View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12946_high_5 (Length: 241)
Name: NF12946_high_5
Description: NF12946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12946_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 10286810 - 10287035
Alignment:
| Q |
1 |
attggagttttggaatttttaaattgtgaaaaatctgaaattatagatattttttgaatatttattgtaaaaacatgaagagcaaattaaaagtgagatt |
100 |
Q |
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| T |
10286810 |
attggagttttggagtttttaaattgtgaaaaatctgaaattatagattttttttgaatgtttattgtaaaaacatgaagagcaaattaaaagtgagatt |
10286909 |
T |
|
| Q |
101 |
tacaataaatgttgggtataagcacctagggaggagaggtaccatgttacagtatatttttcatttagttatctctttggaacatgggccctattcttca |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10286910 |
tacaataaatgttgggtataagaacctagggaggagaggtcccatgttacagtatatttttcatttagttatctctttggaacatgggccctattcttca |
10287009 |
T |
|
| Q |
201 |
tgtttgagcaattctttataaaaatt |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
10287010 |
tgtttgagcaattctttataaaaatt |
10287035 |
T |
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