View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12946_low_9 (Length: 206)
Name: NF12946_low_9
Description: NF12946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12946_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 26672388 - 26672540
Alignment:
| Q |
23 |
aaggcgcgtggaatgagaatggcgcgtgtgtatgaggaaggataataaaaagaagagaagagaatgtagatgggttagggaatcacgagaaaatgatgga |
122 |
Q |
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| T |
26672388 |
aaggcgcgtggaatgagaatggcgcgtgtgtatgaggaaggataataaaaagaagagaagagaatgtagatgggttagggaatcacgagaaaatgatgga |
26672487 |
T |
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| Q |
123 |
tgtttagattccttcttccttccgacactgtgttttgttcagctctgtctctg |
175 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26672488 |
tgtttagattccttcttccttccgacactgtgttttgttcagctctgtctctg |
26672540 |
T |
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