View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12950_low_11 (Length: 257)

Name: NF12950_low_11
Description: NF12950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12950_low_11
NF12950_low_11
[»] chr3 (62 HSPs)
chr3 (9-179)||(20840920-20841090)
chr3 (9-179)||(4275723-4275893)
chr3 (9-179)||(37727289-37727459)
chr3 (9-179)||(22424830-22425000)
chr3 (9-179)||(27393677-27393847)
chr3 (9-179)||(43973799-43973969)
chr3 (16-179)||(39555594-39555757)
chr3 (9-174)||(29801775-29801940)
chr3 (11-170)||(41047060-41047218)
chr3 (9-179)||(5137340-5137510)
chr3 (9-179)||(31778669-31778839)
chr3 (17-168)||(26837387-26837538)
chr3 (9-179)||(17464507-17464677)
chr3 (9-179)||(25853250-25853420)
chr3 (9-179)||(32534975-32535145)
chr3 (9-179)||(23644823-23644994)
chr3 (9-175)||(24300576-24300742)
chr3 (21-179)||(30098134-30098292)
chr3 (9-168)||(26274594-26274753)
chr3 (31-179)||(31779034-31779181)
chr3 (32-179)||(20840576-20840722)
chr3 (32-179)||(39555960-39556106)
chr3 (39-173)||(48453011-48453144)
chr3 (32-179)||(5136996-5137142)
chr3 (32-179)||(37726945-37727091)
chr3 (32-179)||(41046716-41046862)
chr3 (32-179)||(24300939-24301085)
chr3 (32-179)||(23644478-23644624)
chr3 (32-179)||(27393960-27394106)
chr3 (32-179)||(43973457-43973603)
chr3 (32-179)||(32535342-32535492)
chr3 (78-173)||(29801378-29801473)
chr3 (32-174)||(25853610-25853751)
chr3 (32-179)||(26837739-26837884)
chr3 (45-179)||(22425209-22425342)
chr3 (69-179)||(25612396-25612506)
chr3 (32-171)||(26274950-26275087)
chr3 (32-179)||(30104498-30104643)
chr3 (69-179)||(51474753-51474863)
chr3 (32-179)||(17464874-17465021)
chr3 (69-172)||(23228427-23228529)
chr3 (78-179)||(32697128-32697229)
chr3 (32-90)||(55192222-55192279)
chr3 (81-170)||(18010176-18010265)
chr3 (69-174)||(50116828-50116933)
chr3 (32-107)||(27200076-27200150)
chr3 (32-107)||(36701480-36701554)
chr3 (32-102)||(37075781-37075850)
chr3 (81-179)||(51473444-51473542)
chr3 (98-173)||(25419166-25419242)
chr3 (23-107)||(37076049-37076133)
chr3 (119-179)||(37222040-37222100)
chr3 (34-101)||(8873784-8873850)
chr3 (33-96)||(50900913-50900975)
chr3 (32-101)||(49408167-49408233)
chr3 (34-107)||(2323466-2323538)
chr3 (78-179)||(37220573-37220674)
chr3 (32-90)||(49407900-49407957)
chr3 (34-71)||(32730775-32730812)
chr3 (69-117)||(25420560-25420608)
chr3 (32-96)||(37847204-37847267)
chr3 (34-102)||(40275187-40275255)
[»] chr8 (30 HSPs)
chr8 (9-179)||(13224998-13225168)
chr8 (9-179)||(12572210-12572380)
chr8 (9-179)||(41681493-41681663)
chr8 (9-179)||(9928925-9929095)
chr8 (9-179)||(19176306-19176476)
chr8 (9-179)||(11656816-11656986)
chr8 (9-179)||(44831263-44831433)
chr8 (9-179)||(33328499-33328669)
chr8 (9-179)||(31133579-31133749)
chr8 (9-179)||(33742938-33743107)
chr8 (44-179)||(34540942-34541077)
chr8 (44-176)||(4629816-4629948)
chr8 (35-179)||(41681150-41681292)
chr8 (32-179)||(19176673-19176819)
chr8 (32-179)||(12571879-12572026)
chr8 (32-179)||(11656471-11656618)
chr8 (32-173)||(13224663-13224802)
chr8 (32-179)||(33328174-33328320)
chr8 (32-179)||(9930040-9930186)
chr8 (32-179)||(31133236-31133382)
chr8 (32-179)||(44831628-44831774)
chr8 (9-103)||(9177724-9177818)
chr8 (32-148)||(33743302-33743417)
chr8 (32-179)||(9178019-9178164)
chr8 (87-173)||(11336959-11337045)
chr8 (32-173)||(4630175-4630309)
chr8 (69-116)||(43958264-43958311)
chr8 (32-90)||(18805267-18805324)
chr8 (69-174)||(10918147-10918252)
chr8 (83-179)||(8073985-8074080)
[»] chr7 (31 HSPs)
chr7 (9-179)||(19590884-19591054)
chr7 (9-179)||(38859000-38859170)
chr7 (9-179)||(19830779-19830948)
chr7 (9-179)||(32004630-32004800)
chr7 (9-179)||(37787126-37787296)
chr7 (9-174)||(2658860-2659025)
chr7 (9-173)||(35288925-35289089)
chr7 (9-179)||(29099866-29100036)
chr7 (9-179)||(4641803-4641970)
chr7 (9-179)||(34533807-34533977)
chr7 (12-179)||(23952746-23952914)
chr7 (32-179)||(19830436-19830582)
chr7 (32-179)||(19590541-19590687)
chr7 (32-179)||(37786783-37786929)
chr7 (32-179)||(34534174-34534320)
chr7 (32-179)||(29100234-29100380)
chr7 (32-179)||(32004997-32005143)
chr7 (32-179)||(38858659-38858805)
chr7 (32-174)||(35289284-35289425)
chr7 (32-179)||(2659223-2659369)
chr7 (32-179)||(23953112-23953258)
chr7 (32-179)||(4641456-4641602)
chr7 (32-174)||(4478083-4478224)
chr7 (69-179)||(28583455-28583565)
chr7 (9-96)||(4477800-4477887)
chr7 (79-179)||(38160967-38161067)
chr7 (69-174)||(28584341-28584446)
chr7 (32-107)||(35578986-35579060)
chr7 (35-107)||(9393823-9393894)
chr7 (32-90)||(32427404-32427461)
chr7 (34-103)||(9181623-9181692)
[»] chr4 (60 HSPs)
chr4 (9-179)||(46193421-46193591)
chr4 (9-179)||(22434195-22434365)
chr4 (9-179)||(45082783-45082953)
chr4 (9-174)||(51021155-51021319)
chr4 (9-179)||(11153162-11153332)
chr4 (9-179)||(15523251-15523421)
chr4 (9-179)||(18751615-18751785)
chr4 (9-179)||(23494802-23494972)
chr4 (9-179)||(12234688-12234858)
chr4 (9-179)||(20470870-20471040)
chr4 (9-179)||(25447263-25447433)
chr4 (9-179)||(54995085-54995255)
chr4 (14-179)||(48526545-48526710)
chr4 (9-171)||(25938030-25938192)
chr4 (9-171)||(2118317-2118480)
chr4 (9-179)||(4219918-4220088)
chr4 (9-174)||(12503457-12503622)
chr4 (32-179)||(33109700-33109846)
chr4 (32-179)||(11153530-11153676)
chr4 (33-179)||(48526212-48526356)
chr4 (32-173)||(25447619-25447759)
chr4 (35-179)||(4219573-4219716)
chr4 (32-179)||(22434561-22434705)
chr4 (32-179)||(23494459-23494605)
chr4 (32-179)||(25937686-25937832)
chr4 (32-179)||(38962202-38962348)
chr4 (32-179)||(46193788-46193934)
chr4 (69-179)||(33109883-33109993)
chr4 (32-173)||(15523617-15523757)
chr4 (35-179)||(12234345-12234488)
chr4 (31-179)||(22170319-22170465)
chr4 (32-170)||(51020822-51020959)
chr4 (32-173)||(45082454-45082592)
chr4 (78-174)||(35363028-35363125)
chr4 (78-179)||(44892576-44892677)
chr4 (81-179)||(18763951-18764049)
chr4 (32-173)||(2118679-2118818)
chr4 (78-174)||(43243708-43243804)
chr4 (69-140)||(43242325-43242396)
chr4 (80-179)||(54995498-54995596)
chr4 (69-174)||(43281210-43281314)
chr4 (78-174)||(20958288-20958383)
chr4 (32-127)||(12503819-12503913)
chr4 (81-176)||(48713777-48713872)
chr4 (69-171)||(16690960-16691062)
chr4 (69-171)||(16691491-16691592)
chr4 (32-107)||(17504061-17504135)
chr4 (125-179)||(16318251-16318305)
chr4 (81-179)||(48293610-48293708)
chr4 (89-171)||(48708319-48708401)
chr4 (69-173)||(48294961-48295066)
chr4 (32-96)||(17504343-17504407)
chr4 (32-96)||(35193406-35193469)
chr4 (23-107)||(40160466-40160549)
chr4 (69-171)||(44890541-44890643)
chr4 (83-179)||(20957205-20957301)
chr4 (35-90)||(35193691-35193744)
chr4 (87-174)||(55189549-55189636)
chr4 (34-110)||(24336149-24336224)
chr4 (78-134)||(44220805-44220861)
[»] chr6 (38 HSPs)
chr6 (9-179)||(11445346-11445516)
chr6 (9-179)||(12935173-12935343)
chr6 (9-179)||(22219712-22219882)
chr6 (32-173)||(10899961-10900102)
chr6 (9-179)||(18504935-18505105)
chr6 (9-174)||(31470336-31470501)
chr6 (9-179)||(20741460-20741633)
chr6 (9-179)||(23075487-23075657)
chr6 (9-179)||(2319688-2319857)
chr6 (9-179)||(18257496-18257666)
chr6 (23-179)||(15827654-15827811)
chr6 (9-174)||(4811616-4811780)
chr6 (32-179)||(10900313-10900459)
chr6 (32-179)||(18257153-18257299)
chr6 (32-179)||(20741116-20741262)
chr6 (34-172)||(11276613-11276751)
chr6 (33-171)||(31470700-31470837)
chr6 (32-179)||(11276965-11277111)
chr6 (32-179)||(12935540-12935686)
chr6 (32-179)||(15828024-15828170)
chr6 (32-179)||(28472653-28472798)
chr6 (32-179)||(29859842-29859987)
chr6 (32-173)||(2322602-2322741)
chr6 (32-179)||(1149814-1149961)
chr6 (35-179)||(18505305-18505448)
chr6 (32-179)||(11445003-11445149)
chr6 (69-171)||(3835145-3835247)
chr6 (82-174)||(29035069-29035161)
chr6 (98-179)||(23074015-23074096)
chr6 (78-174)||(18296166-18296262)
chr6 (32-168)||(4811399-4811534)
chr6 (69-179)||(29033450-29033560)
chr6 (107-174)||(1149486-1149553)
chr6 (9-65)||(1149558-1149614)
chr6 (34-102)||(35163572-35163639)
chr6 (16-82)||(32836114-32836179)
chr6 (34-102)||(31573817-31573885)
chr6 (32-96)||(32836381-32836444)
[»] chr5 (53 HSPs)
chr5 (9-179)||(19359495-19359665)
chr5 (9-179)||(5818945-5819115)
chr5 (9-179)||(8647797-8647967)
chr5 (11-179)||(14215257-14215425)
chr5 (9-179)||(8461290-8461460)
chr5 (9-171)||(2864778-2864940)
chr5 (9-171)||(29454764-29454926)
chr5 (9-173)||(18182992-18183156)
chr5 (9-179)||(24331575-24331747)
chr5 (9-170)||(25000448-25000609)
chr5 (9-179)||(164207-164376)
chr5 (9-179)||(16018946-16019116)
chr5 (16-171)||(15709335-15709489)
chr5 (32-179)||(8647454-8647600)
chr5 (32-179)||(2865138-2865284)
chr5 (32-179)||(18183352-18183498)
chr5 (33-179)||(5819313-5819458)
chr5 (32-171)||(15708995-15709132)
chr5 (32-179)||(19359152-19359298)
chr5 (32-179)||(24362219-24362365)
chr5 (32-179)||(29455125-29455271)
chr5 (9-174)||(15371892-15372060)
chr5 (32-179)||(15372256-15372402)
chr5 (32-173)||(8460952-8461092)
chr5 (9-170)||(24361862-24362022)
chr5 (9-170)||(24325237-24325397)
chr5 (32-179)||(14215626-14215772)
chr5 (32-170)||(164574-164711)
chr5 (32-174)||(14463904-14464044)
chr5 (182-256)||(24332139-24332213)
chr5 (33-173)||(25000112-25000251)
chr5 (34-110)||(14462689-14462769)
chr5 (32-170)||(24331943-24332083)
chr5 (78-174)||(4219684-4219780)
chr5 (12-107)||(10721873-10721967)
chr5 (69-170)||(6019189-6019290)
chr5 (78-173)||(4623170-4623265)
chr5 (16-107)||(27307148-27307238)
chr5 (69-179)||(7349436-7349546)
chr5 (78-179)||(4222150-4222251)
chr5 (34-168)||(16752955-16753089)
chr5 (67-179)||(6018330-6018441)
chr5 (9-148)||(28494891-28495029)
chr5 (78-173)||(16018611-16018705)
chr5 (69-179)||(7348575-7348685)
chr5 (23-101)||(41834434-41834511)
chr5 (69-174)||(4624644-4624749)
chr5 (32-96)||(28495225-28495288)
chr5 (32-96)||(32305916-32305979)
chr5 (33-90)||(27307443-27307499)
chr5 (34-96)||(22651443-22651505)
chr5 (78-110)||(13814155-13814187)
chr5 (32-96)||(16752680-16752743)
[»] chr1 (47 HSPs)
chr1 (9-179)||(17433574-17433744)
chr1 (9-179)||(5539832-5540002)
chr1 (9-179)||(15173453-15173622)
chr1 (9-179)||(33143933-33144103)
chr1 (9-171)||(18984478-18984640)
chr1 (9-179)||(21856058-21856228)
chr1 (9-179)||(29869978-29870148)
chr1 (9-179)||(50970294-50970464)
chr1 (32-179)||(29307324-29307471)
chr1 (9-179)||(8678557-8678727)
chr1 (9-179)||(39154379-39154549)
chr1 (32-179)||(9019345-9019492)
chr1 (8-179)||(15646208-15646379)
chr1 (9-179)||(4636330-4636500)
chr1 (23-171)||(26859083-26859231)
chr1 (11-179)||(5962594-5962762)
chr1 (32-179)||(50970661-50970807)
chr1 (32-179)||(5540201-5540347)
chr1 (32-179)||(15646578-15646724)
chr1 (32-179)||(18984135-18984281)
chr1 (32-174)||(29306974-29307115)
chr1 (9-117)||(17112359-17112467)
chr1 (32-179)||(33144302-33144448)
chr1 (32-179)||(8678925-8679070)
chr1 (32-179)||(15173112-15173258)
chr1 (32-179)||(21856426-21856572)
chr1 (32-179)||(29869636-29869782)
chr1 (45-179)||(9018989-9019122)
chr1 (32-179)||(5962961-5963107)
chr1 (32-179)||(17433232-17433378)
chr1 (32-174)||(26859443-26859583)
chr1 (182-256)||(39153915-39153989)
chr1 (32-170)||(39154044-39154181)
chr1 (69-179)||(52268306-52268416)
chr1 (32-135)||(4636033-4636134)
chr1 (95-170)||(47827033-47827108)
chr1 (32-102)||(17088243-17088312)
chr1 (79-179)||(52269177-52269277)
chr1 (45-107)||(45048533-45048594)
chr1 (32-96)||(17088524-17088587)
chr1 (38-107)||(44291701-44291769)
chr1 (32-96)||(45048253-45048316)
chr1 (112-171)||(2733419-2733478)
chr1 (32-107)||(44802555-44802629)
chr1 (34-102)||(8229732-8229800)
chr1 (34-102)||(17641750-17641818)
chr1 (32-96)||(39485163-39485226)
[»] chr2 (40 HSPs)
chr2 (9-179)||(18450846-18451016)
chr2 (9-179)||(28616973-28617143)
chr2 (9-174)||(43058692-43058856)
chr2 (9-179)||(40815361-40815531)
chr2 (11-179)||(40027501-40027669)
chr2 (9-179)||(239711-239881)
chr2 (9-179)||(22374684-22374854)
chr2 (9-174)||(7446705-7446870)
chr2 (9-179)||(11090879-11091049)
chr2 (32-179)||(26538461-26538608)
chr2 (9-171)||(1978468-1978630)
chr2 (9-179)||(3025822-3025991)
chr2 (16-171)||(8425379-8425533)
chr2 (9-179)||(14432500-14432670)
chr2 (32-179)||(11090537-11090683)
chr2 (32-173)||(239375-239514)
chr2 (32-179)||(40815728-40815874)
chr2 (32-174)||(43058354-43058495)
chr2 (32-179)||(22374336-22374482)
chr2 (32-179)||(26538113-26538259)
chr2 (32-173)||(40027162-40027302)
chr2 (32-171)||(1978132-1978270)
chr2 (32-179)||(28616629-28616776)
chr2 (32-179)||(3025482-3025627)
chr2 (32-179)||(8425743-8425889)
chr2 (32-179)||(18451214-18451360)
chr2 (32-179)||(14432158-14432304)
chr2 (69-179)||(20444765-20444875)
chr2 (77-179)||(28847122-28847224)
chr2 (80-179)||(20440461-20440560)
chr2 (80-174)||(35781093-35781187)
chr2 (38-174)||(7446363-7446497)
chr2 (69-179)||(35779724-35779834)
chr2 (69-179)||(8972253-8972363)
chr2 (82-179)||(15551515-15551612)
chr2 (78-170)||(15552482-15552573)
chr2 (32-96)||(28143414-28143477)
chr2 (32-102)||(14942228-14942297)
chr2 (36-96)||(31797166-31797225)
chr2 (34-159)||(44219680-44219804)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-179)||(2028-2196)
scaffold0951 (32-179)||(1683-1829)
[»] scaffold0417 (2 HSPs)
scaffold0417 (16-179)||(10989-11152)
scaffold0417 (31-174)||(10642-10784)
[»] scaffold1223 (2 HSPs)
scaffold1223 (32-174)||(1123-1265)
scaffold1223 (32-173)||(775-914)
[»] scaffold0007 (5 HSPs)
scaffold0007 (9-179)||(64664-64834)
scaffold0007 (32-179)||(64318-64464)
scaffold0007 (32-168)||(205752-205886)
scaffold0007 (32-107)||(205038-205112)
scaffold0007 (32-107)||(205468-205541)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-174)||(16855-17020)
scaffold0157 (32-127)||(16564-16658)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-152)||(4246-4389)
scaffold0273 (32-173)||(4590-4730)
[»] scaffold0027 (2 HSPs)
scaffold0027 (32-177)||(42187-42332)
scaffold0027 (32-174)||(42542-42682)
[»] scaffold0295 (2 HSPs)
scaffold0295 (32-179)||(4809-4955)
scaffold0295 (23-179)||(5168-5320)
[»] scaffold0019 (1 HSPs)
scaffold0019 (32-179)||(134056-134202)
[»] scaffold0432 (2 HSPs)
scaffold0432 (78-179)||(10300-10401)
scaffold0432 (9-179)||(9948-10116)
[»] scaffold0176 (2 HSPs)
scaffold0176 (32-170)||(18860-18996)
scaffold0176 (98-179)||(19069-19150)
[»] scaffold0113 (1 HSPs)
scaffold0113 (81-173)||(28674-28766)
[»] scaffold1585 (1 HSPs)
scaffold1585 (70-174)||(588-692)
[»] scaffold0168 (1 HSPs)
scaffold0168 (69-137)||(7707-7775)
[»] scaffold1696 (1 HSPs)
scaffold1696 (79-173)||(471-565)
[»] scaffold0076 (1 HSPs)
scaffold0076 (92-170)||(8451-8529)
[»] scaffold0057 (1 HSPs)
scaffold0057 (69-174)||(61877-61982)


Alignment Details
Target: chr3 (Bit Score: 139; Significance: 8e-73; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 20840920 - 20841090
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840920 agcataggggtatatctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 20841019  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  20841020 ttgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcacca 20841090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 4275723 - 4275893
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275723 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 4275822  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||||||||||| ||||||||||||||  |||  |||||||| ||||||||||||||||||||| ||||    
T  4275823 ttaaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggacca 4275893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 37727289 - 37727459
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727289 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 37727388  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| ||||||||||||||  |||| |||||||| ||||||||||||||||| ||| ||||    
T  37727389 ttgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggacca 37727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 22425000 - 22424830
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22425000 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 22424901  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| | |||||||||||| || |||||||  ||||||||||||||    
T  22424900 ttgaaggaccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaacca 22424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 27393847 - 27393677
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  27393847 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataa 27393748  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||    
T  27393747 ttgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggacca 27393677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 43973799 - 43973969
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  43973799 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 43973898  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || || |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  43973899 ttgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggacca 43973969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 39555757 - 39555594
Alignment:
Q  16 gggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaagg 115  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  39555757 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaagg 39555658  T
Q  116 accgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| ||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  39555657 accattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 39555594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 29801775 - 29801940
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29801775 agcatagaggtaggtctaaaaccgtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 29801874  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || || |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||| |||||    
T  29801875 ttgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgag 29801940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 41047060 - 41047218
Alignment:
Q  11 cataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41047060 catatgggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 41047159  T
Q  111 aaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
     ||||| |||||  ||||||||||||| | |||||||||||| |||||||||||||||||    
T  41047160 gaagga-cgttttattctgttttaaaaggacagaaccagtttcgtgagtaggccaaaaca 41047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 5137340 - 5137510
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||| ||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  5137340 agcatgggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataa 5137439  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| ||||| |||||||| ||||||||||||||  |||||||||||||||||||| ||||    
T  5137440 ttgaaggaccattttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggacca 5137510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 31778839 - 31778669
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31778839 agcatacgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 31778740  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
       ||||||||||| |||||||||||||| ||||| ||||||||  ||||||| |||||||||||| ||||    
T  31778739 acgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggacca 31778669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 26837538 - 26837387
Alignment:
Q  17 ggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaagga 116  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26837538 ggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga 26837439  T
Q  117 ccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    |||||||||| |||| ||||| ||||| |||| ||| |||||||||||||||    
T  26837438 ccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaa 26837387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 17464677 - 17464507
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||| |||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17464677 agcataggggtaggtctaacaccgcctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 17464578  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| | || |||||||||||||||| ||||    
T  17464577 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggacca 17464507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 25853420 - 25853250
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||| ||| |||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25853420 agcatagggataggtctaaaaccgcctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 25853321  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| ||||| |||||||| ||||  |||| ||| ||||||||||||||||||||| ||||    
T  25853320 ttgaaggaccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggacca 25853250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 32535145 - 32534975
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| || | |||||||| ||||||||| |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32535145 agcataggggaaggtataaaaccgcctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 32535046  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||||| ||||    
T  32535045 ttgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggacca 32534975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 23644823 - 23644994
Alignment:
Q  9 agcataggggt-agatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||||| || |||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  23644823 agcataggggttaggtctaaaaccgcctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgata 23644922  T
Q  108 attaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| || |||||||| |||||||||||||| || || |||| ||| ||||||||||||||||||||| ||||    
T  23644923 attgaatgaccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggacca 23644994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 24300742 - 24300576
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  24300742 agcatatgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataa 24300643  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgaga 175  Q
    || ||| |||||||  ||||||||||||| | ||| |||||||| |||| || ||||||||||||||    
T  24300642 ttgaagaaccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacgaga 24300576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 30098134 - 30098292
Alignment:
Q  21 gatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 120  Q
    |||||||||||| ||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  30098134 gatctaaaaccgcctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccat 30098233  T
Q  121 ttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || |||||||||||||| ||||  |||||||| ||||||| | ||||||||||| ||||    
T  30098234 tttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggacca 30098292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 26274753 - 26274594
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||  |||| |||||||| | ||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26274753 agcatagacgtaggtctaaaactgcctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataa 26274654  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||||    
T  26274653 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaa 26274594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 31779034 - 31779181
Alignment:
Q  31 cgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgt 130  Q
    |||||||||||| ||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  31779034 cgtctaaaactgacatttctctgcgtttttggagaat-aaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgt 31779132  T
Q  131 tttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  31779133 tttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 31779181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 20840722 - 20840576
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||||||||  ||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||    
T  20840722 gtctaaaactgtcatttctctgcgtttaaggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 20840624  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  20840623 ttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacca 20840576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 39555960 - 39556106
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||| |||||||||||| ||||||| ||| ||||||||    
T  39555960 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggaccattttgttctgtt 39556058  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  39556059 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 39556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 48453144 - 48453011
Alignment:
Q  39 actgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaa 138  Q
    |||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||     
T  48453144 actgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaat 48453046  T
Q  139 ggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    ||||| |||||||| ||||||||||||||||||||    
T  48453045 ggcaggaccagtttcgtgagtaggccaaaacacga 48453011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 5137142 - 5136996
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  5137142 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 5137044  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||| ||| |||||| |||||||||||||| ||||    
T  5137043 ttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggacca 5136996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 37727091 - 37726945
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  37727091 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtt 37726993  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| |||||||||||||| || || || |||||||||||| ||||    
T  37726992 ttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggacca 37726945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 41046862 - 41046716
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  41046862 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 41046764  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| || | |||||||||||||||| ||||    
T  41046763 ttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggacca 41046716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 24300939 - 24301085
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |  ||||||||||| ||| ||||    
T  24300939 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttttgtt 24301037  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  24301038 ttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggacca 24301085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 23644624 - 23644478
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||   |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| |||||| |||| ||||||||    
T  23644624 gtctaaaactattatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtt 23644526  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| ||| ||||||||||||||| ||||| ||||    
T  23644525 ttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggacca 23644478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 27393960 - 27394106
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||| | ||||||||||||||||||||||| ||||| ||||| ||||||||    
T  27393960 gtctaaaactgttatttctctgcgtttttggagaat-aaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtt 27394058  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||||||||| |||  ||| ||||||||||||||||||||| ||||    
T  27394059 ttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggacca 27394106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 43973603 - 43973457
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  43973603 gtctaaaactgttatttatctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 43973505  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| |||| || || ||| ||||||||| ||||||||||| ||||    
T  43973504 ttaaaagggcataatcattttcgtgagtaggacaaaacacgaggacca 43973457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 32535342 - 32535492
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat-----gataattaaaggaccgtttcgtt 126  Q
    ||||||||||  ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||     ||||||| ||||||||||| |||    
T  32535342 gtctaaaactatcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatttaatgataattgaaggaccgttttgtt 32535439  T
Q  127 ctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  32535440 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 32535492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 29801473 - 29801378
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  29801473 ggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 25853610 - 25853751
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  25853610 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 25853708  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| | ||  |||||||| ||||||||  |||||||||||    
T  25853709 ttaaaatgacaagaccagtttcgtgagtagagcaaaacacgag 25853751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 26837739 - 26837884
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| || |||||||| ||||||||||||||||||||| || || |||||||| ||||| ||    
T  26837739 gtctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgttctatt 26837837  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| |||||||||||||| || |||||||||||||||||| ||||    
T  26837838 tt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggacca 26837884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 179
Target Start/End: Original strand, 22425209 - 22425342
Alignment:
Q  45 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcaga 144  Q
    |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| || ||||      
T  22425209 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatg 22425307  T
Q  145 accagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||| || ||||||||||| ||||||||| ||||    
T  22425308 accagattcgtgagtaggccgaaacacgaggacca 22425342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 25612396 - 25612506
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||| ||||| |||| ||| ||||||||| |||||    
T  25612396 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaa 25612495  T
Q  169 cacgagaacca 179  Q
    |||||| ||||    
T  25612496 cacgaggacca 25612506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 26274950 - 26275087
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||||| || |||||  | ||||| || |||||||||||||| |||||||||||||||||| | |||||||||  |||||||    
T  26274950 gtctaaaactgtcatttctctgcggttttggagaat-aaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggaccgttttattctgtt 26275047  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    |||||| || || |||||||| ||||||||| ||||||||    
T  26275048 ttaaaagggtaggaccagtttcgtgagtaggtcaaaacac 26275087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 30104643 - 30104498
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| | ||   | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||   || ||||    
T  30104643 gtctaaaactgtcatttctctgcgtttttagataat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattttgtt 30104546  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| ||| ||||||||| ||||||||||| ||||    
T  30104545 ttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggacca 30104498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 51474753 - 51474863
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||||  ||| ||| |||||||||| ||||  |||| ||| ||||||| |||||||    
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  169 cacgagaacca 179  Q
    |||| ||||||    
T  51474853 cacgggaacca 51474863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 17464874 - 17465021
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa-atgcaacaaaaatgataattaaaggaccgtttcgttctgt 130  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| || |||||||| |||| |||||||||||||||||||| ||||||||||| ||||| |    
T  17464874 gtctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctat 17464972  T
Q  131 tttaaaaagg-cagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||| || ||| ||||||||  || ||||||||||||||||| ||||    
T  17464973 tttaaaagggtcag-accagtttcatgcgtaggccaaaacacgaggacca 17465021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 23228427 - 23228529
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||  ||| |||| ||||||||| ||||  | || ||| |||||||||||||||    
T  23228427 aaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaa 23228525  T
Q  169 cacg 172  Q
    ||||    
T  23228526 cacg 23228529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 32697128 - 32697229
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 177  Q
    ||||||||||||||||||||||||||||||||| ||| ||  ||| |||||||||||||| |||   || | ||| |||||||||| |||||||||| ||    
T  32697128 ggtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggac 32697227  T
Q  178 ca 179  Q
    ||    
T  32697228 ca 32697229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 55192279 - 55192222
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  55192279 gtctaaaactgtcatttctctgcgtttctggag-ttgaaaataggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 18010176 - 18010265
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    |||||||||||||||||||||||||||||| ||  ||  ||| |||||||||||||| ||| |||||| ||| |||||||| | ||||||    
T  18010176 aggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaaaaca 18010265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 50116828 - 50116933
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||| ||||||||||||||||| | || |||||||| ||||| ||| |||| ||||  |||| ||| ||||||| | |||||    
T  50116828 aaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaa 50116927  T
Q  169 cacgag 174  Q
    ||||||    
T  50116928 cacgag 50116933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 27200076 - 27200150
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  27200076 gtctaaacctgtcatttctctgcgtttctggag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgata 27200150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 36701480 - 36701554
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  36701480 gtctaaaactgccatttctatgtgtttctggag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgata 36701554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 37075850 - 37075781
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||| | ||||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||    
T  37075850 gtctaaaacggtcatttctctgcgtttctggag-ttgaaaataagaggtaggactaaaactgcaaaaaaaa 37075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 51473542 - 51473444
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||| |||| |||||||||||||||||   ||||||  ||| |||||||||||||| ||||| |||| ||| |||| ||| |||||||||||| ||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggacca 51473444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 25419242 - 25419166
Alignment:
Q  98 aaaaatgataatt-aaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    ||||||||||||| ||||||| |||| |||||||||||||| |||||||| | ||| ||||||| || |||||||||    
T  25419242 aaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagctaaaacacga 25419166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 37076049 - 37076133
Alignment:
Q  23 tctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| | ||||||||||||||||||| ||||||| |||||  ||||||| ||||| ||| ||||||| || ||| ||||||    
T  37076049 tctaaaactgcctaaaactgccatttctctacgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgata 37076133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 37222040 - 37222100
Alignment:
Q  119 gtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||| |||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggacca 37222100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 8873850 - 8873784
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    ||||||||| |||||||||||||||||| || |||||||||||||||| ||| |||| ||||| ||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggaggtaagactaaaactgcaaaaaaa 8873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 50900913 - 50900975
Alignment:
Q  33 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| |||| |||||    
T  50900913 tctaaaactgcaatttctttgcgtttatggagtt-gaaaataggaggtaggacaaaaactgcaa 50900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 49408167 - 49408233
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    ||||||||||||||||||| ||||||||||||| ||||||||  |||||||||| |||| ||||| ||||    
T  49408167 gtctaaaactgccatttctttgcgtttctggag-ttgaaaat--gaggtaggactaaaactgcaaaaaaa 49408233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 2323538 - 2323466
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||| ||||| || | |||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  2323538 ctaaaactgtcatttatccgtgtttctggagtt-gaaaataggaggtaggactaaaattgcaaaaaacatgata 2323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 37220674 - 37220573
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 177  Q
    ||||||||||||| ||||||||||||||||| | ||||||  |||  |||||||||||||  |||  | |  | ||||||||||||||||| ||||| ||    
T  37220674 ggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggac 37220575  T
Q  178 ca 179  Q
    ||    
T  37220574 ca 37220573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 49407957 - 49407900
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    |||||||| || ||||||||||||||| ||||| |||||||||||||||| ||| ||||    
T  49407957 gtctaaaattgtcatttctctgcgtttttggag-ttgaaaataggaggtatgactaaaa 49407900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 32730775 - 32730812
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaa 71  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  32730775 ctaaaactgtcatttctgtgcgtttctggagtttgaaa 32730812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 25420560 - 25420608
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggac 117  Q
    ||||| || |||| ||||||||||||||||||||| |||||| ||||||    
T  25420560 aaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggac 25420608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 37847204 - 37847267
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||| || ||||||||||| |||||| || ||||||||||||| |||||| |||| |||||    
T  37847204 gtctaaaattgtcatttctctgcatttctgaag-ttgaaaataggagataggactaaaactgcaa 37847267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 40275255 - 40275187
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  40275255 ctaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaa 40275187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 13224998 - 13225168
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13224998 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 13225097  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  13225098 ttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 13225168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 12572210 - 12572380
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12572210 agcataggggtagatctaaaaccgcctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12572309  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| ||||||||||||||  |||  || ||||| |||||||| |||||||||||| ||||    
T  12572310 ttgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggacca 12572380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 41681493 - 41681663
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41681493 agcataggggtaggtctaaaaccgcctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataa 41681592  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| || || |||||||| |||| |||||||||||||||| ||||    
T  41681593 ttgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggacca 41681663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 9929095 - 9928925
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9929095 agcataagggtaggtctaaaaccgcctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataa 9928996  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||  ||||||||||| ||||    
T  9928995 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 9928925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 19176476 - 19176306
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19176476 agcatatgggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataa 19176377  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  19176376 ttgaaggaccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggacca 19176306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 11656816 - 11656986
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||| || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11656816 agcataggggtaggtctacaatcgcctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11656915  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| |||||||||||||| | | | |||||||| ||||||||||||||||||||| ||||    
T  11656916 ttgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggacca 11656986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 44831433 - 44831263
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| || |||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44831433 agcataggggcaggtctaaaaccgcctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 44831334  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |  ||||||||||| |||||||||||||| ||||| |||| ||| ||||||||||||||||| ||| ||||    
T  44831333 tggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggacca 44831263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 33328499 - 33328669
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  33328499 agcataggggtaggtttaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataa 33328598  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| ||| ||||||||||  |||  || ||||| |||||||||| |||||||||| ||||    
T  33328599 ttgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggacca 33328669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 31133579 - 31133749
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| | ||| ||||||||||  |||||| | ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  31133579 agcatagagataggtctaaaaccgcataaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataa 31133678  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  31133679 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 31133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 33743107 - 33742938
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||    
T  33743107 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataa 33743008  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || || |||||||| |||||||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||    
T  33743007 ttgaaagaccgttt-gttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggacca 33742938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 34540942 - 34541077
Alignment:
Q  44 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcag 143  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||  ||||    
T  34540942 catttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcag 34541041  T
Q  144 aaccagttttgtgagtaggccaaaacacgagaacca 179  Q
     |||||||| ||||||||||||||||||||| ||||    
T  34541042 gaccagtttcgtgagtaggccaaaacacgaggacca 34541077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 4629948 - 4629816
Alignment:
Q  44 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcag 143  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || |||||||| ||||| |||||||| |||||    
T  4629948 catttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcag 4629849  T
Q  144 aaccagttttgtgagtaggccaaaacacgagaa 176  Q
     |||||||| |||| || |||||||||||||||    
T  4629848 gaccagtttcgtgaatatgccaaaacacgagaa 4629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 41681292 - 41681150
Alignment:
Q  35 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtttta 134  Q
    |||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41681292 taaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 41681195  T
Q  135 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  41681194 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 41681150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 19176673 - 19176819
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19176673 gtctaaaactgtcatttgtctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 19176771  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||  ||||||||||||||||||||| ||||    
T  19176772 ttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggacca 19176819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 12572026 - 12571879
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgt 130  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || || ||||||||||||||||||||||||||||||| || |||||||| |||||||    
T  12572026 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgt 12571928  T
Q  131 tttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||| || ||||||||||| ||||||||||||||||||||| ||||    
T  12571927 tttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggacca 12571879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 11656618 - 11656471
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgt 130  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||    
T  11656618 gtctaaaactgccatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttcagt 11656520  T
Q  131 tttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  11656519 tttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11656471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 13224802 - 13224663
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| ||||||||||||||||| |||||  |||| ||||||||    
T  13224802 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggattgttttgttctgtt 13224704  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  13224703 ttaaaagggcag-accagtttcgtgagtaggccaaaacacga 13224663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 33328320 - 33328174
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||| ||||||| |||||  | ||||| |  |||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  33328320 gtctaaaactgtcatttctttgcgtttttggagaat-aaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 33328222  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  33328221 ttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 33328174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 9930040 - 9930186
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||  |||||||||||| || |||||  | ||||| || |||||||||||||||||||||||||||||| || ||||||| ||| ||||| ||    
T  9930040 gtctaaaactatcatttctctgcgcttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctatt 9930138  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||| ||||| ||||    
T  9930139 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggacca 9930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 31133382 - 31133236
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||| || |||||| |||| ||| ||||    
T  31133382 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttgtt 31133284  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||| | |||||||| ||||||||| ||||||||||| ||||    
T  31133283 ttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggacca 31133236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 44831628 - 44831774
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||| ||  ||||||| ||||||||    
T  44831628 gtctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgttctgtt 44831726  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  44831727 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacca 44831774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 9177818 - 9177724
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat 103  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9177818 agcataggggtaggtctaaaaccgcctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 33743302 - 33743417
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||    
T  33743302 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttctgtt 33743400  T
Q  132 ttaaaaaggcagaacca 148  Q
    |||||||||||||||||    
T  33743401 ttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 9178019 - 9178164
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||| || ||||||||||||||| | |||  | ||||| || |||| || |||||||||||||||||||||| || ||||||||||| ||||||||    
T  9178019 gtctaaaattgtcatttctctgcgttttttgagaat-aaaatggg-ggtaagatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 9178116  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||| | ||||  | |||||| ||||||||||||||||||||| ||||    
T  9178117 ttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 9178164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 11336959 - 11337045
Alignment:
Q  87 aaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||||||||||||||||||||| || ||||||||  ||||||||||||| ||| | |||| ||| ||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacga 11337045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 4630175 - 4630309
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||| ||||||||| |||||  | ||||| || ||||||| ||||||||||||||      ||||| ||||||||||   |||||||    
T  4630175 gtctaaaactgtcatttttctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaa------taattgaaggaccgttgtattctgtt 4630267  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    ||||||| |||| |||| ||| |||||||| |||||||||||    
T  4630268 ttaaaaatgcaggaccaatttcgtgagtagcccaaaacacga 4630309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 43958311 - 43958264
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaagga 116  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||    
T  43958311 aaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 18805324 - 18805267
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||| |||||||||| |||||||||| ||||| |||||||||||||| ||||    
T  18805324 gtctaaaactgtcatttctctgtgtttctggag-ttgaagataggaggtaggactaaaa 18805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 10918252 - 10918147
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || |||| || |||||||||||||||||||||| || ||||||  ||| | ||||||||||  |||||  |||| ||| ||||||||  |||||    
T  10918252 aaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagtagatcaaaa 10918153  T
Q  169 cacgag 174  Q
    ||||||    
T  10918152 cacgag 10918147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 8073985 - 8074080
Alignment:
Q  83 gacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||| |||||||||||||| |||||||| |||||   ||| |||||||||||||| | ||  | || ||| |||| |||||||||||||||| ||||    
T  8073985 gacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggacca 8074080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 19590884 - 19591054
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590884 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 19590983  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  19590984 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtacca 19591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 38859000 - 38859170
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| || |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38859000 agcataggggcaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 38859099  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |  ||||||||||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  38859100 tggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 38859170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 19830779 - 19830948
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19830779 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataa 19830877  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| ||||||| ||| |||||||||| | ||| |||||||||||||||||||||||||||||| ||||    
T  19830878 ttgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggacca 19830948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 32004800 - 32004630
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32004800 agcataggggtaggtctaaaaccgcttaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataa 32004701  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| |||||||||||||| ||||| | || ||| ||||||||||||||||||||| ||||    
T  32004700 ttgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggacca 32004630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 37787126 - 37787296
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||| | | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37787126 agcataggggtaggtctaaaactgccaaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 37787225  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| ||||||| |||||| |||||||  |||| |||||||| ||||||||||||||||||||| ||||    
T  37787226 ttgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 37787296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 2659025 - 2658860
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2659025 agcataggtgtaggtctaaaacggcctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataa 2658926  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || ||||||| ||| ||||| |||||||| ||||| |||||||| |||||||||||||||||||||    
T  2658925 ttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 2658860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 35289089 - 35288925
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||||||  |||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  35289089 agcataggggtaggtctaaaaccgcttaaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataa 35288990  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    || ||||||| ||| |||||||||||||| ||||| |||||||| ||||||||||||||| ||||    
T  35288989 ttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacga 35288925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 29100036 - 29099866
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||| ||||||||   ||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29100036 agcatagaggtaggtctaaaacttcctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 29099937  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  29099936 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 29099866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 4641803 - 4641970
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||  |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4641803 agcatagaggtatgtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataa 4641902  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| | ||| |||||   |||||||||||||||||||||| ||||    
T  4641903 ttgaaggaccgttttgttctgttttaaaaggacaggaccag---tgtgagtaggccaaaacacgaggacca 4641970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 34533977 - 34533807
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||| | |||||| || ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34533977 agcataggggtaggtctaaaactgcctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataa 34533878  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || || |||| |||  |||||||||||||  |||  |||||||| ||||||||||||||||||||| ||||    
T  34533877 ttgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggacca 34533807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 23952914 - 23952746
Alignment:
Q  12 ataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatta 111  Q
    |||||||||| | |||||| | ||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||     
T  23952914 ataggggtaggtttaaaactgcctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattg 23952815  T
Q  112 aaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagta-ggccaaaacacgagaacca 179  Q
    ||||||||||| |||||||||||||| ||||  |||| ||| ||||||| || ||||||||||| ||||    
T  23952814 aaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggacca 23952746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 19830582 - 19830436
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19830582 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 19830484  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  19830483 ttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 19830436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 19590687 - 19590541
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19590687 gtctaaaactgtcatttctctgggtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 19590589  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  19590588 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 19590541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 37786929 - 37786783
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  37786929 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtt 37786831  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  37786830 ttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 37786783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 34534174 - 34534320
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||  ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  34534174 gtctaaaactgtcatttctctgtttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 34534272  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||  ||||| | |||||| ||||||||||||||||||||||||||    
T  34534273 ttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaacca 34534320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 29100234 - 29100380
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || |||||||| |||||||||||||||||||||||| || |||||||| ||||||||    
T  29100234 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29100332  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| |||||||||||| |||||||||||| ||||    
T  29100333 ttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggacca 29100380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 32004997 - 32005143
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  32004997 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctatt 32005095  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||| ||||||||| ||| ||||    
T  32005096 ttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggacca 32005143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 38858805 - 38858659
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||| |||||||||||||||||||||||| || |||||||| ||||||||    
T  38858805 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 38858707  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  38858706 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacca 38858659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 35289284 - 35289425
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||   |||||||||||||| | |||  | ||||| || |||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  35289284 gtctaaaactattatttctctgcgtttttagagaat-aaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtt 35289382  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| ||||| |||||||| |||||||||||||||||||||    
T  35289383 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 35289425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 2659223 - 2659369
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||| || |||||||| ||||||||    
T  2659223 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 2659321  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  ||||||||  ||| ||||||||||| |||| ||||    
T  2659322 ttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggacca 2659369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 23953112 - 23953258
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  23953112 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 23953210  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| ||| | |||||||| ||||||||  ||||||||||| ||||    
T  23953211 ttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggacca 23953258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 4641602 - 4641456
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||  ||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||| ||| ||||    
T  4641602 gtctaaaactatcatttctctgcatttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtt 4641504  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    | ||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  4641503 tcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggacca 4641456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 4478083 - 4478224
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | |||  ||| | || |||||||||||||||||||||||||||| ||||||  | |  |||||||    
T  4478083 gtctaaaactgttatttctctgcgtttttggagaataaaatgagg-gataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttattctgtt 4478181  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| ||||| |||||||| |||||||||||||||||||||    
T  4478182 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 4478224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 28583565 - 28583455
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||||||||| ||||||||||||| |||||| ||||  || |||||||||| |||||||||| | |  ||||||||||||||    
T  28583565 aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaa 28583466  T
Q  169 cacgagaacca 179  Q
    |||||| ||||    
T  28583465 cacgaggacca 28583455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 4477887 - 4477800
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||| ||||||||   | ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  4477887 agcataggggtaggtctaaaactaccaaaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaa 4477800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 38161067 - 38160967
Alignment:
Q  79 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacc 178  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||| |||||||||||||| ||||| |  | ||| |||||||||||||||| |||| |||    
T  38161067 gtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggacc 38160968  T
Q  179 a 179  Q
    |    
T  38160967 a 38160967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 28584341 - 28584446
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || |||| |||||||||| ||||||||||||||||| ||||||  ||| |||||||||||||| | ||  |||| ||| |||| |||||||||     
T  28584341 aaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaag 28584440  T
Q  169 cacgag 174  Q
    ||||||    
T  28584441 cacgag 28584446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 35579060 - 35578986
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| || ||||||||||||||||||||| |||||||||||| ||||||  |||| ||||| ||| ||||||    
T  35579060 gtctaaaaatgtcatttctctgcgtttctggag-ttgaaaataggatgtaggattaaaactgcaaaaaacatgata 35578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 9393894 - 9393823
Alignment:
Q  35 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| |||||| ||| |||||||||||| |||||||||||||||||| ||||  |||| ||| ||||||    
T  9393894 taaaactgtcatttcactgtgtttctggagtt-gaaaataggaggtaggactaaaacagcaaaaaacatgata 9393823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 32427404 - 32427461
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||||| ||||| ||||    
T  32427404 gtctaaaactgtcatttctctgcgtttttagag-ttgaaaataggaggaaggactaaaa 32427461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 9181692 - 9181623
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat 103  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||||    
T  9181692 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaat 9181623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 46193591 - 46193421
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193591 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 46193492  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  46193491 ttgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 46193421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 22434365 - 22434195
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22434365 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataa 22434266  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||| ||||||||||||| ||||    
T  22434265 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggacca 22434195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 45082783 - 45082953
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45082783 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 45082882  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| ||||||| ||||||||||||| ||||    
T  45082883 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggacca 45082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 51021155 - 51021319
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51021155 agcataggggtaggtctaaaaccgcctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 51021253  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||||||||||| ||| |||||||||| ||||| |||| ||| |||||||||||||||||||||    
T  51021254 ttaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgag 51021319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 11153332 - 11153162
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11153332 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11153233  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || |||||||||||  |||| |||||||| ||||  |||| ||||||||||||||||||||||||| ||||    
T  11153232 ttgaaggaccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggacca 11153162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 15523421 - 15523251
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15523421 agcataggggtaggtctaaaaccgcataaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataa 15523322  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  15523321 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 15523251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 18751785 - 18751615
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  18751785 agcataggggtaagtctaaaaccgcctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatat 18751686  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||||| ||||    
T  18751685 ttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggacca 18751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 23494802 - 23494972
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| |||||| |||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23494802 agcataggggtaggtctaaaaccgcctaaaattgccatttctttacgtttctggagtttgagaataggatgtaggacgaaaaatgcaacaaaaatgataa 23494901  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  23494902 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 23494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 12234688 - 12234858
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||| | ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12234688 agcataggggtaggtctaaaactgcctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12234787  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  12234788 ttgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 12234858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 20470870 - 20471040
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20470870 agcataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 20470969  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || || |||||||| |||||||||||||| || |  |||||||| || |||||||||||||||||| ||||    
T  20470970 ttgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggacca 20471040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 25447433 - 25447263
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||| | |||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25447433 agcatatgggtaggtctaaaactgcctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 25447334  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||||||| ||||    
T  25447333 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggacca 25447263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 54995255 - 54995085
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54995255 agcataagggtaggtctaaaaccgcctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 54995156  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| || || || ||||| ||||||||||||| ||||||| ||||    
T  54995155 ttgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggacca 54995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 48526545 - 48526710
Alignment:
Q  14 aggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaa 113  Q
    |||||||| |||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  48526545 aggggtaggtctaaaaccgcctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaa 48526644  T
Q  114 ggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||| |||||||||||||| ||||  |||||||| |||||||| |||||||||||| ||||    
T  48526645 ggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggacca 48526710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 25938030 - 25938192
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||| ||||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25938030 agcatagaggtaggtctaaaaccgcataaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataa 25938129  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    || |||||| |||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||    
T  25938130 ttgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacac 25938192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 2118480 - 2118317
Alignment:
Q  9 agcataggg-gtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||| |||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2118480 agcatagggagtaggtctaaaaccgcctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 2118381  T
Q  108 attaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    ||| ||||||  ||| ||| |||||||||| ||||| |||| ||| ||||||||||||||||||    
T  2118380 attgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacac 2118317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 4219918 - 4220088
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||| | |||||||||| |||||||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  4219918 agcataggggtgggtctaaaaccgcctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 4220017  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || || |||| ||| ||||||||||||||  |||| | |||||| ||||||||||||||||||||| ||||    
T  4220018 ttgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggacca 4220088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 12503622 - 12503457
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||| || |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12503622 agcataggggtaggtctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12503523  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || ||||||  ||| |||||||||||||| ||| | | |||||| ||||||| | |||||||||||    
T  12503522 ttgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgag 12503457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 33109846 - 33109700
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  33109846 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 33109748  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||  |||| |||||||| ||||||| ||||||||||||| ||||    
T  33109747 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacca 33109700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 11153530 - 11153676
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  11153530 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgttctgtt 11153628  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  11153629 ttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 11153676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 48526356 - 48526212
Alignment:
Q  33 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttt 132  Q
    |||||||||| ||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  48526356 tctaaaactgtcatttctctgcatttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttt 48526259  T
Q  133 taaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||| |||||| |||||||  |||||||| ||||||||||||||||    
T  48526258 taaaagggcagagccagtttcatgagtaggtcaaaacacgagaacca 48526212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 25447619 - 25447759
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  25447619 gtctaaaactgtaatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 25447717  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  25447718 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 25447759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 4219716 - 4219573
Alignment:
Q  35 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtttta 134  Q
    |||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| |||||| |||| ||| | |||||    
T  4219716 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttttatttta 4219618  T
Q  135 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  4219617 aaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 4219573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 22434561 - 22434705
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||| |||||| |    
T  22434561 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctg-t 22434657  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  22434658 ttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggacca 22434705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 23494605 - 23494459
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||| | |||||  | ||||| || ||||||||||||||||||| ||||||||||||| |||||||| || ||||||||    
T  23494605 gtctaaaactgtcatttctctgcgtgtttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctgtt 23494507  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  23494506 ttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggacca 23494459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 25937832 - 25937686
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  25937832 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 25937734  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| |||||||||| |||||||||| ||||    
T  25937733 ttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggacca 25937686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 38962202 - 38962348
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  38962202 gtctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 38962300  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||| | |||||||| |||| ||| |||||||||||| ||||    
T  38962301 ttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggacca 38962348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 46193788 - 46193934
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| || |||||| ||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  46193788 gtctaaaactgtcaattctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgttctgtt 46193886  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  46193887 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 46193934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 33109883 - 33109993
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||| |||| ||| ||||| |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  169 cacgagaacca 179  Q
    || ||| ||||    
T  33109983 catgaggacca 33109993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 15523617 - 15523757
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| || ||||||| ||| ||| ||||    
T  15523617 gtctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttttgtt 15523715  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||| |||||||| |||||||| |||||||||||    
T  15523716 ttaaaagggcaggaccagtttcgtgagtagcccaaaacacga 15523757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 179
Target Start/End: Complemental strand, 12234488 - 12234345
Alignment:
Q  35 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtttta 134  Q
    ||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  12234488 taaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 12234390  T
Q  135 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| ||||| |||||||| |||| || ||||||||| ||| ||||    
T  12234389 aaagggcaggaccagtttcgtgaataagccaaaacaagaggacca 12234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 22170319 - 22170465
Alignment:
Q  31 cgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgt 130  Q
    |||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||| ||| |||    
T  22170319 cgtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttgt 22170417  T
Q  131 tttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||||| | || ||| || |||||| ||||||||||| ||||    
T  22170418 tttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggacca 22170465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 51020959 - 51020822
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| ||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  51020959 gtctaaaactgtcatttctctacgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtt 51020861  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    |||||| ||||| |||||||| |||| |  |||||||||    
T  51020860 ttaaaagggcaggaccagtttagtgaattagccaaaaca 51020822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 45082592 - 45082454
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||| || |||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||    
T  45082592 gtctaaaattgtcatttctctgtgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 45082495  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| |||| |||||| || |||||||| |||||||||||    
T  45082494 ttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacga 45082454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 35363028 - 35363125
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaag-gcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    ||||| ||||||||||||||||||||||||||| || |||||||| ||| | |||| ||||| ||||||||||||| |||||||||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgag 35363125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 44892576 - 44892677
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 177  Q
    |||||||||||||||||||||||||  |||||| || ||| |||| |||||||||||||| |||||||||| ||| ||||||||| ||||||||||| ||    
T  44892576 ggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggac 44892675  T
Q  178 ca 179  Q
    ||    
T  44892676 ca 44892677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 18763951 - 18764049
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||||||||||||||||||| || || |||| ||| |||||||||||||| | ||  |||||||| ||||||||||||||||||||| ||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggacca 18764049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 2118679 - 2118818
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||   |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||| ||| ||||    
T  2118679 gtctaaaactattatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtt 2118776  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| |  || ||||||||  |||| ||||||||||||||    
T  2118777 ttaaaaggataggaccagtttcatgagcaggccaaaacacga 2118818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 43243708 - 43243804
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||||| |||||||||||||||||||||||| ||| ||  ||| |||||||||||||| ||||  |||| ||| |||||||||||||||||||||    
T  43243708 ggtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgag 43243804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 43242396 - 43242325
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaagg 140  Q
    ||||| |||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||    
T  43242396 aaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaaagg 43242325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 54995498 - 54995596
Alignment:
Q  80 taggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||||||||||||||||||| ||||| || ||||||||||| ||||| |||||||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  54995498 taggacgaaaaatgcaacaaaa-tgatacttgaaggaccgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 54995596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 43281210 - 43281314
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || |||||||||||||||||||||||||| |||||| ||| ||  ||| |||||||||||||| ||||  |||| ||| |||||||||||||||    
T  43281210 aaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaa 43281308  T
Q  169 cacgag 174  Q
    ||||||    
T  43281309 cacgag 43281314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 20958288 - 20958383
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||||| |||||||||||||||||||||||| ||||||   || |||||||||||||| ||||| |||| ||| ||||||||||||||| |||||    
T  20958288 ggtaggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgag 20958383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 12503819 - 12503913
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttc 127  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  12503819 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 48713777 - 48713872
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaa 176  Q
    |||||||||||||||||||||||||||||| ||||||  ||| ||||||||||||||  |||  |||| |||  ||||||||| ||||||||||||    
T  48713777 aggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaa 48713872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 16691062 - 16690960
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||||   ||| ||| ||||||||| |||||| |||| ||| ||||||||  |||||    
T  16691062 aaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaa 16690963  T
Q  169 cac 171  Q
    |||    
T  16690962 cac 16690960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 16691491 - 16691592
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||  ||| ||| || |||||| |||||| |||| ||| ||||||||| |||||    
T  16691491 aaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgagtaggtcaaaa 16691589  T
Q  169 cac 171  Q
    |||    
T  16691590 cac 16691592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 17504135 - 17504061
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  17504135 gtctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 17504061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 16318251 - 16318305
Alignment:
Q  125 ttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||| ||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggacca 16318305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 48293708 - 48293610
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||| ||||||||||||||||||||||||| ||| ||  ||| ||| ||||||||| || ||| | || ||| ||||||| ||||||||||||| ||||    
T  48293708 aggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggacca 48293610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 48708401 - 48708319
Alignment:
Q  89 aaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    |||||||||||||||||||||| |||||| |||| ||| |||||||||| ||||| | || ||| |||  |||||||||||||    
T  48708401 aaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacac 48708319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 48294961 - 48295066
Alignment:
Q  69 aaaataggaggtaggacg-aaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaa 167  Q
    ||||| || ||||||||| |||||||||||||||||||||||| || |||  ||| ||| ||||||||| |||||  |||| ||| ||||||||  ||||    
T  48294961 aaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaa 48295060  T
Q  168 acacga 173  Q
    ||||||    
T  48295061 acacga 48295066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 17504343 - 17504407
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||| ||||||||||||||||| |||||  |||||||||||||| || |||| |||||    
T  17504343 gtctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaa 17504407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 35193469 - 35193406
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||| |||||||||||||||||| || ||||||||||||| |||||| |||| |||||    
T  35193469 gtctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggagataggactaaaactgcaa 35193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 40160466 - 40160549
Alignment:
Q  23 tctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| | ||||||||||  ||||||| ||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  40160466 tctaaaactgcctaaaactgcattttctctacgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgata 40160549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 44890643 - 44890541
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || |||| || |||||||||||||||||  ||||||||||||   ||| |||||||||||||| ||||  |||| ||| |||| |||| |||||    
T  44890643 aaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaa 44890544  T
Q  169 cac 171  Q
    |||    
T  44890543 cac 44890541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 20957301 - 20957205
Alignment:
Q  83 gacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||||||||||| |||||||| ||||||  ||| ||| ||||||||||  | |  |||| ||| ||||||| |||||||| |||| ||||    
T  20957301 gacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagtaagccaaaactcgaggacca 20957205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 35193691 - 35193744
Alignment:
Q  35 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||    
T  35193691 taaaactgccatt-ctctgcgtttctggag-ttgaaaataggaggtatgactaaaa 35193744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 55189636 - 55189549
Alignment:
Q  87 aaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    ||||||| | |||||||||||||| || |||  ||| ||||| |||||||| |||| ||||| |||| ||| |||| |||||||||||    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgag 55189549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 24336149 - 24336224
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||| ||||||||||| | ||||||||||| ||||||||| | |||||||| ||||  |||| ||| |||||||||    
T  24336149 ctaaagctgccatttctatacgtttctggag-ttgaaaatatggggtaggactaaaagagcaaaaaacatgataatt 24336224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 44220805 - 44220861
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtttta 134  Q
    ||||| |||||||||| |||||||||||||| | ||||||  ||| |||||||||||    
T  44220805 ggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 5e-68; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 11445346 - 11445516
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||| | |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11445346 agcataggggtgggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 11445445  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  11445446 ttgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacca 11445516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 12935343 - 12935173
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935343 agcataggggtatatctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 12935244  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  12935243 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 12935173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 22219712 - 22219882
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22219712 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 22219811  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  22219812 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 22219882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 10900102 - 10899961
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10900102 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 10900003  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  10900002 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 10899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 18505105 - 18504935
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||| || ||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  18505105 agcataggggtaggtctaaaatcgcctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataa 18505006  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  18505005 ttgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggacca 18504935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 31470501 - 31470336
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31470501 agcataggggtaggtctaaaatcgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataa 31470402  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || || ||| |||| ||||||||||||||  |||  |||||||| |||||||||||||||||||||    
T  31470401 ttgaatgactgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgag 31470336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 20741460 - 20741633
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgc---aacaaaaatga 105  Q
    ||||||||||||| |||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||    
T  20741460 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatga 20741559  T
Q  106 taattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||| ||||||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  20741560 taattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 20741633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 23075487 - 23075657
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||| | ||||||||| ||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  23075487 agcataagggtaggtctaaaactgcctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 23075586  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  23075587 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 23075657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 2319857 - 2319688
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||  | ||||| || |||||||||||||||||||||||||||||||    
T  2319857 agcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataa 2319759  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  2319758 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 2319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 18257496 - 18257666
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| ||| | ||||||| ||||||| |||||||||||||||||| ||||||||| ||||    
T  18257496 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctacgtgtatggagttggaaaatatgaggtaggacgaaaaatgtaacaaaaataataa 18257595  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||| ||||||||||| ||||    
T  18257596 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacca 18257666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 15827811 - 15827654
Alignment:
Q  23 tctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt-- 120  Q
    |||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||      
T  15827811 tctaaaaccgcctaaaa-tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaa 15827713  T
Q  121 ttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| |||||||||| | |||||||||||| ||||||| ||||||||||||| ||||    
T  15827712 tttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggacca 15827654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 4811616 - 4811780
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||||   |||||| |||||||| ||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||    
T  4811616 agcataggggtaggtctaaaactacctaaaattgccattt-tctgcgtttatggggtttgaaaataggaggtatgatgaaaaatgcaacaaaaatgataa 4811714  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || ||||||||||| ||||||||||||||| |||  | ||||||  ||||||||||||||||||||    
T  4811715 ttgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgag 4811780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 10900313 - 10900459
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10900313 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 10900411  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||||||||||| ||||| ||||    
T  10900412 ttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggacca 10900459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 18257299 - 18257153
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  18257299 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 18257201  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||| ||||||||||||| ||||    
T  18257200 ttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggacca 18257153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 20741262 - 20741116
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| || ||||||| ||| ||||||||    
T  20741262 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggaccattttgttctgtt 20741164  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  20741163 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 20741116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 11276751 - 11276613
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtttt 133  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||| ||||||||||    
T  11276751 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttgttctgtttt 11276652  T
Q  134 aaaaaggcagaaccagttttgtgagtaggccaaaacacg 172  Q
    |||| || || | ||||||  ||||||| ||||||||||    
T  11276651 aaaagggtaggatcagtttcatgagtagaccaaaacacg 11276613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 31470700 - 31470837
Alignment:
Q  33 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttt 132  Q
    ||||||| || ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  31470700 tctaaaattgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttt 31470798  T
Q  133 taaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    ||||| |||||||||||||| |||||||||| |||||||    
T  31470799 taaaagggcagaaccagtttcgtgagtaggctaaaacac 31470837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 11276965 - 11277111
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  11276965 gtctaaaactgtcatttctcttcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgtt 11277063  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||| ||||||||||||| ||||    
T  11277064 ttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggacca 11277111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 12935540 - 12935686
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || |||||||||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  12935540 gtctaaaactgtcatttctctgtgtttatggagaat-aaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgttctgtt 12935638  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| |||||||| |||||||| ||||||| ||||||||||||| ||||    
T  12935639 ttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggacca 12935686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 15828024 - 15828170
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  15828024 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtt 15828122  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| || |  |||||||| ||||||||||||||||||||| ||||    
T  15828123 ttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggacca 15828170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 28472798 - 28472653
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||| ||| ||||||||    
T  28472798 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 28472701  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| ||| |||||| |||||||||||||| ||||    
T  28472700 ttaaaatggcaggaccactttcgtgagttggccaaaacacgaggacca 28472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 29859987 - 29859842
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||| ||| ||||||||    
T  29859987 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 29859890  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| ||| |||||| |||||||||||||| ||||    
T  29859889 ttaaaatggcaggaccactttcgtgagttggccaaaacacgaggacca 29859842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 2322602 - 2322741
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||| |||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  2322602 gtctaaaactgtcatttctctgtgttt-tggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 2322699  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||||||||  || ||||| |||||||| |||||||||||    
T  2322700 ttaaaaaggcaagactagtttcgtgagtagaccaaaacacga 2322741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 1149814 - 1149961
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgt 130  Q
    ||||||||||| ||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |    
T  1149814 gtctaaaactgtcatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttctat 1149912  T
Q  131 tttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||| ||||  ||||||||  ||||||||| |||||||||| ||||    
T  1149913 tttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggacca 1149961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 18505305 - 18505448
Alignment:
Q  35 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtttta 134  Q
    |||||||| ||||||||| ||||  |||||  | ||||| || ||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||    
T  18505305 taaaactgtcatttctcttcgttgttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttatgtttta 18505403  T
Q  135 aaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| ||||| | |||||| |||||||| |||||||||||| ||||    
T  18505404 aaagggcaggatcagtttcgtgagtagaccaaaacacgaggacca 18505448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 11445149 - 11445003
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||| |||| | |||  | ||||| |  ||||||||||||||||||||||||||||||||| ||||||| |||  |||||||    
T  11445149 gtctaaaactgtcatttctctgtgtttttagagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttattctgtt 11445051  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||  ||||| ||||| || ||||||||||||||||||||| ||||    
T  11445050 ttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggacca 11445003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 3835145 - 3835247
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||| |||||| |||| ||| ||||||||| |||||    
T  3835145 aaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaa 3835244  T
Q  169 cac 171  Q
    |||    
T  3835245 cac 3835247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 29035069 - 29035161
Alignment:
Q  82 ggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    ||||||||||||||||||||||||||| ||||||||  ||| |||||||||||||| |||| ||||| ||| |||||||||| ||||||||||    
T  29035069 ggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgag 29035161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 23074096 - 23074015
Alignment:
Q  98 aaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||||| ||||||||||| ||||| |||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 23074015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 18296262 - 18296166
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    ||||||||||||||||||||||||||||||| | |||||| |||| |||||||||||||| ||||  | || ||||||||||| | |||||||||||    
T  18296262 ggtaggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgag 18296166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 4811534 - 4811399
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||| ||||||||| || ||  | ||||| || |||| ||||||||||| |||||||||||||||| |||||||||||  |||| ||    
T  4811534 gtctaaaactgttatttatctgcgtttttgaagaat-aaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    |||||| ||||  |||||||| |||||||| ||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaa 4811399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 29033560 - 29033450
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||| ||||  ||||||||||||||||| | |||||| |||| |||||||||||||| ||||| |||| ||| ||||| |||||||||    
T  29033560 aaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 29033461  T
Q  169 cacgagaacca 179  Q
     ||||| ||||    
T  29033460 tacgaggacca 29033450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 1149553 - 1149486
Alignment:
Q  107 aattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||| ||||||| ||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 1149486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 1149614 - 1149558
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagt 65  Q
    ||||||||||||| ||||||| || |||||||||| ||||||||| |||||||||||    
T  1149614 agcataggggtaggtctaaaatcgcctaaaactgctatttctctgtgtttctggagt 1149558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 35163572 - 35163639
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||||||| |||| ||||| |||||    
T  35163572 ctaaaactgtcatttctctgtgtttttggagtt-gaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 32836179 - 32836114
Alignment:
Q  16 gggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtag 82  Q
    |||||| |||||||  ||||||||||| |||||||||| ||||| |||| |||||||||||||||||    
T  32836179 gggtaggtctaaaattgtctaaaactgtcatttctctgtgtttcaggag-ttgaaaataggaggtag 32836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 31573885 - 31573817
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  31573885 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaa 31573817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 32836381 - 32836444
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||||||  |||||||| |||||||| || |||||||||| ||||||||| |||| |||||    
T  32836381 gtctaaaactgttatttctcttcgtttctgaag-ttgaaaatagaaggtaggactaaaactgcaa 32836444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 19359495 - 19359665
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19359495 agcataggggtaggtctaaaaccgcctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataa 19359594  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  19359595 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 19359665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 5819115 - 5818945
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5819115 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataa 5819016  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || || |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  5819015 ttgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 5818945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 8647797 - 8647967
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8647797 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataa 8647896  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  8647897 ttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 8647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 14215425 - 14215257
Alignment:
Q  11 cataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14215425 cataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataact 14215326  T
Q  111 aaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
     ||||||| ||| |||||||||||||| || | ||||||||| ||||||| ||||||||||||| ||||    
T  14215325 gaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggacca 14215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 8461290 - 8461460
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  8461290 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataa 8461389  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| ||||||||||||||  |||| | |||||| ||||||||||||||||||||| ||||    
T  8461390 ttgaaggaccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggacca 8461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 2864940 - 2864778
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2864940 agcataggggtagttctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 2864841  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    || ||||||||||| ||| |||||||||| ||||  | || ||| ||||||||||||||||||    
T  2864840 ttgaaggaccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacac 2864778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 29454926 - 29454764
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29454926 agcatatgggtaggtctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataa 29454827  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    || ||||||||||| |||||||||||||| ||||  |||| ||| ||||||||||||||||||    
T  29454826 ttcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacac 29454764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 18183156 - 18182992
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||||  ||||||| | ||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  18183156 agcataggggtaggcctaaaactgcctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 18183057  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  18183056 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacga 18182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 24331747 - 24331575
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa--tgat 106  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||   |||    
T  24331747 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagat 24331648  T
Q  107 aattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||||  ||||||||||| ||||    
T  24331647 aattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 24331575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 25000448 - 25000609
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25000448 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 25000547  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    || || |||| ||| ||||||||||||||   ||  |||| ||| |||||||||||||||||    
T  25000548 ttgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaaca 25000609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 164376 - 164207
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  164376 agcataggggtaggtctaaaaccgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 164278  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || || |||||||| ||| |||| ||||| ||||| |||||||| ||||||||| ||||||||||| ||||    
T  164277 ttgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacca 164207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 16018946 - 16019116
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  16018946 agcataggggtagatctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataa 16019045  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| ||| |||  |||| ||||||||  |||| |||| ||| ||||||| ||||||||| ||| ||||    
T  16019046 ttgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggacca 16019116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 15709335 - 15709489
Alignment:
Q  16 gggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaagg 115  Q
    |||||| |||||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  15709335 gggtaggtctaaaaccgcctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaagg 15709434  T
Q  116 accgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    ||||||| |||||||||| ||| ||||  || |||||  |||||||||||||||||    
T  15709435 accgttttgttctgtttt-aaagggcatgactagtttcatgagtaggccaaaacac 15709489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 8647600 - 8647454
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  8647600 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 8647502  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  8647501 ttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggacca 8647454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 2865138 - 2865284
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  2865138 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgttctgtt 2865236  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  2865237 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 2865284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 18183352 - 18183498
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  18183352 gtctaaaactgttatttctctgcgtttttggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 18183450  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  18183451 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 18183498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 5819313 - 5819458
Alignment:
Q  33 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttt 132  Q
    |||||||||| ||||||| ||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  5819313 tctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttt 5819411  T
Q  133 taaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  5819412 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 5819458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 15709132 - 15708995
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  15709132 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtt 15709035  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    |||||| |||| ||||||||| ||||||||||||||||||    
T  15709034 ttaaaagggcataaccagtttcgtgagtaggccaaaacac 15708995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 19359298 - 19359152
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||| ||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||    
T  19359298 gtctagaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 19359200  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||| ||| ||||    
T  19359199 ttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggacca 19359152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 24362219 - 24362365
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| || |||||||||||  |||||||    
T  24362219 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttattctgtt 24362317  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||| ||||| ||||    
T  24362318 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggacca 24362365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 29455125 - 29455271
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  29455125 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 29455223  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| |||||||| |||||||||||| ||||    
T  29455224 ttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggacca 29455271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 15372060 - 15371892
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaa----aactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatg 104  Q
    ||||||| ||||| |||||||||| ||||    ||||  ||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  15372060 agcatagaggtaggtctaaaaccgcctaattaaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatg 15371961  T
Q  105 ataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| ||||||| ||| |||||||||||||| ||||| ||||  || |||||||| |||||| |||||    
T  15371960 ataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgag 15371892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 15372256 - 15372402
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| ||||   | ||||| ||| |||| || ||||||||||||||||||||| || ||||||||||| ||||||||    
T  15372256 gtctaaaactgtcatttctctgcgtttttggaaaat-aaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 15372354  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  15372355 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 15372402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 8461092 - 8460952
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| || |||||||| ||||||||    
T  8461092 gtctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 8460994  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||| |||||||| ||||||||||||||| ||||    
T  8460993 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacga 8460952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 24362022 - 24361862
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||  ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||     
T  24362022 agcataggggtaggtctaaaaccgcctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatac 24361924  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    || ||||||| ||| ||||||||||| || ||||  | |||||| ||| |||||||||||||    
T  24361923 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaaca 24361862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 24325397 - 24325237
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||  ||||||||||||||| |||||  | ||||| || ||||||||||||||||| ||||||||||||     
T  24325397 agcataggggtaggtctaaaaccggctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcgacaaaaatgatac 24325299  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    || ||||||| ||| ||||||||||| || ||||  | |||||| ||| |||||||||||||    
T  24325298 ttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaaca 24325237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 14215626 - 14215772
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || | || ||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  14215626 gtctaaaactgtcatttctctacgtttttggagaat-aaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 14215724  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| | |||||| ||||||||| ||||||||||| ||||    
T  14215725 ttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggacca 14215772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 164574 - 164711
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| | ||| |||||  | ||||| || |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  164574 gtctaaaactgtcatttctctacatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 164672  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    |||||| ||||  |||||||| |||||| ||||||||||    
T  164673 ttaaaagggcaagaccagtttagtgagttggccaaaaca 164711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 14463904 - 14464044
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||| ||    
T  14463904 gtctaaaactgtcatttctctgcgtttttggagaat-aaaattgg-ggtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttctatt 14464001  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| | || ||  ||||| |||||||||||||||||||||    
T  14464002 ttaaaaggacaaaattagtttcgtgagtaggccaaaacacgag 14464044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 24332139 - 24332213
Alignment:
Q  182 ctccctgtcttaatcatctttcggaatgaatggtccaaagatctcattatttacaatgaccaaataatcaacaaa 256  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24332139 ctccctatcttaatcatctttcataatgaatggtccaaagatctcattatttacaatgaccaaataatcaacaaa 24332213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 25000251 - 25000112
Alignment:
Q  33 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttt 132  Q
    |||||||||| ||||||||| ||||| |||||  | ||||| || |||||||| |||||||||| ||||||||||||||||||||| |||  ||||||||    
T  25000251 tctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggaccattttattctgttt 25000153  T
Q  133 taaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    ||| | ||||  ||||  || ||||||||||||||||||||    
T  25000152 taacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 14462769 - 14462689
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctg----gagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||||||| ||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14462769 ctaaaactgtcatttctctacgtttctgtctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 14462689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 24331943 - 24332083
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaa-tgcaacaaaa-atgataattaaaggaccgtttcgttctg 129  Q
    ||||||||||| ||||||||||||||| |||||  | | ||| || |||||||||||||| |||||||||| |||||||||  |||||||||| ||||||    
T  24331943 gtctaaaactgtcatttctctgcgtttttggagaat-agaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcaggaccgttttgttctg 24332041  T
Q  130 tttt-aaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    |||| |||||||||| | |||||| ||||||| |||||||||    
T  24332042 ttttaaaaaaggcaggatcagtttcgtgagtatgccaaaaca 24332083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 4219780 - 4219684
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||||||  |||| |||||| | ||| ||||||||||||    
T  4219780 ggtaggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgag 4219684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 10721967 - 10721873
Alignment:
Q  12 ataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||| |||||||| | ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||||    
T  10721967 ataggggtaggtctaaaactgcctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgata 10721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 6019189 - 6019290
Alignment:
Q  69 aaaataggaggtaggacgaaaa-atgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaa 167  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||  |||  | |||||| ||||||| ||||||    
T  6019189 aaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgtgagta-gccaaa 6019287  T
Q  168 aca 170  Q
    |||    
T  6019288 aca 6019290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 4623265 - 4623170
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    ||||||||| ||||||| | ||||||||||||| ||||||  ||| ||||||||||||| |||||| |||| ||| ||||||| | ||||||||||    
T  4623265 ggtaggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacga 4623170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 27307238 - 27307148
Alignment:
Q  16 gggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||| |||||||| | ||||||||| ||||||| ||||||||||||| |||||||||||||||| ||| |||| ||||| ||| ||||||    
T  27307238 gggtaggtctaaaactgcctaaaactgtcatttctatgcgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgata 27307148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 7349436 - 7349546
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||| ||||| ||||||||||||||||| | |||||  |||| ||| ||||||||||  |||| |||| ||| |||||||| ||||||    
T  7349436 aaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaa 7349535  T
Q  169 cacgagaacca 179  Q
    |||||| ||||    
T  7349536 cacgaggacca 7349546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 4222150 - 4222251
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 177  Q
    ||||||||||||||||||| ||||||||||| | || |||  ||| |||||||||||||| ||||  |||| ||| ||||| || |||||||||||| ||    
T  4222150 ggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggac 4222249  T
Q  178 ca 179  Q
    ||    
T  4222250 ca 4222251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 16752955 - 16753089
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa--atgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||| | |||| ||||| ||||  |||||||||  ||||  |||||||||  ||    
T  16752955 ctaaaactgccatttttctgcgtttctggag-ttgaaaataggagttaggtctaaaactgcaaaaaaaacatgataatt-taggatggtttcgttcgatt 16753052  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    | ||| ||||||||||| ||| |||||| || |||||    
T  16753053 tgaaagaggcagaaccattttcgtgagttggtcaaaa 16753089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 6018441 - 6018330
Alignment:
Q  67 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaa 166  Q
    |||||||||  |||||||| |||| ||||||||||||||||||| ||| |   ||| |||||||||||||| | ||  |||||||| ||||||||  |||    
T  6018441 tgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaa 6018343  T
Q  167 aacacgagaacca 179  Q
    |||||||||||||    
T  6018342 aacacgagaacca 6018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 28495029 - 28494891
Alignment:
Q  9 agcatagg-ggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| ||||| ||||||||   |||||| || || |||||||||||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  28495029 agcataggtggtaggtctaaaactacctaaaattgtcacttctctgcgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 28494931  T
Q  108 attaaaggaccgtttcgttctgttttaaaaaggcagaacca 148  Q
     ||  ||||| |||| ||||  ||| ||| |||||||||||    
T  28494930 gtt-taggacagttttgttcgatttgaaagaggcagaacca 28494891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 16018705 - 16018611
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    ||||||||| ||||||||| |||||| |||||| ||||||||||| ||||| |||||||| ||||  | || ||| |||| |||||||||||||||    
T  16018705 ggtaggacggaaaatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacga 16018611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 7348685 - 7348575
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||| |||||||||||||||||   |||||  |||| |||||||||||||| ||||  |||| ||| |||||||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  169 cacgagaacca 179  Q
    || ||| ||||    
T  7348585 catgaggacca 7348575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 41834434 - 41834511
Alignment:
Q  23 tctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 101  Q
    |||||||  ||||||||||| ||||||||||||||||  ||| |||||||||||||||||||| |||| ||||| ||||    
T  41834434 tctaaaattgtctaaaactgtcatttctctgcgtttcaagag-ttgaaaataggaggtaggactaaaactgcaaaaaaa 41834511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 4624644 - 4624749
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||||||||||| ||||||||||| || ||  |||| ||| ||||||||| || ||  |||| ||| |||||||||  ||||    
T  4624644 aaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaaaa 4624743  T
Q  169 cacgag 174  Q
    ||||||    
T  4624744 cacgag 4624749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 28495225 - 28495288
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||  |||||||||||| |||||||| |||||||||||||||||||| |||| |||||    
T  28495225 gtctaaaactatcatttctctgcggttctggag-ttgaaaataggaggtaggactaaaactgcaa 28495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 32305979 - 32305916
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| |||||    
T  32305979 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataagaggtaggactaaaactgcaa 32305916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 27307443 - 27307499
Alignment:
Q  33 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 90  Q
    ||||||| || ||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  27307443 tctaaaaatgtcatttctctgcatttctggag-ttgaaaataggaggtaggactaaaa 27307499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 22651505 - 22651443
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||||||| | ||||||||||||||| ||||||| ||||||||||| |||| |||||    
T  22651505 ctaaaactgccatttttgtgcgtttctggagtt-gaaaataaggaggtaggactaaaactgcaa 22651443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 13814155 - 13814187
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||||||||||| |||||||||||||||||||    
T  13814155 ggtaggacgaaaagtgcaacaaaaatgataatt 13814187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 16752743 - 16752680
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||  ||||||| ||||||| ||||||| |||||||||||||| ||| |||| |||||    
T  16752743 gtctaaaactatcatttctttgcgtttatggagtt-gaaaataggaggtatgacaaaaactgcaa 16752680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 17433574 - 17433744
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17433574 agcataggggtaggtctaaaaccgtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 17433673  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| |||||||||||| |||||||| ||||    
T  17433674 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggacca 17433744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 5540002 - 5539832
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5540002 agcataggggtaggtctaaaaccgcctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataa 5539903  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  5539902 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 5539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 15173453 - 15173622
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  15173453 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 15173552  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  15173553 ttgaaggaccattttgttctgtttt-aaaaggcaggaccagttttgtgagtaggccaaaacacgaggacca 15173622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 33144103 - 33143933
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  33144103 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataa 33144004  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  33144003 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 33143933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 18984478 - 18984640
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| || |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18984478 agcataggggaaggtctaaaaccgcctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 18984577  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    || ||||||||||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||    
T  18984578 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacac 18984640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 21856228 - 21856058
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  21856228 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataa 21856129  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||||  ||||||||||| ||||    
T  21856128 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 21856058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 29869978 - 29870148
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| ||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29869978 agcatatgggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 29870077  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||||||| ||||    
T  29870078 ttgaaggaccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggacca 29870148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 50970464 - 50970294
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50970464 agcataggggtaggtctaaaaccgccaaaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataa 50970365  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||| |||||||  |||| |||||||| ||||||||||||||||||||| ||||    
T  50970364 ttgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 50970294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 29307324 - 29307471
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  29307324 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 29307423  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||| ||||||||||| ||||    
T  29307424 ttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggacca 29307471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 8678727 - 8678557
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||  |||||||||| ||||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8678727 agcataggggtatgtctaaaaccgcctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataa 8678628  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| ||| |||||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  8678627 ttgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 8678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 39154379 - 39154549
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39154379 agcataggggtaggtctaaaaccgcctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 39154478  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| ||| ||||||||||  |||| |||||||| ||||||||||||||||||||| ||||    
T  39154479 ttgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 39154549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 9019345 - 9019492
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  9019345 gtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 9019444  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  9019445 ttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggacca 9019492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 15646379 - 15646208
Alignment:
Q  8 tagcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15646379 tagcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgata 15646280  T
Q  108 attaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||| ||| ||| ||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  15646279 attgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 15646208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 4636330 - 4636500
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||| ||  ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4636330 agcataggggtaggtctaaaatcgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataa 4636429  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||| ||||| |||||||||||||| ||||| | |||||| ||||||||||||||||||||| ||||    
T  4636430 ttgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggacca 4636500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 26859231 - 26859083
Alignment:
Q  23 tctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttt 122  Q
    |||||||||| ||||||||   | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  26859231 tctaaaaccgcctaaaactattacttctctgcgtttctggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttt 26859132  T
Q  123 cgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
     |||||||||||||| ||||| |||||||| || |||||||||||||||    
T  26859131 tgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacac 26859083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 5962762 - 5962594
Alignment:
Q  11 cataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||||||||  | |||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  5962762 cataggggtaagtttaaaaccgcctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagtt 5962663  T
Q  111 aaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
     || |||||||| |||||||||||||| ||| | |||||||| |||| ||| ||| |||||||| ||||    
T  5962662 gaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggacca 5962594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 50970661 - 50970807
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  50970661 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 50970759  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  50970760 ttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 50970807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 5540201 - 5540347
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  5540201 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttcttctgtt 5540299  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| | ||| |||||||| ||||||||||||||||||||| ||||    
T  5540300 ttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggacca 5540347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 15646578 - 15646724
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  15646578 gtctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 15646676  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| || || | |||||| ||||||||||||||||||||| ||||    
T  15646677 ttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggacca 15646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 18984281 - 18984135
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||  ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  18984281 gtctaaaactatcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 18984183  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| |||||||| |||||||||||| ||||    
T  18984182 ttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggacca 18984135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 29307115 - 29306974
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  29307115 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 29307017  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| | ||  |||||||| |||||||||||||||||||||    
T  29307016 ttaaaaggacatgaccagtttcgtgagtaggccaaaacacgag 29306974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 17112467 - 17112359
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17112467 agcataggggtaggtctaaaaccgcctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataa 17112368  T
Q  109 ttaaaggac 117  Q
    || ||||||    
T  17112367 ttgaaggac 17112359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 33144302 - 33144448
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| || |||| || ||| ||||||||    
T  33144302 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtccattttgttctgtt 33144400  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  33144401 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 33144448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 8678925 - 8679070
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| |||||||||||||||||||||||||||||||||||| || |||| ||| ||||||||    
T  8678925 gtctaaaactgtcatttctctgcatttttggagaat-aaaat-ggaggtaggacgaaaaatgcaacaaaaatgataattgaatgacctttttgttctgtt 8679022  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||  ||||||||||||||||||||| ||||    
T  8679023 ttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggacca 8679070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 15173258 - 15173112
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||| ||||||| ||||  ||    
T  15173258 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttcaatt 15173160  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  15173159 ttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggacca 15173112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 21856426 - 21856572
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| ||  ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||    
T  21856426 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggaccgttttgttctgtt 21856524  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||||||||| | ||||||  |||||||||||||||||||| ||||    
T  21856525 ttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggacca 21856572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 29869782 - 29869636
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  29869782 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtt 29869684  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||| ||||||||||||| ||||    
T  29869683 ttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggacca 29869636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 9019122 - 9018989
Alignment:
Q  45 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcaga 144  Q
    |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| || || |||||||| |||||||||||||| ||||||    
T  9019122 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcaga 9019024  T
Q  145 accagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||||| || |||||||||||||||||| ||||    
T  9019023 accagtttcgttagtaggccaaaacacgaggacca 9018989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 5962961 - 5963107
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || ||| |||| ||||| ||    
T  5962961 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgttctatt 5963059  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  | |||||| ||||||||||||||||||||| ||||    
T  5963060 ttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 5963107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 17433378 - 17433232
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| || ||||||||||| ||||||||    
T  17433378 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 17433280  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||    ||||||  |||||||||||||||| ||| ||||    
T  17433279 ttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggacca 17433232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 26859443 - 26859583
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||   |||||||||||||| |||||  |  |||| || ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  26859443 gtctaaaactattatttctctgcgtttttggagaat--aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgttctgtt 26859540  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| ||||| |  ||||| |||||||| ||||||||||||    
T  26859541 ttaaaagggcaggattagtttcgtgagtagcccaaaacacgag 26859583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 39153989 - 39153915
Alignment:
Q  182 ctccctgtcttaatcatctttcggaatgaatggtccaaagatctcattatttacaatgaccaaataatcaacaaa 256  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39153989 ctccctatcttaatcatctttcataatgaatggtccaaagatctcattatttacaatgaccaaataatcaacaaa 39153915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 39154181 - 39154044
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||| ||||||| |||||  | | ||| || |||||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  39154181 gtctaaaactgtcatttctatgcgtttttggagaat-agaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgttctgtt 39154083  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    |||||| ||||  | |||||| ||||||| |||||||||    
T  39154082 ttaaaagggcatgatcagtttcgtgagtatgccaaaaca 39154044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 52268416 - 52268306
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||| ||||||||||||||||| | || ||| |||| |||||||||||||| ||||| |||| ||| ||||| |||||||||    
T  52268416 aaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 52268317  T
Q  169 cacgagaacca 179  Q
     ||||| ||||    
T  52268316 tacgaggacca 52268306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 4636134 - 4636033
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| || ||  | ||||| || ||||| || ||||||||||||||||||||| || ||||||||||| ||||||||    
T  4636134 gtctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttt-gttctgtt 4636037  T
Q  132 ttaa 135  Q
    ||||    
T  4636036 ttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 47827033 - 47827108
Alignment:
Q  95 aacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    |||||||||||||||||||||||  ||| |||||||||||||| ||||  |||| ||| |||||||||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaaca 47827108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 17088312 - 17088243
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||| ||||| |||||    
T  17088312 gtctaaaactgccatttctctgcatttctgaag-ttgaaaataggaggtaggactaaaattgcaaaaaaaa 17088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 52269177 - 52269277
Alignment:
Q  79 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacc 178  Q
    |||||||||||| ||||||||||||||||| | || |||  ||| |||||||||||||| |||||||||  |||  |||||| | ||||||||||| |||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  179 a 179  Q
    |    
T  52269277 a 52269277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 45048533 - 45048594
Alignment:
Q  45 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  45048533 atttctctgcgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 45048594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 17088524 - 17088587
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||||||| || |||| |||||    
T  17088524 gtctaaaactgtcatttctctgcgtttctaga-tttgaaaataggaggtagaactaaaactgcaa 17088587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 44291701 - 44291769
Alignment:
Q  38 aactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    ||||||||||||| || |||||||||||| ||||||||| |||||||| |||| ||||| ||| ||||||    
T  44291701 aactgccatttctatgtgtttctggagtt-gaaaatagggggtaggactaaaactgcaaaaaacatgata 44291769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 45048316 - 45048253
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    |||||||||||  |||||| ||||||||||||| ||||||||| |||||||||| |||| |||||    
T  45048316 gtctaaaactgttatttctatgcgtttctggag-ttgaaaatatgaggtaggactaaaactgcaa 45048253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 2733419 - 2733478
Alignment:
Q  112 aaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    ||||||||||| |||||||||||||| ||||| |||| ||| | || |||||||||||||    
T  2733419 aaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacac 2733478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 44802555 - 44802629
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||| || ||||| |||| |||||||||||| ||||||||||||||| || |||| ||||| ||| ||||||    
T  44802555 gtctaaaattgtcatttttctgtgtttctggagtt-gaaaataggaggtagaactaaaactgcaaaaaacatgata 44802629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 8229800 - 8229732
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  8229800 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaa 8229732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 17641750 - 17641818
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  17641750 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaa 17641818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 39485226 - 39485163
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||| ||| |||||| ||||||| |||| ||||||||||| |||||| |||| |||||    
T  39485226 gtctaaaactgtcatctctctgtgtttctgaagtt-gaaaataggagataggactaaaactgcaa 39485163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 18451016 - 18450846
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  18451016 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataa 18450917  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||| | |||||||| ||||||||||||||||||||| ||||    
T  18450916 ttgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggacca 18450846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 28616973 - 28617143
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28616973 agcataggggtaggtctaaaatcgcctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataa 28617072  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| |||||||||||||| | |||||||||||| ||||||||||||||||||||| ||||    
T  28617073 ttgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggacca 28617143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 43058692 - 43058856
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43058692 agcataggggtaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaac-aaaatgataa 43058790  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || ||||||| ||| ||||||||||||||  |||| |||||||| |||||||||||||||||||||    
T  43058791 ttgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgag 43058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 40815531 - 40815361
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40815531 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 40815432  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| ||||||| ||| |||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  40815431 ttgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 40815361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 40027501 - 40027669
Alignment:
Q  11 cataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    |||| |||||| |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027501 catatgggtaggtctaaaaccgcctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 40027600  T
Q  111 aaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
     || |||||||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  40027601 gaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 40027669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 239711 - 239881
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  239711 agcatagagttaggtctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataa 239810  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||| ||||    
T  239811 ttgaaggaccattttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggacca 239881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 22374684 - 22374854
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||||||| || |||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22374684 agcataggggaaggtctaaaaccgcctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 22374783  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||| ||| ||||||||||||||||||||| ||||    
T  22374784 ttgaaggaccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggacca 22374854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 7446705 - 7446870
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| | |||| |||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446705 agcatatgagtaggtctaaaaccgcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 7446804  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || ||||||||||| |||||||||||||| ||||| |||||||| ||||||| | |||||||||||    
T  7446805 ttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgag 7446870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 11090879 - 11091049
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||||||| |||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  11090879 agcatatgggtaggtctaaaaccgcctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataa 11090978  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  11090979 ttgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11091049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 26538461 - 26538608
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  26538461 gtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 26538560  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||| | ||||| |||||||| ||||||||||||||||||||| ||||    
T  26538561 ttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggacca 26538608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 1978468 - 1978630
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||| ||||||||||  |||||||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  1978468 agcatagaggtaggtctaaaaccgcataaaactgccatttctttgtgtttctagagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataa 1978567  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    || |||||| |||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||    
T  1978568 ttgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacac 1978630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 3025822 - 3025991
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| |||||| |||  |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3025822 agcatatgggtaggtctaaacccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataa 3025921  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||||||| ||| |||||||||| |||||||||| ||| ||||||| ||||||||||||| ||||    
T  3025922 ttgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggacca 3025991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 171
Target Start/End: Complemental strand, 8425533 - 8425379
Alignment:
Q  16 gggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaagg 115  Q
    |||||| ||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |    
T  8425533 gggtaggtctaaaaccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-g 8425435  T
Q  116 accgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    ||||||| ||||||||||||||||| |  |||| ||| ||||||||||||||||||    
T  8425434 accgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacac 8425379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 14432500 - 14432670
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    |||||| |||||| ||||||  || ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  14432500 agcataagggtaggtctaaattcgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataa 14432599  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||| ||| |||  ||||||||||||| ||||  ||||||||  |||||||||||||||||||| ||||    
T  14432600 ttgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggacca 14432670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 11090683 - 11090537
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  11090683 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 11090585  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  11090584 ttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggacca 11090537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 239514 - 239375
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  239514 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 239416  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    || ||||||||| |||||||| ||||||||||||||||||||    
T  239415 tt-aaaaggcaggaccagtttcgtgagtaggccaaaacacga 239375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 40815728 - 40815874
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  40815728 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgttctgtt 40815826  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  40815827 ttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggacca 40815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 43058495 - 43058354
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  43058495 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 43058397  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||||||||| |||||||| |||||| ||||||||||||||    
T  43058396 ttaaaaaggcaggaccagtttagtgagttggccaaaacacgag 43058354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 22374482 - 22374336
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||  ||||||| ||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  22374482 gtctaaaactatcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 22374384  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  22374383 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 22374336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 26538259 - 26538113
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  ||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  26538259 gtctaaaactgttatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctgtt 26538161  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| ||||    
T  26538160 ttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggacca 26538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 40027302 - 40027162
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| |  |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  40027302 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 40027204  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||  |||||||| ||||||||||||||||||||    
T  40027203 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacga 40027162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 1978270 - 1978132
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||| ||||||||||| ||||||||    
T  1978270 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 1978172  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacac 171  Q
    |||||| ||||| |||||||| ||||||||||||||||||    
T  1978171 ttaaaagggcaggaccagtttcgtgagtaggccaaaacac 1978132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 28616776 - 28616629
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||| |||||||||||||| | |  |   ||||| || ||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  28616776 gtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgttctgtt 28616677  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  28616676 ttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 28616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 3025627 - 3025482
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||| ||||||| | |||  | ||||| || |||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  3025627 gtctaaaactgtcatttctttgcgttttttgagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 3025530  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||  |||| |||||||| ||||||||||||||||||||| ||||    
T  3025529 ttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggacca 3025482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 8425743 - 8425889
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| |||||| |||| ||||| ||    
T  8425743 gtctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgttctatt 8425841  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||| ||| |||||||| ||||||||| |||||||    
T  8425842 ttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaacca 8425889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 18451214 - 18451360
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| || ||||||  ||| ||||||||    
T  18451214 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggactattttgttctgtt 18451312  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  18451313 ttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 18451360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 14432304 - 14432158
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||| || ||||||||||| ||| | ||    
T  14432304 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgttatatt 14432206  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  ||||||||  |||||||||||||||||||| ||||    
T  14432205 ttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggacca 14432158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 20444875 - 20444765
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || ||||||||||||| ||||||||||||||||| | ||||||||||| |||||||||||||| ||||| |||||||| |||||| ||||||||    
T  20444875 aaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaa 20444776  T
Q  169 cacgagaacca 179  Q
    |||||| ||||    
T  20444775 cacgaggacca 20444765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 28847122 - 28847224
Alignment:
Q  77 aggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaa 176  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||  |||| |||||||| |||||||| |||||||||||| |    
T  28847122 aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgagga 28847221  T
Q  177 cca 179  Q
    |||    
T  28847222 cca 28847224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 20440461 - 20440560
Alignment:
Q  80 taggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||| ||||||||||||||||| | || |||||||| |||||||||||||| ||||| |||||||| |||||| |||||||||||||| ||||    
T  20440461 taggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacca 20440560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 35781093 - 35781187
Alignment:
Q  80 taggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    ||||||||||||||||||||||||||||||| |||||  |||| |||||||||||||| ||||  |||| ||| |||||||||||||||||||||    
T  35781093 taggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgag 35781187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 174
Target Start/End: Complemental strand, 7446497 - 7446363
Alignment:
Q  38 aactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaa 137  Q
    ||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  7446497 aactgtcatttctctgcgtttttggagaat-aaaatggg-ggtatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaa 7446400  T
Q  138 aggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
     ||||| |||| |||  ||||||| ||||||||||||    
T  7446399 gggcaggaccaatttcatgagtagaccaaaacacgag 7446363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 35779834 - 35779724
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || |||||||| |||||||||||||||||||||||| ||||||  ||| |||||||||||||| ||||| |||| ||| ||||||| | |||||    
T  35779834 aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaa 35779735  T
Q  169 cacgagaacca 179  Q
    |||||| ||||    
T  35779734 cacgaggacca 35779724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 8972363 - 8972253
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    |||||||| ||||| ||||||||||||||||||||||||||| || |||  ||| |||||||||| ||| ||||  |||| ||| ||||| | |||||||    
T  8972363 aaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaa 8972264  T
Q  169 cacgagaacca 179  Q
    |||||| ||||    
T  8972263 cacgaggacca 8972253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 15551612 - 15551515
Alignment:
Q  82 ggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||||||||||||||||||| | ||||||  ||| ||| |||||||||||||||  |||| ||| |||||||  |||||||||||| ||||    
T  15551612 ggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggacca 15551515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 15552482 - 15552573
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    ||||||||||||||| ||||||||||||||||| || |||  ||| |||||||||||||| ||| | | || ||| |||||||||||||||||    
T  15552482 ggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaaca 15552573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 28143414 - 28143477
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||| |||||    
T  28143414 gtctaaaactgtcatttctctgcgtttctggag-ttgaaaataggacgtaggactaaaactgcaa 28143477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 14942228 - 14942297
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 102  Q
    |||||||||||| |||||||||| ||||||||| |||||||||||| ||||||| |||| ||||| |||||    
T  14942228 gtctaaaactgcgatttctctgcatttctggag-ttgaaaataggatgtaggactaaaactgcaaaaaaaa 14942297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 31797166 - 31797225
Alignment:
Q  36 aaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 96  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||| |||||    
T  31797166 aaaactgtcatttctctgcgtttctagag-ttgaaaataggaggtaggactaaaactgcaa 31797225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 44219804 - 44219680
Alignment:
Q  34 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtttt 133  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || |||||| ||||||  ||| ||||  |||     
T  44219804 ctaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacat-ataatttaaggacaattttgttcgattta 44219706  T
Q  134 aaaaaggcagaaccagttttgtgagt 159  Q
    ||||||| || | || ||||||||||    
T  44219705 aaaaaggtaggatcatttttgtgagt 44219680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 2028 - 2196
Alignment:
Q  11 cataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 110  Q
    ||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2028 cataggggtaggtctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2127  T
Q  111 aaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
     || |||||||| |||||||||||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  2128 gaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 1829 - 1683
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||    
T  1829 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacattttgttctgtt 1731  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||| |||||||| ||||||||||||||||| ||| ||||    
T  1730 ttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggacca 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 10989 - 11152
Alignment:
Q  16 gggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaagg 115  Q
    |||||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10989 gggtaggtctaaaaccgcctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg 11088  T
Q  116 accgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||| ||| |||||||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  11089 accgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggacca 11152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 10784 - 10642
Alignment:
Q  31 cgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgt 130  Q
    |||||||||||| ||||||||||| ||| |||||  | ||||| |  |||||||||||||||||||| ||||||||| || ||||||||||| |||||||    
T  10784 cgtctaaaactgtcatttctctgcatttttggagaat-aaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggaccgttttgttctgt 10686  T
Q  131 tttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    ||||||| ||||| ||||||||  ||||||||||||||||||||    
T  10685 tttaaaagggcaggaccagtttcatgagtaggccaaaacacgag 10642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 1123 - 1265
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  1123 gtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgtt 1222  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| ||||| |||||||| ||||||| |||||||||||||    
T  1223 ttaaaagggcaggaccagtttcgtgagtaagccaaaacacgag 1265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 914 - 775
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  914 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccgttttgttctgtt 817  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||| |||||| | ||||||||||||||||||||    
T  816 ttaaaagggcaggaccagtatcgtgagtaggccaaaacacga 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 107; Significance: 1e-53; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 64664 - 64834
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||| ||||| |||||||||| |||||||||  |||| ||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  64664 agcatagaggtaggtctaaaaccgcctaaaactgttatttttctccgtttctggagtttgaaaatagaagataggacgaaaaatgcaacaaaaatgataa 64763  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||||||||||| |||||||||||||| ||| | |||||||| ||||||| ||||||||||||| ||||    
T  64764 ttaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 64464 - 64318
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  64464 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 64366  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| | ||| | |||||| ||||||| | ||||||||||| ||||    
T  64365 ttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggacca 64318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 205752 - 205886
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||| ||||| ||| |||||| || | |||| |||| ||||  ||    
T  205752 gtctaaaactgccatttctctgcgtttttggag-ttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacggttttgttcgatt 205849  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    | ||| |||||| |||| ||| |||||| || |||||    
T  205850 tgaaagaggcaggaccattttcgtgagttggtcaaaa 205886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 205112 - 205038
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  205112 gtctaaaacttccatttctctgtgtttctagagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 205541 - 205468
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 107  Q
    |||||||||||||||||||||| | |||| ||| ||||||||||||||| |||| |||| | ||| ||||||||||    
T  205541 gtctaaaactgccatttctctgtgattctagag-ttgaaaataggaggttggactaaaactacaa-aaaaatgata 205468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 16855 - 17020
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| ||||||| || |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16855 agcataggggtaggtctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 16954  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    || ||||||  ||| |||||||||||||| ||| | | |||||| ||||||| | |||||||||||    
T  16955 ttgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgag 17020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 16658 - 16564
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttc 127  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  16658 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 4389 - 4246
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  4389 agcataggggtaggtctaaaaccgcctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataa 4290  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttt 152  Q
    || ||||||||||| ||| |||||||||| ||||| ||||||||    
T  4289 ttgaaggaccgttttgttttgttttaaaagggcaggaccagttt 4246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 4590 - 4730
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4590 gtctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 4688  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||| ||||| |||||||| ||||||| ||||||||||||    
T  4689 ttaaaagggcaggaccagtttcgtgagtatgccaaaacacga 4730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 42332 - 42187
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| || |||||||| ||||||||    
T  42332 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 42233  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 177  Q
    |||||| ||||| | |||||| |||| ||| |||||||||||||||    
T  42232 ttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaac 42187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 42542 - 42682
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||| |||||||||||||| | ||||||||||| ||||||||    
T  42542 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgaaacaaaaatgataactgaaggaccgttttgttctgtt 42639  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgag 174  Q
    |||||| ||||||| ||||||  ||||||| ||||||||||||    
T  42640 ttaaaagggcagaatcagtttcctgagtagaccaaaacacgag 42682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 4955 - 4809
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  4955 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 4857  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| ||||    
T  4856 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 4809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 5168 - 5320
Alignment:
Q  23 tctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttt 122  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||  |||||||    
T  5168 tctaaaaccgcctaaaactgtcatttttctgcgtttctggagtttgaaaataggagg----acgaaaaatgcaacaaaaatgataattgaattaccgttt 5263  T
Q  123 cgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
      ||||||||||||| | ||  |||||||| |||| |||||||||||||||| ||||    
T  5264 tattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggacca 5320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 134056 - 134202
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||     
T  134056 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgttctgta 134154  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    |||||| ||||  || ||||| ||||||||||||||||||||| ||||    
T  134155 ttaaaagggcatgactagtttcgtgagtaggccaaaacacgaggacca 134202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 10300 - 10401
Alignment:
Q  78 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaac 177  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |  |||||||| |||||||| |||||||||||| ||    
T  10300 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggac 10399  T
Q  178 ca 179  Q
    ||    
T  10400 ca 10401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 10116 - 9948
Alignment:
Q  9 agcataggggtagatctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataa 108  Q
    ||||||||||||  | |||||||| |||||| || ||||||||| ||||||| ||||||||||||||||||||||| | |||||| ||||||| ||||||    
T  10116 agcataggggtatgtttaaaaccgcctaaaattgtcatttctct-cgtttcttgagtttgaaaataggaggtaggatg-aaaatgtaacaaaattgataa 10019  T
Q  109 ttaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    || ||||||| ||| ||||| | |||||| ||||  | |||||| |||| ||||| |||||||||| ||||    
T  10018 ttgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggacca 9948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 18996 - 18860
Alignment:
Q  32 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgtt 131  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||| ||| ||||||| ||| ||||    
T  18996 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggg-ggtaggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgtt 18899  T
Q  132 ttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    |||||| ||||  |||||||| |||||||||||||||||    
T  18898 ttaaaagggcaagaccagtttcgtgagtaggccaaaaca 18860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 19069 - 19150
Alignment:
Q  98 aaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacgagaacca 179  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggacca 19150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 28674 - 28766
Alignment:
Q  81 aggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||||||| ||||||||||||||||||| || |||||||| |||||||||||||| ||||  |||||||| || |||||||||||||||||    
T  28674 aggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacga 28766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 692 - 588
Alignment:
Q  70 aaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaac 169  Q
    |||| ||||||  |||||||||| ||||||||||||||||| |||||| |||| |||||||||||||| ||||  | || ||| ||||||||||||||||    
T  692 aaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaac 593  T
Q  170 acgag 174  Q
    |||||    
T  592 acgag 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 7707 - 7775
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaa 137  Q
    |||||||| ||||||||||||||||||||||||||||||| | || ||| |||| ||||||||||||||    
T  7707 aaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaa 7775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 565 - 471
Alignment:
Q  79 gtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaacacga 173  Q
    |||||||||||||||||||||||||||||||| ||||||  ||  ||| ||||||||||   ||  |||| ||| ||||||||||||||||||||    
T  565 gtaggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacga 471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 8451 - 8529
Alignment:
Q  92 tgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaaca 170  Q
    ||||||||||||||||||| ||||||||||| | | |||||||||| || || |||||||| || ||||| ||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaaca 8529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 61877 - 61982
Alignment:
Q  69 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttcgttctgttttaaaaaggcagaaccagttttgtgagtaggccaaaa 168  Q
    ||||| || |||||||||||||||  ||||||||||||| || || ||   ||| ||||| |||||||| || || |||| ||| |||||||| ||||||    
T  61877 aaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaa 61976  T
Q  169 cacgag 174  Q
    ||||||    
T  61977 cacgag 61982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University