View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1294_low_13 (Length: 250)

Name: NF1294_low_13
Description: NF1294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1294_low_13
NF1294_low_13
[»] chr7 (19 HSPs)
chr7 (16-250)||(9557896-9558130)
chr7 (16-119)||(9230607-9230710)
chr7 (16-119)||(25024730-25024833)
chr7 (28-119)||(25491498-25491589)
chr7 (28-119)||(40703017-40703108)
chr7 (16-118)||(47729931-47730033)
chr7 (16-119)||(19400188-19400293)
chr7 (16-108)||(26782186-26782281)
chr7 (17-108)||(14088957-14089052)
chr7 (17-108)||(14398975-14399070)
chr7 (16-76)||(11019616-11019676)
chr7 (16-119)||(45197851-45197952)
chr7 (37-124)||(18375632-18375718)
chr7 (16-75)||(26493619-26493680)
chr7 (32-75)||(8395287-8395330)
chr7 (32-75)||(36631938-36631981)
chr7 (37-75)||(14775596-14775634)
chr7 (37-75)||(15226049-15226087)
chr7 (22-75)||(34468376-34468429)
[»] chr3 (17 HSPs)
chr3 (16-119)||(50091475-50091578)
chr3 (16-119)||(3856731-3856834)
chr3 (28-111)||(24988685-24988768)
chr3 (16-90)||(43137334-43137408)
chr3 (16-118)||(51408472-51408576)
chr3 (32-119)||(9743492-9743579)
chr3 (17-91)||(37381760-37381835)
chr3 (28-110)||(17073865-17073947)
chr3 (19-88)||(15668156-15668225)
chr3 (40-88)||(42964793-42964841)
chr3 (21-72)||(1185554-1185605)
chr3 (21-77)||(5136363-5136419)
chr3 (28-75)||(34083124-34083171)
chr3 (48-111)||(51262218-51262281)
chr3 (51-89)||(24130397-24130435)
chr3 (37-75)||(40080758-40080796)
chr3 (13-46)||(19237546-19237579)
[»] chr6 (12 HSPs)
chr6 (27-124)||(30621384-30621481)
chr6 (16-119)||(25599363-25599466)
chr6 (16-91)||(11971167-11971242)
chr6 (16-119)||(32441838-32441941)
chr6 (26-119)||(12648925-12649019)
chr6 (28-108)||(12180395-12180475)
chr6 (31-111)||(25340663-25340743)
chr6 (16-112)||(1296716-1296814)
chr6 (16-116)||(24074620-24074722)
chr6 (21-66)||(31028005-31028050)
chr6 (13-55)||(2753763-2753805)
chr6 (51-119)||(3051108-3051176)
[»] chr2 (18 HSPs)
chr2 (16-118)||(31393003-31393105)
chr2 (29-111)||(19951704-19951786)
chr2 (48-128)||(27925600-27925680)
chr2 (29-92)||(45261736-45261799)
chr2 (26-108)||(30547143-30547225)
chr2 (16-94)||(33453077-33453155)
chr2 (51-119)||(35649539-35649607)
chr2 (28-119)||(4554300-4554391)
chr2 (28-119)||(12539793-12539884)
chr2 (16-78)||(7071568-7071630)
chr2 (16-78)||(26238681-26238743)
chr2 (37-119)||(17443992-17444074)
chr2 (16-78)||(18425859-18425923)
chr2 (37-75)||(6402817-6402855)
chr2 (38-75)||(41250637-41250674)
chr2 (51-119)||(26655691-26655759)
chr2 (31-75)||(42443095-42443139)
chr2 (38-78)||(45122224-45122264)
[»] chr4 (30 HSPs)
chr4 (31-119)||(31002591-31002679)
chr4 (28-119)||(1147719-1147810)
chr4 (16-119)||(4325619-4325722)
chr4 (29-119)||(3074590-3074680)
chr4 (28-118)||(17359352-17359442)
chr4 (16-116)||(21753496-21753596)
chr4 (16-119)||(53692898-53693001)
chr4 (16-119)||(24104468-24104571)
chr4 (16-78)||(12211131-12211193)
chr4 (21-124)||(48131082-48131185)
chr4 (13-57)||(50720061-50720105)
chr4 (31-76)||(33135444-33135489)
chr4 (16-74)||(42843918-42843978)
chr4 (16-78)||(55464563-55464627)
chr4 (31-75)||(13390460-13390504)
chr4 (35-75)||(17510258-17510298)
chr4 (31-75)||(36381351-36381395)
chr4 (32-75)||(25931865-25931908)
chr4 (48-119)||(29528170-29528240)
chr4 (21-60)||(30111032-30111071)
chr4 (32-75)||(40530197-40530240)
chr4 (37-75)||(20130358-20130396)
chr4 (37-75)||(26438289-26438327)
chr4 (37-75)||(34406294-34406332)
chr4 (37-75)||(43357024-43357062)
chr4 (31-75)||(6236579-6236623)
chr4 (31-75)||(13398569-13398613)
chr4 (13-57)||(17555358-17555402)
chr4 (13-57)||(34770471-34770515)
chr4 (13-57)||(49908367-49908411)
[»] chr1 (25 HSPs)
chr1 (28-108)||(30055041-30055121)
chr1 (28-108)||(48606487-48606567)
chr1 (28-111)||(30558877-30558960)
chr1 (28-90)||(25017606-25017668)
chr1 (18-91)||(26272821-26272894)
chr1 (39-108)||(40864593-40864662)
chr1 (28-119)||(52753679-52753770)
chr1 (31-109)||(22892045-22892123)
chr1 (28-109)||(9637344-9637425)
chr1 (39-108)||(49465385-49465454)
chr1 (16-93)||(15209314-15209389)
chr1 (21-78)||(41971294-41971351)
chr1 (30-105)||(32981023-32981098)
chr1 (16-75)||(35948885-35948946)
chr1 (28-77)||(33490457-33490506)
chr1 (51-119)||(17875557-17875625)
chr1 (20-108)||(170327-170417)
chr1 (16-78)||(11843800-11843864)
chr1 (28-89)||(32379751-32379812)
chr1 (30-78)||(320714-320762)
chr1 (52-116)||(14499142-14499206)
chr1 (13-57)||(44352162-44352206)
chr1 (37-78)||(17446418-17446459)
chr1 (28-78)||(32885872-32885924)
chr1 (38-75)||(42309947-42309984)
[»] chr8 (22 HSPs)
chr8 (28-119)||(13152258-13152349)
chr8 (16-119)||(9256597-9256700)
chr8 (16-108)||(28846813-28846905)
chr8 (28-119)||(24592201-24592292)
chr8 (28-90)||(42447144-42447206)
chr8 (26-111)||(27190989-27191073)
chr8 (31-119)||(40145874-40145962)
chr8 (16-89)||(10467959-10468032)
chr8 (16-91)||(2826198-2826273)
chr8 (16-78)||(3436300-3436363)
chr8 (16-119)||(21958720-21958825)
chr8 (16-118)||(40469866-40469968)
chr8 (28-76)||(24333937-24333985)
chr8 (13-57)||(34845133-34845177)
chr8 (48-90)||(34228109-34228151)
chr8 (35-76)||(23403186-23403227)
chr8 (37-75)||(24019404-24019442)
chr8 (37-75)||(28524314-28524352)
chr8 (37-75)||(29727394-29727432)
chr8 (37-75)||(39915630-39915668)
chr8 (37-78)||(27046932-27046973)
chr8 (18-46)||(16532571-16532599)
[»] scaffold0178 (1 HSPs)
scaffold0178 (28-111)||(17960-18043)
[»] chr5 (20 HSPs)
chr5 (19-89)||(1280792-1280862)
chr5 (29-119)||(22712764-22712854)
chr5 (28-118)||(3055702-3055792)
chr5 (16-108)||(8785990-8786079)
chr5 (30-91)||(27168695-27168756)
chr5 (48-96)||(15730860-15730908)
chr5 (28-78)||(192849-192899)
chr5 (28-75)||(204070-204119)
chr5 (16-110)||(23244443-23244537)
chr5 (16-78)||(28801941-28802003)
chr5 (31-75)||(13819086-13819130)
chr5 (32-75)||(1775380-1775423)
chr5 (51-90)||(12098052-12098091)
chr5 (37-75)||(26282330-26282368)
chr5 (37-75)||(36292622-36292660)
chr5 (13-58)||(2985781-2985825)
chr5 (24-57)||(14317069-14317102)
chr5 (51-108)||(22542141-22542198)
chr5 (35-75)||(39435826-39435866)
chr5 (31-75)||(39656532-39656576)
[»] scaffold0726 (1 HSPs)
scaffold0726 (28-111)||(1103-1186)
[»] scaffold0198 (1 HSPs)
scaffold0198 (28-91)||(1616-1679)
[»] scaffold0170 (1 HSPs)
scaffold0170 (16-119)||(9284-9390)
[»] scaffold0015 (1 HSPs)
scaffold0015 (16-119)||(214023-214128)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-78)||(134757-134821)
[»] scaffold0002 (1 HSPs)
scaffold0002 (19-91)||(435241-435313)
[»] scaffold0154 (1 HSPs)
scaffold0154 (22-78)||(32287-32343)
[»] scaffold0069 (1 HSPs)
scaffold0069 (37-75)||(18686-18724)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 9557896 - 9558130
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||    
T  9557896 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtaaatttgcggtcaaaattttgctcagactcgataaaatttctgact 9557995  T
Q  116 ccgcgactacttaaatacaatttggtacacttgccaacaaatacaccatcaagttgttctgaagtctgattagcgtacccttaattaacaaacataaccc 215  Q
    |||| |||||||||||||||||||||||||||||| | | ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  9557996 ccgccactacttaaatacaatttggtacacttgccgatagatacaccatcaagttattctgaagtctgattagcgttcacttaattaacaaacataaccc 9558095  T
Q  216 taaattcccatgaaatttttcatgtggtcaccata 250  Q
    ||||||||||||||||| |||||||||||||||||    
T  9558096 taaattcccatgaaattcttcatgtggtcaccata 9558130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 9230607 - 9230710
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||| || ||||||||||||||||    
T  9230607 atgacgagcctcttttattttgatttatgactatttatatattatgtcacatgtgaatttgcaatcaaaattttgcccaggcttgataaaatttctagct 9230706  T
Q  116 ccgc 119  Q
    ||||    
T  9230707 ccgc 9230710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 25024730 - 25024833
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || |||    
T  25024730 atgatgaaccctttttattttgatttatgattatttatatattatgtcatatgtgaatttgcggttaaaattttgctcagactctataaaattcctggct 25024829  T
Q  116 ccgc 119  Q
    ||||    
T  25024830 ccgc 25024833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 25491589 - 25491498
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    ||||||||  ||||||||| |||||||||||||||||||||| |||||||||| |||||||||| ||||||| ||||||| ||| |||||||    
T  25491589 ttttatttcaatttatgactatttatatattatgtcacatgtaaatttgcggttaaaattttgcccagactctataaaatatctggctccgc 25491498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 40703017 - 40703108
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||  || ||||||||||||| | |||||||    
T  40703017 ttttattttgatttatgactatttatatattgtggcacatgtgaatttgaggtcaaaattttgcctaggctcgataaaatttatggctccgc 40703108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 47729931 - 47730033
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| |||||||| |||||||||  |||||||||||||||||||| ||||||| ||||||||||||||| || |||| ||||||||| | |||    
T  47729931 atgacgagcctcttttatttcgatttatgattatttatatattatgtcacatttgaatttacggtcaaaattttgcacaaactctataaaatttatggct 47730030  T
Q  116 ccg 118  Q
    |||    
T  47730031 ccg 47730033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 19400188 - 19400293
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctag 113  Q
    ||||||||||| ||||||||||||||||||| |||  ||||||||||||||||| |||||||||| | ||  |||||| ||| ||| ||||||||||| |    
T  19400188 atgacgaacctcttttattttgatttatgactatttatatatattatgtcacatatgaatttgcgataaactttttgcccaggctctataaaatttctgg 19400287  T
Q  114 ctccgc 119  Q
    ||||||    
T  19400288 ctccgc 19400293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 26782281 - 26782186
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaa---tttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    ||||||| ||| ||||||||||||||||||| |   ||||||||||||||| |||||||||||| | |||||||||||| ||||||| ||||||||    
T  26782281 atgacgagcctattttattttgatttatgactactatttatatattatgtcgcatgtgaatttgagatcaaaattttgcccagactcaataaaatt 26782186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 14088957 - 14089052
Alignment:
Q  17 tgacgaaccttttttattttgatttatgacaatttatatattatgtcacat----gtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||||| ||| ||||||||||||||||||| |||| |||||||||||||||    || |||||||||| ||||||||||||||||||  |||||||    
T  14088957 tgacgagcctattttattttgatttatgactatttgtatattatgtcacatgtaagtaaatttgcggttaaaattttgctcagactctgtaaaatt 14089052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 14398975 - 14399070
Alignment:
Q  17 tgacgaaccttttttattttgatttatgacaatttatatattatgtcacat----gtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||||| ||| ||||||||||||||||||| |||| |||||||||||||||    || |||||||||| ||||||||||||||||||  |||||||    
T  14398975 tgacgagcctattttattttgatttatgactatttgtatattatgtcacatgtaagtaaatttgcggttaaaattttgctcagactctgtaaaatt 14399070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 11019676 - 11019616
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttg 76  Q
    |||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11019676 atgaggaacctcttttattttgatttatgactgtttatatattatgtcacatgtgaatttg 11019616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 45197851 - 45197952
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    |||||||| || |||||||| |||||||||| |||||||  |||||||||||||||||||||| | ||  |||||| || |||| ||| ||||||| |||    
T  45197851 atgacgaatctcttttatttcgatttatgaccatttata--ttatgtcacatgtgaatttgcgataaattttttgcccacactctatagaatttctggct 45197948  T
Q  116 ccgc 119  Q
    ||||    
T  45197949 ccgc 45197952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 18375632 - 18375718
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgcgacta 124  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||||||||| | || |||| | |||||| || ||||||| ||||    
T  18375632 gatttatgactatttatatattatgtcacatgtg-atttgctgtcaaaattttacccatactctacaaaattcctggctccgccacta 18375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 26493680 - 26493619
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaattt 75  Q
    ||||||| ||| |||||||||||| |||||| |||  |||||||||||||||||||||||||    
T  26493680 atgacgatcctcttttattttgatatatgactatttatatatattatgtcacatgtgaattt 26493619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 8395287 - 8395330
Alignment:
Q  32 attttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||| ||||||||||  |||||||||||||||||||||||||||    
T  8395287 atttcgatttatgactgtttatatattatgtcacatgtgaattt 8395330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 36631938 - 36631981
Alignment:
Q  32 attttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||| ||||||||||  |||||||||||||||||||||||||||    
T  36631938 atttcgatttatgactgtttatatattatgtcacatgtgaattt 36631981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 14775634 - 14775596
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  14775634 gatttatgactatttatatattatgtcatatgtgaattt 14775596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 15226087 - 15226049
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  15226087 gatttatgactatttatatattatgtcatatgtgaattt 15226049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 34468429 - 34468376
Alignment:
Q  22 aaccttttttattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||| ||||||||  |||||||||  |||||||||||| ||||||||||||||    
T  34468429 aacctcttttatttcaatttatgactgtttatatattatatcacatgtgaattt 34468376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 50091475 - 50091578
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||||||||| | |||| |||||||||||||||||||||| ||||||    
T  50091475 atgacgaacctcttttattttgatttatgactatttatatattatgtcgcaagtgaatttgcgataaaaagtttgctcagactcgataaaattcctagct 50091574  T
Q  116 ccgc 119  Q
    ||||    
T  50091575 ccgc 50091578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 3856834 - 3856731
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    |||||||||||  ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||  |||| ||||||||||||||| |||    
T  3856834 atgacgaacctactttattttgatttataactatttatatattatgtcacatgtgaatttgcggtgaaaattttattcaggctcgataaaatttctggct 3856735  T
Q  116 ccgc 119  Q
    ||||    
T  3856734 ccgc 3856731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 24988768 - 24988685
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||| | || |||| |||||||||||    
T  24988768 ttttattttgatttatgattatttataaattatgtcacatgtgaatttgtggtcaaaattttacccacactctataaaatttct 24988685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 43137334 - 43137408
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttg 90  Q
    ||||| ||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  43137334 atgacaaacctcttttatttcgatttatgactattcatatattatgtcacatgtgaatttgcggttaaaattttg 43137408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 51408576 - 51408472
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctag 113  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||||||| |||||||||| | ||  |||||| |||| || ||||||||||| |    
T  51408576 atgacgaactttttttattttgatttatgactatttatatatattatgtcacatatgaatttgcgataaactttttgcccagattctataaaatttctgg 51408477  T
Q  114 ctccg 118  Q
    |||||    
T  51408476 ctccg 51408472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 9743492 - 9743579
Alignment:
Q  32 attttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||| |||||||||| |||||||||  |||| |||||||||||||||||||||||||||| ||||||  |||||||| || |||||||    
T  9743492 atttcgatttatgactatttatatacaatgtaacatgtgaatttgcggtcaaaattttgcccagactatataaaattcctggctccgc 9743579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 37381835 - 37381760
Alignment:
Q  17 tgacgaaccttttttattttgatttatga-caatttatatattatgtcacatgtgaatttgcggtcaaaattttgc 91  Q
    |||||||||| |||||||| ||||||||| | ||||||||||||| |||||||||||||| |||| ||||||||||    
T  37381835 tgacgaacctcttttatttcgatttatgaactatttatatattatatcacatgtgaattttcggttaaaattttgc 37381760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 17073947 - 17073865
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttc 110  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||||||||| |||||||||| || ||  ||| ||||||||||    
T  17073947 ttttatttcgatttttgactatttatatattatgtcacatatgaatttgcagtcaaaatttggcccatgctctataaaatttc 17073865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 15668156 - 15668225
Alignment:
Q  19 acgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattt 88  Q
    |||| ||| |||||||||| | |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  15668156 acgagcctcttttattttgctatatgactatttatatattatgtcacatgtgaatttacggtgaaaattt 15668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 42964841 - 42964793
Alignment:
Q  40 ttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattt 88  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  42964841 ttatgacaatttatatattatgtcacatgtgaatttacggttaaaattt 42964793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 1185605 - 1185554
Alignment:
Q  21 gaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaa 72  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  1185605 gaacctcttttattttgatttatgactgtttatatattatgtcacatgtgaa 1185554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 5136363 - 5136419
Alignment:
Q  21 gaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgc 77  Q
    |||||| ||||||||| |||||||||  ||||||||||| |||||||||||||||||    
T  5136363 gaacctcttttattttaatttatgactgtttatatattacgtcacatgtgaatttgc 5136419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 34083171 - 34083124
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||    
T  34083171 tttttttttgatttatgactgtttatatattatgtcacatgtgaattt 34083124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 51262218 - 51262281
Alignment:
Q  48 atttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    |||||||||||||||||||||||||||  |||| |||||||| |  | |||| |||||||||||    
T  51262218 atttatatattatgtcacatgtgaattcacggttaaaattttacctatactctataaaatttct 51262281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 24130435 - 24130397
Alignment:
Q  51 tatatattatgtcacatgtgaatttgcggtcaaaatttt 89  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  24130435 tatatattatgtcacatgtgaatttacggtcaaattttt 24130397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 40080796 - 40080758
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  40080796 gatttatgattatttatatattatgtcacatgtgaattt 40080758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 19237546 - 19237579
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgac 46  Q
    |||||||||| |||||||||||||||||||||||    
T  19237546 aatatgacgatccttttttattttgatttatgac 19237579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 30621384 - 30621481
Alignment:
Q  27 tttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgcgacta 124  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||| || ||||||||||||| |||||||||| ||||    
T  30621384 tttttattttgatttatgactatttatatattatgtcgcatgtgaatttgcgatcaaaactttgcccaaactcgataaaattcctagctccgccacta 30621481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 25599363 - 25599466
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| |||||||| |||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  25599363 atgacgagcctattttatttcgatttatgactatttatatatcatgtcgcatgtgaatttgcggtcaaaattttgcccaggctcgataaattttttagct 25599462  T
Q  116 ccgc 119  Q
    ||||    
T  25599463 ccgc 25599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 11971167 - 11971242
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgc 91  Q
    ||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  11971167 atgacaaacctcttttatcttgatttatgactatttatatattatgtcacatgtgaatttgcggttaaaattttgc 11971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 32441941 - 32441838
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| |||||||| |||||||||| |||||||||||||||| |||||||||||||  |||||||||| |  || ||| |||||||||||| ||    
T  32441941 atgacgagcctcttttatttcgatttatgactatttatatattatgtcgcatgtgaatttgcaatcaaaattttaccgaggctccataaaatttctaact 32441842  T
Q  116 ccgc 119  Q
    ||||    
T  32441841 ccgc 32441838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 12648925 - 12649019
Alignment:
Q  26 ttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaatttt-gctcagactcgataaaatttctagctccgc 119  Q
    |||| ||||| ||| |||||| |||||||||||||| ||||||| |||||| |||||||||||| || || |||| |||||||| ||||||||||    
T  12648925 ttttatatttcgatgtatgactatttatatattatgccacatgtaaatttgtggtcaaaattttcgcccatactcaataaaattcctagctccgc 12649019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 12180475 - 12180395
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||| |||||| ||  ||||  ||| |||||||||||||    
T  12180475 ttttatttcgatttatgactatttatatattatgtcgcatgtgaatctgcggtaaattttttattcaaactcgataaaatt 12180395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 25340663 - 25340743
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    ||||| |||||| ||| ||||||||||||||||| || | ||||| |||| |||||||||| ||||||| |||||||||||    
T  25340663 tatttcgatttaggactatttatatattatgtcatatataaatttacggttaaaattttgcacagactctataaaatttct 25340743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 1296716 - 1296814
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttata--tattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttcta 112  Q
    ||||||||||  ||||||||| ||||||||| |||||||  ||||||||||||| |||||||||| | ||  |||||||||||||  | ||||||||||    
T  1296716 atgacgaaccacttttattttaatttatgactatttatatatattatgtcacatttgaatttgcgataaattttttgctcagactttaaaaaatttcta 1296814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 24074620 - 24074722
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctag 113  Q
    ||||||| ||| |||||||||||||||| || |||  ||||||||||||||||||||||||| || | ||  ||| || | | ||| |||||||||||||    
T  24074620 atgacgaccctcttttattttgatttattactattattatatattatgtcacatgtgaatttacgataaatttttcgcccgggctctataaaatttctag 24074719  T
Q  114 ctc 116  Q
    |||    
T  24074720 ctc 24074722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 31028050 - 31028005
Alignment:
Q  21 gaaccttttttattttgatttatgacaatttatatattatgtcaca 66  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||    
T  31028050 gaacctcttttatttcgatttatgactatttatatattatgtcaca 31028005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 2753763 - 2753805
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatat 55  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||    
T  2753763 aatacgacgatccttttttattttgatttatgactatttatat 2753805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 3051108 - 3051176
Alignment:
Q  51 tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||||||||||||||||||||||| | ||  ||| || || |||| ||| ||||||| |||||||    
T  3051108 tatatattatgtcacatgtgaatttgcgataaatttttcgcccaaactctatataatttctcgctccgc 3051176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 31393003 - 31393105
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||||||| ||||| || |||||||||| |||||||||||||||||||||| ||||| ||||||||||||| | |||||||||| ||||| ||||||    
T  31393003 atgacgaacctcttttaattcgatttatgactatttatatattatgtcacatgtaaatttacggtcaaaattttacccagactcgatgaaattcctagct 31393102  T
Q  116 ccg 118  Q
    |||    
T  31393103 ccg 31393105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 19951786 - 19951704
Alignment:
Q  29 tttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||||  ||||||| |||||||||||    
T  19951786 tttatttcgatttatgactatttatatattatgttacatgtgaatttgcggttaaaattttgaccagactctataaaatttct 19951704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 27925680 - 27925600
Alignment:
Q  48 atttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgcgactactta 128  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| | ||||||  ||||||||    
T  27925680 atttatatatcatgtcacatgtgaatttgcggtcaaaattttgttcaggctcgataaaatttatggctccgtcactactta 27925600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 45261799 - 45261736
Alignment:
Q  29 tttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgct 92  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  45261799 tttatttagatttatgactatttatatattatatcacatgtgaatttgcggttaaaattttgct 45261736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 30547143 - 30547225
Alignment:
Q  26 ttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||| ||||||||| |||||| |||||| |||||| |||||||||||||||||||||||||||| | || |||| ||||||||    
T  30547143 ttttatattttgatctatgactatttatgtattatatcacatgtgaatttgcggtcaaaattttacccaaactcaataaaatt 30547225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 33453155 - 33453077
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctca 94  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||||| |||||||||||||| | || |||||||||||||    
T  33453155 atgacgaacctattttactttgatttatgattatttatatattatctcacatgtgaatttacagttaaaattttgctca 33453077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 35649607 - 35649539
Alignment:
Q  51 tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||||||||||||||||||||||| | ||| |||||| || |||| ||||||||||| |||||||    
T  35649607 tatatattatgtcacatgtgaatttgcgattaaatttttgcccaaactctataaaatttctggctccgc 35649539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 4554391 - 4554300
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||| |||||||||| |||||||||||||||||||| | ||||| || | ||  |||||| ||||||| ||||| || ||||||||||    
T  4554391 ttttatttcgatttatgactatttatatattatgtcacatctaaatttacgataaattttttgcccagactccataaatttcctagctccgc 4554300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 12539793 - 12539884
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||| |||| ||||| |||||||||||||||||||| | ||||| ||||||||||||| |  | | || |||||||| ||||||||||    
T  12539793 ttttatttcgattcatgactatttatatattatgtcacatataaatttacggtcaaaattttacctaaattcaataaaattcctagctccgc 12539884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 7071630 - 7071568
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||| |||||| ||||||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  7071630 atgaggaacctcttttattttgacttatgactgtttatgtattatgtcacatgtgaatttgcg 7071568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 26238681 - 26238743
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||| |||||| |||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  26238681 atgaggaacctcttttatttcgatttatgactgtttatatattatgtcgcatgtgaatttgcg 26238743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 17444074 - 17443992
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    ||||||||||  ||||||||||||||||||||||||||| || | ||  |||||| ||||||| ||||| || || |||||||    
T  17444074 gatttatgactgtttatatattatgtcacatgtgaatttacgattaattttttgcccagactccataaatttgctggctccgc 17443992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 18425923 - 18425859
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatat--tatgtcacatgtgaatttgcg 78  Q
    |||| |||||| |||||||| ||||| |||| ||||||||||  |||||||||||||||||||||    
T  18425923 atgatgaacctcttttatttcgatttctgactatttatatatattatgtcacatgtgaatttgcg 18425859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 6402855 - 6402817
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  6402855 gatttatgactgtttatatattatgtcacatgtgaattt 6402817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 41250674 - 41250637
Alignment:
Q  38 atttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||||||||  |||||||||||||||||||||||||||    
T  41250674 atttatgactgtttatatattatgtcacatgtgaattt 41250637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 26655759 - 26655691
Alignment:
Q  51 tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    ||||||||||||||||||||||||| || | ||  |||||| ||| ||| ||||||||| | |||||||    
T  26655759 tatatattatgtcacatgtgaatttacgataaattttttgcccaggctctataaaatttttggctccgc 26655691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 42443095 - 42443139
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||| ||||||||||  |||||||||||| ||||||||||||||    
T  42443095 tatttcgatttatgactgtttatatattatatcacatgtgaattt 42443139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 45122224 - 45122264
Alignment:
Q  38 atttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||||||||  |||||||||||| |||||||||||||||||    
T  45122224 atttatgactgtttatatattatatcacatgtgaatttgcg 45122264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 31002679 - 31002591
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||| | |||||||    
T  31002679 tattttgatttatgactatttatatattatgtcacatgtgaatttgcggtcaaaattttgcccaggctctacaaaatttatggctccgc 31002591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 1147719 - 1147810
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||||||||||| || |||||||||||||||  |||||||||||| | ||||||||| || |||||||||||||||| ||||||||||    
T  1147719 ttttattttgatttataactatttatatattatgtagcatgtgaatttgtgatcaaaatttagcacagactcgataaaattcctagctccgc 1147810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 4325619 - 4325722
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| ||||||||  ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||  |||||| |||||||| |||    
T  4325619 atgacgagcctcttttatttaaatttatgactatttatatattatatcacatgtaaatttgcggtcaaaattttgcccatgctcgatgaaatttctggct 4325718  T
Q  116 ccgc 119  Q
    ||||    
T  4325719 ccgc 4325722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 3074590 - 3074680
Alignment:
Q  29 tttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    ||||||| |||||||||| ||||||||||||||||  |||||||||| | ||||||||||| | |||||||||||||||| ||||||||||    
T  3074590 tttatttcgatttatgactatttatatattatgtcgtatgtgaatttacagtcaaaattttacccagactcgataaaattcctagctccgc 3074680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 17359352 - 17359442
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccg 118  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||  |||||||||||| || ||||||    
T  17359352 ttttatttcgatttatgattatttatatattatgtcacatgtgaatttgcagtcaaaattttgcacatgctcgataaaattccttgctccg 17359442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 21753596 - 21753496
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| |||||||| ||||||| |  ||||||||||||||||| |||||||||| | ||||||||||| ||||| ||||||||||||||| |||    
T  21753596 atgacgagcctattttatttcgatttataattatttatatattatgtcatatgtgaatttacagtcaaaattttactcaggctcgataaaatttctcgct 21753497  T
Q  116 c 116  Q
    |    
T  21753496 c 21753496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 53693001 - 53692898
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| |||||||| |||||||||| |||||||||||||||| |||||||||||||  | |||||||||  || |||||||||||||  |||||    
T  53693001 atgacgagcctcttttatttcgatttatgactatttatatattatgtcgcatgtgaatttgcaattaaaattttgtccaaactcgataaaattcttagct 53692902  T
Q  116 ccgc 119  Q
    ||||    
T  53692901 ccgc 53692898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 24104571 - 24104468
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| |||||||| | | ||||||  ||||||||||||||||||||||||| ||||||||||||||| | ||  ||||||||||||| | |||    
T  24104571 atgacgagcctcttttatttcgttctatgactgtttatatattatgtcacatgtgaatatgcggtcaaaattttacccaagctcgataaaatttatggct 24104472  T
Q  116 ccgc 119  Q
    ||||    
T  24104471 ccgc 24104468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 12211193 - 12211131
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  12211193 atgacgaatcttttttatttcgatttatgattatttatatattatgtcacatgtgaatttgcg 12211131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 48131082 - 48131185
Alignment:
Q  21 gaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgcg 120  Q
    ||||||||||||||| |||||||||   ||||||||||||||||||||| |||||||| | |   |||||| ||||||| ||||| || || |||||||     
T  48131082 gaaccttttttatttcgatttatgaatgtttatatattatgtcacatgttaatttgcgataatttttttgcccagactccataaatttcctggctccgcc 48131181  T
Q  121 acta 124  Q
    ||||    
T  48131182 acta 48131185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 50720105 - 50720061
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatatat 57  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  50720105 aatatgacgatccttttttattttgatttatgactatttatatat 50720061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 33135489 - 33135444
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaatttg 76  Q
    ||||||||||||||||  || |||||||||||||||||||||||||    
T  33135489 tattttgatttatgactgttgatatattatgtcacatgtgaatttg 33135444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 42843918 - 42843978
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaatt 74  Q
    ||||||||||| |||||||| |||||||||| |||  ||||||||| ||||||||||||||    
T  42843918 atgacgaacctcttttatttcgatttatgactatttatatatattacgtcacatgtgaatt 42843978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 55464627 - 55464563
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttat--atattatgtcacatgtgaatttgcg 78  Q
    ||||||||||| |||||||| |||||| ||||||||||  |||||||||||||| ||||| ||||    
T  55464627 atgacgaacctcttttatttcgatttacgacaatttatatatattatgtcacatatgaatatgcg 55464563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 13390504 - 13390460
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||||||||  || ||||||||||||||||||||||||    
T  13390504 tattttgatttatgactgttgatatattatgtcacatgtgaattt 13390460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 17510298 - 17510258
Alignment:
Q  35 ttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  17510298 ttgatttatgactgtttatatattatgtcacatgtgaattt 17510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 36381395 - 36381351
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||    
T  36381395 tatttcgatttatgactgtttatatattatgtcacatgtgaattt 36381351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 25931865 - 25931908
Alignment:
Q  32 attttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||| ||||||||||  |||||||||||||||||||||||||||    
T  25931865 atttcgatttatgactgtttatatattatgtcacatgtgaattt 25931908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 29528240 - 29528170
Alignment:
Q  48 atttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||||||||||| ||||||||||| | || ||||| || |  |||||| |||||||||||||||||||    
T  29528240 atttatatattatgtcgcatgtgaatttacagttaaaatatt-cgtagactctataaaatttctagctccgc 29528170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 30111032 - 30111071
Alignment:
Q  21 gaaccttttttattttgatttatgacaatttatatattat 60  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  30111032 gaacctattttattttgatttatgactatttatatattat 30111071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 40530197 - 40530240
Alignment:
Q  32 attttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||| ||||||||||  |||||||||||||||||||||||||||    
T  40530197 atttcgatttatgactgtttatatattatgtcacatgtgaattt 40530240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 20130358 - 20130396
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  20130358 gatttatgactgtttatatattatgtcacatgtgaattt 20130396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 26438327 - 26438289
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  26438327 gatttatgactgtttatatattatgtcacatgtgaattt 26438289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 34406332 - 34406294
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  34406332 gatttatgactgtttatatattatgtcacatgtgaattt 34406294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 43357024 - 43357062
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  43357024 gatttatgactgtttatatattatgtcacatgtgaattt 43357062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 6236579 - 6236623
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||    
T  6236579 tatttcgatttatgactgtttatatattatgtcacatatgaattt 6236623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 13398613 - 13398569
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||| ||||||||||  || ||||||||||||||||||||||||    
T  13398613 tatttcgatttatgactgttgatatattatgtcacatgtgaattt 13398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17555358 - 17555402
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatatat 57  Q
    |||||||||| ||||||||||||| || |||||| ||||||||||    
T  17555358 aatatgacgatccttttttatttttatatatgactatttatatat 17555402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34770515 - 34770471
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatatat 57  Q
    |||||||||| ||||||||||||| || |||||| ||||||||||    
T  34770515 aatatgacgatccttttttatttttatatatgactatttatatat 34770471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 49908411 - 49908367
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatatat 57  Q
    |||||||||| ||||||||||||| || |||||| ||||||||||    
T  49908411 aatatgacgatccttttttatttttatatatgactatttatatat 49908367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 30055041 - 30055121
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||    
T  30055041 ttttattttgatttatgactatttatatattatgtcatatgtgaatttgcggtcaaaattttgtccagactctataaaatt 30055121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 48606567 - 48606487
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    ||||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  48606567 ttttatttcaatttatgactatttatatattatgttacatgtgaatttgcggtcaaaattttgctcagactctataaaatt 48606487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 30558960 - 30558877
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| |||| || |||| |||||||||||    
T  30558960 ttttattttgatttatgactatttatatattatgtcacatgtgaatttacagtcaaaatcttgcgcaaactctataaaatttct 30558877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 25017606 - 25017668
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttg 90  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  25017606 ttttatttcgatttatgactatttatatattatgtcacatgtaaatttgcggtcaaaattttg 25017668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 26272894 - 26272821
Alignment:
Q  18 gacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgc 91  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||| |||| |||||    
T  26272894 gacgaaccttttttatttcgatttatgactatttatatatcatgtcacatgtaaatttgcggttaaaaatttgc 26272821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 40864662 - 40864593
Alignment:
Q  39 tttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  40864662 tttatgactatttatatattatgtcacatgtaaatttgcggtcaaaattttgtccagacacgataaaatt 40864593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 52753770 - 52753679
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||| || |||||||||||  || ||||||| ||||| ||| ||||||    
T  52753770 ttttatttcgatttatgactatttatatattatgtcgcatgtgaatttacgatcaaaattttgtccaaactcgattaaattcctatctccgc 52753679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 22892045 - 22892123
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaattt 109  Q
    |||||||||||||| | ||||||||||| || |||||||||||||| ||||||||||||||  || |||||||||||||    
T  22892045 tattttgatttatgtctatttatatattgtggcacatgtgaatttgaggtcaaaattttgcctaggctcgataaaattt 22892123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 9637344 - 9637425
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaattt 109  Q
    |||||||| ||||||| |  |||||||||||||||||||| |||||||  |||||||||||||| |||||||||| ||||||    
T  9637344 ttttatttcgatttattattatttatatattatgtcacatatgaatttagggtcaaaattttgcgcagactcgatgaaattt 9637425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 49465454 - 49465385
Alignment:
Q  39 tttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||| ||||| ||| ||||||||||||    
T  49465454 tttatgactatttatatattatgtcgcatgtgaatttgcggttaaaactttgcccaggctcgataaaatt 49465385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 15209389 - 15209314
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctc 93  Q
    |||| |||||| |||||||| ||||||||||  |||||||||||||||||||||||||||||| | ||| ||||||||    
T  15209389 atgatgaacctcttttatttcgatttatgac--tttatatattatgtcacatgtgaatttgcgttaaaatttttgctc 15209314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 41971351 - 41971294
Alignment:
Q  21 gaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  41971351 gaacctcttttattttgagttatgactgtttatatattatgtcacatgtgaatttgcg 41971294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 32981098 - 32981023
Alignment:
Q  30 ttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaa 105  Q
    |||||| |||||||||| |||||||||||||||||||||||||||| || | ||  |||||||| ||||| |||||    
T  32981098 ttatttcgatttatgactatttatatattatgtcacatgtgaatttacgattaattttttgctcggactccataaa 32981023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 35948946 - 35948885
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaattt 75  Q
    ||||||| ||| ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  35948946 atgacgatcctcttttattttgatttatgactattattatatattatgtcacatgtgaattt 35948885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 33490457 - 33490506
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgc 77  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  33490457 ttttatttcgatttatgactatttatatattatgtcgcatgtgaatttgc 33490506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 17875557 - 17875625
Alignment:
Q  51 tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||||||||||||||||||||||| | ||  |||||| ||||||| ||||||||| | |||||||    
T  17875557 tatatattatgtcacatgtgaatttgcgataaattttttgcccagactctataaaatttatggctccgc 17875625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 170417 - 170327
Alignment:
Q  20 cgaaccttttttattttgatttatgacaatttatatat--tatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    ||||||| |||||||| |||||||||| ||||||||||  |||||||||||| |||||||| | ||  |||| ||||||||  ||||||||    
T  170417 cgaacctcttttatttcgatttatgactatttatatatattatgtcacatgtaaatttgcgataaatttttttctcagactttataaaatt 170327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 11843864 - 11843800
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaatttgcg 78  Q
    ||||||||||||||||||||  ||||||||| |||  |||||||||||| ||||| |||||||||    
T  11843864 atgacgaaccttttttatttcaatttatgactatttatatatattatgttacatgcgaatttgcg 11843800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 32379812 - 32379751
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaatttt 89  Q
    |||||||| |||||||||  |||||||||  |||||||||||||||||||| ||||| ||||    
T  32379812 ttttatttcgatttatgattatttatataacatgtcacatgtgaatttgcgttcaaattttt 32379751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 320762 - 320714
Alignment:
Q  30 ttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||||| ||||||||||   |||||||||||||||||||||||||||||    
T  320762 ttatttcgatttatgactgattatatattatgtcacatgtgaatttgcg 320714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 14499142 - 14499206
Alignment:
Q  52 atatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctc 116  Q
    |||||||||||| |||||||||||||| ||||| |||| |  || |||||||||||| |||||||    
T  14499142 atatattatgtcgcatgtgaatttgcgatcaaattttttcctaggctcgataaaattcctagctc 14499206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 44352206 - 44352162
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatatat 57  Q
    |||||||||| ||||||||||||||||||||||| || |||||||    
T  44352206 aatatgacgatccttttttattttgatttatgactatatatatat 44352162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 17446418 - 17446459
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    ||||||||||  || |||||||||||||||||||||||||||    
T  17446418 gatttatgactgttgatatattatgtcacatgtgaatttgcg 17446459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 32885924 - 32885872
Alignment:
Q  28 ttttattttgatttatgacaatttatatat--tatgtcacatgtgaatttgcg 78  Q
    ||||| ||||||||||||  ||||||||||  |||||||||||||||||||||    
T  32885924 ttttaatttgatttatgattatttatatatattatgtcacatgtgaatttgcg 32885872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 42309984 - 42309947
Alignment:
Q  38 atttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||||||||  |||||||||||||||||||||||||||    
T  42309984 atttatgactgtttatatattatgtcacatgtgaattt 42309947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 13152349 - 13152258
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    ||||||||  ||||||||  |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  13152349 ttttatttcaatttatgattatttatatattatgtcgcatgtgaatttgcgatcaaaattttgcccagactcgataaaattcctagctccgc 13152258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 9256597 - 9256700
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    ||||||| ||| || |||||| ||||||||| |||||||||||||||| || ||||||||||| ||||||||||   ||||||||||||||||  |||||    
T  9256597 atgacgagcctcttgtattttaatttatgactatttatatattatgtcgcacgtgaatttgcgatcaaaattttatccagactcgataaaattcttagct 9256696  T
Q  116 ccgc 119  Q
    ||||    
T  9256697 ccgc 9256700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 28846813 - 28846905
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||||||| || |||||||| |||||||||| ||||||||||||| ||||||||||||||  ||| |||||||||| || |||| ||||||||    
T  28846813 atgacgaatctcttttatttcgatttatgactatttatatattatatcacatgtgaatttatggttaaaattttgcacaaactctataaaatt 28846905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 24592292 - 24592201
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||| | |||||||||| | |||||| ||||||||||||||||||| |||| |||||||||||||| ||| |||||||| || |||||||    
T  24592292 ttttatctcgatttatgactaattatatgttatgtcacatgtgaatttacggttaaaattttgctcaggctctataaaattcctggctccgc 24592201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 42447144 - 42447206
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttg 90  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  42447144 ttttatttcgatttatgactgtttatatattatgtcacatgtgaatttgcgatcaaaattttg 42447206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 27190989 - 27191073
Alignment:
Q  26 ttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||| |||||||| |  |||||| |||||||||||    
T  27190989 ttttttattttaatttatgactatttatatattatgtcatatgtgaatttg-ggttaaaattttacctagactctataaaatttct 27191073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 40145962 - 40145874
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    ||||| |||||||||  |||||||||||||||||||| | ||||||||||||||||||||| || | || ||||||||| | |||||||    
T  40145962 tatttcgatttatgattatttatatattatgtcacatataaatttgcggtcaaaattttgcccaaaatctataaaatttatggctccgc 40145874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 10467959 - 10468032
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaatttt 89  Q
    ||||||| ||| |||||||| |||||||||| ||||||||||||| || |||||||||||| ||| ||||||||    
T  10467959 atgacgagcctcttttatttcgatttatgactatttatatattatttcgcatgtgaatttgtggttaaaatttt 10468032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 2826273 - 2826198
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgc 91  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||   |||| |||||| ||| ||||||||||    
T  2826273 atgacaaacctattttattttgatttatgactatttatatattatgttctatgtaaatttgtggttaaaattttgc 2826198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 3436300 - 3436363
Alignment:
Q  16 atgacgaaccttttttatttt-gatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||| |||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  3436300 atgaggaacctattttattttcgatttatgactgtttatatattatgtcacatgtgaatttgcg 3436363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 21958720 - 21958825
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttata--tattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctag 113  Q
    |||| |||||| |||||||| |||||||||| |||||||  ||||||||||||| |||||||||| | ||  |||||| ||  ||| |||||||| ||||    
T  21958720 atgaagaacctcttttatttcgatttatgactatttatatatattatgtcacatatgaatttgcgataaactttttgcccaagctctataaaattcctag 21958819  T
Q  114 ctccgc 119  Q
    ||||||    
T  21958820 ctccgc 21958825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 40469968 - 40469866
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagct 115  Q
    |||| |||||| |||||||| ||||||||||  |||||||||||| || ||||||||||| || | || ||||||| | ||||| ||||| ||||| |||    
T  40469968 atgaggaacctcttttatttcgatttatgactgtttatatattatatcgcatgtgaatttacgataaatattttgcccggactccataaattttctggct 40469869  T
Q  116 ccg 118  Q
    |||    
T  40469868 ccg 40469866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 24333937 - 24333985
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttg 76  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  24333937 ttttatttcgatttatgactatttatatattatatcacatgtgaatttg 24333985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 34845133 - 34845177
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatatat 57  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  34845133 aatatgacgatccttttttattttgatttatgactatttatatat 34845177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 34228151 - 34228109
Alignment:
Q  48 atttatatattatgtcacatgtgaatttgcggtcaaaattttg 90  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  34228151 atttatatattatttcacatgtgaatttgcggttaaaattttg 34228109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 23403186 - 23403227
Alignment:
Q  35 ttgatttatgacaatttatatattatgtcacatgtgaatttg 76  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  23403186 ttgatttatgactattgatatattatgtcacatgtgaatttg 23403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 24019442 - 24019404
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  24019442 gatttatgactatttatatattatatcacatgtgaattt 24019404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 28524314 - 28524352
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  28524314 gatttatgactgtttatatattatgtcacatgtgaattt 28524352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 29727432 - 29727394
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  29727432 gatttatgactgtttatatattatgtcacatgtgaattt 29727394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 39915630 - 39915668
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  39915630 gatttatgactatttatatattatatcacatgtgaattt 39915668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 27046932 - 27046973
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    ||||||||||  ||||||||||||||||||||| ||||||||    
T  27046932 gatttatgactgtttatatattatgtcacatgtaaatttgcg 27046973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 16532599 - 16532571
Alignment:
Q  18 gacgaaccttttttattttgatttatgac 46  Q
    |||||||||||||||||||||||||||||    
T  16532599 gacgaaccttttttattttgatttatgac 16532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 17960 - 18043
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  17960 ttttattttgatttatgactatttatatattacaccacatgtgaatttgcgatcaaaattttgcccagattcgataaaatttct 18043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 1280792 - 1280862
Alignment:
Q  19 acgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaatttt 89  Q
    |||| ||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  1280792 acgagcctcttttatttcgatttatgactatttatatattatgtcacatgtgaatttgcggttaaaatttt 1280862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 22712854 - 22712764
Alignment:
Q  29 tttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccgc 119  Q
    |||||||  ||||||||| |||||||||| ||||||||||| || |||||||||||||||||  || ||||||||||||| ||||||||||    
T  22712854 tttatttcaatttatgactatttatatatcatgtcacatgtaaacttgcggtcaaaattttgtccaaactcgataaaattcctagctccgc 22712764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 3055702 - 3055792
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctagctccg 118  Q
    |||||||| |||||||||| ||||||||||||| |  |||||||||||||| |||||||||||  ||  |||||||||||| |||||||||    
T  3055702 ttttatttcgatttatgactatttatatattatatagcatgtgaatttgcgatcaaaattttgtccaagctcgataaaattcctagctccg 3055792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 8785990 - 8786079
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    ||||| ||||| ||||||||| ||||||||    |||||||||||||| |||||||||||||||| |||||||||| || |||| ||||||||    
T  8785990 atgacaaacctcttttattttaatttatgaa---ttatatattatgtcccatgtgaatttgcggttaaaattttgcccaaactcaataaaatt 8786079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 27168756 - 27168695
Alignment:
Q  30 ttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgc 91  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||  ||||||||||||    
T  27168756 ttatttcgatttatgactatttatatattatgtcaaatgtgaatttgcaatcaaaattttgc 27168695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 15730908 - 15730860
Alignment:
Q  48 atttatatattatgtcacatgtgaatttgcggtcaaaattttgctcaga 96  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  15730908 atttatatattatgtcacatgtgaatttgcattcaaaattttgctcaga 15730860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 192849 - 192899
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    ||||||||||||||||||   |||||||||||||| |||||||||||||||    
T  192849 ttttattttgatttatgattgtttatatattatgttacatgtgaatttgcg 192899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 204070 - 204119
Alignment:
Q  28 ttttattttgatttatgacaatt--tatatattatgtcacatgtgaattt 75  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  204070 ttttattttgatttatgactattattatatattatgtcacatgtgaattt 204119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 23244537 - 23244443
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttc 110  Q
    ||||||| ||| ||||||||  ||||||| | |||||||||||||||| ||||| |||||||| | ||| |||| ||||  ||| ||||||||||    
T  23244537 atgacgagcctcttttatttcaatttatggctatttatatattatgtcgcatgtaaatttgcgattaaattttttctcatgctctataaaatttc 23244443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 28801941 - 28802003
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||| |||||| ||||||||  |||||||||  ||||||||||||||| ||||||||||||||    
T  28801941 atgaggaacctcttttatttcaatttatgactgtttatatattatgtcgcatgtgaatttgcg 28802003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 13819086 - 13819130
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||    
T  13819086 tatttcgatttatgactgtttatatattatgtcacatgtgaattt 13819130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 1775423 - 1775380
Alignment:
Q  32 attttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    |||| ||||||||||  |||||||||||||||||||||||||||    
T  1775423 atttcgatttatgactgtttatatattatgtcacatgtgaattt 1775380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 12098091 - 12098052
Alignment:
Q  51 tatatattatgtcacatgtgaatttgcggtcaaaattttg 90  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  12098091 tatatattatgtcacatgtgaatttacggttaaaattttg 12098052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 26282368 - 26282330
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  26282368 gatttatgactgtttatatattatgtcacatgtgaattt 26282330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 36292660 - 36292622
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  36292660 gatttatgactgtttatatattatgtcacatgtgaattt 36292622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 2985781 - 2985825
Alignment:
Q  13 aatatgacgaaccttttttattttgatttatgacaatttatatatt 58  Q
    |||||||||| |||||| |||||||||||||||| |||||||||||    
T  2985781 aatatgacgatcctttt-tattttgatttatgactatttatatatt 2985825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 14317069 - 14317102
Alignment:
Q  24 ccttttttattttgatttatgacaatttatatat 57  Q
    ||||||||||||||||||||||| ||||||||||    
T  14317069 ccttttttattttgatttatgactatttatatat 14317102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 22542141 - 22542198
Alignment:
Q  51 tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatt 108  Q
    |||||||||||||| || |||||||||| | |||||||||| ||||||| | ||||||    
T  22542141 tatatattatgtcatatatgaatttgcgataaaaattttgcccagactctagaaaatt 22542198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 39435826 - 39435866
Alignment:
Q  35 ttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||||  |||||||||||| ||||||||||||||    
T  39435826 ttgatttatgactgtttatatattatttcacatgtgaattt 39435866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 39656576 - 39656532
Alignment:
Q  31 tattttgatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||| ||||||||||  |||||||||||| ||||||||||||||    
T  39656576 tatttcgatttatgactgtttatatattatatcacatgtgaattt 39656532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0726 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 1103 - 1186
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttct 111  Q
    |||||||||||||| |||  ||||||| ||||||||||||||||||||| |||||||||||| | || |||| ||| |||||||    
T  1103 ttttattttgatttgtgattatttataaattatgtcacatgtgaatttgtggtcaaaattttacccacactctatataatttct 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 1616 - 1679
Alignment:
Q  28 ttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgc 91  Q
    |||||||| |||||||||| |||||||||||||||   ||| ||||||||||||||||||||||    
T  1616 ttttatttcgatttatgactatttatatattatgttgtatgcgaatttgcggtcaaaattttgc 1679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 9284 - 9390
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatt--tatatattatgtcacatgtgaatttgcggtcaaaattttgctcagactcgat-aaaatttcta 112  Q
    ||||||||||| ||||||||| ||||||||| |||  ||||||||||||||||| | |||||||| | ||  ||||| |||||||| || |||||| |||    
T  9284 atgacgaacctcttttattttaatttatgactatttatatatattatgtcacatatcaatttgcgataaactttttgttcagactctataaaaattccta 9383  T
Q  113 gctccgc 119  Q
    |||||||    
T  9384 gctccgc 9390  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 214128 - 214023
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatat--tatgtcacatgtgaatttgcggtcaaaattttgctcagactcgataaaatttctag 113  Q
    |||| |||||| |||||||| |||||||||| ||||||||||  |||||||||| |||||||||| | ||  |||||| ||  ||| |||||||| ||||    
T  214128 atgaagaacctcttttatttcgatttatgactatttatatatattatgtcacatatgaatttgcgataaactttttgcccaagctctataaaattcctag 214029  T
Q  114 ctccgc 119  Q
    ||||||    
T  214028 ctccgc 214023  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 134821 - 134757
Alignment:
Q  16 atgacgaaccttttttattttgatttatgacaatttatatat--tatgtcacatgtgaatttgcg 78  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||  |||||||||||||||||||||    
T  134821 atgacgatcctcttttattttgatatatgactatttatatatattatgtcacatgtgaatttgcg 134757  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 435313 - 435241
Alignment:
Q  19 acgaaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcggtcaaaattttgc 91  Q
    |||| ||| ||| |||| ||||||| || |||||||||||||||||||||||||||||  || ||||||||||    
T  435313 acgagcctatttaatttcgatttataactatttatatattatgtcacatgtgaatttgaagttaaaattttgc 435241  T

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Target: scaffold0154 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 32287 - 32343
Alignment:
Q  22 aaccttttttattttgatttatgacaatttatatattatgtcacatgtgaatttgcg 78  Q
    |||||||||||||| |||||||||   |||||||||||||||| | |||||||||||    
T  32287 aaccttttttatttcgatttatgattgtttatatattatgtcataagtgaatttgcg 32343  T

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Target: scaffold0069 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 18686 - 18724
Alignment:
Q  37 gatttatgacaatttatatattatgtcacatgtgaattt 75  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  18686 gatttatgactgtttatatattatgtcacatgtgaattt 18724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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