678716 - 7678576
Alignment:
Q  337 ctacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagt 436  Q
    ||||||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  | |||||||||||||||||||||    
T  7678716 ctacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacagt 7678617  T
Q  437 taaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||  ||| |||||||| |||||||||||||| | ||||||    
T  7678616 taagtgtgcttgacttggagcaattttgggatgggtgacct 7678576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 317 - 453
Target Start/End: Complemental strand, 50398652 - 50398516
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 416  Q
    ||||| |||||| ||||  |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||    
T  50398652 gaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctca 50398553  T
Q  417 ttccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||||||||||| |||||| |||| ||||||||    
T  50398552 ttccataagaactccatagttaagcgtgcttgacttg 50398516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 357 - 477
Target Start/End: Complemental strand, 50814899 - 50814779
Alignment:
Q  357 ttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaag 456  Q
    ||||||||||| |||||||  | || |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||| |||||||| ||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggag 50814800  T
Q  457 caattttgggatagatgacct 477  Q
    |||||||||||| ||||||||    
T  50814799 caattttgggatggatgacct 50814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 338 - 453
Target Start/End: Complemental strand, 50399086 - 50398971
Alignment:
Q  338 tacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtt 437  Q
    |||||| |||||||||| |||||||||||| |||||||  |||| |||||||| ||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  50399086 tacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataagaactccacagtt 50398987  T
Q  438 aaacgtgtttgacttg 453  Q
    || |||||||||||||    
T  50398986 aagcgtgtttgacttg 50398971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 23350374 - 23350237
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||   ||| |||||||||||||||| ||||||| ||||  || ||||||||||||| || ||||||    
T  23350374 catggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatcttcttttcggtagctccttccataagaacttcatagttaa 23350275  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| ||||||||    
T  23350274 gcgtgcttgacttggagcaattttgggatggatgacct 23350237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 335 - 453
Target Start/End: Complemental strand, 23942885 - 23942767
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    ||||||||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| |||||||| |||   ||||||||||||||||||||    
T  23942885 aactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccaca 23942786  T
Q  435 gttaaacgtgtttgacttg 453  Q
    ||||| |||| ||||||||    
T  23942785 gttaagcgtgcttgacttg 23942767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 339 - 453
Target Start/End: Complemental strand, 23943334 - 23943220
Alignment:
Q  339 acatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtta 438  Q
    ||||| |||||||||| ||||||| || |||||||||  |||| |||||||||||||||| ||||||||||||   ||||||||||||||||||||||||    
T  23943334 acatggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagtta 23943235  T
Q  439 aacgtgtttgacttg 453  Q
    | |||| ||||||||    
T  23943234 agcgtgcttgacttg 23943220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 356 - 477
Target Start/End: Complemental strand, 24629052 - 24628931
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| |||||||  |||| |||||||||||||||| |||||||  |||  || ||||||||||||||||||||||| |||| |||||||| |    
T  24629052 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtgcttgacttgga 24628953  T
Q  456 gcaattttgggatagatgacct 477  Q
    ||||||||||||| | ||||||    
T  24628952 gcaattttgggatgggtgacct 24628931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 356 - 477
Target Start/End: Complemental strand, 24629508 - 24629387
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  || ||||||||||| ||||||||||| |||| |||||||| |    
T  24629508 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataagaattccacagttaagcgtgcttgacttgga 24629409  T
Q  456 gcaattttgggatagatgacct 477  Q
    ||||||||||||| | ||||||    
T  24629408 gcaattttgggatgggtgacct 24629387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 211 - 453
Target Start/End: Complemental strand, 51331509 - 51331259
Alignment:
Q  211 taacacccaaagttgatgagggcagggaacggtcgtcggtccacaaagtatgatattgagcggtttccgataacttgtggacgaaccaaatcacattaga 310  Q
    |||||||||| | |||||||||| ||||  ||| |||||| ||||| | |||||| ||||||||| || ||||||| | ||| | || ||||||||  ||    
T  51331509 taacacccaaggctgatgagggcggggagtggttgtcggtgcacaaggcatgataatgagcggttccctataacttctagacaagccgaatcacatcgga 51331410  T
Q  311 atgaaag--------aggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattc 402  Q
    |||| ||        |||| |||||| |||   |||||||| |||||||||| |||||||||||| |||||||  | || |||||||||||| ||| |||    
T  51331409 atgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatacatcttc 51331310  T
Q  403 tttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||| ||||  ||||| |||||||||||||||||||| |||| ||||||||    
T  51331309 ttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttg 51331259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 53996210 - 53996093
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  ||||||| |||| |||||||  |||| |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  53996210 actacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaactccacag 53996111  T
Q  436 ttaaacgtgtttgacttg 453  Q
    ||||  ||| ||||||||    
T  53996110 ttaagtgtgcttgacttg 53996093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 336 - 480
Target Start/End: Original strand, 27026548 - 27026691
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||| |||||||||||| |||||||||||| |||| ||  |||| |||||||||||||||| || |||||||||   ||||||||||||||| |  ||    
T  27026548 actacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagcccattccataagaactacgtag 27026646  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgaccttct 480  Q
    |||| |||| ||||||||||||||||||||||  | |||||||||    
T  27026647 ttaagcgtgcttgacttgaagcaattttgggaagggtgaccttct 27026691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 345 - 477
Target Start/End: Complemental strand, 44470960 - 44470829
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    ||||| |||| |||||||||||| |||||||  |||| |||||||||||||||| |||| || | ||  |||||||||||||||||||||||||| ||||    
T  44470960 ttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctgttcg-taactcattccataagaactccacagttaagcgtg 44470862  T
Q  445 tttgacttgaagcaattttgggatagatgacct 477  Q
     |||||||| |||||||||||||| | ||||||    
T  44470861 cttgacttggagcaattttgggatggttgacct 44470829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 27029322 - 27029425
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||| |||||||||||| ||||||||||||||||||||  || | |||||||||||||||| ||||||| ||||   |||||||||||||||||||||    
T  27029322 actacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacag 27029421  T
Q  436 ttaa 439  Q
    ||||    
T  27029422 ttaa 27029425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 3169251 - 3169368
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| ||||||| |||| |||||||  |||| |||||||||||||||| ||||||||||||   || |||||||||||||||||     
T  3169251 actacatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactccacac 3169350  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  3169351 ttaagcgtgcttgacttg 3169368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 437
Target Start/End: Complemental strand, 4127532 - 4127431
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||  |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  4127532 actacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 4127433  T
Q  436 tt 437  Q
    ||    
T  4127432 tt 4127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 340 - 452
Target Start/End: Original strand, 14351844 - 14351956
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| ||| ||||| || |||||||  | || |||||||||||||||| |||||||||||||   ||||||||||||||||||||||||    
T  14351844 catggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttctttttggtatcctattccataagaactccacagttaa 14351943  T
Q  440 acgtgtttgactt 452  Q
     ||||||||||||    
T  14351944 gcgtgtttgactt 14351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 356 - 481
Target Start/End: Original strand, 1464212 - 1464337
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||| |||||||||| |||| || | |||| || ||||| |    
T  1464212 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcacaatttagcgtgcttaacttgga 1464311  T
Q  456 gcaattttgggatagatgaccttctg 481  Q
    ||||||||||||| | ||||||||||    
T  1464312 gcaattttgggatgggtgaccttctg 1464337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 4127984 - 4127843
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||| ||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||    |||||||||||||| || ||    
T  4127984 actatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaacttcagag 4127885  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| ||| |||  |||||||||||||| | ||||||    
T  4127884 ttaagcgtgcttggcttagagcaattttgggatgggtgacct 4127843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 13613972 - 13613876
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||||||| |||| || ||||| |||||||||||||||| ||||||  |||| ||||||| ||||||||||||||||||| |||||||||||||    
T  13613972 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagttcattctataagaactccacagttaagcgtgtttgacttg 13613876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 29628762 - 29628646
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||  | || | |||||||   |||||||||||||||||||||    
T  29628762 actacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgtgtctt-tgtttggtagcccattccataagaactccacag 29628664  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||||||||||||    
T  29628663 ttaagcgtgtttgacttg 29628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 4185782 - 4185902
Alignment:
Q  358 tataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagc 457  Q
    |||||||||| |||| || ||| | || ||||||||||||| ||||||||||||  |||||| | |||||||| ||||||||   || |||||||| |||    
T  4185782 tataagaattgtttgataccacatataccaacaagatgcatcttctttttggtagctcattctacaagaactctacagttaagtatgcttgacttggagc 4185881  T
Q  458 aattttgggatagatgacctt 478  Q
    ||||||||||||| |||||||    
T  4185882 aattttgggataggtgacctt 4185902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 369 - 468
Target Start/End: Complemental strand, 15306153 - 15306054
Alignment:
Q  369 tttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggat 468  Q
    |||||||  |||| ||| |||||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||| |||||||  |||||| |||||||    
T  15306153 tttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaatcttgggat 15306054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 468
Target Start/End: Complemental strand, 27578531 - 27578420
Alignment:
Q  357 ttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaag 456  Q
    ||||||||||||||||||   |||| |||||||||||||||| ||||||| |||||  ||  |||||||||||||| |||||| |||| |||||||  |     
T  27578531 ttataagaattatttggtgctacctatatcaacaagatgcatcttcttttcggtatcccaaaccataagaactccatagttaagcgtgcttgacttcgaa 27578432  T
Q  457 caattttgggat 468  Q
    ||||||||||||    
T  27578431 caattttgggat 27578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 347 - 470
Target Start/End: Complemental strand, 43929047 - 43928925
Alignment:
Q  347 gaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtt 446  Q
    |||||||  |||| ||||||| |||||||  || | || ||||||||||||| |||||||||||| || ||| |||||||| |||||| ||||||||| |    
T  43929047 gaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtt-atttcataagaaatccacaattaaacgtgct 43928949  T
Q  447 tgacttgaagcaattttgggatag 470  Q
    ||||||  ||||||||||||||||    
T  43928948 tgactttgagcaattttgggatag 43928925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 456
Target Start/End: Original strand, 21067783 - 21067896
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| ||||||   |||| |||||||||||| ||| ||   ||||||| | ||||||||||||||| |||||||||    
T  21067783 catggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagatacatttt---tttggtagtccattccataagaacttcacagttaa 21067879  T
Q  440 acgtgtttgacttgaag 456  Q
     |||| |||||||||||    
T  21067880 gcgtgcttgacttgaag 21067896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 345 - 482
Target Start/End: Original strand, 17029384 - 17029521
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    ||||| |||| ||| ||| |||| ||| |||  |||| |||||||||||||||||||  ||||||||  | ||||||||||||||||||||||||  |||    
T  17029384 ttgaatgaagacttgtaataattgtttagtactacctatatcaacaagatgcatattacttttggtaccttattccataagaactccacagttaagagtg 17029483  T
Q  445 tttgacttgaagcaattttgggatagatgaccttctgg 482  Q
     || ||||| |||| ||||||| | | |||||||||||    
T  17029484 cttaacttggagcatttttgggttgggtgaccttctgg 17029521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 31817943 - 31817830
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| || ||||  |||| || ||||||||||||| ||||||| |||| | |||| |||||||||| || ||||||    
T  31817943 catggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaacttcatagttaa 31817844  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  31817843 gcgtgcttgacttg 31817830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 463
Target Start/End: Complemental strand, 20306241 - 20306132
Alignment:
Q  351 gaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgac 450  Q
    |||| |||||||||||| |||||||  | || ||||||||||||||||   |||||||||||  |||| |||||||||| ||| ||||| |||| |||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgcat---ctttttggtatcccatttcataagaactacacggttaagcgtgcttgac 20306145  T
Q  451 ttgaagcaatttt 463  Q
    ||| |||||||||    
T  20306144 ttggagcaatttt 20306132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 466
Target Start/End: Complemental strand, 8467895 - 8467773
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| || ||||||||||||| ||||||| ||||   |        ||||||||||||    
T  8467895 actacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagccc--------agaactccacag 8467804  T
Q  436 ttaaacgtgtttgacttgaagcaattttggg 466  Q
    |||| |||| |||||||| ||||||||||||    
T  8467803 ttaagcgtgcttgacttggagcaattttggg 8467773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 11828499 - 11828430
Alignment:
Q  417 ttccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaaa 486  Q
    ||||||||||||||||||||||| |||| || ||||| |||| ||||||||| | |||||||||||||||    
T  11828499 ttccataagaactccacagttaagcgtgctttacttggagcatttttgggatgggtgaccttctggaaaa 11828430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 480
Target Start/End: Original strand, 17628560 - 17628700
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||| || |||||||||||| |||||||  |||| || ||||||||||||| ||||||| | ||   ||  ||||||||| ||||||||| |    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttcttttcgatagcccaacccataagaattccacagttga 17628659  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttct 480  Q
     ||||  ||||||| |||||||||| ||| | |||||||||    
T  17628660 gcgtgcctgacttggagcaattttgagatgggtgaccttct 17628700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 468
Target Start/End: Complemental strand, 23091584 - 23091474
Alignment:
Q  358 tataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagc 457  Q
    ||||| |||| |||||||  || | ||| |||||||||||| |||||| |||||  | |||| |||| |||||||||||||| | || |||||||| |||    
T  23091584 tataaaaattgtttggtactacatatattaacaagatgcatcttctttctggtagcttattctataaaaactccacagttaagcatgcttgacttgtagc 23091485  T
Q  458 aattttgggat 468  Q
    |||||||||||    
T  23091484 aattttgggat 23091474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 405
Target Start/End: Complemental strand, 14572245 - 14572176
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattcttt 405  Q
    |||||||| ||||||| || |||||||||||| |||||||  |||| |||||||||||||||| ||||||    
T  14572245 actacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttt 14572176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 21067331 - 21067444
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| || |||| ||||||||||||  || | |||||||||||||||| ||||||  ||||  |||||| | ||| |||||||| ||||    
T  21067331 catggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttctttccggtagctcattctaaaagtactccacaattaa 21067430  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  21067431 gcgtgcttgacttg 21067444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 342 - 467
Target Start/End: Original strand, 34554480 - 34554605
Alignment:
Q  342 tgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaac 441  Q
    |||||||| |||  |||||||||||| ||||  |  |||| || || |||||||||| || |||||||||   ||||||||||||||| || ||||||||    
T  34554480 tgattgaaagaatgcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaacttcatagttaaac 34554579  T
Q  442 gtgtttgacttgaagcaattttggga 467  Q
     ||||||||||  || ||||||||||    
T  34554580 atgtttgacttagagaaattttggga 34554605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 45682248 - 45682321
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttgg 409  Q
    |||||||||||||| ||||  |||||||||||||||||||  | || || ||||||||||||| ||||||||||    
T  45682248 actacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagatgcattttctttttgg 45682321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 468
Target Start/End: Original strand, 33764905 - 33765037
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||| | |||| ||| |||||||| ||||||   |||| || ||||||||||||| |||||||| |||  |||||  ||||||||| ||||     
T  33764905 actacatggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcacac 33765004  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggat 468  Q
    |||| |||| |||| ||| | ||||||||||||    
T  33765005 ttaagcgtgcttgatttggatcaattttgggat 33765037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 450
Target Start/End: Complemental strand, 14571796 - 14571702
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgac 450  Q
    |||||||||||| |||||||  |||| |||||||||||||||| |||||||  |||    |  ||||||||||||||||||||| |||| |||||    
T  14571796 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtgcttgac 14571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 4186232 - 4186317
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaac 441  Q
    ||||||||||| ||||||||  ||||  || |||||||| ||| ||||||||||||   |||| |||||||||| |||||||||||    
T  4186232 cttataagaatgatttggtactacctacatgaacaagattcatcttctttttggtagcccattgcataagaactacacagttaaac 4186317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 481
Target Start/End: Original strand, 41869967 - 41870108
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||||||||| |||||||||||| | || ||  |||| ||||||||||| |||| |||||||  |||   ||   |||||||||| |||| |||     
T  41869967 catgattgaaggaagacttataagaattgtatgatactacctatatcaacaagacgcatcttcttttcagtaacccaaatcataagaacttcacaattat 41870066  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctg 481  Q
     | |||||||| |  |||||||||||||| || |||||||||    
T  41870067 gcatgtttgacatagagcaattttgggatggaagaccttctg 41870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 468
Target Start/End: Complemental strand, 4127432 - 4127381
Alignment:
Q  417 ttccataagaactccacagttaaacgtgtttgacttgaagcaattttgggat 468  Q
    ||||||||||||||||||||||| | || ||| |||| ||||||||||||||    
T  4127432 ttccataagaactccacagttaagcatgattggcttggagcaattttgggat 4127381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 9423949 - 9423862
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaa 427  Q
    |||| ||||| |||| ||||||| |||| |||||||  |||| |||||||||||||||| |||||| | |||   |||||||||||||    
T  9423949 catggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctttctagtagcccattccataagaa 9423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 14571700 - 14571657
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattt 462  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||    
T  14571700 ccataagaactccacagttaagcgtgcttgacttggagcaattt 14571657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 23976310 - 23976243
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattcttttt 407  Q
    |||||||||||||||  ||||||||||| |||||||  |||| ||  |||||||||||| ||||||||    
T  23976310 catgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttcttttt 23976243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 480
Target Start/End: Original strand, 42838680 - 42838815
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatatt-ctttttgg-tatttcattccataagaactc-cacagttaaacgtg 444  Q
    ||||||| | ||||| |||| |||||||  |||| ||||||||| |||||| || |||||| | || |||||||||||||||||  ||||||||| ||||    
T  42838680 aaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctttctttttcgatagttcattccataagaactttcacagttaagcgtg 42838779  T
Q  445 tttgacttgaagcaattttgggatagatgaccttct 480  Q
    ||||||||  | ||||  ||| || |||||||||||    
T  42838780 tttgacttagaacaataatggaatggatgaccttct 42838815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 52048710 - 52048657
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaac 441  Q
    |||||||||||| ||| ||||| ||  ||||||||||||||||||||||||||||    
T  52048710 aacaagatgcatcttcattttg-taagtcattccataagaactccacagttaaac 52048657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 436
Target Start/End: Complemental strand, 33294936 - 33294887
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagt 436  Q
    ||||| |||||| |||||||| ||| |||| |||||||||||||||||||    
T  33294936 aacaaaatgcatcttcttttttgtagttcactccataagaactccacagt 33294887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 23976229 - 23976181
Alignment:
Q  420 cataagaactccacagttaaacgtgtttgacttgaagcaattttgggat 468  Q
    ||||| ||||||||||||||||||| |||||||| |  |||||||||||    
T  23976229 cataaaaactccacagttaaacgtgcttgacttggaataattttgggat 23976181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 482
Target Start/End: Complemental strand, 27578922 - 27578858
Alignment:
Q  418 tccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||||||||||| ||||||||| |||| || ||||| ||| ||||||||||   |||||||||||    
T  27578922 tccataagaactacacagttaagcgtgcttaacttggagcgattttgggatgcgtgaccttctgg 27578858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 336 - 468
Target Start/End: Original strand, 2787 - 2919
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  2787 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacag 2886  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggat 468  Q
    |||| |||| |||||||| ||||||||||||||    
T  2887 ttaagcgtgcttgacttggagcaattttgggat 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 478
Target Start/End: Original strand, 15929627 - 15929769
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||| |||| ||||||||||||||||||||  |||| ||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||    
T  15929627 actacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacag 15929726  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    |||| ||||||| || ||||||||||||||||| | |||||||    
T  15929727 ttaagcgtgtttaacatgaagcaattttgggatgggtgacctt 15929769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 13492838 - 13492975
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| ||||||| |||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  13492838 catggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 13492937  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||  |||||||||||||| | ||||||    
T  13492938 gcgtgcttgacttagagcaattttgggatgggtgacct 13492975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 17027628 - 17027491
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||| ||| ||||||| ||||  ||||| ||||||||||||||||||||    
T  17027628 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaa 17027529  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  17027528 gcgtgcttgacttggagcaattttgggatgggtgacct 17027491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 20850370 - 20850507
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| ||| |||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||| ||||||||    
T  20850370 catggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactctacagttaa 20850469  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20850470 gcgtgcttgacttggagcaattttgggatgggtgacct 20850507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 20896789 - 20896648
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| |||||||  |||  |||||||||||||||||||| |    
T  20896789 actacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactccacgg 20896690  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| ||| |||| |||||||||||||| | ||||||    
T  20896689 ttaagcgtgcttggcttggagcaattttgggatgggtgacct 20896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 7912359 - 7912501
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||| ||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||| ||||||    
T  7912359 catggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataagaactccatagttaa 7912458  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    ||||| |||||||| ||||||||||| || | |||||| ||||    
T  7912459 acgtgcttgacttggagcaattttggaatgggtgacctgctgg 7912501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 7911927 - 7912064
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||     
T  7911927 catggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttat 7912026  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     | || |||||||| |||||||||||||| | ||||||    
T  7912027 gcttgcttgacttggagcaattttgggatgggtgacct 7912064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 16520013 - 16520154
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| | |||||||| ||||| ||| || |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  16520013 actacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 16520112  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||| ||| | ||||||    
T  16520113 ttaagcgtgcttgacttggagcaattttgagatgggtgacct 16520154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 317 - 453
Target Start/End: Original strand, 11062311 - 11062447
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 416  Q
    ||||| |||||| |||  ||||||||| |||||||||| |||||||||| | ||| |||  |||| |||||||||||||||| ||||||||||||   ||    
T  11062311 gaggctgtgtaggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagccca 11062410  T
Q  417 ttccataagaactccacagttaaacgtgtttgacttg 453  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  11062411 ttccataagaactccacagttaagcgtgcttgacttg 11062447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 340 - 464
Target Start/End: Complemental strand, 13191610 - 13191486
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  || ||||||||||||| |||||||||    
T  13191610 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataagaacttcacagttaa 13191511  T
Q  440 acgtgtttgacttgaagcaattttg 464  Q
     |||| |||||||| ||||||||||    
T  13191510 gcgtgcttgacttggagcaattttg 13191486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 3652531 - 3652634
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| | || ||  |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  3652531 actacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttctttttggtagttcattccataagaactccacag 3652630  T
Q  436 ttaa 439  Q
    ||||    
T  3652631 ttaa 3652634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 336 - 482
Target Start/End: Complemental strand, 23986418 - 23986272
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||| || |||||||||||| |||||||  |||| ||| |||||||||||| ||||||| ||||  |||  ||||||||||| |||||    
T  23986418 actacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataagaacttcacag 23986319  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    ||||  ||| |||||||| |||||||||||||| | |||||||||||    
T  23986318 ttaagtgtgcttgacttggagcaattttgggatgggtgaccttctgg 23986272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 9352107 - 9352248
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| | ||||| || ||||||| | || |||||||  |||| ||| |||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  9352107 actacatggtcgaagggagacttataatatttgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacag 9352206  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  9352207 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 9352248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 356 - 477
Target Start/End: Original strand, 13492397 - 13492518
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| |||| ||  |||| |||||||||||||||| ||||||| ||||  | |||||||||||||||||||||||| |||| |||||||| |    
T  13492397 cttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtgcttgacttgga 13492496  T
Q  456 gcaattttgggatagatgacct 477  Q
    ||||||||||||| | ||||||    
T  13492497 gcaattttgggatgggtgacct 13492518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 6331013 - 6330897
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| ||||||||| |||||| ||||||| ||||  ||||| ||||||||||||||||    
T  6331013 actacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttcttttcggtagctcatttcataagaactccacag 6330914  T
Q  436 ttaaacgtgtttgactt 452  Q
    |||| |||| |||||||    
T  6330913 ttaagcgtgcttgactt 6330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 14771816 - 14771717
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||    
T  14771816 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactccacagttaa 14771717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 482
Target Start/End: Original strand, 23776486 - 23776631
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||  | |||||  |||| |||||||||||||||| ||||||| ||||  ||||| |||||||||| ||||     
T  23776486 actacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcaca- 23776584  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| |||  |||||||| |||||||||||||| |||||||| ||||    
T  23776585 ttaagcgtacttgacttggagcaattttgggatggatgacctactgg 23776631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 383 - 478
Target Start/End: Original strand, 12194420 - 12194515
Alignment:
Q  383 tatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    |||||||||||||||| ||||||||  || ||||||||||||||||||||||||||| | |||||||| || ||||||||| |||| |||||||||    
T  12194420 tatcaacaagatgcatcttcttttttataattcattccataagaactccacagttaagcatgtttgacatggagcaattttaggatggatgacctt 12194515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 340 - 458
Target Start/End: Original strand, 21312020 - 21312138
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||||||||   |||| |||||||| |||| ||||||    
T  21312020 catggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcataagaaatccatagttaa 21312119  T
Q  440 acgtgtttgacttgaagca 458  Q
    ||||| |||||||| ||||    
T  21312120 acgtgcttgacttggagca 21312138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 480
Target Start/End: Complemental strand, 9440959 - 9440814
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    ||||||||| |||||||||  |||||||||||| |||||||  || | |||||||||||||||| |||||||  |||   ||  ||||||||||| ||||    
T  9440959 aactacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagtagcccaaaccataagaacttcaca 9440860  T
Q  435 gttaaacgtgtttgacttgaagcaattttgggatagatgaccttct 480  Q
    |||||  |||||||||||  |||||||||||||| | |||||||||    
T  9440859 gttaagtgtgtttgactttgagcaattttgggatgggtgaccttct 9440814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 20126283 - 20126166
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||  |||| ||  |||| |||||||||||||||| ||||||||||||   ||||||||||||| ||||||     
T  20126283 actacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaattccacaa 20126184  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  20126183 ttaagcgtgcttgacttg 20126166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 2681313 - 2681185
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||| |||| |||||||||||| |||||||  |||  |||||||||||||||| ||||||| ||||  ||||||||||||||||||||| ||||    
T  2681313 catggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacaattaa 2681214  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| || | ||| | ||||||||||||    
T  2681213 gcgtgcttaatttggaacaattttgggat 2681185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 348 - 477
Target Start/End: Complemental strand, 17731202 - 17731069
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagat----gcatattctttttggtatttcattccataagaactccacagttaaacgt 443  Q
    ||||||| |||||||||||| |||||||  |||| ||||||||||||    |||| ||||||| ||||  ||||||  ||||||||||||| |||| |||    
T  17731202 aaggaagacttataagaattgtttggtactacctatatcaacaagatagatgcatcttcttttcggtagctcattctttaagaactccacatttaagcgt 17731103  T
Q  444 gtttgacttgaagcaattttgggatagatgacct 477  Q
    | |||||||| |||||||||| ||||| ||||||    
T  17731102 gcttgacttggagcaattttgagataggtgacct 17731069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 452
Target Start/End: Original strand, 21311564 - 21311676
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  ||||  || |||||||| ||| |||||||||| |  |||||||||||||||||| |||||||    
T  21311564 catggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccatcttctttttggaagctcattccataagaactccgcagttaa 21311663  T
Q  440 acgtgtttgactt 452  Q
     |||| |||||||    
T  21311664 gcgtgcttgactt 21311676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 477
Target Start/End: Original strand, 28780209 - 28780296
Alignment:
Q  390 aagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||||||| || |||| ||||  |||||||||||||||||||||||||| |||| |||||||| |||||||||||||| | ||||||    
T  28780209 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacct 28780296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 336 - 425
Target Start/End: Complemental strand, 31821793 - 31821704
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataag 425  Q
    |||||||| |||||||||  ||||||||||||||||||||  | || |||||||||||||||| || |||||||||  ||||||||||||    
T  31821793 actacatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatcttttttttggtagctcattccataag 31821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 439
Target Start/End: Original strand, 20735727 - 20735843
Alignment:
Q  323 gtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccat 422  Q
    |||||| ||| | |||||||||||| |||||| |||||||||||| |||| ||  || | |||||||||||||||| ||||||| |||| | ||||| ||    
T  20735727 gtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtagtccattctat 20735826  T
Q  423 aagaactccacagttaa 439  Q
    || ||||||| ||||||    
T  20735827 aaaaactccatagttaa 20735843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 27334205 - 27334301
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactcc 431  Q
    |||| |||| |||||||||  |||||||||||| |||||||  |||| ||||||||||||| || ||||||| ||||  ||||||||||||||||||    
T  27334205 aactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27334301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 27394945 - 27395041
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactcc 431  Q
    |||| |||| |||||||||  |||||||||||| |||||||  |||| ||||||||||||| || ||||||| ||||  ||||||||||||||||||    
T  27394945 aactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaactcc 27395041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 33775101 - 33774986
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaaga--tgcatattctttttggtatttcattccataagaactccacagtt 437  Q
    |||| ||||||||||  ||||||||||| | ||||   |||| |||||||||||  ||||| ||||||||| || | |||||||||||||||||||||||    
T  33775101 catggttgaaggaaggattataagaattgtctggtgctacctatatcaacaagagatgcatcttctttttgatagtccattccataagaactccacagtt 33775002  T
Q  438 aaacgtgtttgacttg 453  Q
    ||  ||||||||||||    
T  33775001 aagtgtgtttgacttg 33774986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 478
Target Start/End: Complemental strand, 9440411 - 9440268
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    |||| |||| ||||| |||  |||||||||||| || ||||  || | |||||||||||||||| ||||||| ||||  ||| |||||||||||| ||||    
T  9440411 aactgcatggttgaatgaaagcttataagaattgttcggtactacttatatcaacaagatgcattttcttttcggtagctcactccataagaacttcaca 9440312  T
Q  435 gttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    |||||  ||| |||| ||| ||||||||| |||| | |||||||    
T  9440311 gttaagtgtgcttgatttggagcaatttttggatgggtgacctt 9440268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 2720661 - 2720547
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattcttttt-ggtatttcattccataagaactccacagtta 438  Q
    |||| |||||||||| |||||||||||| |||||||  |||| ||| |||||||  ||| || ||||| ||||  |||||||||||||||||||||||||    
T  2720661 catggttgaaggaagacttataagaattgtttggtactacctatattaacaagacacatctttttttttggtagctcattccataagaactccacagtta 2720562  T
Q  439 aacgtgtttgacttg 453  Q
    |  ||| ||||||||    
T  2720561 agtgtgcttgacttg 2720547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 453
Target Start/End: Original strand, 17851434 - 17851536
Alignment:
Q  351 gaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgac 450  Q
    |||| |||||||||  | |||||||  |||| |||||||||||||||| ||||||||||||   ||||| |||||||||||||| |||| |||| |||||    
T  17851434 gaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattctataagaactccacaattaagcgtgcttgac 17851533  T
Q  451 ttg 453  Q
    |||    
T  17851534 ttg 17851536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 452
Target Start/End: Original strand, 33470933 - 33470998
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgactt 452  Q
    ||||||||||||||||||||| ||| |||||| |||||||| ||||||||||  ||||||||||||    
T  33470933 aacaagatgcatattcttttttgtagttcattacataagaattccacagttatgcgtgtttgactt 33470998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 17850996 - 17851080
Alignment:
Q  369 tttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||  |||| |||||||||||||||| |||||| |||||   ||||| ||||||||||||||||||| |||| ||||||||    
T  17850996 tttggtactacctttatcaacaagatgcatcttctttctggtagcccattctataagaactccacagttaagcgtgcttgacttg 17851080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 455
Target Start/End: Complemental strand, 2890936 - 2890821
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||||||  ||||||||||| || || |  |||| |||||| ||||||| | |||||||  |||   |||||||||||||||||||||||||    
T  2890936 catggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattccataagaactccacagttaa 2890837  T
Q  440 acgtgtttgacttgaa 455  Q
     |||| ||||||||||    
T  2890836 gcgtgcttgacttgaa 2890821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 15929264 - 15929338
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactc 430  Q
    |||||||||||| |||||||   ||| |||||| ||||||||||||||||| ||||  |||||||||||||||||    
T  15929264 cttataagaattgtttggtaatgcctatatcaataagatgcatattcttttcggtagctcattccataagaactc 15929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 28583017 - 28583107
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||| |||| ||||||||||||||||| ||  | || ||||||||||||||||  |||||  |||| ||||||||||||||| |||||||    
T  28583017 ttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatcatctttccggtagttcattccataagaaatccacag 28583107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 468
Target Start/End: Original strand, 17205383 - 17205515
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    |||| |||||||||| ||||  ||||||||||| |||||||  |||| || ||||||||| ||| || |||| ||||   ||||||||||||||||||      
T  17205383 aactgcatgattgaatgaagaattataagaattgtttggtactacctttaccaacaagattcatcttgtttt-ggtagcccattccataagaactccatt 17205481  T
Q  435 gttaaacgtgtttgacttgaagcaattttgggat 468  Q
    ||||||| || |||| ||| || |||||||||||    
T  17205482 gttaaacatgcttgatttggagtaattttgggat 17205515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 20732623 - 20732740
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||| |||||| ||||||||||||||||||||  |||| ||| || || |||||||||||||| ||||   ||||| |||| ||||| || |    
T  20732623 actacatggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattcttttcggtagcccattcaataaaaactctacgg 20732722  T
Q  436 ttaaacgtgtttgacttg 453  Q
    ||||  ||| ||||||||    
T  20732723 ttaagagtgcttgacttg 20732740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 341 - 452
Target Start/End: Complemental strand, 28065934 - 28065820
Alignment:
Q  341 atgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgca---tattctttttggtatttcattccataagaactccacagtt 437  Q
    ||||||||| |||  |||||||||||| |||||||  | || |||||||||||||||   | || |||||||||  | ||||||||||||||||||| ||    
T  28065934 atgattgaatgaaagcttataagaattgtttggtactatctctatcaacaagatgcatctttttttttttggtagcttattccataagaactccacaatt 28065835  T
Q  438 aaacgtgtttgactt 452  Q
    || | ||||||||||    
T  28065834 aagcatgtttgactt 28065820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 3885126 - 3885052
Alignment:
Q  401 tctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgac 475  Q
    |||||||||||  | |||||||||||||| || |||| |||||| |||||||| |||||||||| ||||| ||||    
T  3885126 tctttttggtagcttattccataagaacttcaaagttgaacgtgcttgacttggagcaattttgagataggtgac 3885052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 441
Target Start/End: Original strand, 1991598 - 1991703
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||| | |||| |||| ||||||| |||||||  || | | | |||||||||||| ||||||| ||||  ||||| |||||||||| |||||    
T  1991598 actacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcacag 1991697  T
Q  436 ttaaac 441  Q
    ||||||    
T  1991698 ttaaac 1991703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 9441086 - 9441134
Alignment:
Q  327 agatatataactacatgattgaaggaagtcttataagaattatttggta 375  Q
    |||||| | ||||||||||||||||||  |||||||||||| |||||||    
T  9441086 agatatgtgactacatgattgaaggaaagcttataagaattgtttggta 9441134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 1e-36; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 336 - 482
Target Start/End: Original strand, 8256571 - 8256717
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  8256571 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 8256670  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| |||| |||||||| |||||||||||||| | |||||| ||||    
T  8256671 ttaagcgtgcttgacttggagcaattttgggatgggtgacctgctgg 8256717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 41754338 - 41754475
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  | || |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  41754338 catggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 41754437  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| ||||||||    
T  41754438 gcgtgcttgacttggagcaattttgggatggatgacct 41754475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 336 - 468
Target Start/End: Original strand, 29804727 - 29804859
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||| || |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  29804727 actacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 29804826  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggat 468  Q
    |||| |||| |||||||||||||||||||||||    
T  29804827 ttaagcgtgcttgacttgaagcaattttgggat 29804859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 30966283 - 30966420
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||    
T  30966283 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaa 30966382  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| | |||||||||||| | ||||||    
T  30966383 gcgtgcttgacttggaccaattttgggatgggtgacct 30966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 30966739 - 30966876
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||||||  ||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  30966739 catggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 30966838  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| || ||||| |||||||||||||| | ||||||    
T  30966839 gcgtgcttaacttggagcaattttgggatgggtgacct 30966876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 1707086 - 1707206
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||||||||||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||  ||||||||||||||||    
T  1707086 actacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataagaactccacag 1707185  T
Q  436 ttaaacgtgtttgacttgaag 456  Q
    ||||  |||||||||||||||    
T  1707186 ttaagagtgtttgacttgaag 1707206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 336 - 446
Target Start/End: Original strand, 33175003 - 33175113
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  33175003 actacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataagaactccacag 33175102  T
Q  436 ttaaacgtgtt 446  Q
    |||| ||||||    
T  33175103 ttaagcgtgtt 33175113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 11388233 - 11388373
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||| || |||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  11388233 actacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 11388331  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  11388332 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 11388373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 16379442 - 16379555
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||| ||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||||||    
T  16379442 catggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 16379541  T
Q  440 acgtgtttgacttg 453  Q
     |||||||||||||    
T  16379542 gcgtgtttgacttg 16379555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 25338094 - 25337957
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| | ||  ||||| ||||||||||||||||||||    
T  25338094 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaa 25337995  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  25337994 gcgtgcttgacttggagcaattttgggatgggtgacct 25337957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 345 - 477
Target Start/End: Original strand, 33771055 - 33771187
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||| ||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||| |||||||||||||||||||| | ||    
T  33771055 ttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcatg 33771154  T
Q  445 tttgacttgaagcaattttgggatagatgacct 477  Q
     |||||||| |||||||||||||| | ||||||    
T  33771155 cttgacttggagcaattttgggatgggtgacct 33771187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 16378986 - 16379099
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||||||||||||| ||||| |||| ||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||||||    
T  16378986 catggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 16379085  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  16379086 gcgtgcttgacttg 16379099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 348 - 465
Target Start/End: Original strand, 24818383 - 24818500
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgttt 447  Q
    ||||||| |||||||||||| ||| |||  |||| |||||||||||||||| || |||| ||||  |||||||||||||||||||||||||| |||| ||    
T  24818383 aaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgctt 24818482  T
Q  448 gacttgaagcaattttgg 465  Q
    |||||| |||||||||||    
T  24818483 gacttggagcaattttgg 24818500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 343 - 482
Target Start/End: Complemental strand, 30961977 - 30961838
Alignment:
Q  343 gattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacg 442  Q
    |||| ||||||||||||||||| ||  ||||||  |||| ||||||||||||||||||| |||| ||||    |  ||||||||||||||||||||||||    
T  30961977 gatttaaggaagtcttataagatttgattggtactacctatatcaacaagatgcatatttttttcggtagccgaaaccataagaactccacagttaaacg 30961878  T
Q  443 tgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    || |||||||  |||||||||||||| | |||||||||||    
T  30961877 tgcttgacttagagcaattttgggatgggtgaccttctgg 30961838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 356 - 477
Target Start/End: Complemental strand, 5399898 - 5399777
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||| || |||||| |||| |||||||| |    
T  5399898 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaagcgtgcttgacttgga 5399799  T
Q  456 gcaattttgggatagatgacct 477  Q
    | ||||||||||| | ||||||    
T  5399798 gaaattttgggatgggtgacct 5399777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 348 - 485
Target Start/End: Original strand, 13191031 - 13191168
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgttt 447  Q
    ||||||| |||||||||||| |||||||  || | || ||||||||||||| |||||||||||| | ||||  |||||||||||| |||||   ||| ||    
T  13191031 aaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactccatagttatgtgtgctt 13191130  T
Q  448 gacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    ||||||||| ||||||| ||||| ||||||||||||||    
T  13191131 gacttgaagaaattttgagataggtgaccttctggaaa 13191168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 345 - 453
Target Start/End: Original strand, 33174557 - 33174665
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||   ||||||||||||||||| ||||||| ||||    
T  33174557 ttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtg 33174656  T
Q  445 tttgacttg 453  Q
     ||||||||    
T  33174657 cttgacttg 33174665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 38899013 - 38898897
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||||   |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||| ||||||||||||||||    
T  38899013 actacatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacacatttcataagaactccacag 38898914  T
Q  436 ttaaacgtgtttgactt 452  Q
    |||| |||| |||||||    
T  38898913 ttaagcgtgcttgactt 38898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 336 - 439
Target Start/End: Complemental strand, 18098979 - 18098876
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||| |  |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||  ||||||||||||||||||| ||    
T  18098979 actacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccatag 18098880  T
Q  436 ttaa 439  Q
    ||||    
T  18098879 ttaa 18098876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 11394580 - 11394719
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||| || |||| |||||||  |||| |||||||||||||||| ||||||| ||||  | |||||||||||||| |||||    
T  11394580 actacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacag 11394677  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  11394678 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 11394719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 25434153 - 25434040
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||| ||  |||| |||||||||||||||| | |||| |||||   |||||||||||||||||||||||||    
T  25434153 catggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatctcctttctggtagcccattccataagaactccacagttaa 25434054  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  25434053 gcgtgcttgacttg 25434040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 30963360 - 30963232
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||||||||| |||||||||||| || ||||  |||| |||||||||||||||| || |||||||||   ||   |||||||| || ||||||||    
T  30963360 catgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttatttttggtagcccaaatcataagaattcaacagttaa 30963261  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||||||||||||    
T  30963260 gcgtgcttgacttggagcaattttgggat 30963232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 336 - 478
Target Start/End: Original strand, 83062 - 83204
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||| |  |||||||||||  |||||||  |||| || |||||||||| || || |||||||||  ||||||||||||||||| ||||    
T  83062 actacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatgaatcttttttttggtagctcattccataagaactctacag 83161  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    |||| ||||||||| ||| | |||||||| ||||  |||||||    
T  83162 ttaagcgtgtttgatttggaacaattttgtgatatgtgacctt 83204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 1912570 - 1912686
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||| | ||  ||||||||||| |||||||  |||| |||||||||||||||| ||| ||||||||   |||||||||||||||||||||    
T  1912570 actacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatcttc-ttttggtagcccattccataagaactccacag 1912668  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  1912669 ttaagcgtgattgacttg 1912686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 29259717 - 29259580
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| ||||| | |||| |||||||  || | |||||||||||||||| ||||||| ||||  ||||| |||||||||| || ||||||    
T  29259717 catggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcatagttaa 29259618  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||  |||||||||||||| | ||||||    
T  29259617 gcgtgcttgactttgagcaattttgggatgggtgacct 29259580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 468
Target Start/End: Original strand, 16542031 - 16542163
Alignment:
Q  337 ctacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttgg-tatttcattccataagaactccacag 435  Q
    ||||||| |||||||||| ||||||| |||| ||| |||  |||| ||||||||||||| || || |||||   ||  ||||||||||| ||||| ||||    
T  16542031 ctacatggttgaaggaagacttataataattgttttgtactacctatatcaacaagatgtatcttttttttttatagctcattccataaaaactctacag 16542130  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggat 468  Q
    ||||| |||||||||||| ||||||||| ||||    
T  16542131 ttaaatgtgtttgacttggagcaattttaggat 16542163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 453
Target Start/End: Complemental strand, 27883018 - 27882910
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||  |||||||||||| |||||||  | || |||||| ||||||||| |||||||| |||   | |||||||||||||||||| |||| ||||    
T  27883018 ttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttcttttttgtaggccgttccataagaactccacaattaagcgtg 27882919  T
Q  445 tttgacttg 453  Q
    |||||||||    
T  27882918 tttgacttg 27882910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 340 - 480
Target Start/End: Complemental strand, 30963817 - 30963677
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| | ||||   |||| |||||||||||||||| |||||| |||||   ||  |||||| ||||||||||||||    
T  30963817 catggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttctttctggtagcccaaaccataataactccacagttaa 30963718  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttct 480  Q
     |||| ||||||||  | | ||||||||||| |||||||||    
T  30963717 gcgtgcttgacttggcggagttttgggataggtgaccttct 30963677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 15619963 - 15620059
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgactt 452  Q
    |||||||||||| |||||||  |||| |||||||||||| ||| |||||||||| |   || ||||||||||||||||| |||| |||| |||||||    
T  15619963 cttataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaactccacaattaagcgtgcttgactt 15620059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 477
Target Start/End: Complemental strand, 32377739 - 32377676
Alignment:
Q  414 tcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||| ||||||||||||||||| | || |||||||| |||||||||||||||| ||||||    
T  32377739 tcattccaaaagaactccacagttaagcatgcttgacttggagcaattttgggataggtgacct 32377676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 18448038 - 18447957
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcat 398  Q
    ||||| |||||| ||| | |||||||| |||||| ||| |||||||||||| |||||||  || ||||||||||||||||||    
T  18448038 gaggccgtgtaggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcat 18447957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 32377921 - 32377876
Alignment:
Q  423 aagaactccacagttaaacgtgtttgacttgaagcaattttgggat 468  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  32377921 aagaactccacagttaagcgtgtttgacttggagcaattttgggat 32377876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 1953204 - 1953275
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggta 411  Q
    |||| |||||||||| | |||||||||| |||||||  |||| ||||||| |||||||| ||||||||||||    
T  1953204 catggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttctttttggta 1953275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 20502072 - 20502175
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||    || |||||||||||||| | || |||||||||   |||| |||||||||| |||| ||||    
T  20502072 catggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt-tttttggtagcccatttcataagaacttcacaattaa 20502170  T
Q  440 acgtg 444  Q
    |||||    
T  20502171 acgtg 20502175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 432
Target Start/End: Original strand, 8073946 - 8074033
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactcca 432  Q
    ||||||| || |||||||||||| |||||||  |||| || ||||||||||||| |||||| | |||   |||| |||||||||||||    
T  8073946 ttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactcca 8074033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 15639799 - 15639896
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||| ||||| |||||||  |||| ||||||||| || ||| |||||||||| |   || |||| |||||||||||| |||| |||| ||||||||    
T  15639799 cttataggaattgtttggtactacctatatcaacaacatacatcttctttttggaaacccaatccacaagaactccacaattaagcgtgcttgacttg 15639896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 2148 - 2011
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  2148 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2049  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  2048 gcgtgcttgacttggagcaattttgggatgggtgacct 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 41659202 - 41659065
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| | ||  ||||| ||||||||||||||||||||    
T  41659202 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataagaactccacagttaa 41659103  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     ||||||||||||| |||||||||||||||| ||||||    
T  41659102 gcgtgtttgacttggagcaattttgggataggtgacct 41659065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 10844712 - 10844575
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| ||||||||| || |||||||  |||| ||| |||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  10844712 catggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 10844613  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| ||||||||||||||||||||||| | ||||||    
T  10844612 gcgtgcttgacttgaagcaattttgggatgggtgacct 10844575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 12827355 - 12827214
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||| || |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  12827355 actacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 12827256  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  12827255 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 12827214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 22548646 - 22548509
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||||||| ||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||| ||||||||||||||    
T  22548646 catggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataataactccacagttaa 22548547  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  22548546 gcgtgcttgacttggagcaattttgggatgggtgacct 22548509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 22549092 - 22548955
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||| ||||||||||||||    
T  22549092 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaaactccacagttaa 22548993  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  22548992 gcgtgcttgacttggagcaattttgggatgggtgacct 22548955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 317 - 453
Target Start/End: Complemental strand, 6465030 - 6464894
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 416  Q
    ||||| |||||| |||  ||||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||  |||    
T  6465030 gaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctca 6464931  T
Q  417 ttccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||| |||||||||||||| |||| ||||||||    
T  6464930 ttccataacaactccacagttaagcgtgcttgacttg 6464894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 25144821 - 25144949
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||||||||||| || |||||||||||| |||||||  |||| ||||| |||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  25144821 catgattgaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 25144920  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||||||||||||    
T  25144921 gcgtgcttgacttggagcaattttgggat 25144949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 345 - 477
Target Start/End: Original strand, 25148021 - 25148153
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||||||||| ||||||   |||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||    
T  25148021 ttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtg 25148120  T
Q  445 tttgacttgaagcaattttgggatagatgacct 477  Q
     |||||||  |||||||||||||| | ||||||    
T  25148121 cttgactttgagcaattttgggatgggtgacct 25148153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 25147585 - 25147722
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| ||||||   |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||| ||||||    
T  25147585 catggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaa 25147684  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  25147685 tcgtgcttgacttggagcaattttgggatgggtgacct 25147722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 485
Target Start/End: Complemental strand, 27022439 - 27022290
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||| |||| |||||||||||| |||||||  |||| ||||||||| |||||| || |||| || |  ||||||||||||||||||||||    
T  27022439 actacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataagaactccacag 27022340  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    |||| |||| |||||||| |||||||||||||| | |||||| |||||||    
T  27022339 ttaagcgtgcttgacttggagcaattttgggatgggtgacctactggaaa 27022290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 22026428 - 22026556
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||| |||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  22026428 catggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 22026527  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| |||||| |||||||    
T  22026528 gcgtgcttgacttggagcaatattgggat 22026556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 17103130 - 17103258
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||   ||| |||||||||| ||||| ||||||| ||||  |||||||||||||||||||| |||||    
T  17103130 catggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatcttcttttcggtagctcattccataagaactccacggttaa 17103229  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||||||||||||    
T  17103230 gcgtgcttgacttggagcaattttgggat 17103258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 340 - 462
Target Start/End: Original strand, 27925948 - 27926070
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||||||  ||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||| ||||||||||||||||||||    
T  27925948 catggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaa 27926047  T
Q  440 acgtgtttgacttgaagcaattt 462  Q
     |||| |||||||| ||||||||    
T  27926048 gcgtgcttgacttggagcaattt 27926070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 2044103 - 2044220
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||| ||  |||| |||||||||||||||| ||||||||||||   |||||||||| ||||||||||    
T  2044103 actacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccacag 2044202  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  2044203 ttaagcgtgcttgacttg 2044220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 340 - 451
Target Start/End: Original strand, 10844932 - 10845043
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  10844932 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 10845031  T
Q  440 acgtgtttgact 451  Q
     |||| ||||||    
T  10845032 gcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 8080443 - 8080326
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  || ||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   ||||||||||||||| |||||    
T  8080443 actacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaacttcacag 8080344  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  8080343 ttaagcgtgcttgacttg 8080326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 347 - 481
Target Start/End: Complemental strand, 15567646 - 15567512
Alignment:
Q  347 gaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtt 446  Q
    |||||||| |||||||||||| ||||  |  || | || ||||||||| ||| |||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  15567646 gaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactccgcagttaatcgtgtt 15567547  T
Q  447 tgacttgaagcaattttgggatagatgaccttctg 481  Q
    ||||||| || | |||||| || ||||||||||||    
T  15567546 tgacttggagtagttttggaatggatgaccttctg 15567512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 345 - 477
Target Start/End: Complemental strand, 34308571 - 34308439
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||||||| | |||||||  |||| |||||||||||||||| ||||||| ||||    ||||||||||||||||||| |||| ||||    
T  34308571 ttgaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacacttaagcgtg 34308472  T
Q  445 tttgacttgaagcaattttgggatagatgacct 477  Q
     ||| |||| |||||||||| ||| | ||||||    
T  34308471 cttggcttggagcaattttgagatgggtgacct 34308439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 340 - 456
Target Start/End: Original strand, 41913019 - 41913135
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||| |||| |||||||||||| ||||||   |||| |||||||||||||| | ||||||||||||   ||||||||||||||||| |||||||    
T  41913019 catgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccataagaactccgcagttaa 41913118  T
Q  440 acgtgtttgacttgaag 456  Q
     |||| |||||||||||    
T  41913119 gcgtgcttgacttgaag 41913135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 336 - 481
Target Start/End: Original strand, 3745146 - 3745291
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||||||||| | ||| |||  |||| || |||||| |||||| ||||||||||||   |||||||||| ||||||||||    
T  3745146 actacatggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccacag 3745245  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgaccttctg 481  Q
    | || |||| |||||||  |||||||||||||| | ||||| ||||    
T  3745246 tcaagcgtgcttgacttagagcaattttgggatggctgaccatctg 3745291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 356 - 465
Target Start/End: Original strand, 12100756 - 12100865
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    ||||||||| || |||||||  |||| |||||| ||||||||| ||||||| ||||  ||||| |||||||||| ||||||||| |||| |||||||| |    
T  12100756 cttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggtagctcatttcataagaacttcacagttaagcgtgcttgacttgga 12100855  T
Q  456 gcaattttgg 465  Q
    ||||||||||    
T  12100856 gcaattttgg 12100865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 32292446 - 32292559
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| |||||||  | || |||||||||| ||||| ||||||||| ||   |||||||||||||||||||||||||    
T  32292446 catggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttctttttgctagcccattccataagaactccacagttaa 32292545  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  32292546 gcgtgcttgacttg 32292559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 436
Target Start/End: Complemental strand, 22840630 - 22840530
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| | ||| |||| |||||||||||| |||||||  | || |||||||||||||||| ||||||||| ||  ||||||||||||||||||||||    
T  22840630 actacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatcttctttttgttagctcattccataagaactccacag 22840531  T
Q  436 t 436  Q
    |    
T  22840530 t 22840530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 340 - 452
Target Start/End: Complemental strand, 27819343 - 27819231
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| || ||||||||| |||||||  |||| ||||||||| |||||| |||||||   ||  ||||||||||| ||||||||||||||    
T  27819343 catggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcaatagctcattccataaaaactccacagttaa 27819244  T
Q  440 acgtgtttgactt 452  Q
      |||||||||||    
T  27819243 gtgtgtttgactt 27819231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 453
Target Start/End: Complemental strand, 33852350 - 33852242
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||  |||||||||||| |||||||  |||| ||| ||||||||| || ||||||||||||   ||||||||||||||| |||| |||| ||||    
T  33852350 ttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttctttttggtagcccattccataagaacttcacaattaagcgtg 33852251  T
Q  445 tttgacttg 453  Q
     ||||||||    
T  33852250 cttgacttg 33852242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 465
Target Start/End: Complemental strand, 31283722 - 31283623
Alignment:
Q  366 ttatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgg 465  Q
    ||||||||||  |||| ||| |||||||||||| ||||||| ||||   |||||||||||||||||||||||||  ||| |||||||  |||||||||||    
T  31283722 ttatttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttgactttgagcaattttgg 31283623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 345 - 477
Target Start/End: Complemental strand, 34309031 - 34308895
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtat----caacaagatgcatattctttttggtatttcattccataagaactccacagttaaa 440  Q
    |||||||||| |||||||||| | |||||||  |||| |||    ||||||||||||| ||||||| ||||    ||||||||||||||||||||||||     
T  34309031 ttgaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacagttaag 34308932  T
Q  441 cgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| ||| |||| |||||||||| ||| | ||||||    
T  34308931 cgtgcttggcttggagcaattttgagatgggtgacct 34308895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 356 - 481
Target Start/End: Original strand, 1297072 - 1297197
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| |||||||  |||| || |||||||||  |||||||||| |||||  ||||  |||||||||||| ||||||  ||||||||||||||    
T  1297072 cttataagaattgtttggtactacctataccaacaagatttatattcttttcggtatcccattatataagaactccatagttaagtgtgtttgacttgaa 1297171  T
Q  456 gcaattttgggatagatgaccttctg 481  Q
    | ||| || ||||   ||||||||||    
T  1297172 gtaatctttggatgagtgaccttctg 1297197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 356 - 465
Target Start/End: Complemental strand, 21316190 - 21316081
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||| ||||||| |||||||  |||| ||||||||||||||||  ||||||  |||  ||||| ||||||||||||||||||||  ||| |||||||| |    
T  21316190 cttaaaagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttcataagaactccacagttaagtgtgcttgacttgga 21316091  T
Q  456 gcaattttgg 465  Q
    | ||||||||    
T  21316090 gtaattttgg 21316081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 28375151 - 28375042
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||||||||| |||||||||||| |||||||  ||||  ||||||||||||||| ||||||| ||||  || |||||||| | || || ||||||    
T  28375151 catgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttcttttcggtagctctttccataacagcttcatagttaa 28375052  T
Q  440 acgtgtttga 449  Q
     |||| ||||    
T  28375051 gcgtgcttga 28375042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 485
Target Start/End: Complemental strand, 10729736 - 10729638
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    |||||||||||| ||||||||||||    |||||||||| |||||||| ||||  ||| ||| |||||||||||||||||||   ||||||| ||||||    
T  10729736 aacaagatgcatcttctttttggtagcctattccataaggactccacaattaagggtgcttggcttgaagcaattttgggatgactgaccttatggaaa 10729638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 476
Target Start/End: Original strand, 34687929 - 34688015
Alignment:
Q  390 aagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacc 476  Q
    ||||||||| ||||||||||||  | |||||||||||| |||| ||||||| |||| ||||||| ||||||| ||| || |||||||    
T  34687929 aagatgcatcttctttttggtaggttattccataagaattccatagttaaatgtgtctgacttggagcaattatggtatggatgacc 34688015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 28453403 - 28453500
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||||||| |||  ||  |||| ||| |||||||||||| |||||| |||||   |||||||||||||||| |||||||| |||| ||||||||    
T  28453403 cttataagaattgttttatactacctatattaacaagatgcatcttctttatggtagcccattccataagaactctacagttaagcgtgcttgacttg 28453500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 411
Target Start/End: Complemental strand, 27021976 - 27021905
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggta 411  Q
    |||| |||||||||| |||||||||||| |||||||  || | |||||||||||||||| ||||||| ||||    
T  27021976 catggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttcttttcggta 27021905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 28912947 - 28912848
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||||||||| |||||| |||||||||| | || ||  | ||||||| ||||||||||| || |||||| |||  ||||| |||| ||||||||||||||    
T  28912947 catgattgaaagaagtcatataagaattgtctgatattatctgtatcgacaagatgcatcttatttttgatatcccattctataataactccacagttaa 28912848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 22705222 - 22705279
Alignment:
Q  341 atgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcat 398  Q
    ||||||||||||||  ||||||||||| |||||||  |||| ||||||||||||||||    
T  22705222 atgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcat 22705279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 452
Target Start/End: Complemental strand, 30527563 - 30527467
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgactt 452  Q
    |||||||||||| ||||||| ||| |  ||||| ||||| ||| ||||||| ||||   |||| ||||||||||||||||||||   ||||||||||    
T  30527563 cttataagaattgtttggtaccacttacatcaataagatacatcttcttttgggtagcccatttcataagaactccacagttaagattgtttgactt 30527467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 29117361 - 29117432
Alignment:
Q  416 attccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaaaa 487  Q
    ||||||| ||||||| ||| || |||||| |||||||| |||||||||||||||| | | ||| ||||||||    
T  29117361 attccatgagaactctacacttcaacgtgcttgacttggagcaattttgggataggtcatcttttggaaaaa 29117432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 29971448 - 29971409
Alignment:
Q  414 tcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  29971448 tcattccataaaaacttcacagttaaacgtgtttgacttg 29971409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 345 - 407
Target Start/End: Complemental strand, 15568097 - 15568035
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattcttttt 407  Q
    |||||||||| ||||||| |||| |||||||  |||| |||||||||||||||| || |||||    
T  15568097 ttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctttttttt 15568035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 453
Target Start/End: Complemental strand, 15819113 - 15819000
Alignment:
Q  339 acatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtta 438  Q
    ||||| |||||||||  |||| || |||| |||||||  || | |||||||| ||||||| ||||||| ||||   ||||||||||||||| ||||||||    
T  15819113 acatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaact-cacagtta 15819015  T
Q  439 aacgtgtttgacttg 453  Q
    ||  || ||||||||    
T  15819014 aatttgcttgacttg 15819000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 3744687 - 3744815
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| ||||  |  |||| || |||||| |||||  ||||||||||||   |||| ||||||||||| ||| ||||    
T  3744687 catggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataagaactctacaattaa 3744786  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     | |  || ||||  ||||||||||||||    
T  3744787 gctttattaactttgagcaattttgggat 3744815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 5e-36; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 2465778 - 2465919
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| ||||||||| || |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  2465778 actacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 2465877  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  2465878 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 2465919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 42515589 - 42515730
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||| | |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  42515589 actacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 42515688  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  42515689 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 42515730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 2941854 - 2941717
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| || ||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  2941854 catggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 2941755  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  2941754 gcgtgcttgacttggagcaattttgggatgggtgacct 2941717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 13125233 - 13125096
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| ||| |||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  13125233 catggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 13125134  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  13125133 gcgtgcttgacttggagcaattttgggatgggtgacct 13125096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 28495899 - 28496040
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||| | || ||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  28495899 actacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 28495998  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  28495999 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 28496040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 34405692 - 34405551
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| |||||||| ||||||| ||||||| ||||  ||||||||||||||||||||||    
T  34405692 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttcttttcggtagctcattccataagaactccacag 34405593  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  34405592 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 34405551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 42515141 - 42515254
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  42515141 catgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataagaactccacagttaa 42515240  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  42515241 gcgtgcttgacttg 42515254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 2465969 - 2466110
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| ||||||||| || |||||||  |||| |||||||||| ||||| ||||||| ||||  ||||||||||||||||||||||    
T  2465969 actacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctcattccataagaactccacag 2466068  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||| ||||| | ||||||    
T  2466069 ttaagcgtgcttgacttggagcaatttcgggatgggtgacct 2466110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 28495709 - 28495568
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| ||  ||   |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  28495709 actacatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatcttcttttaggtagctcattccataagaactccacag 28495610  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  28495609 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 28495568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 36422297 - 36422423
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||| ||||||||||||||||    
T  36422297 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacag 36422396  T
Q  436 ttaaacgtgtttgacttgaagcaattt 462  Q
    |||| |||| |||||||| ||||||||    
T  36422397 ttaagcgtgcttgacttggagcaattt 36422423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 356 - 477
Target Start/End: Original strand, 9125024 - 9125145
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||| |||||| | |    
T  9125024 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactcgga 9125123  T
Q  456 gcaattttgggatagatgacct 477  Q
    ||||||||||||| | ||||||    
T  9125124 gcaattttgggatgggtgacct 9125145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 35474222 - 35474105
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||| ||| |||||||||||| ||| |||  || | |||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  35474222 actacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatcttctttttggtagctcattccataagaactccacag 35474123  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||||||||||||    
T  35474122 ttaagcgtgtttgacttg 35474105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 336 - 462
Target Start/End: Complemental strand, 6719175 - 6719049
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||| ||    
T  6719175 actacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccagag 6719076  T
Q  436 ttaaacgtgtttgacttgaagcaattt 462  Q
    |||| |||| |||||||| || |||||    
T  6719075 ttaagcgtgcttgacttggagtaattt 6719049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 2193305 - 2193442
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| |||| || ||||  ||||| |||| |||||||||||||||    
T  2193305 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacagttaa 2193404  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||| ||| |||||||||||||| | ||||||    
T  2193405 gcgtgcttgatttggagcaattttgggatgggtgacct 2193442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 340 - 485
Target Start/End: Complemental strand, 5406685 - 5406540
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||||||  ||||||||||| |||||||  |||| |||||||||||||||| || ||||||||    ||  |||||||||||||||||||||    
T  5406685 catggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaactccacagttaa 5406586  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
     |||| |||||||  |||||||||||||| |||||| |||||||||    
T  5406585 gcgtgcttgactttgagcaattttgggatggatgactttctggaaa 5406540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 46425786 - 46425903
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||  ||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||| | ||||||||||||||||||||    
T  46425786 actacatggttgaaataaggcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactccacag 46425885  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  46425886 ttaagcgtgcttgacttg 46425903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 2189193 - 2189321
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||| |||| |||||||||||| ||||| |  |||| |||||||||||||||| ||||||| | ||  ||||| ||||||||||||||||||||    
T  2189193 catggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaa 2189292  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||||||||||||    
T  2189293 gcgtgcttgacttggagcaattttgggat 2189321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 345 - 449
Target Start/End: Complemental strand, 26421397 - 26421293
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| ||||||||||||  ||| ||  |||| ||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  26421397 ttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacagttaaacgtg 26421298  T
Q  445 tttga 449  Q
    |||||    
T  26421297 tttga 26421293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 346 - 453
Target Start/End: Original strand, 679872 - 679978
Alignment:
Q  346 tgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgt 445  Q
    ||||||||| |||||||||||| || ||||  |||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||     
T  679872 tgaaggaaggcttataagaattgtt-ggtactacctatatcaacaagatgcatattctttttggtagcccattccataagaactccacagttaagcgtgc 679970  T
Q  446 ttgacttg 453  Q
    ||||||||    
T  679971 ttgacttg 679978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 340 - 481
Target Start/End: Original strand, 20966100 - 20966241
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||||||| | |||||||||||||||| |||  |||| || |||||||||| ||||| |||| ||||  |||||||||||||||| |||||||||    
T  20966100 catgattgaaggatgacttataagaattattttgtaatacctataccaacaagatgtatattattttcggtagctcattccataagaacttcacagttaa 20966199  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctg 481  Q
    || ||  ||||||| | |||||||||||| | |||| |||||    
T  20966200 acatgcatgacttgtatcaattttgggatgggtgacattctg 20966241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 6747699 - 6747583
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||||||  ||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||    ||||||||| ||||||||||    
T  6747699 actacatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcctattccataaaaactccacag 6747600  T
Q  436 ttaaacgtgtttgactt 452  Q
    |||| |||| |||||||    
T  6747599 ttaagcgtgcttgactt 6747583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 477
Target Start/End: Original strand, 18833330 - 18833472
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    |||| |||| |||| ||||  |||||| ||||| ||| |||  |||| |||||||||||||||| ||||||| ||||  | ||| |||||||||||||||    
T  18833330 aactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttcttttcggtagctaattacataagaactccaca 18833429  T
Q  435 gttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||| ||||||||||||  |||||||||||||| | ||||||    
T  18833430 gttaagcgtgtttgactttgagcaattttgggatgggtgacct 18833472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 25182410 - 25182552
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||| ||| || |||| ||||  |||||||||||||||| |||||||||    
T  25182410 catggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaacttcacagttaa 25182509  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
      |||||||||||| || | | || |||| || ||||||||||    
T  25182510 gtgtgtttgacttggagtagtctttggatggaggaccttctgg 25182552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 9623273 - 9623369
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||||||| |||| || ||||| |||||||||||||||| ||||||  |||| ||||||| ||||||||||||||||||| |||||||||||||    
T  9623273 cttataagaattgtttgataccacctatatcaacaagatgcatcttctttc-ggtagttcattctataagaactccacagttaagcgtgtttgacttg 9623369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 317 - 453
Target Start/End: Complemental strand, 29039140 - 29039004
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 416  Q
    ||||| |||||||||| | |||||||| ||||| | || |||| ||||||| |||||||  |||| ||||||||| |||||| ||||||||| || | ||    
T  29039140 gaggccgtgtagatatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttctttttgataatcca 29039041  T
Q  417 ttccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||||||||| ||| |||| |||| ||||||||    
T  29039040 ttccataagaactctacatttaagcgtgcttgacttg 29039004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 11372505 - 11372628
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||||||||| |||||||  ||||||| ||||| ||||||| || |||||||||  |||  |||||||||||||| |||||| |  |    
T  11372505 ttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcatgttatttttggtagctcaaaccataagaactccaaagttaagcacg 11372604  T
Q  445 tttgacttgaagcaattttgggat 468  Q
    ||||||||  ||||||||||||||    
T  11372605 tttgacttatagcaattttgggat 11372628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 387 - 477
Target Start/End: Complemental strand, 7646528 - 7646438
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||||||| ||||||| ||||  |||||||||||||||| ||||||||| |||| |||||||| |||||||||||||| | ||||||    
T  7646528 aacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacct 7646438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 387 - 477
Target Start/End: Complemental strand, 13122555 - 13122465
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||| |||| ||| |||||||||||||| | ||||||    
T  13122555 aacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacct 13122465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 346 - 439
Target Start/End: Complemental strand, 11517480 - 11517387
Alignment:
Q  346 tgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||| |||||||||||| |||||||  |||| |||||||||||||||| | ||||| ||||  |||||||||||||||||| |||||||    
T  11517480 tgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatctacttttcggtagctcattccataagaactccgcagttaa 11517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 345 - 453
Target Start/End: Complemental strand, 35527213 - 35527105
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    ||||| |||| |||||||||||| ||||||   |||| ||||||||||||||||||||||||  ||| | ||||||||| ||||||||||||||| | ||    
T  35527213 ttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagtagtccattccataggaactccacagttaagcatg 35527114  T
Q  445 tttgacttg 453  Q
     ||||||||    
T  35527113 cttgacttg 35527105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 477
Target Start/End: Original strand, 7646514 - 7646601
Alignment:
Q  390 aagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||||||| || |||| ||||  |||||||||||||||||||||||||| |||| |||||||| |||||||||||||| | ||||||    
T  7646514 aagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacct 7646601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 453
Target Start/End: Complemental strand, 22529335 - 22529219
Alignment:
Q  337 ctacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagt 436  Q
    ||||||| |||||||||| |||||||||| | |||||||  | || ||| |||||||||||| |||||||  |||  ||||| || ||||||| ||||||    
T  22529335 ctacatggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcattacaaaagaacttcacagt 22529236  T
Q  437 taaacgtgtttgacttg 453  Q
    ||| |||||||||||||    
T  22529235 taagcgtgtttgacttg 22529219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 347 - 453
Target Start/End: Complemental strand, 2611742 - 2611636
Alignment:
Q  347 gaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtt 446  Q
    |||||||| |||||||||||| |||||||  | || || ||||||||||||| ||||||||||||   ||||| |||||||||||| |||||| |||| |    
T  2611742 gaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataagaactccatagttaagcgtgct 2611643  T
Q  447 tgacttg 453  Q
    | |||||    
T  2611642 ttacttg 2611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 43776313 - 43776262
Alignment:
Q  414 tcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgg 465  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  43776313 tcattccataagaactccacagttaagcgtgcttgacttggagcaattttgg 43776262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 429
Target Start/End: Original strand, 16192368 - 16192457
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaact 429  Q
    |||||||||| ||||  ||||||||||| |||||||  ||||  ||||||||||||||| ||| ||||||||   |||||||||||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaact 16192457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 452
Target Start/End: Complemental strand, 29357553 - 29357441
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||   ||||||||||| |||||||  | || |||||||||||||||| ||||||| | ||   | || |||||||||| |||||||||    
T  29357553 catggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataagaactacacagttaa 29357454  T
Q  440 acgtgtttgactt 452  Q
     ||||||||||||    
T  29357453 ccgtgtttgactt 29357441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 452
Target Start/End: Original strand, 37672226 - 37672321
Alignment:
Q  357 ttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgactt 452  Q
    |||||| |||| |||||||  || |||| ||||||||||||  ||||||||| || || ||| |||||||| | ||||||||| ||||||||||||    
T  37672226 ttataataattgtttggtactacttgtaccaacaagatgcaacttctttttgttagttgatttcataagaaatacacagttaagcgtgtttgactt 37672321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 477
Target Start/End: Original strand, 1628805 - 1628899
Alignment:
Q  383 tatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||||||||||| |||||||| | |   ||| |||||||||||||| ||||||  || |||| |||| |||||||||||||| | ||||||    
T  1628805 tatcaacaagatgcatcttcttttttgaagcccataccataagaactccatagttaagtgtatttggcttggagcaattttgggatgggtgacct 1628899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 7461400 - 7461336
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgactt 452  Q
    |||||||| ||| |||||||||||| ||||||| |||||||||| |||||||| ||||||| ||||    
T  7461400 aacaagatacatcttctttttggtagttcattc-ataagaactctacagttaagcgtgtttaactt 7461336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 448
Target Start/End: Complemental strand, 26421857 - 26421749
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||| ||| || ||||||||| || ||||   ||| || |||||||||| || ||||||| ||||   ||||||||||||||| |||||||||    
T  26421857 catggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagcccattccataagaactacacagttaa 26421758  T
Q  440 acgtgtttg 448  Q
     ||||||||    
T  26421757 gcgtgtttg 26421749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 444
Target Start/End: Complemental strand, 31406665 - 31406577
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    ||||| |||||| ||||||   |||| |||||||||||||||| ||||||| ||||   | || |||||||||||||||||||| ||||    
T  31406665 cttattagaattgtttggtgttacctatatcaacaagatgcatcttcttttcggtagcccgtttcataagaactccacagttaagcgtg 31406577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Original strand, 33316853 - 33316888
Alignment:
Q  421 ataagaactccacagttaaacgtgtttgacttgaag 456  Q
    |||||||||||||| |||||||||||||||||||||    
T  33316853 ataagaactccacaattaaacgtgtttgacttgaag 33316888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 26957677 - 26957603
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaa 391  Q
    ||||| |||||| |||  ||||||||| ||||| |||| |||||||||||| |||||||  |||| |||||||||    
T  26957677 gaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 5e-36; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 13150655 - 13150514
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  13150655 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 13150556  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  13150555 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 13150514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 31284373 - 31284236
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  31284373 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 31284274  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  31284273 gcgtgcttgacttggagcaattttgggatgggtgacct 31284236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 50347791 - 50347932
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||| || |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  50347791 actacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccacag 50347890  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  50347891 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 50347932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 28561795 - 28561923
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  28561795 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 28561894  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||||||||||||    
T  28561895 gcgtgcttgacttggagcaattttgggat 28561923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 11180135 - 11179994
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||| ||||||||||||||||    
T  11180135 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacag 11180036  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  11180035 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 11179994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 465
Target Start/End: Complemental strand, 13150200 - 13150071
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  ||||||||||||||||||||| |||||||  |||  ||||||||||||||||||||||    
T  13150200 actacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacag 13150101  T
Q  436 ttaaacgtgtttgacttgaagcaattttgg 465  Q
    |||| |||| |||||||| |||||||||||    
T  13150100 ttaagcgtgcttgacttggagcaattttgg 13150071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 32227322 - 32227181
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| ||| |||||||||||| ||||||||||||  ||||| ||||||||||||||||    
T  32227322 actacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataagaactccacag 32227223  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  32227222 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 32227181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 336 - 458
Target Start/End: Original strand, 39640982 - 39641104
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| ||||||||| || |||||||  |||| |||||| ||||||||| ||||||||||||  ||||||||||||||||||||||    
T  39640982 actacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccacag 39641081  T
Q  436 ttaaacgtgtttgacttgaagca 458  Q
    |||| ||||||||||||| ||||    
T  39641082 ttaagcgtgtttgacttggagca 39641104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 32227545 - 32227686
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  |||| ||| |||||||||||| ||||||| ||||  ||||| ||||||||||||||||    
T  32227545 actacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacag 32227644  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  32227645 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 32227686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 41472350 - 41472486
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  || | |||||||||||||||| ||||||| ||||  |||||||||||||||||||| |||||    
T  41472350 catggttgaaggaag-cttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataagaactccacggttaa 41472448  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||| |||||||||| |||||||||||| | ||||||    
T  41472449 acgtgcttgacttgaaacaattttgggatgggtgacct 41472486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 16811430 - 16811567
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| || ||||  |||| | |||||||||||||| ||||||| ||||  |||||||||||||| |||||||||||    
T  16811430 catggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatcttcttttcggtagctcattccataagaattccacagttaa 16811529  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  16811530 gcgtgcttgacttggagcaattttgggatgggtgacct 16811567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 25238785 - 25238668
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  | || |||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  25238785 actacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 25238686  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  25238685 ttaagcgtgcttgacttg 25238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 345 - 468
Target Start/End: Complemental strand, 32386826 - 32386703
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||||||||| |||||||  |||| ||| |||||||||||| |||||||  |||  | |||||||||||||||||||||||| ||||    
T  32386826 ttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattccataagaactccacagttaagcgtg 32386727  T
Q  445 tttgacttgaagcaattttgggat 468  Q
     |||||||| ||||||||||||||    
T  32386726 cttgacttggagcaattttgggat 32386703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 25230349 - 25230232
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| ||||||||||||||||||||  |||| |||||||||||| ||| ||||||||||||   ||||| |||||||||||||||    
T  25230349 actacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacag 25230250  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||  |||| ||||||||    
T  25230249 ttatgcgtgcttgacttg 25230232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 25237936 - 25237819
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| ||||||||||||||||||||  |||| |||||||||||| ||| ||||||||||||   ||||| |||||||||||||||    
T  25237936 actacatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacag 25237837  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||  |||| ||||||||    
T  25237836 ttatgcgtgcttgacttg 25237819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 345 - 453
Target Start/End: Complemental strand, 4067452 - 4067344
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| ||||||| |||| |||||||  |||| |||||||||||||||| ||||||||||||  ||||| |||||||||||||||||||| ||||    
T  4067452 ttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacagttaagcgtg 4067353  T
Q  445 tttgacttg 453  Q
     ||||||||    
T  4067352 cttgacttg 4067344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 323 - 453
Target Start/End: Complemental strand, 20885231 - 20885101
Alignment:
Q  323 gtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccat 422  Q
    |||||| ||| | |||||||| |||||||||| |||||||||||| |||| ||  |||| |||||||||||||||| |||||||| |||   ||||||||    
T  20885231 gtgtaggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccat 20885132  T
Q  423 aagaactccacagttaaacgtgtttgacttg 453  Q
    |||||||||||| |||| |||| ||||||||    
T  20885131 aagaactccacaattaagcgtgcttgacttg 20885101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 356 - 477
Target Start/End: Original strand, 8067345 - 8067466
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    |||||||||||| ||| |||  |||| |||||||||||||||| || |||| ||||  ||||||||||||||||||| |||||| |||| |||||||| |    
T  8067345 cttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccatagttaagcgtgcttgacttgga 8067444  T
Q  456 gcaattttgggatagatgacct 477  Q
    ||||||||||||| | ||||||    
T  8067445 gcaattttgggatgggtgacct 8067466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 348 - 477
Target Start/End: Original strand, 14814006 - 14814135
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgttt 447  Q
    ||||||| ||||||| |||| |||||||  |||| |||||| ||||||||| ||||||| ||||  || ||||||||||||||||||||||| |||| ||    
T  14814006 aaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttcttttcggtagctcgttccataagaactccacagttaagcgtgctt 14814105  T
Q  448 gacttgaagcaattttgggatagatgacct 477  Q
    |||||| |||||||||| ||| | ||||||    
T  14814106 gacttggagcaattttgtgatgggtgacct 14814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 348 - 477
Target Start/End: Original strand, 14820211 - 14820340
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgttt 447  Q
    ||||||| |||||||||||| |||||||  || | |||||||||||||||| || |||| ||||  || ||||||||||||||||||||||| |||| ||    
T  14820211 aaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtgctt 14820310  T
Q  448 gacttgaagcaattttgggatagatgacct 477  Q
    |||||| | |||||||||||| | ||||||    
T  14820311 gacttggaacaattttgggatgggtgacct 14820340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 25230806 - 25230689
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||||||  ||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||| |||     
T  25230806 actacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaa 25230707  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  25230706 ttaagcgtgcttgacttg 25230689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 25238393 - 25238276
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||||||  ||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||| |||     
T  25238393 actacatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaa 25238294  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  25238293 ttaagcgtgcttgacttg 25238276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 445
Target Start/End: Complemental strand, 25239178 - 25239069
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||| ||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  25239178 actatatggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacag 25239079  T
Q  436 ttaaacgtgt 445  Q
    |||| |||||    
T  25239078 ttaagcgtgt 25239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 30529732 - 30529849
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||| ||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   ||||||||||||||| || ||    
T  30529732 actacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaacttcatag 30529831  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  30529832 ttaagcgtgcttgacttg 30529849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 37045080 - 37045197
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||||||| ||||||||  |||||||||||| |||||||  |||| |||||||||| ||||| ||||||||||||    ||||||||||||||||||||    
T  37045080 actacatgaatgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttctttttggtaccctattccataagaactccacag 37045179  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  37045180 ttaagcgtgcttgacttg 37045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 39653213 - 39653350
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| || | ||  |||| |||||||||||||||| ||||||| ||||  ||||||||| ||||||||||||||||    
T  39653213 catggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttcttttcggtagctcattccatgagaactccacagttaa 39653312  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
      ||| |||||||| |||||||||||||| | ||||||    
T  39653313 gtgtgcttgacttggagcaattttgggatgggtgacct 39653350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 357 - 453
Target Start/End: Original strand, 2911161 - 2911257
Alignment:
Q  357 ttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    |||||| |||| |||| ||  |||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||    
T  2911161 ttataaaaattgtttgatattacctatatcaacaagatgcatattctttttggtagctcattccataagaactccacagttaagcgtgcttgacttg 2911257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 351 - 477
Target Start/End: Complemental strand, 27187416 - 27187290
Alignment:
Q  351 gaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgac 450  Q
    |||| |||||||||||| |||||||  |||| |||||  ||||||||| ||||||| ||||  ||||| |||||||||||||||||||| |||| |||||    
T  27187416 gaaggcttataagaattgtttggtactacctatatcactaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgac 27187317  T
Q  451 ttgaagcaattttgggatagatgacct 477  Q
    ||  |||||||||||||| | ||||||    
T  27187316 tttgagcaattttgggatgggtgacct 27187290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 340 - 481
Target Start/End: Original strand, 29224373 - 29224514
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| ||  |||||||||||| ||||||| ||||   ||  ||||||||||| |||| ||||    
T  29224373 catggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaacttcacaattaa 29224472  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctg 481  Q
     |||| |||||||| |||||||||||||| | ||||||||||    
T  29224473 gcgtgcttgacttggagcaattttgggatgggtgaccttctg 29224514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 436
Target Start/End: Complemental strand, 32797037 - 32796936
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    ||||||||| |||||| ||| |||||||||||| |||||||  |||| |||||||||||||||| |||||||| |||   ||||||||||||||||||||    
T  32797037 aactacatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccaca 32796938  T
Q  435 gt 436  Q
    ||    
T  32796937 gt 32796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 477
Target Start/End: Original strand, 16810951 - 16811111
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 416  Q
    ||||| ||||||||||   ||| |||| |||| ||||| |||||||||||| ||  |||  | || |||| ||||||||||| ||||||| ||||  |||    
T  16810951 gaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttcttttcggtagctca 16811050  T
Q  417 ttccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||||||||||| |||| ||||  ||| |||||||| |||||||||||||| | ||||||    
T  16811051 ttccataagaacttcacatttaagtgtgcttgacttgtagcaattttgggatgggtgacct 16811111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 357 - 453
Target Start/End: Original strand, 25248177 - 25248273
Alignment:
Q  357 ttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    ||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||   |||||||||| |||||||| ||| | |||| ||||||||    
T  25248177 ttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataataactccacggttcagcgtgcttgacttg 25248273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 348 - 468
Target Start/End: Original strand, 41474054 - 41474174
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgttt 447  Q
    ||||||| |||||||||||| |||| ||   ||| ||||||||||||  ||||||||||||||   |||||| |||| ||||||||||| || |||| ||    
T  41474054 aaggaagacttataagaattgtttgatacttcctatatcaacaagattgatattctttttggtggatcattctataaaaactccacagtcaagcgtgctt 41474153  T
Q  448 gacttgaagcaattttgggat 468  Q
    |||||| | ||||||||||||    
T  41474154 gacttggaacaattttgggat 41474174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 350 - 453
Target Start/End: Complemental strand, 25802635 - 25802532
Alignment:
Q  350 ggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttga 449  Q
    ||||| || ||||||||  |||||||  |||| |||||||||||||||| ||||||| | ||   ||||||||||||| ||||||||||| |||||||||    
T  25802635 ggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgtttga 25802536  T
Q  450 cttg 453  Q
    ||||    
T  25802535 cttg 25802532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 453
Target Start/End: Original strand, 7493930 - 7494043
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  || | |||||||||||||||| ||||||| ||||   ||  |||||||||||||||| ||||    
T  7493930 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatcttcttttcggtagcccaaaccataagaactccacatttaa 7494029  T
Q  440 acgtgtttgacttg 453  Q
     | || ||||||||    
T  7494030 gcatgcttgacttg 7494043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 26310086 - 26309958
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||| |  ||||||||||| |||| ||  || | || ||| ||||||||| |||||| |||||  ||||||||| ||||||| ||||||||    
T  26310086 catggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttctttatggtagctcattccattagaactcgacagttaa 26309987  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
    | || |||||||| || ||||||||||||    
T  26309986 atgtatttgacttaaaacaattttgggat 26309958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 452
Target Start/End: Original strand, 7477240 - 7477352
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  || | |||||||||||| ||| ||||||| ||||   ||  |||||||||||||||| ||||    
T  7477240 catggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcttttcggtagcccaaaccataagaactccacatttaa 7477339  T
Q  440 acgtgtttgactt 452  Q
     | || |||||||    
T  7477340 gcatgcttgactt 7477352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 15377412 - 15377475
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| ||||||||||||||||| ||| |||||||| | |||||||||||| | |||||||||||    
T  15377412 ccattagaactccacagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgg 15377475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 478
Target Start/End: Complemental strand, 53150862 - 53150771
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    ||||||||||||||| |||| ||||    ||| |||||||||| ||||||||| |||| || ||||| |||||||||||||| | |||||||    
T  53150862 aacaagatgcatatttttttcggtagccaatttcataagaacttcacagttaaccgtgcttaacttggagcaattttgggatgggtgacctt 53150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 453
Target Start/End: Complemental strand, 25803101 - 25802988
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||| ||| ||| |||||||| |||||||  |||| ||  ||||||||| || ||||||| |||||  |||| ||||||||||||  ||||||    
T  25803101 catggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatcttcttttcggtatcccatttcataagaactccgtagttaa 25803002  T
Q  440 acgtgtttgacttg 453  Q
     |||| ||||||||    
T  25803001 gcgtgcttgacttg 25802988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 15388271 - 15388334
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| ||||||||| ||||||| ||| |||||||| | |||||||||||| | |||||||||||    
T  15388271 ccatcagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgg 15388334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 15392638 - 15392701
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| ||||||||| ||||||| ||| |||||||| | |||||||||||| | |||||||||||    
T  15392638 ccatcagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgg 15392701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 15405674 - 15405737
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| ||||||||| ||||||| ||| |||||||| | |||||||||||| | |||||||||||    
T  15405674 ccattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgg 15405737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 15417499 - 15417562
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| ||||||||| ||||||| ||| |||||||| | |||||||||||| | |||||||||||    
T  15417499 ccattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgg 15417562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 452
Target Start/End: Complemental strand, 31104049 - 31103943
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggta--tttcattccataagaactccacagttaaacgtgt 445  Q
    ||||||| |||||||||||| |||| ||  | || || |||| |||||||| ||||||||||||  | |||||||||||||||| |||| ||||  || |    
T  31104049 aaggaagacttataagaattgtttgatactatctataccaactagatgcattttctttttggtagctctcattccataagaacttcacatttaagtgtct 31103950  T
Q  446 ttgactt 452  Q
    |||||||    
T  31103949 ttgactt 31103943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 485
Target Start/End: Original strand, 3899929 - 3899994
Alignment:
Q  420 cataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    ||||||||||||||| | || | || |||||||| ||||||||||| || | ||||||||||||||    
T  3899929 cataagaactccacaataaagcatgcttgacttggagcaattttggtatgggtgaccttctggaaa 3899994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 16452034 - 16451893
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||||||||||| || ||||  |||| |||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  16452034 actacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacag 16451935  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  16451934 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 16451893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 16461187 - 16461046
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||||||||||| || ||||  |||| |||||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  16461187 actacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacag 16461088  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  16461087 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 16461046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20054633 - 20054496
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20054633 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054534  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20054533 gcgtgcttgacttggagcaattttgggatgggtgacct 20054496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20055089 - 20054952
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20055089 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054990  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20054989 gcgtgcttgacttggagcaattttgggatgggtgacct 20054952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20055545 - 20055408
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20055545 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20055446  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20055445 gcgtgcttgacttggagcaattttgggatgggtgacct 20055408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20056001 - 20055864
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20056001 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20055902  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20055901 gcgtgcttgacttggagcaattttgggatgggtgacct 20055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20056457 - 20056320
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20056457 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20056358  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20056357 gcgtgcttgacttggagcaattttgggatgggtgacct 20056320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20057360 - 20057223
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20057360 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20057261  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20057260 gcgtgcttgacttggagcaattttgggatgggtgacct 20057223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 345 - 477
Target Start/End: Complemental strand, 20056908 - 20056776
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| ||||| |||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||| ||||    
T  20056908 ttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 20056809  T
Q  445 tttgacttgaagcaattttgggatagatgacct 477  Q
    ||||||||| |||||||||||||| | ||||||    
T  20056808 tttgacttggagcaattttgggatgggtgacct 20056776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 12883573 - 12883715
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||  ||||||||||| ||||||||||||||    
T  12883573 catgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaaaactccacagttaa 12883672  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
      ||||||||||||||| | |||| |||| |||||||| ||||    
T  12883673 gtgtgtttgacttgaagtagtttttggatggatgacctactgg 12883715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20054177 - 20054040
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20054177 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20054078  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||| | |||||||||||||| | ||||||    
T  20054077 gcgtgcttgactaggagcaattttgggatgggtgacct 20054040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20057816 - 20057679
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||| |||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20057816 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20057717  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  20057716 gcgtgcttgacttggagcaattttgggatgggtgacct 20057679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 50002804 - 50002667
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||  ||||||||||| ||||||    
T  50002804 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccatagttaa 50002705  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     ||||||||||||| |||||||||||||| ||||||||    
T  50002704 gcgtgtttgacttggagcaattttgggatggatgacct 50002667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 465
Target Start/End: Original strand, 52250251 - 52250380
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| | |||||||| |||||||||||| || ||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  52250251 actacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 52250350  T
Q  436 ttaaacgtgtttgacttgaagcaattttgg 465  Q
    |||| |||| ||||||||||||||||||||    
T  52250351 ttaagcgtgcttgacttgaagcaattttgg 52250380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 336 - 468
Target Start/End: Complemental strand, 50002386 - 50002254
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  50002386 actacatggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactccacag 50002287  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggat 468  Q
    || |  ||| |||||||| ||||||||||||||    
T  50002286 ttgagtgtgcttgacttggagcaattttgggat 50002254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 38340955 - 38341097
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||| ||| ||||  |||||||||||||||| |||||||||    
T  38340955 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataagaacttcacagttaa 38341054  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
     |||| |||||||| |||||||||||||| | |||||| ||||    
T  38341055 gcgtgcttgacttggagcaattttgggatgggtgacctactgg 38341097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 20845758 - 20845621
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||| ||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20845758 catggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20845659  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| || ||||||||||| | ||||||    
T  20845658 gcgtgcttgacttggagaaattttgggatgggtgacct 20845621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 345 - 477
Target Start/End: Complemental strand, 46693827 - 46693695
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| ||||||| |||| |||||||  |||| |||||||||||||||| ||||||| ||||| ||||| ||||| |||||||||||||| ||||    
T  46693827 ttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaagcgtg 46693728  T
Q  445 tttgacttgaagcaattttgggatagatgacct 477  Q
     |||||||| |||||||||||||| | ||||||    
T  46693727 cttgacttggagcaattttgggatgggtgacct 46693695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 340 - 477
Target Start/End: Complemental strand, 35759705 - 35759568
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||||||||||||| || ||||||    
T  35759705 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaa 35759606  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||| |||||||| ||| |||||||||| | ||||||    
T  35759605 acgtgcttgacttggagctattttgggattggtgacct 35759568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 35761011 - 35760883
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||||||||  ||||||||| ||||||||  ||||||    
T  35761011 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgagaactccgtagttaa 35760912  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||||||||||||    
T  35760911 gcgtgcttgacttggagcaattttgggat 35760883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 346 - 477
Target Start/End: Complemental strand, 20060431 - 20060300
Alignment:
Q  346 tgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgt 445  Q
    ||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||  |||     
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgc 20060332  T
Q  446 ttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||| | |||||||||||| | ||||||    
T  20060331 ttgacttggatcaattttgggatgggtgacct 20060300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 31822764 - 31822623
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| ||||||||||  |||||||||||||||||||  || | ||||||||| |||||| ||||||| ||||  ||| |||| |||||||||||||    
T  31822764 actacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaagaactccacag 31822665  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| ||| ||||||||| | |||||||||||| || |||||    
T  31822664 ttaagcgtttttgacttggaacaattttgggatggacgacct 31822623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 43057624 - 43057507
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| ||| |||||||||||| ||||||| ||||   |||||||||||||||||||||    
T  43057624 actacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacag 43057525  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  43057524 ttaagcgtgattgacttg 43057507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 345 - 477
Target Start/End: Complemental strand, 51372966 - 51372834
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||||||||| ||| |||  |||| |||| ||||||||||| || |||| ||||  |||||||||||||||||||||||||| ||||    
T  51372966 ttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatcttattttcggtagctcattccataagaactccacagttaagcgtg 51372867  T
Q  445 tttgacttgaagcaattttgggatagatgacct 477  Q
     |||||||  |||||||||||||| | ||||||    
T  51372866 cttgactttgagcaattttgggatgggtgacct 51372834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 452
Target Start/End: Complemental strand, 43057184 - 43057050
Alignment:
Q  318 aggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcat 417  Q
    |||| |||||| ||| | |||||||| |||||||||| |||| ||||||| |||| ||  |||| |||||||||||||||| ||||||| ||||   |||    
T  43057184 aggccgtgtaggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccat 43057085  T
Q  418 tccataagaactccacagttaaacgtgtttgactt 452  Q
    |||||||||||||||||||||| |||| |||||||    
T  43057084 tccataagaactccacagttaagcgtgattgactt 43057050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 340 - 440
Target Start/End: Original strand, 2328364 - 2328464
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| ||| |||||||||||| ||||||||||||   |||||||||||||||||||||||||    
T  2328364 catggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 2328463  T
Q  440 a 440  Q
    |    
T  2328464 a 2328464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 52250641 - 52250729
Alignment:
Q  389 caagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||||||    
T  52250641 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacct 52250729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 477
Target Start/End: Original strand, 52250978 - 52251066
Alignment:
Q  389 caagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||||||    
T  52250978 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacct 52251066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 20061288 - 20061189
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||  |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  20061288 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 20061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 478
Target Start/End: Original strand, 16907278 - 16907421
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    |||| |||| ||||| |||| |||||||||||| |||||||  |||| |||||||||||| ||| |||||||  ||  | ||||| | |||||||||| |    
T  16907278 aactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctacaagaactccata 16907377  T
Q  435 gttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    ||||| ||||||||||||| |||||||||| ||| | |||||||    
T  16907378 gttaagcgtgtttgacttggagcaattttgagatgggtgacctt 16907421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 7548136 - 7548253
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||||||||| ||||||| ||||||| |||| |||||||  | || |||||||||||||||||||||||||||||   ||||  ||||||||||||||     
T  7548136 actacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataagaactccacaa 7548235  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||  ||||||||    
T  7548236 ttaagcgtacttgacttg 7548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 345 - 453
Target Start/End: Complemental strand, 30873042 - 30872934
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| ||| |||||||| |||| ||  |||| |||||||||||||||| |||||||||||| | ||||| |||||||||||||| |||| | ||    
T  30873042 ttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatcttctttttggtagtccattctataagaactccacaattaagcatg 30872943  T
Q  445 tttgacttg 453  Q
     ||||||||    
T  30872942 cttgacttg 30872934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 453
Target Start/End: Original strand, 12728039 - 12728154
Alignment:
Q  339 acatgattgaaggaagtcttataagaattatttggtagca-cctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtt 437  Q
    ||||| |||||||||| |||||||||||| ||||||  |  ||| |||||||||||||||| ||||||| ||||   |||||||||||||||||||||||    
T  12728039 acatggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactccacagtt 12728138  T
Q  438 aaacgtgtttgacttg 453  Q
    || | || ||||||||    
T  12728139 aagcatgcttgacttg 12728154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 2634992 - 2635086
Alignment:
Q  359 ataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttg 453  Q
    ||||||||| |||||||  |||| || ||||||||||||| ||||||| ||||  |||||| ||||||||||||||||||| |||||||| ||||    
T  2634992 ataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagctcattcaataagaactccacagttaagcgtgtttggcttg 2635086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 468
Target Start/End: Complemental strand, 16440678 - 16440548
Alignment:
Q  338 tacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtt 437  Q
    |||||| |||||| ||| |||||||||| | |||| ||  |||  || ||||||||||||||||||||||||||  |||||| |||| |||| || ||||    
T  16440678 tacatggttgaagaaagacttataagaactgtttgctactaccgataacaacaagatgcatattctttttggtagctcattctataataacttcaaagtt 16440579  T
Q  438 aaacgtgtttgacttgaagcaattttgggat 468  Q
    ||  ||| |||||| ||||||||||||||||    
T  16440578 aagtgtgattgactcgaagcaattttgggat 16440548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 356 - 477
Target Start/End: Complemental strand, 50003156 - 50003035
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaa 455  Q
    ||||||| |||| || ||||  |||| |||||||||||||||| |||||||  |||  |||||||| ||||||| ||||||||| |||| |||||||| |    
T  50003156 cttataataattgttgggtactacctatatcaacaagatgcatcttcttttcagtagctcattccaaaagaacttcacagttaagcgtgcttgacttgga 50003057  T
Q  456 gcaattttgggatagatgacct 477  Q
    |||||||| |||| | ||||||    
T  50003056 gcaatttttggatgggtgacct 50003035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 478
Target Start/End: Original strand, 8278066 - 8278144
Alignment:
Q  400 ttctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    |||||||||||| | |||| |||||  ||||||||||||| |||| ||||||||||||||||||||||| | |||||||    
T  8278066 ttctttttggtagtccatttcataaagactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctt 8278144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 485
Target Start/End: Original strand, 23180775 - 23180924
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    ||||| || |||||||||   |||||||||||  ||||||  |||| ||||||||||||| || |||| || | ||   ||||||||||||| ||||||     
T  23180775 actacgtggttgaaggaatgattataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattccacaa 23180874  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    |||| |||| |||||||| || ||||||||||| | | ||||||||||||    
T  23180875 ttaagcgtgcttgacttggagaaattttgggatgggttaccttctggaaa 23180924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 480
Target Start/End: Complemental strand, 843030 - 842890
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||||||||||||| | |||||||| |||||||  | |  |  ||||||||||||| ||||||||| ||  || |  ||||||||||| |||||| |    
T  843030 catgattgaaggaagtcgtgtaagaattgtttggtactatccattccaacaagatgcatgttctttttgatagatcgtcacataagaactcaacagttga 842931  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttct 480  Q
    ||||| |||||||  | ||||||||| |||||  |||||||    
T  842930 acgtgcttgactttgaacaattttggaatagacaaccttct 842890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 478
Target Start/End: Complemental strand, 7229997 - 7229902
Alignment:
Q  383 tatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacctt 478  Q
    |||||||| || |||| ||| ||| |||| |||||| ||||||||||||| || ||| | ||||||||||| ||||||||| |||| | |||||||    
T  7229997 tatcaacacgaagcatcttcatttcggtagttcattacataagaactccatagataagcatgtttgacttggagcaattttaggattggtgacctt 7229902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 345 - 468
Target Start/End: Complemental strand, 16410815 - 16410692
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||  ||||||||||||||||  ||  |||  || ||||||||||||| || |||||||||    |||| | ||||||| || |||||||| ||    
T  16410815 ttgaaggaaagcttataagaattatttactactaccaataccaacaagatgcatcttgtttttggtagcctattctagaagaacttcaaagttaaacatg 16410716  T
Q  445 tttgacttgaagcaattttgggat 468  Q
    ||||||||| ||||| ||||||||    
T  16410715 tttgacttggagcaagtttgggat 16410692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 31823161 - 31823097
Alignment:
Q  360 taagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataa 424  Q
    ||||||||||||||||  |||| |||||| || |||||| ||||||||||||  |||||||||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctttttggtagctcattccataa 31823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 2634515 - 2634657
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    ||||||| ||||||| |||  ||||||| |||||||  | || ||  |||||||||||| ||||||| | || |  |||| ||||||||| ||| |||||    
T  2634515 catgattaaaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttcttttcgatagtctattcaataagaacttcactgttaa 2634614  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    ||||| |||||||| || | | || |||| |||||| ||||||    
T  2634615 acgtgcttgacttggagtagtctttggatggatgacattctgg 2634657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 1269 - 1406
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| ||| |||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  1269 catggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 1368  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  1369 gcgtgcttgacttggagcaattttgggatgggtgacct 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 336 - 465
Target Start/End: Original strand, 154802 - 154931
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| || ||||  ||||||||||||||||||||| |||||||  |||  ||||||||||||||||||||||    
T  154802 actacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacag 154901  T
Q  436 ttaaacgtgtttgacttgaagcaattttgg 465  Q
    |||| |||| |||||||| |||||||||||    
T  154902 ttaagcgtgcttgacttggagcaattttgg 154931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 345 - 468
Target Start/End: Original strand, 105774 - 105897
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||| |||||||||||| |||||||  |||| ||||||||| |||||| ||||||| ||||  |||||||||||||||||||||||||| ||||    
T  105774 ttgaaggaaggcttataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtg 105873  T
Q  445 tttgacttgaagcaattttgggat 468  Q
     |||||||| ||||||||||||||    
T  105874 cttgacttggagcaattttgggat 105897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 19015 - 19152
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||| ||| ||||||| ||||  ||||| ||||||||||||||||||||    
T  19015 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaa 19114  T
Q  440 acgtgtttgacttgaagcaattttgggatagatgacct 477  Q
     |||| |||||||| |||||||||||||| | ||||||    
T  19115 gcgtgcttgacttggagcaattttgggatgggtgacct 19152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 2311 - 2170
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  | ||||||||||||||| | ||    
T  2311 actacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactcaatag 2212  T
Q  436 ttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||| |||||||| |||||||||||||| | ||||||    
T  2211 ttaagcgtgcttgacttggagcaattttgggatgggtgacct 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 107560 - 107432
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||| ||  |||  |||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||    
T  107560 catggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaa 107461  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||||||||||||    
T  107460 gcgtgcttgacttggagcaattttgggat 107432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 65; Significance: 3e-28; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 162775 - 162647
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| |||||||||| |||||||||||| |||||||  |||| ||| |||||||||||| ||||||| ||||  |||||||||||||||||| |||||||    
T  162775 catggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccgcagttaa 162676  T
Q  440 acgtgtttgacttgaagcaattttgggat 468  Q
     |||| |||||||| ||||| ||||||||    
T  162675 gcgtgcttgacttggagcaactttgggat 162647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 163181 - 163094
Alignment:
Q  390 aagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||||||| || |||| ||||  |||||||||||||||||||||||||| |||| |||||||| |||||||||||||| | ||||||    
T  163181 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacct 163094  T

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Target: scaffold0022; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 477
Target Start/End: Original strand, 163167 - 163257
Alignment:
Q  387 aacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||||||||||| ||||||| ||||  ||||||  |||||| ||||||||||| |||| |||||||| |||||||||||||| | ||||||    
T  163167 aacaagatgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacct 163257  T

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Target: scaffold0022; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 345 - 438
Target Start/End: Complemental strand, 69907 - 69814
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagtta 438  Q
    |||||||||  ||||||| |||| |||||||  |||| |||||||| ||||||| || ||||   ||  |||||||||||||||||||||||||    
T  69907 ttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccataagaactccacagtta 69814  T

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Target: scaffold0018 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 348 - 465
Target Start/End: Original strand, 10357 - 10474
Alignment:
Q  348 aaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgttt 447  Q
    ||||||| |||||||||||| ||| |||  |||| |||||||||||||||| || |||| ||||  |||||||||||||||||||||||||| |||| ||    
T  10357 aaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgctt 10456  T
Q  448 gacttgaagcaattttgg 465  Q
    |||||| |||||||||||    
T  10457 gacttggagcaattttgg 10474  T

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Target: scaffold0047 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 317 - 453
Target Start/End: Complemental strand, 18254 - 18119
Alignment:
Q  317 gaggcagtgtagatatataactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttca 416  Q
    ||||| |||||| ||| | |||||||  |||||||||| |||||||||||| |||| ||  |||| |||||||||||||||| || |||||||||  | |    
T  18254 gaggccgtgtaggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagctaa 18156  T
Q  417 ttccataagaactccacagttaaacgtgtttgacttg 453  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  18155 ttccataagaactccacagttaagcgtgcttgacttg 18119  T

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Target: scaffold0047; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 336 - 453
Target Start/End: Complemental strand, 17699 - 17582
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacag 435  Q
    |||||||| |||||||||  |||||||||||| |||||||  |||| |||||||| |||| || ||||||||||||  ||| | ||||||||||||||||    
T  17699 actacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaactccacag 17600  T
Q  436 ttaaacgtgtttgacttg 453  Q
    |||| |||| ||||||||    
T  17599 ttaagcgtgcttgacttg 17582  T

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Target: scaffold0389 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 13592 - 13493
Alignment:
Q  378 acctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    |||| |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||| |||| |||||||  |||||||||||||| | ||||||    
T  13592 acctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacct 13493  T

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Target: scaffold0557 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 2149 - 2253
Alignment:
Q  335 aactacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccaca 434  Q
    ||||||||| |||||||||| |||||||||||| |||||||   ||| ||| |||||||||||| ||||||||||||   |||||| |||||||||||||    
T  2149 aactacatggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccaca 2248  T
Q  435 gttaa 439  Q
    |||||    
T  2249 gttaa 2253  T

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Target: scaffold0277 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 390 - 477
Target Start/End: Complemental strand, 14749 - 14662
Alignment:
Q  390 aagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgacct 477  Q
    ||||||||| || |||| ||||  |||||||||||||||||||||||||| |||| |||||||| |||||||||||||| | ||||||    
T  14749 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacct 14662  T

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Target: scaffold0333 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 462
Target Start/End: Original strand, 4610 - 4732
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaa 439  Q
    |||| ||||||||||  ||| ||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  |||||  |||||||||||||||||||    
T  4610 catggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattttataagaactccacagttaa 4709  T
Q  440 acgtgtttgacttgaagcaattt 462  Q
      ||| || ||||| ||||||||    
T  4710 gtgtgcttaacttggagcaattt 4732  T

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Target: scaffold0333; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 462
Target Start/End: Original strand, 5091 - 5192
Alignment:
Q  361 aagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgacttgaagcaat 460  Q
    ||||||| |||||||  |||| ||| |||||||||||| ||||||| ||||  ||||| |||||||||||||||||||| |||| || ||||| ||||||    
T  5091 aagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttaacttggagcaat 5190  T
Q  461 tt 462  Q
    ||    
T  5191 tt 5192  T

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Target: scaffold0391 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 345 - 453
Target Start/End: Original strand, 14795 - 14903
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtg 444  Q
    |||||||||  |||||||||||| |||||||  |||| |||||| |||||||||  |||||| |||| ||||||  ||||||||| ||||||||| | ||    
T  14795 ttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtcttttcggtaattcattgaataagaacttcacagttaagcatg 14894  T
Q  445 tttgacttg 453  Q
    |||||||||    
T  14895 tttgacttg 14903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 411
Target Start/End: Complemental strand, 4074 - 4008
Alignment:
Q  345 ttgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggta 411  Q
    |||||||||  |||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  4074 ttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttctttttggta 4008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000004; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 245131 - 245200
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattcttt 405  Q
    |||||||| ||||||| || |||||||||||| |||||||  |||| |||||||||||||||| ||||||    
T  245131 actacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttt 245200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 450
Target Start/End: Original strand, 245580 - 245674
Alignment:
Q  356 cttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaaacgtgtttgac 450  Q
    |||||||||||| |||||||  |||| |||||||||||||||| |||||||  |||    |  ||||||||||||||||||||| |||| |||||    
T  245580 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtgcttgac 245674  T

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Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Original strand, 245676 - 245719
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattt 462  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||    
T  245676 ccataagaactccacagttaagcgtgcttgacttggagcaattt 245719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 403
Target Start/End: Original strand, 23722 - 23785
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattct 403  Q
    |||| |||||||||| |||||||||||| |||||||  |||| |||||||||||||||| ||||    
T  23722 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 485
Target Start/End: Original strand, 7070 - 7136
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctggaaa 485  Q
    ||||||||||||||||||||| | || |||||||| ||||||||||| || | ||||||| ||||||    
T  7070 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgggtgaccttttggaaa 7136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 408
Target Start/End: Complemental strand, 142371 - 142303
Alignment:
Q  340 catgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttg 408  Q
    |||| |||||||||   ||||||||||| |||||||  |||| |||||||||||||||| |||||||||    
T  142371 catggttgaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttttg 142303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 395
Target Start/End: Original strand, 45431 - 45490
Alignment:
Q  336 actacatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatg 395  Q
    |||||||  |||||||||| ||||| ||||||||||||||  |||| |||||||||||||    
T  45431 actacattgttgaaggaagacttatgagaattatttggtactacctatatcaacaagatg 45490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 482
Target Start/End: Complemental strand, 44739 - 44676
Alignment:
Q  419 ccataagaactccacagttaaacgtgtttgacttgaagcaattttgggatagatgaccttctgg 482  Q
    |||| ||||||||| ||||||| ||| |||||||| | |||||||||||| | |||||||||||    
T  44739 ccattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgg 44676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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