View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12947_low_16 (Length: 269)
Name: NF12947_low_16
Description: NF12947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12947_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 14327868 - 14328114
Alignment:
| Q |
11 |
agatatagaaatgggaattactttcaagaataattgcacatgcagttgctacaattttaatgaaaagtgtgatgataacaaaatgatctataaaccaaac |
110 |
Q |
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| T |
14327868 |
agatatagaaatggaaattactttcaagaataattgcacatgcagttgctacaattgtaatgaaaagtgtgatgataacaaaatgatctataaaccaaac |
14327967 |
T |
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| Q |
111 |
tagtatatatgtccatgctgtaatttaatgacttgtgttgtataaattagtataaaccaaactaaaatataagaatagattcatga----cttgcttgct |
206 |
Q |
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| T |
14327968 |
tagtatatatgtccatgctgtaatttaatgacttgtgttgtataaattagtataaaccaaactaaaatataagaatagattcatgacttgcttgcttgct |
14328067 |
T |
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| Q |
207 |
tgctccgtaagaaacttggggttttgtttactttctagaaagatttt |
253 |
Q |
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| T |
14328068 |
tgctccataagaaacttggggttttgtttactttctagaaagatttt |
14328114 |
T |
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