View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12946_low_3 (Length: 298)

Name: NF12946_low_3
Description: NF12946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12946_low_3
NF12946_low_3
[»] chr3 (15 HSPs)
chr3 (11-298)||(2760010-2760297)
chr3 (11-298)||(2819353-2819643)
chr3 (16-298)||(2749791-2750073)
chr3 (33-298)||(5413682-5413947)
chr3 (34-298)||(2808063-2808327)
chr3 (26-298)||(2854880-2855152)
chr3 (16-298)||(2837660-2837942)
chr3 (11-298)||(2791116-2791397)
chr3 (18-298)||(2798157-2798437)
chr3 (12-298)||(2769865-2770145)
chr3 (34-114)||(3356444-3356524)
chr3 (31-90)||(3321307-3321366)
chr3 (11-92)||(3303000-3303081)
chr3 (16-92)||(3201934-3202010)
chr3 (26-114)||(3722512-3722600)
[»] scaffold0691 (1 HSPs)
scaffold0691 (16-298)||(5212-5494)
[»] chr1 (2 HSPs)
chr1 (204-298)||(11116748-11116841)
chr1 (34-85)||(4257719-4257770)


Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 11 - 298
Target Start/End: Complemental strand, 2760297 - 2760010
Alignment:
Q  11 catcatcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2760297 catcatcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttc 2760198  T
Q  111 aaagttaacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaaca 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2760197 aaagttaacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcagatttaaca 2760098  T
Q  211 aacccttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2760097 aacccttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggatataaaccaaaatacaaaatgcatggtt 2760010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 298
Target Start/End: Complemental strand, 2819643 - 2819353
Alignment:
Q  11 catcatcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttc 110  Q
    |||||||||||| |||||| || || || |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||  ||||| |||||    
T  2819643 catcatcatgcacacaatgacaaaatcttaaatcctttatttttgtaatgatcacttcccgcaataaatcatggacttgacatttatcaactttaccttc 2819544  T
Q  111 aaagttaacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcag---gttta 207  Q
    ||||| ||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |    || |    
T  2819543 aaagtcaacatccgagacttgaaccagacttctctgaatcagttcagacaagtactcctctgcaacttgctctggagttcttctcccaactgatatttga 2819444  T
Q  208 acaaacccttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||||||||||  ||||||| |||||| ||||| ||||  ||||||| | |||||||| || |||||||||||||||||||||||||    
T  2819443 acaaacccttcagctatccattgtcgagttattctcccatgactaatagcatagtcctctgggtataaaccaaaatacaaaatgcatggtt 2819353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 2750073 - 2749791
Alignment:
Q  16 tcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagt 115  Q
    |||||||| ||||| | |||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||| |||||||||     
T  2750073 tcatgcatgcaatgaccgaaatttaaatccttcatttttctaatgatcaattcccgcattaaatcatggacttgacatgtttgaacttttccttcaaagc 2749974  T
Q  116 taacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaaaccc 215  Q
     |||||  ||||| || || | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||   ||| ||||||||    
T  2749973 caacatttgagacctgaaccaaacttctctgaatcaattcagacaagtactcttctgcaacttgctctggagttcttctctcttccaattttacaaaccc 2749874  T
Q  216 ttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||  ||||||| |||||||||||||||||| ||| ||| | |||||||| || |||||||||||||||||||||||||    
T  2749873 ttcagctatccattgtcgagttaatctcctatgattaattgcatagtcctctgggtataaaccaaaatacaaaatgcatggtt 2749791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 33 - 298
Target Start/End: Complemental strand, 5413947 - 5413682
Alignment:
Q  33 gaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagttaacatccgagacttgg 132  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||| |||||||||  |||||  ||||| ||     
T  5413947 gaaacttaaatccttcatttttctaatgatcacttcccgcagtaaatcatgtacttgacatgtttgaacttttccttcaaagccaacatttgagacctga 5413848  T
Q  133 actagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaaacccttcagctgcccattgtt 232  Q
    || |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||| | |    || ||||||||||||||||  |||||||     
T  5413847 accagacttctttgaatcaattcagacaagtattcctctgcaacttgctccggagttcttctctcttgcaattgaacaaacccttcagctatccattgtc 5413748  T
Q  233 gagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||||||||||||| |||| || | ||||||||||| |||||||||||||||||||||||||    
T  5413747 gagttaatctcctatgattaataacatagtcctctggatataaaccaaaatacaaaatgcatggtt 5413682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 34 - 298
Target Start/End: Complemental strand, 2808327 - 2808063
Alignment:
Q  34 aaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagttaacatccgagacttgga 133  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | || ||||| |||||||||  |||||  ||||| || |    
T  2808327 aaacttaaatccttcattttcctaatgatcacttgccgcaataaatcatggacttgacatatttgaacttttccttcaaagccaacatttgagacctgaa 2808228  T
Q  134 ctagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaaacccttcagctgcccattgttg 233  Q
    | |||||||| |||||||||||| ||||||| |||||||| |  |||||||||||||||||| |||| | |||||||||||||||||||  ||||||| |    
T  2808227 ccagacttctgtgaatcaattcatacaagtattcctctgctatatgctctggagttcttctctcatctgatttaacaaacccttcagctatccattgtcg 2808128  T
Q  234 agttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||||| |||||| |||||   | ||||||||||| | |||||||||||||||||| ||||    
T  2808127 agttaatctcttatgattaatagagtagtcctctggatatataccaaaatacaaaatgcagggtt 2808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 298
Target Start/End: Original strand, 2854880 - 2855152
Alignment:
Q  26 aatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagttaacatccga 125  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||  |||||  ||    
T  2854880 aatgacagaaacttaaattcttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgttttaactttcccttcaaagccaacatttga 2854979  T
Q  126 gacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaaacccttcagctgcc 225  Q
    ||| || |  |||||||| ||||||||||| |||||||| ||||| || ||||||||   |||||||||| |||||| ||| |||||||| ||||||  |    
T  2854980 gacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagatttgacaaacccctcagctatc 2855079  T
Q  226 cattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||   ||||| ||||||||||| ||| |   ||||||||||||| | |||||||||||||||||||||||    
T  2855080 cattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggtt 2855152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 2837660 - 2837942
Alignment:
Q  16 tcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagt 115  Q
    ||||||| | |||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||||     
T  2837660 tcatgcacaaaatgacagaaacttaaattcttcatttttctaatgataacttcccgcaataaatcatggacttgacatgttttaactttcccttcaaagc 2837759  T
Q  116 taacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaaaccc 215  Q
     |||||  ||||| || |  |||||||| ||||||||||| |||||||| ||||| || ||||||||   |||||||||| |||||| ||| ||||||||    
T  2837760 caacatttgagacctgaatcagacttctgtgaatcaattctgacaagtattcctcagccacttgctccaaagttcttctctcatcagatttgacaaaccc 2837859  T
Q  216 ttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
     ||||||  ||||||   ||||| ||||||||||| ||| |   ||||||||||||| | |||||||||||||||||||||||    
T  2837860 ctcagctatccattgcctagttagtctcctatgattaatggagtaatcctctggatatataccaaaatacaaaatgcatggtt 2837942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 298
Target Start/End: Complemental strand, 2791397 - 2791116
Alignment:
Q  11 catcatcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttc 110  Q
    |||||||||||| |||||| |||||||| || |||||||||||||| ||||  |||||||  ||||||||||||||||||||||| || |||||||||||    
T  2791397 catcatcatgcacacaatgacagaaacttaagtccttcatttttctgatgagaacttcccagaataaatcatggacttgacatgtttgaactttcccttc 2791298  T
Q  111 aaagttaacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaaca 210  Q
    ||      ||   |||||||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| |  ||||| |    
T  2791297 aa------caattgagacttgaactaaacttctatgaatcaattcagacaagtactcctctgcaacttcctctggagttcgtctctcataacatttaata 2791204  T
Q  211 aacccttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||| |||  ||||||| ||||||||||| ||| || || || | | || |  ||||| | |||||||||||||||||||||||    
T  2791203 aacccttcggctatccattgtcgagttaatctcttattattaacagaatagtcttgaggatatataccaaaatacaaaatgcatggtt 2791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 2798437 - 2798157
Alignment:
Q  18 atgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagtta 117  Q
    ||||| |||||| ||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||| || ||||||||||||||   |    
T  2798437 atgcacacaatgacagaatcttaaatccttcatttttctaatgagcacttcccggaataaatcatggactcggcatgtttgaactttcccttcaaatcca 2798338  T
Q  118 acatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaaaccctt 217  Q
    ||||  ||||| || || | |||||| ||||| | ||||||||| ||||| |||||||||  |||| |||||| |||| |||||| ||||||||||||||    
T  2798337 acatttgagacctgaaccatacttctgtgaattagttcagacaaatactcttctgcaactatctcttgagttcgtctctcatcagatttaacaaaccctt 2798238  T
Q  218 cagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||  ||||||| ||||||||||| ||||||  |||| | | ||||  ||||| | | |||||||||||||||||||||    
T  2798237 cagctatccattgtcgagttaatctcttatgattgatagaatagtcctgaggatatatagcaaaatacaaaatgcatggtt 2798157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 298
Target Start/End: Complemental strand, 2770145 - 2769865
Alignment:
Q  12 atcatcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttca 111  Q
    ||||||||||| |||||| |||||||| || |||||||||||| ||||||  |||||| | ||||||||||||||||||||||| || | ||||||||||    
T  2770145 atcatcatgcacacaatgacagaaacttaagtccttcatttttttaatgaaaacttcctggaataaatcatggacttgacatgtttgaattttcccttca 2770046  T
Q  112 aagttaacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaa 211  Q
    |      ||   |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||  ||||| |||| |||| |||||| ||||| ||    
T  2770045 a------caattgagacttgaactaaacttctatgaatcaattcagacaagtactcctctgcaacttcttctggggttcgtctctcatcagatttaataa 2769952  T
Q  212 acccttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||||||  ||||||  | ||||||||| ||| || ||||| | | || |  ||||| | |||||||||||||||||||||||    
T  2769951 acccttcagctatccattgccgtgttaatctcttattattaatagaatagtcttgaggatatataccaaaatacaaaatgcatggtt 2769865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 3356444 - 3356524
Alignment:
Q  34 aaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaag 114  Q
    ||||| ||||| ||||||||| |||||| |||||| ||||| |||||||||||||||||| | |  |||||||| ||||||    
T  3356444 aaacttaaatctttcatttttttaatgaccacttcacgcaacaaatcatggacttgacatcttttaactttcccatcaaag 3356524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 3321307 - 3321366
Alignment:
Q  31 cagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttga 90  Q
    |||||||| ||||| ||||||||||||| ||||||||| ||||| |||||||| ||||||    
T  3321307 cagaaacttaaatctttcatttttctaaggatcacttcacgcaacaaatcatgaacttga 3321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 3303000 - 3303081
Alignment:
Q  11 catcatcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgaca 92  Q
    |||| ||||||||  |||| ||||||||   ||| ||||||||| ||||||||||||| ||||| | |||||||||||||||    
T  3303000 catcttcatgcattaaatgacagaaactttgatctttcatttttttaatgatcacttcacgcaacacatcatggacttgaca 3303081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 3202010 - 3201934
Alignment:
Q  16 tcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgaca 92  Q
    ||||||||  ||||||| || || ||||| | ||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  3202010 tcatgcattaaatggcaaaagcttaaatcttgcatttttctaaggatcacttcacgcaacaaattatggacttgaca 3201934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 3722600 - 3722512
Alignment:
Q  26 aatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaag 114  Q
    ||||||| ||||| ||||| ||||||||| |||| | || ||| | ||| |||||||||||||||||| | |  |||||||| ||||||    
T  3722600 aatggcaaaaactaaaatctttcatttttttaataaccatttcacacaacaaatcatggacttgacatcttttaactttcccatcaaag 3722512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0691 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 298
Target Start/End: Original strand, 5212 - 5494
Alignment:
Q  16 tcatgcatacaatggcagaaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatggacttgacatgtatgtactttcccttcaaagt 115  Q
    ||||||| |||||| || ||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||     
T  5212 tcatgcacacaatgacaaaaagttaaatccttcatttttctaatgatcacttcacgcaataaatcatggacttgacatgtttgaactttcccctcaaagc 5311  T
Q  116 taacatccgagacttggactagacttctctgaatcaattcagacaagtactcctctgcaacttgctctggagttcttctcccatcaggtttaacaaaccc 215  Q
     |||||  ||||| || || |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||  |||| |||||   |||||||||||    
T  5312 caacatttgagacctgaaccagacttctgtgaatcaattcagacaagtactcatctgcaacttgctcgggagtttgtctctcatcatacttaacaaaccc 5411  T
Q  216 ttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||  ||||||  ||||||||||| |||||| ||||| | | ||||||||||| | |||||||||||||||||||||||    
T  5412 ttcagctatccattgacgagttaatctcttatgattaatagaatagtcctctggatatataccaaaatacaaaatgcatggtt 5494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 11116748 - 11116841
Alignment:
Q  204 tttaacaaacccttcagctgcccattgttgagttaatctcctatgatgaatagcaaaatcctctggataaaaaccaaaatacaaaatgcatggtt 298  Q
    |||||||||||||||||||  |||| || ||||||||||||| |||| ||||||| | ||||||||||| | |||||||||||||||||||||||    
T  11116748 tttaacaaacccttcagctatccat-gtcgagttaatctcctgtgattaatagcatagtcctctggatatacaccaaaatacaaaatgcatggtt 11116841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 4257770 - 4257719
Alignment:
Q  34 aaactcaaatccttcatttttctaatgatcacttcccgcaataaatcatgga 85  Q
    ||||||||||||||||||||||| ||||||| ||| || || ||||||||||    
T  4257770 aaactcaaatccttcatttttctcatgatcatttctcgtaacaaatcatgga 4257719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University