View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12952_high_20 (Length: 437)

Name: NF12952_high_20
Description: NF12952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12952_high_20
NF12952_high_20
[»] chr8 (3 HSPs)
chr8 (1-420)||(29272246-29272665)
chr8 (354-420)||(35984654-35984720)
chr8 (355-420)||(31906409-31906474)
[»] chr6 (74 HSPs)
chr6 (1-420)||(27609528-27609947)
chr6 (12-420)||(27716918-27717326)
chr6 (1-420)||(27696997-27697413)
chr6 (31-420)||(31285914-31286300)
chr6 (4-420)||(27704674-27705081)
chr6 (36-420)||(26647834-26648209)
chr6 (36-420)||(26753802-26754177)
chr6 (28-420)||(26624626-26625009)
chr6 (28-420)||(26730603-26730986)
chr6 (1-216)||(27680521-27680736)
chr6 (30-421)||(27529741-27530132)
chr6 (5-209)||(27603106-27603311)
chr6 (4-216)||(27591426-27591638)
chr6 (4-216)||(28787812-28788024)
chr6 (4-216)||(28793933-28794145)
chr6 (20-216)||(27676041-27676237)
chr6 (26-420)||(26862935-26863320)
chr6 (167-420)||(26144223-26144473)
chr6 (251-420)||(26803801-26803970)
chr6 (167-420)||(26057277-26057527)
chr6 (167-420)||(26077247-26077497)
chr6 (254-417)||(27603365-27603528)
chr6 (167-420)||(25512246-25512496)
chr6 (253-420)||(28787593-28787760)
chr6 (253-420)||(28793714-28793881)
chr6 (28-421)||(27426049-27426440)
chr6 (167-420)||(25484414-25484664)
chr6 (167-420)||(25581077-25581327)
chr6 (4-215)||(26804018-26804229)
chr6 (253-420)||(26885422-26885589)
chr6 (166-420)||(27215807-27216058)
chr6 (253-420)||(27680305-27680472)
chr6 (77-216)||(26813108-26813247)
chr6 (106-216)||(26885641-26885751)
chr6 (71-216)||(25491785-25491930)
chr6 (249-420)||(26825174-26825345)
chr6 (151-216)||(26850283-26850348)
chr6 (137-216)||(25075438-25075517)
chr6 (106-216)||(26657533-26657643)
chr6 (106-216)||(26763504-26763614)
chr6 (57-216)||(27663671-27663826)
chr6 (248-420)||(26657317-26657489)
chr6 (248-420)||(26763288-26763460)
chr6 (56-216)||(26951302-26951458)
chr6 (137-216)||(26978939-26979018)
chr6 (106-216)||(2186376-2186486)
chr6 (250-420)||(25491976-25492146)
chr6 (106-216)||(26637199-26637309)
chr6 (106-216)||(26743165-26743275)
chr6 (338-420)||(27663959-27664041)
chr6 (167-216)||(25546539-25546588)
chr6 (71-216)||(26960684-26960825)
chr6 (299-405)||(27591727-27591833)
chr6 (299-405)||(27676326-27676432)
chr6 (57-226)||(26825374-26825543)
chr6 (344-420)||(29827341-29827417)
chr6 (152-226)||(28141087-28141161)
chr6 (299-420)||(28296446-28296567)
chr6 (299-420)||(28326833-28326954)
chr6 (299-420)||(28504469-28504590)
chr6 (299-420)||(28515506-28515627)
chr6 (151-216)||(29827548-29827613)
chr6 (148-216)||(26938582-26938650)
chr6 (152-216)||(28150734-28150798)
chr6 (151-215)||(29842547-29842611)
chr6 (344-420)||(29842743-29842819)
chr6 (250-420)||(26938384-26938554)
chr6 (342-420)||(28244150-28244228)
chr6 (288-421)||(25075221-25075354)
chr6 (355-420)||(26978735-26978800)
chr6 (350-409)||(28240719-28240778)
chr6 (166-216)||(28097022-28097072)
chr6 (355-420)||(26960480-26960545)
chr6 (344-408)||(28097194-28097258)
[»] scaffold0349 (1 HSPs)
scaffold0349 (12-420)||(1957-2366)
[»] chr1 (7 HSPs)
chr1 (4-420)||(266760-267167)
chr1 (86-420)||(26137243-26137571)
chr1 (26-416)||(28126119-28126498)
chr1 (248-416)||(28132156-28132324)
chr1 (342-403)||(5922218-5922279)
chr1 (89-216)||(5921971-5922098)
chr1 (114-216)||(28132016-28132118)
[»] scaffold1870 (2 HSPs)
scaffold1870 (4-216)||(340-552)
scaffold1870 (253-420)||(124-291)
[»] scaffold0419 (2 HSPs)
scaffold0419 (20-216)||(9058-9254)
scaffold0419 (253-420)||(8842-9009)
[»] scaffold0277 (4 HSPs)
scaffold0277 (4-215)||(3114-3325)
scaffold0277 (4-215)||(12077-12288)
scaffold0277 (253-420)||(3372-3539)
scaffold0277 (253-420)||(12335-12502)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-421)||(60923-61314)
[»] chr4 (12 HSPs)
chr4 (28-421)||(18075115-18075506)
chr4 (340-420)||(18654220-18654300)
chr4 (340-420)||(18688369-18688449)
chr4 (340-420)||(18698143-18698223)
chr4 (340-420)||(18730247-18730327)
chr4 (340-420)||(18678303-18678383)
chr4 (340-420)||(18722828-18722908)
chr4 (153-216)||(18654042-18654105)
chr4 (153-216)||(18678122-18678185)
chr4 (153-216)||(18688179-18688242)
chr4 (153-216)||(18697965-18698028)
chr4 (153-216)||(18730060-18730123)
[»] chr2 (2 HSPs)
chr2 (148-215)||(17991755-17991822)
chr2 (344-420)||(3281014-3281090)
[»] chr5 (1 HSPs)
chr5 (342-421)||(16692221-16692300)
[»] scaffold0038 (2 HSPs)
scaffold0038 (342-420)||(44312-44390)
scaffold0038 (350-409)||(40881-40940)


Alignment Details
Target: chr8 (Bit Score: 384; Significance: 0; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 1 - 420
Target Start/End: Original strand, 29272246 - 29272665
Alignment:
Q  1 atgctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29272246 atgctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttt 29272345  T
Q  101 tctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcct 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  29272346 tctcttaaaacacgaactagatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtccc 29272445  T
Q  201 ctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggcc 300  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29272446 ctatcaaatcatgcaacattacataatggccatattcccaatattggtctatgagagatttttcagccaatactcctagatgatgtgttatgcaatggcc 29272545  T
Q  301 ataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagca 400  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29272546 ataatgagaatgaagtatatatttggcatcttcccattcacaacctttgaagcaacaagcaatgtccagaaagacactttgttgctcttcttccaaagca 29272645  T
Q  401 tcataacttactttaagtat 420  Q
    ||||||||||||||||||||    
T  29272646 tcataacttactttaagtat 29272665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 35984720 - 35984654
Alignment:
Q  354 aacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| ||||| ||||||||||  ||||| || ||||||||| ||||||||||||||||    
T  35984720 aacaagcaatgtcaagaaaaacactttgctcatcttcctctaaagcatcaaaacttactttaagtat 35984654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 31906474 - 31906409
Alignment:
Q  355 acaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    |||||| ||||| ||||| ||||||| ||  ||||| |||||||||||| |||||||||| |||||    
T  31906474 acaagccatgtcaagaaaaacacttttctcatcttcctccaaagcatcaaaacttactttgagtat 31906409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 352; Significance: 0; HSPs: 74)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 1 - 420
Target Start/End: Original strand, 27609528 - 27609947
Alignment:
Q  1 atgctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttt 100  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27609528 atgctagtatcagatgatcatatttagtgcaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttt 27609627  T
Q  101 tctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcct 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27609628 tctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcct 27609727  T
Q  201 ctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggcc 300  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27609728 ctatcaagtcatgtaacatcacataatcgcgatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatggaatggcc 27609827  T
Q  301 ataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagca 400  Q
    |||||||||||||||| |||| || ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  27609828 ataatgagaatgaagtgtatactttgcatcttcccaattatatcctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttccaaagaa 27609927  T
Q  401 tcataacttactttaagtat 420  Q
    ||||| || |||||||||||    
T  27609928 tcatagctcactttaagtat 27609947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 12 - 420
Target Start/End: Original strand, 27716918 - 27717326
Alignment:
Q  12 agatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaac 111  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27716918 agatgatcatatttagttcaaaaagagcaaagttgtattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttttctcttaaaac 27717017  T
Q  112 acgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtca 211  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27717018 acgaactatatcatcctgacagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtca 27717117  T
Q  212 tgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaat 311  Q
    |||||||||||||||| | |||||||||   |||  | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27717118 tgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaaccaacactcctagatgatgtgttatgcaatggccataatgagaat 27717217  T
Q  312 gaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttac 411  Q
     |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  27717218 taagtatatatttggcatcttcccatttacatcttttgaagcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataacttac 27717317  T
Q  412 tttaagtat 420  Q
    |||||||||    
T  27717318 tttaagtat 27717326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 420
Target Start/End: Original strand, 27696997 - 27697413
Alignment:
Q  1 atgctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttt 100  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27696997 atgctagtatcagatgatcatatttagtgcaaatagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttt 27697096  T
Q  101 tctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcct 200  Q
    ||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27697097 tctcttaaaacccgagttatatcatcctgacagcataacctacttctttctccaggctctttagttgattcttgtcggacgacttctttacccatgtcct 27697196  T
Q  201 ctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggcc 300  Q
    ||||||||||||||||  ||||| ||   |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  27697197 ctatcaagtcatgtaatgtcacacaa---ccatattccctatattggtttatgagagatttttcagccaacactgctagatgatgtgttatggaatggcc 27697293  T
Q  301 ataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagca 400  Q
    |||||||| |||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27697294 ataatgagcatgaagcatatatttggcatcttcccatccatgtcctttgaagcaacaagcaatgtccagaaagacactttgctcctcttcttccaaagca 27697393  T
Q  401 tcataacttactttaagtat 420  Q
    ||||| || ||| |||||||    
T  27697394 tcatagctcactctaagtat 27697413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 31 - 420
Target Start/End: Complemental strand, 31286300 - 31285914
Alignment:
Q  31 aaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctgg 130  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||  ||||| || ||||||||||||| ||     
T  31286300 aaaaagagcaaagtcgttttaaaactaaataacaaattgaacatagatatcaatcttactcacagtgttttcatttaaagcatgaactatatcatcttga 31286201  T
Q  131 cagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggc 230  Q
    || |||| ||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||        
T  31286200 caccatagcctacttctttctcctggctctttaggtgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatcccacacaaccat 31286101  T
Q  231 catattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatc 330  Q
    |||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||    
T  31286100 catattcccaac---ggtctatgagagatttttcagccaacacttctagatgatgtgttatgcaatggccataatgagcatggagtatatctttgacatc 31286004  T
Q  331 ttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
      ||||| | |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  31286003 cgcccatccgcatcctttgaagcaacaagcaatgtccagaaagacactctgctcctcttcttccaaagcatcatagcttactttaagtat 31285914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 4 - 420
Target Start/End: Original strand, 27704674 - 27705081
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27704674 ctagtatgagatggtcatatttagtccaaaaagagcaaagtcatattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttttct 27704773  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     |||| |||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27704774 tttaagacattaactatatcatcatggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatatcctcta 27704873  T
Q  204 tcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccata 303  Q
    |||||| ||||||  ||||||||   | ||      ||| |  ||||||||| || |||||||||||||||| ||||||||||||||| |||||| ||||    
T  27704874 tcaagttatgtaatgtcacataa---caat------aatttgtgtctatgagtgacttttcagccaacactcgtagatgatgtgttatacaatggtcata 27704964  T
Q  304 atgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatca 403  Q
    ||||||||||||||||| ||   | |||  | ||  | | ||||| ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  27704965 atgagaatgaagtatattttcaacctctgtcaatctatacccttttaagcaacaagcaatgtcaagaaagacactctgctcctcttcttccaaagcatca 27705064  T
Q  404 taacttactttaagtat 420  Q
    || || ||| |||||||    
T  27705065 tagctcactctaagtat 27705081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 36 - 420
Target Start/End: Complemental strand, 26648209 - 26647834
Alignment:
Q  36 gagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagca 135  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |||||||| ||||||| ||||| || || ||    
T  26648209 gagcaaagtcgtattaaaactaaataacaaattgatcatagatattaatcttactcacagtgttttcttttaaaacatgaactatttcatcttgacacca 26648110  T
Q  136 taacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatat 235  Q
    ||||||||||  ||||||||||||||||  ||||||||||||||| ||||| ||||||||||||| |||||||||||||||  ||| ||||   ||||      
T  26648109 taacctactttgttctccaggctctttacgtgattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaatctcagataa---ccat-- 26648015  T
Q  236 tcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttccc 335  Q
         || |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| ||     || ||||    
T  26648014 ----gattttggtaaatgagagatttttcagccaacactccaagatgatgtgttatgcaatggccataatgataacgaagtatatcttcaaactcctccc 26647919  T
Q  336 attcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  26647918 atctacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtat 26647834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 36 - 420
Target Start/End: Complemental strand, 26754177 - 26753802
Alignment:
Q  36 gagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagca 135  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| |||||||| ||||||| ||||| || || ||    
T  26754177 gagcaaagtcgtattaaaactaaataacaaattgatcatagatattaatcttactcacagtgttttcttttaaaacatgaactatttcatcttgacacca 26754078  T
Q  136 taacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatat 235  Q
    ||||||||||  ||||||||||||||||  ||||||||||||||| ||||| ||||||||||||| |||||||||||||||  ||| ||||   ||||      
T  26754077 taacctactttgttctccaggctctttacgtgattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaatctcagataa---ccat-- 26753983  T
Q  236 tcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttccc 335  Q
         || |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| ||     || ||||    
T  26753982 ----gattttggtaaatgagagatttttcagccaacactccaagatgatgtgttatgcaatggccataatgataacgaagtatatcttcaaactcctccc 26753887  T
Q  336 attcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  26753886 atctacatcctttgaagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtat 26753802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 28 - 420
Target Start/End: Complemental strand, 26625009 - 26624626
Alignment:
Q  28 tccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcc 127  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||| |||||||| ||| |||||||||     
T  26625009 tccaaaaagagcaaagtagtattaaaactaaataataaattgatcatagatatcaatcttactcacactgttttcttttaaaacatgaaatatatcatct 26624910  T
Q  128 tggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataat 227  Q
    || || ||||| ||||||| ||||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||  ||| || |     
T  26624909 tgacaccataatctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctatcaagtcatgtaaggtcatatca- 26624811  T
Q  228 ggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggc 327  Q
      ||||      || |||| | ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| | |||| |||| || |      
T  26624810 --ccat------aagattgatatatgagacatttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagcatatcttcgaa 26624719  T
Q  328 atcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||   |||| ||||||||||  ||||||||||||| || ||||||||||| |||| ||||||||||||||||||||| || |||||||||||    
T  26624718 ctccctccatccacatcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtat 26624626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 28 - 420
Target Start/End: Complemental strand, 26730986 - 26730603
Alignment:
Q  28 tccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcc 127  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||| |||||||| ||| |||||||||     
T  26730986 tccaaaaagagcaaagtagtattaaaactaaataataaattgatcatagatatcaatcttactcacactgttttcttttaaaacatgaaatatatcatct 26730887  T
Q  128 tggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataat 227  Q
    || || ||||| ||||||| ||||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||  ||| || |     
T  26730886 tgacaccataatctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctatcaagtcatgtaaggtcatatca- 26730788  T
Q  228 ggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggc 327  Q
      ||||      || |||| | ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| | |||| |||| || |      
T  26730787 --ccat------aagattgatatatgagacatttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagcatatcttcgaa 26730696  T
Q  328 atcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||   |||| ||||||||||  ||||||||||||| || ||||||||||| |||| ||||||||||||||||||||| || |||||||||||    
T  26730695 ctccctccatccacatcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtat 26730603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 27680736 - 27680521
Alignment:
Q  1 atgctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttt 100  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  27680736 atgctagtatcagatgatcatatttagtgcaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatcaatcatactcacagtgttt 27680637  T
Q  101 tctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcct 200  Q
    ||| |||||||| ||| |||||| || || |  ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  27680636 tcttttaaaacatgaattatatcttcttgacgccataacctacttcgttctccaggctctttaggtgattcttgtcggacgacttctttacccatgtcct 27680537  T
Q  201 ctatcaagtcatgtaa 216  Q
     |||||||||||||||    
T  27680536 ttatcaagtcatgtaa 27680521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 30 - 421
Target Start/End: Original strand, 27529741 - 27530132
Alignment:
Q  30 caaaaagagcaaagtcgtattaaaa-ctaaat--aacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatc 126  Q
    |||||||||||| ||| | |||||| ||||||  |||||| || || || ||||||||||||||||||||||||| | |||||||| |||||||||||      
T  27529741 caaaaagagcaatgtcatgttaaaagctaaatttaacaaattgttcctagatatcaatcttactcacagtgtttttttttaaaacatgaactatatcacg 27529840  T
Q  127 ctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 226  Q
    ||   | || |||||||| | |||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  27529841 ctcaaaccacaacctactgcgttctccaggctcatcgggtgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatgtcacataa 27529940  T
Q  227 tggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttgg 326  Q
        |||||| | |||   |||| |||||||||||||||||||| ||| | | |||||||  ||||||||| |||||||||| ||||||||| | ||||     
T  27529941 ctatcatatttcaaat---ggtccatgagagatttttcagccaaaactgcaacatgatgtactatgcaatgaccataatgagcatgaagtatttctttga 27530037  T
Q  327 catcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtatt 421  Q
    | |||  ||||| ||| ||||||||||||||||||||||| ||||||||||||||||  ||||  ||||||| |||||| || ||||||||||||    
T  27530038 cctctggccatttacaccctttgaagcaacaagcaatgtctagaaagacactttgctcttctttctccaaagaatcatagctcactttaagtatt 27530132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 27603106 - 27603311
Alignment:
Q  5 tagtatcagatgataatatttagtccaaaaagagcaaa-gtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    |||||| ||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  27603106 tagtatgagatgatcatatttagtccaaaaagaccaaaagtcatattaaaactaaataacaaattgatattatatatcaatcttactcacagtgttttct 27603205  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     ||| |||| |||||||||| || || || ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  27603206 gttagaacatgaactatatcgtcttgacaccataacctacttctttctccaggctctttaggtgattcttgtcggacgacttctttacccatgtcctcta 27603305  T
Q  204 tcaagt 209  Q
    ||||||    
T  27603306 tcaagt 27603311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 27591426 - 27591638
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||| |||||||||||||    
T  27591426 ctagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttct 27591525  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     |||||||| ||||||||||||| ||  | |||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  27591526 tttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtgattcttgtcggacgacttctttacccatgacctcta 27591625  T
Q  204 tcaagtcatgtaa 216  Q
    |||| ||||||||    
T  27591626 tcaattcatgtaa 27591638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 28788024 - 28787812
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||| |||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||||    
T  28788024 ctagtatgagatggtcatatttagtccaaaaagagcaaagtcgtatcaaaattaaataacaaattgaacataaatatcaatcatactcacggtgttttct 28787925  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     ||||||||  |||||||||||| || || ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  28787924 tttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttcta 28787825  T
Q  204 tcaagtcatgtaa 216  Q
    |||||||||||||    
T  28787824 tcaagtcatgtaa 28787812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 28794145 - 28793933
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||| |||| ||||||||||| ||| |||| ||||||||| ||||||| |||||||||    
T  28794145 ctagtatgagatggtcatatttagtccaaaaagagcaaagtcgtatcaaaattaaataacaaattgaacataaatatcaatcatactcacggtgttttct 28794046  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     ||||||||  |||||||||||| || || ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  28794045 tttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttcta 28793946  T
Q  204 tcaagtcatgtaa 216  Q
    |||||||||||||    
T  28793945 tcaagtcatgtaa 28793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 27676041 - 27676237
Alignment:
Q  20 atatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaacta 119  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  27676041 atatttagtccaaaatgagcaaaattgtattaaaactaaataacaaattgaacatagatatcaatcttactcacagtgttttctgttaaaacatgaacta 27676140  T
Q  120 tatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||| ||  | |||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  27676141 tatcatcttgagaccataacctgcttctttctccaggctctttaggtgattcttgtcggaccacttctttacccatgacctctatcaattcatgtaa 27676237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 26 - 420
Target Start/End: Complemental strand, 26863320 - 26862935
Alignment:
Q  26 agtccaaaaagagcaaagtcgtattaaa-actaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatca 124  Q
    |||| |||| ||||||||| || ||||| ||||| ||||| | || ||||| |||||||||||||||||||||||||||  ||||||  | | |||||||    
T  26863320 agtctaaaacgagcaaagttgtgttaaagactaa-taacagattgttcataaatatcaatcttactcacagtgttttcttctaaaacgtggattatatca 26863222  T
Q  125 tcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacat 224  Q
    || || || ||||||||||||| ||| || |||||||||   |||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||     
T  26863221 tcatgacaccataacctacttcgttcacccggctctttaggagattcttgtcggacgatttctttgcccatgtcctctatcaagtcatgtaatctcacac 26863122  T
Q  225 aatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatattt 324  Q
     | | ||         |||||||| ||||||||||||||||||||||||||| | ||||||| |||||||  ||||||||||| | | |||||||| ||     
T  26863121 taagacc---------atattggtatatgagagatttttcagccaacactccaacatgatgttttatgcatcggccataatgatatttaagtatatcttc 26863031  T
Q  325 ggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    |   |||  |||   ||  |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26863030 gaattctatccagctaccccctttgaaacaacaagcaatatctagaaagacactttgctgctcttcttccaaagcatcatagcttactttaagtat 26862935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 167 - 420
Target Start/End: Complemental strand, 26144473 - 26144223
Alignment:
Q  167 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 266  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||  | |||||||||||   ||| ||||||||||||||||||    
T  26144473 gattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaa---tggcctatgagagatttttcag 26144377  T
Q  267 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 366  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||||||| |||||||||||||||||||||||    
T  26144376 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaacctttgtccattcacaccctttgaagcaacaagcaatgtc 26144277  T
Q  367 cagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||||||||||| || | || ||| | |||||||||||| ||||||| ||||||    
T  26144276 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 26144223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 251 - 420
Target Start/End: Complemental strand, 26803970 - 26803801
Alignment:
Q  251 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttga 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||     || |||||| ||||||||||||    
T  26803970 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgaacatgaagtatatcttcaaactcctcccatccacatcctttga 26803871  T
Q  351 agcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  26803870 agcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtat 26803801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 167 - 420
Target Start/End: Complemental strand, 26057527 - 26057277
Alignment:
Q  167 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  | |||||||||||   ||| ||||||||||||||||||    
T  26057527 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaa---tggcctatgagagatttttcag 26057431  T
Q  267 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 366  Q
    |||||||||| | |||||||  ||||  |||||||||||||| ||||||||| | |||  | | |  ||||| ||| |||||||||||||||||||||||    
T  26057430 ccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtc 26057331  T
Q  367 cagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||||||||||| || | || ||| | |||||||||||| ||||||| ||||||    
T  26057330 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 26057277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 167 - 420
Target Start/End: Complemental strand, 26077497 - 26077247
Alignment:
Q  167 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  | |||||||||||   ||| ||||||||||||||||||    
T  26077497 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaa---tggcctatgagagatttttcag 26077401  T
Q  267 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 366  Q
    |||||||||| | |||||||  ||||  |||||||||||||| ||||||||| | |||  | | |  ||||| ||| |||||||||||||||||||||||    
T  26077400 ccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtc 26077301  T
Q  367 cagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||||||||||| || | || ||| | |||||||||||| ||||||| ||||||    
T  26077300 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 26077247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 254 - 417
Target Start/End: Original strand, 27603365 - 27603528
Alignment:
Q  254 agagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||   |  ||||| || |||||||||||||||    
T  27603365 agagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaccacttccaatccacatcctttgaagc 27603464  T
Q  354 aacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaag 417  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  27603465 aacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaag 27603528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 167 - 420
Target Start/End: Complemental strand, 25512496 - 25512246
Alignment:
Q  167 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 266  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||  | ||||||||||||   || ||||||||||||||||||    
T  25512496 gattcttgtcggacggtttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaat---ggcctatgagagatttttcag 25512400  T
Q  267 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 366  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||| | | ||||||||| |||||||||||||    
T  25512399 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttacttttgtccatttataccctttgaagtaacaagcaatgtc 25512300  T
Q  367 cagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||||||||||| || | || ||| | |||||||||||| ||||||| ||||||    
T  25512299 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 25512246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 420
Target Start/End: Complemental strand, 28787760 - 28787593
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||     || ||||| |||||||||||||||    
T  28787760 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaag 28787661  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||| |||||||| ||||| |||||||| |||||||| |||||||||||||| ||||||||||||||    
T  28787660 caacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtat 28787593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 420
Target Start/End: Complemental strand, 28793881 - 28793714
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||     || ||||| |||||||||||||||    
T  28793881 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaag 28793782  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||| |||||||| ||||| |||||||| |||||||| |||||||||||||| ||||||||||||||    
T  28793781 caacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtat 28793714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 28 - 421
Target Start/End: Original strand, 27426049 - 27426440
Alignment:
Q  28 tccaaaaagagcaaagtcgtattaaaa-ctaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatc 126  Q
    |||||||||||||||||| | |||||| |||||||||||| || || |  |||||||||||||||||||||||||||  || |||   || |||||| |     
T  27426049 tccaaaaagagcaaagtcatgttaaaagctaaataacaaattgttcctgcatatcaatcttactcacagtgttttcttctagaacttcaaatatatcctt 27426148  T
Q  127 ctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 226  Q
     |   | |||||||| ||||||| |||||||||   |  ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||   ||||| |    
T  27426149 ttcaaaccataacctgcttctttttccaggctcaaaaggtgattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatga 27426248  T
Q  227 tggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttgg 326  Q
        | |||||  |||   |||| |||||| |||||||| | | |||| | | ||||||  |||||||||| |||||||||| ||||||||| | ||||     
T  27426249 ctatcgtattcaaaat---ggtcaatgagacatttttcaactagcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttga 27426345  T
Q  327 catcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtatt 421  Q
    | | |||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||| || ||||||||||||    
T  27426346 ccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaagaatcatagctcactttaagtatt 27426440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 167 - 420
Target Start/End: Complemental strand, 25484664 - 25484414
Alignment:
Q  167 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 266  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||  | ||||||||||||   |  |||||||| |||||||||    
T  25484664 gattcttgtcgaacgacttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaat---gacctatgagacatttttcag 25484568  T
Q  267 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 366  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||| | | ||||||||| |||||||||||||    
T  25484567 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttacttttgtccatttataccctttgaagtaacaagcaatgtc 25484468  T
Q  367 cagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||||||||||| || | || ||| | |||||||||||| ||||||| ||||||    
T  25484467 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 25484414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 167 - 420
Target Start/End: Complemental strand, 25581327 - 25581077
Alignment:
Q  167 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcag 266  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  |||  | |  | ||||||||||||   || ||||||||||||||||||    
T  25581327 gattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcatctgagtgtcatattcccaat---ggcctatgagagatttttcag 25581231  T
Q  267 ccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtc 366  Q
    |||||||||| | |||||||  |||||||||||||||||||| ||||||||| | |||  | | |  ||||| ||| |||||||||||||||||||||||    
T  25581230 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtc 25581131  T
Q  367 cagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
     ||||||||||| | || || |  ||||||||||||||| || |||| ||||||    
T  25581130 tagaaagacactcttctcctttggttccaaagcatcatagctaacttgaagtat 25581077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 26804229 - 26804018
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||| |||||| ||||  ||||||||||||  ||||||||||||||| ||| |||| |||||||||||||||||| ||||||||    
T  26804229 ctagtatgagatggtcatatgtagtcctaaaaatgcaaagtcgtatctaaactaaataacaaattgaacataaatatcaatcttactcacaatgttttct 26804130  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     ||| |||| |||||||||| || || |  ||||||||||||| || | |||| ||||||  ||||||||||||||||||||||||||||||||||| ||    
T  26804129 tttataacatgaactatatcttcatgacgccataacctacttcgtttttcaggatctttaggtgattcttgtcggacgacttctttacccatgtccttta 26804030  T
Q  204 tcaagtcatgta 215  Q
    ||||||||||||    
T  26804029 tcaagtcatgta 26804018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 253 - 420
Target Start/End: Complemental strand, 26885589 - 26885422
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    ||||||||||||  |||||||||| | ||||||| ||||||||||||||||||||| ||||||||||| || | | |||  ||||| ||| |||||||||    
T  26885589 gagagatttttcgaccaacactccaacatgatgttttatgcaatggccataatgagcatgaagtatatcttcgacctctgtccatttacaccctttgaag 26885490  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    |||||||| || ||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  26885489 caacaagctatatccagaaagacactttgctcctcttcctctaaagcatcatagcttactttaagtat 26885422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 166 - 420
Target Start/End: Complemental strand, 27216058 - 27215807
Alignment:
Q  166 tgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttca 265  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||||||  ||| ||||    ||| |||||  |   |||  ||||||||||||||     
T  27216058 tgattcttgtcggacaacttctctacccatatcctctatcaagtcatgtaatctcatataactatcattttcccggt---ggttaatgagagatttttcg 27215962  T
Q  266 gccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgt 365  Q
    ||||||||| | | ||||||| ||||||||||||||||||| | ||||||||||| |||| | | |  ||||| ||| ||||||||||||||||||||||    
T  27215961 gccaacacttcaacatgatgttttatgcaatggccataatgggcatgaagtatatctttgacctttgtccatttacaccctttgaagcaacaagcaatgt 27215862  T
Q  366 ccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    | ||||||||||| | || || ||| |||| ||||||||| || |||||||||||    
T  27215861 ctagaaagacactcttctccttttcctccagagcatcatagctgactttaagtat 27215807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 253 - 420
Target Start/End: Complemental strand, 27680472 - 27680305
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||| || |   || | ||||| | |||||||||||    
T  27680472 gagagattttccagccaacactcctagatgatgtgttatgcaatggtcataatgagcacaaagtatatcttcgaactccttccattgatatcctttgaag 27680373  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    || ||||| ||||| ||||||||||| |||| ||||||||||||||||||||| || || ||||||||    
T  27680372 cagcaagcgatgtcaagaaagacactctgctcctcttcttccaaagcatcatagctcaccttaagtat 27680305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 77 - 216
Target Start/End: Complemental strand, 26813247 - 26813108
Alignment:
Q  77 atatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtc 176  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||| || || |||| |||||||| |||||| || |||| |  ||||||||||     
T  26813247 atatcaatcttactcacaatgttttcttttaaaacatgaactatatcatcttgacaccatagcctacttcgttctcctggttcttcaggtgattcttgtt 26813148  T
Q  177 ggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||| | |||||||||| ||| ||||||||||||||||||    
T  26813147 ggacaatttctttacccgtgtgctctatcaagtcatgtaa 26813108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 26885751 - 26885641
Alignment:
Q  106 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 205  Q
    ||||||| ||||||||||||| || || ||||||||||| | |||||||||||||||| |||||||||| || |||| |||||||||||||||||||| |    
T  26885751 taaaacatgaactatatcatcgtgacaccataacctactacgttctccaggctctttacttgattcttgccgaacgatttctttacccatgtcctctacc 26885652  T
Q  206 aagtcatgtaa 216  Q
    |||||||||||    
T  26885651 aagtcatgtaa 26885641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 25491785 - 25491930
Alignment:
Q  71 tcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgatt 170  Q
    ||||| |||||||||||||| || |||||||||||||||||  |||| ||||||||  | || || |||||||| | ||||||||| || |||  |||||    
T  25491785 tcatagatatcaatcttacttaccgtgttttctcttaaaacttgaaccatatcatcgggacaccacaacctactacgttctccaggatcattacgtgatt 25491884  T
Q  171 cttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  25491885 cttgtcgaacgacttctttacccatgtgctctatcaagttatgtaa 25491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 420
Target Start/End: Complemental strand, 26825345 - 26825174
Alignment:
Q  249 ctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatccttt 348  Q
    |||||||||||||||| |||||||||   | ||||||| ||||||||||||| ||||||| | ||||||||| || |   || |||||   |  | ||||    
T  26825345 ctatgagagatttttctgccaacacttgaacatgatgttttatgcaatggccgtaatgagtacgaagtatatcttcgaactcctcccaactatgttcttt 26825246  T
Q  349 gaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    |||||||||||||||||| || || |||||||| ||||||||||||||||||||||| |||||| |||||||    
T  26825245 gaagcaacaagcaatgtcgaggaaaacactttgttgctcttcttccaaagcatcatagcttactctaagtat 26825174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 26850348 - 26850283
Alignment:
Q  151 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26850348 tccaggctctttaattgattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaa 26850283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 25075517 - 25075438
Alignment:
Q  137 aacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  25075517 aacctactacgttctccaggctctttaattgattcatgtcggacgatttctttacccatgtcctctaacaagtcatgtaa 25075438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 26657643 - 26657533
Alignment:
Q  106 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 205  Q
    ||||||| ||||||| ||||  || || ||||||||||| | |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  26657643 taaaacatgaactatgtcattgtgacaccataacctactacgttctccgggctctttacttgattcttgtcggacgatttctttacccatgtcctctatc 26657544  T
Q  206 aagtcatgtaa 216  Q
    || || |||||    
T  26657543 aaatcgtgtaa 26657533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 26763614 - 26763504
Alignment:
Q  106 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 205  Q
    ||||||| ||||||| ||||  || || ||||||||||| | |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  26763614 taaaacatgaactatgtcattgtgacaccataacctactacgttctccgggctctttacttgattcttgtcggacgatttctttacccatgtcctctatc 26763515  T
Q  206 aagtcatgtaa 216  Q
    || || |||||    
T  26763514 aaatcgtgtaa 26763504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 27663671 - 27663826
Alignment:
Q  57 aaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccagg 156  Q
    |||||||||| || ||||| ||||||||||||||    ||||||| | |||||||| || |||||||||| || |  || |||||| | |  ||||||||    
T  27663671 aaataacaaattgttcatagatatcaatcttact----gtgttttgttttaaaacatgagctatatcatcatgacgccacaacctagtgcgctctccagg 27663766  T
Q  157 ctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||||||||||||||||||| | |||| ||||||| | ||||||||||||||||||    
T  27663767 ctctttaattgattcttgtcggactatttctatacccatatactctatcaagtcatgtaa 27663826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 248 - 420
Target Start/End: Complemental strand, 26657489 - 26657317
Alignment:
Q  248 tctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctt 347  Q
    |||||||||||||||||| |||||||||| | ||||||| |||||||||| ||||| |||| | ||||| | | || | | ||   | ||  ||||||||    
T  26657489 tctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctacatcctt 26657390  T
Q  348 tgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||  ||||||| || || | |||||||||||||| |||||| |||||| ||||||| ||||||||||||||    
T  26657389 tgaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtat 26657317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 248 - 420
Target Start/End: Complemental strand, 26763460 - 26763288
Alignment:
Q  248 tctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctt 347  Q
    |||||||||||||||||| |||||||||| | ||||||| |||||||||| ||||| |||| | ||||| | | || | | ||   | ||  ||||||||    
T  26763460 tctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctacatcctt 26763361  T
Q  348 tgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||  ||||||| || || | |||||||||||||| |||||| |||||| ||||||| ||||||||||||||    
T  26763360 tgaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtat 26763288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 216
Target Start/End: Complemental strand, 26951458 - 26951302
Alignment:
Q  56 taaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccag 155  Q
    ||||||| ||| || ||| | ||||||||||||||    |||||||||  ||||||| |||| ||||||||  |  | || |||||||| | ||||||||    
T  26951458 taaataataaattgttcacagatatcaatcttact----gtgttttcttgtaaaacatgaacaatatcatcacgagaccacaacctactgcgttctccag 26951363  T
Q  156 gctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    | ||| |||||||||||||||||| || |||| ||||||| ||||||||||||||||||||    
T  26951362 gttctctaattgattcttgtcggatgatttctatacccatatcctctatcaagtcatgtaa 26951302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 26979018 - 26978939
Alignment:
Q  137 aacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  26979018 aacctactgcgttctccaggttctttaattgattcttgtcggacgatttctatacccatatcctctatcaagtaatgtaa 26978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 2186486 - 2186376
Alignment:
Q  106 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 205  Q
    ||||||| |||||||||| || ||| | || |||||||| | || ||||||||||||   |||||||||||| |||| |||||||||||| |||||||||    
T  2186486 taaaacaggaactatatcttcatgggaccacaacctactacgttttccaggctcttttggtgattcttgtcgtacgatttctttacccatttcctctatc 2186387  T
Q  206 aagtcatgtaa 216  Q
    |||||||||||    
T  2186386 aagtcatgtaa 2186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 420
Target Start/End: Original strand, 25491976 - 25492146
Alignment:
Q  250 tatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttg 349  Q
    ||||| |||||||| |||||||  ||| |||||||   ||| ||||||||||||||||  ||||||||||| |||| ||||  ||||||  || ||||||    
T  25491976 tatgaaagattttttagccaactttccaagatgatagtttacgcaatggccataatgatcatgaagtatatttttgacatccgcccatttccaacctttg 25492075  T
Q  350 aagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||| ||||||  ||||| ||||||| ||| |||| || ||| |||||||||||||| || ||| |||||||    
T  25492076 aagaaacaagtcatgtctagaaagatactctgctccttttcctccaaagcatcatagctcactctaagtat 25492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 26637309 - 26637199
Alignment:
Q  106 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 205  Q
    ||||||| |||||||||| || || || || |||||||| | |||||||||||  |||  ||||||||||||||||| |||| ||||||| |||||||||    
T  26637309 taaaacatgaactatatcgtcatgacaccacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatc 26637210  T
Q  206 aagtcatgtaa 216  Q
    |||||||||||    
T  26637209 aagtcatgtaa 26637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 26743275 - 26743165
Alignment:
Q  106 taaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatc 205  Q
    ||||||| |||||||||| || || || || |||||||| | |||||||||||  |||  ||||||||||||||||| |||| ||||||| |||||||||    
T  26743275 taaaacatgaactatatcgtcatgacaccacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatc 26743176  T
Q  206 aagtcatgtaa 216  Q
    |||||||||||    
T  26743175 aagtcatgtaa 26743165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 420
Target Start/End: Original strand, 27663959 - 27664041
Alignment:
Q  338 tcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    |||||||||||||||||||||||||| |||| ||||||||| || || ||||||||||||| |||| | ||||||||||||||    
T  27663959 tcacatcctttgaagcaacaagcaatatccaaaaagacactctgttgttcttcttccaaagtatcaaagcttactttaagtat 27664041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 25546588 - 25546539
Alignment:
Q  167 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25546588 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 25546539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 26960825 - 26960684
Alignment:
Q  71 tcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgatt 170  Q
    ||||||||||||||||||||     | ||||||  ||||||| |||||||||||||  | || || |||||||| | || ||||||||||||||||||||    
T  26960825 tcatatatatcaatcttactt----ttttttcttgtaaaacatgaactatatcatcacgacaccacaacctactgcgttttccaggctctttaattgatt 26960730  T
Q  171 cttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    | ||||| || | |||  ||||||| ||||||||||||||||||||    
T  26960729 cctgtcgaacaatttccatacccatatcctctatcaagtcatgtaa 26960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 405
Target Start/End: Original strand, 27591727 - 27591833
Alignment:
Q  299 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaag 398  Q
    |||||||||| ||||||||| | |||| | |  ||| ||  ||||||||||| |||||||||||| |||| ||||||||| |||| ||||||||||||||    
T  27591727 ccataatgagcatgaagtatctgtttgactttctccaatctacatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcttccaaag 27591826  T
Q  399 catcata 405  Q
    |||||||    
T  27591827 catcata 27591833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 405
Target Start/End: Original strand, 27676326 - 27676432
Alignment:
Q  299 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaag 398  Q
    |||||||||  ||||||||| | || | | |||||| ||  ||||||||||| |||||||||||| |||| ||||||||| |||| |||||| |||||||    
T  27676326 ccataatgatgatgaagtatctgttcgacttcttccaatctacatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcgtccaaag 27676425  T
Q  399 catcata 405  Q
    |||||||    
T  27676426 catcata 27676432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 226
Target Start/End: Complemental strand, 26825543 - 26825374
Alignment:
Q  57 aaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccagg 156  Q
    |||||| ||| || ||||| ||||||||||||||||| |||||| |    |||||| |||  |||||||  || || || | ||| || | ||| || ||    
T  26825543 aaataaaaaattgttcataaatatcaatcttactcactgtgtttccctgcaaaacatgaataatatcattgtgacaccacagcctgctgcgttcaccggg 26825444  T
Q  157 ctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 226  Q
    |||||||  ||||| ||||||||| |||||||| |||||||||| |||||||||||||||  ||||||||    
T  26825443 ctctttagatgattgttgtcggactacttctttgcccatgtcctttatcaagtcatgtaatgtcacataa 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 29827417 - 29827341
Alignment:
Q  344 cctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||||||||||||| ||||| |||| ||| |  ||||| |||||||||||| |||||| |||||||||    
T  29827417 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcatcttcctccaaagcatcaaaacttattttaagtat 29827341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 28141161 - 28141087
Alignment:
Q  152 ccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 226  Q
    |||||||||||   |||||||||||| || | |||||||||||| ||||||||||||||||||||  ||||||||    
T  28141161 ccaggctcttttggtgattcttgtcgaacaatttctttacccatctcctctatcaagtcatgtaatgtcacataa 28141087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 420
Target Start/End: Original strand, 28296446 - 28296567
Alignment:
Q  299 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaag 398  Q
    |||||||||| ||||||||||| ||     |||| | ||||| ||||||||||||| ||||| ||||| ||||| ||| ||| ||  ||||| |||||||    
T  28296446 ccataatgagcatgaagtatattttcaagttctttcaattcatatcctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaag 28296545  T
Q  399 catcataacttactttaagtat 420  Q
    ||||| | ||||||||||||||    
T  28296546 catcaaagcttactttaagtat 28296567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 420
Target Start/End: Complemental strand, 28326954 - 28326833
Alignment:
Q  299 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaag 398  Q
    |||||||||| ||||||||||| ||     |||| | ||||| |||| |||||||| ||||||||||| ||||| ||| | ||||  ||||| |||||||    
T  28326954 ccataatgagcatgaagtatatcttcaagttctttcaattcatatccattgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaag 28326855  T
Q  399 catcataacttactttaagtat 420  Q
    ||||| | ||||||||||||||    
T  28326854 catcaaagcttactttaagtat 28326833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 420
Target Start/End: Complemental strand, 28504590 - 28504469
Alignment:
Q  299 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaag 398  Q
    |||||||||| ||||||||||| ||     |||| | ||||| |||| |||||||| ||||||||||| ||||| ||| | ||||  ||||| |||||||    
T  28504590 ccataatgagcatgaagtatatcttcaagttctttcaattcatatccattgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaag 28504491  T
Q  399 catcataacttactttaagtat 420  Q
    ||||| | ||||||||||||||    
T  28504490 catcaaagcttactttaagtat 28504469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 420
Target Start/End: Complemental strand, 28515627 - 28515506
Alignment:
Q  299 ccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaag 398  Q
    |||||||||| ||||||||||| ||     |||| | ||||| ||||||||||||| ||||| ||||| ||||| ||| ||| ||  ||||| |||||||    
T  28515627 ccataatgagcatgaagtatattttcaagttctttcaattcatatcctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaag 28515528  T
Q  399 catcataacttactttaagtat 420  Q
    ||||| | ||||||||||||||    
T  28515527 catcaaagcttactttaagtat 28515506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 29827613 - 29827548
Alignment:
Q  151 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||||||||   |||||||||||| || | ||||||||||||||| |||||||||||||||||    
T  29827613 tccaggctctttcggtgattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaa 29827548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 26938650 - 26938582
Alignment:
Q  148 ttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||| |||||| | |||||||||||  || | |||||||||||||||||| ||||||||||||||    
T  26938650 ttctccagcctctttgactgattcttgtctaacaatttctttacccatgtcctcaatcaagtcatgtaa 26938582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 28150798 - 28150734
Alignment:
Q  152 ccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||||||   |||||||||||| || | ||||||||||||||| |||||||||||||||||    
T  28150798 ccaggctcttttggtgattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaa 28150734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 29842547 - 29842611
Alignment:
Q  151 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 215  Q
    ||||||||||||  |||||||| |||| || | ||||||||||||||| ||||||||||||||||    
T  29842547 tccaggctctttcgttgattctggtcgtacaatttctttacccatgtcttctatcaagtcatgta 29842611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 29842743 - 29842819
Alignment:
Q  344 cctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||||||||||||| ||||| |||| ||| |  ||||| |||||||||||| | |||| |||||||||    
T  29842743 cctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtat 29842819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 420
Target Start/End: Complemental strand, 26938554 - 26938384
Alignment:
Q  250 tatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttg 349  Q
    |||||||||||| | | |||||||||| | ||||| | |||||||||| |||||||||| ||||||| ||| ||   | ||  || ||  ||| || |||    
T  26938554 tatgagagatttattaaccaacactccaacatgattttttatgcaatgaccataatgagcatgaagtttatcttcaacctcagccaatctacacccattg 26938455  T
Q  350 aagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    |||||||| | ||| ||||||||||||||||| |  ||||| ||||||  |||| | |||||| |||||||    
T  26938454 aagcaacacgtaatatccagaaagacactttgttcttcttcatccaaacaatcaaagcttactctaagtat 26938384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 28244228 - 28244150
Alignment:
Q  342 atcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| ||||||||||| ||||| ||| | ||||  ||||  |||||||||||| | ||||||||||||||    
T  28244228 atcctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtat 28244150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 421
Target Start/End: Complemental strand, 25075354 - 25075221
Alignment:
Q  288 ttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctc 387  Q
    |||||||||| ||||||||| | | |||||| | || | ||| | || ||||||| |  || ||| |||||||||| |||| ||||||||| || || ||    
T  25075354 ttatgcaatgaccataatgatattcaagtatctcttcgacatatgccgattcacaccaattaaagaaacaagcaatatccaaaaagacactctgttgttc 25075255  T
Q  388 ttcttccaaagcatcataacttactttaagtatt 421  Q
    ||| |||||||| ||| | |||||||||||||||    
T  25075254 ttcgtccaaagcgtcaaagcttactttaagtatt 25075221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 26978800 - 26978735
Alignment:
Q  355 acaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||| |||| ||||||||| || || ||||| |||||||||||| | ||||||||||||||    
T  26978800 acaagcaatatccaaaaagacactctgttgttcttcgtccaaagcatcaaagcttactttaagtat 26978735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 28240778 - 28240719
Alignment:
Q  350 aagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataactt 409  Q
    ||||||||||||||||| ||||| ||||||||||  ||||  |||||||||||| |||||    
T  28240778 aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatcaaaactt 28240719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 28097022 - 28097072
Alignment:
Q  166 tgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||||||  || | ||||||||||||||| |||||||||||||||||    
T  28097022 tgattcttgtcttacaatttctttacccatgtcttctatcaagtcatgtaa 28097072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 420
Target Start/End: Complemental strand, 26960545 - 26960480
Alignment:
Q  355 acaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||| |||| ||||||||| || || |||||  ||||||| ||||| ||||||||||||||    
T  26960545 acaagcaatatccaaaaagacactctgttgttcttcagccaaagcgtcatagcttactttaagtat 26960480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 28097194 - 28097258
Alignment:
Q  344 cctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataact 408  Q
    ||||||||||||||||||||||| ||||| |||||   ||  ||||| |||||||||||| ||||    
T  28097194 cctttgaagcaacaagcaatgtcgagaaaaacactcctctcatcttcctccaaagcatcaaaact 28097258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 12 - 420
Target Start/End: Original strand, 1957 - 2366
Alignment:
Q  12 agatgataatatttagtc-caaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaa 110  Q
    ||||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1957 agatgatcatatttagttacaaaaagagcaaagttgtattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttttctcttaaaa 2056  T
Q  111 cacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtc 210  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2057 cacgaactatatcatcctgacagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtc 2156  T
Q  211 atgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaa 310  Q
    ||||||||||||||||| | |||||||||   |||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2157 atgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaaccaacactcctagatgatgtgttatgcaatggccataatgagaa 2256  T
Q  311 tgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataactta 410  Q
    | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  2257 ttaagtatatatttggcatcttcccatttacatcttttgaagcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataactta 2356  T
Q  411 ctttaagtat 420  Q
    ||||||||||    
T  2357 ctttaagtat 2366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 4 - 420
Target Start/End: Original strand, 266760 - 267167
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||      
T  266760 ctagtatgagatggtcatattttgtccaaaaagagcaaagtcgtattaaaactaaataacaaattgatcattgatatcaatcttactcacagtgttttta 266859  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     |||||||| ||||||||||||| || || ||||||||||||| ||||||||||||||||  ||||||||| ||||| ||||||||||||||||||||||    
T  266860 tttaaaacatgaactatatcatcttgacaccataacctacttcgttctccaggctctttaggtgattcttggcggaccacttctttacccatgtcctcta 266959  T
Q  204 tcaagtcatgtaacatcacataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccata 303  Q
    ||| |||||||||  |||||| |      |||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  266960 tcatgtcatgtaatgtcacatgac-----tat----aatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcagtggccata 267050  T
Q  304 atgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatca 403  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||| |||||    
T  267051 atgagaatgaagtatatgtttggcatcttcccattcatatcctttgaagcaacaagcaatgtctaaaaagacactctgctcctcttcttccaaaccatca 267150  T
Q  404 taacttactttaagtat 420  Q
    || || |||||||||||    
T  267151 tagctcactttaagtat 267167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 420
Target Start/End: Complemental strand, 26137571 - 26137243
Alignment:
Q  86 ttactcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgactt 185  Q
    |||||||| || |||||| |||||||| |||||||||| || ||  | || |||||||| | || |||||| |||||   ||||||||||||||| | ||    
T  26137571 ttactcactgtattttcttttaaaacatgaactatatcttcatgaaaccacaacctactgcgttttccaggttctttgggtgattcttgtcggacaattt 26137472  T
Q  186 ctttacccatgtcctctatcaagtcatgtaacatcacataatggccatattcccaatattggtct--atgagagatttttcagccaacactcctagatga 283  Q
    |||||||||| ||||||||||||||||||||   |||| ||   |||||     || |||  |||  ||||||| ||| ||| |||||||||| | ||||    
T  26137471 ctttacccatatcctctatcaagtcatgtaatgccacaaaa---ccata-----aaaattaatcttcatgagagctttatcaaccaacactccaacatga 26137380  T
Q  284 tgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgct 383  Q
      | ||||||||||| ||||| ||| ||||||||| | || | | |||  | ||| ||| |||||||||||||||||||| |||| ||| |||||||| |    
T  26137379 ctttttatgcaatggtcataacgagcatgaagtatcttttggacttctgtcaatttacaccctttgaagcaacaagcaatatccaaaaatacactttgtt 26137280  T
Q  384 gctcttcttccaaagcatcataacttactttaagtat 420  Q
    | ||||| |||||||||||||| |||||| |||||||    
T  26137279 gttcttcgtccaaagcatcatagcttactctaagtat 26137243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 416
Target Start/End: Original strand, 28126119 - 28126498
Alignment:
Q  26 agtccaaaaagagcaaagtcgt-attaaaactaaa-taacaaaatgatcatatatatcaatcttactcacagtgttttctct-taaaacacgaactatat 122  Q
    |||||||||||||  ||||| | |||||| ||||| ||||||| || ||||| |||||||||||||     ||||||| ||| || |||| |||||||||    
T  28126119 agtccaaaaagagtgaagtcatgattaaagctaaaataacaaattgttcatagatatcaatcttacc----gtgtttt-tctgtagaacatgaactatat 28126213  T
Q  123 catcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcac 222  Q
    |||  || || ||||||||  | | ||||||||||||||||  ||||||||  ||||||| |||||||||| | ||||||||||||||||||||  ||||    
T  28126214 cattgtgacaccataacctgttgcgttctccaggctctttacgtgattctttccggacgatttctttacccgtatcctctatcaagtcatgtaatgtcac 28126313  T
Q  223 ataatggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatat 322  Q
    ||| ||    ||||   |||     || ||||||||||||||| |||||||||| | ||||||  ||||||||||||||||||||| ||||||||| | |    
T  28126314 atattg--agtatt---aat----ctcaatgagagatttttcaaccaacactccaacatgatgctttatgcaatggccataatgagcatgaagtatcttt 28126404  T
Q  323 ttggcatcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaa 416  Q
    |   | |||  | ||  | | ||||||||||| ||||| || || ||||||||||||||||  ||||| |||||||||||||| |||| |||||    
T  28126405 tcaacctctgtcaatctataccctttgaagcagcaagctatatcgagaaagacactttgctcatcttcctccaaagcatcatagcttagtttaa 28126498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 248 - 416
Target Start/End: Original strand, 28132156 - 28132324
Alignment:
Q  248 tctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctt 347  Q
    |||||||||||||||||  |||||||||| | ||||||| ||||||||||||||| ||||| ||||||||| | || | |   |  | ||  | | || |    
T  28132156 tctatgagagatttttcgaccaacactccaacatgatgttttatgcaatggccattatgagcatgaagtatctcttcgaccattgtcaatctatacccct 28132255  T
Q  348 tgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaa 416  Q
    ||||||||||||| || ||||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  28132256 tgaagcaacaagctatatccagaaagacactttgctcctcttcctccaaagcatcgtaacttactttaa 28132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 5922218 - 5922279
Alignment:
Q  342 atcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatca 403  Q
    |||||||||||||||||||||| || ||||| ||||||| ||  ||||||||||||||||||    
T  5922218 atcctttgaagcaacaagcaatatcaagaaaaacacttttctcttcttcttccaaagcatca 5922279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 5921971 - 5922098
Alignment:
Q  89 ctcacagtgttttctcttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctt 188  Q
    ||||| || ||||||  ||||||  |||||||||| ||  |||| ||||||||||| |  | ||||||||||||   |||||||||||  || | |||||    
T  5921971 ctcaccgtattttcttctaaaacttgaactatatcttcagggcaccataacctactgcgctttccaggctctttcggtgattcttgtctaacaatttctt 5922070  T
Q  189 tacccatgtcctctatcaagtcatgtaa 216  Q
    | ||||||||||||||||  ||||||||    
T  5922071 ttcccatgtcctctatcacatcatgtaa 5922098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 28132016 - 28132118
Alignment:
Q  114 gaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatg 213  Q
    ||||||||||||  || || ||||||||||| | ||||||||| || |||   |||||||   |||||| |||||||||  |||| ||||||||||||||    
T  28132016 gaactatatcattgtgacaccataacctactgcgttctccaggttccttacacgattctttatggacgatttctttacctgtgtcttctatcaagtcatg 28132115  T
Q  214 taa 216  Q
    |||    
T  28132116 taa 28132118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 552 - 340
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  552 ctagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacatagatatcaatcttactcacagtgttttct 453  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     ||||||||  |||||||||||| || || |||||||||||||||||||| |||||||||   ||||||||||| |||||||||||||||||||||||||    
T  452 tttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctctttaggcgattcttgtcgtacgacttctttacccatgtcctcta 353  T
Q  204 tcaagtcatgtaa 216  Q
    | |||||||||||    
T  352 taaagtcatgtaa 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 253 - 420
Target Start/End: Complemental strand, 291 - 124
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||| ||     || | |||| ||||||||||||||    
T  291 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag 192  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  191 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtat 124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 9254 - 9058
Alignment:
Q  20 atatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaacta 119  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  9254 atatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacatagatatcaatcttactcacagtgttttcttttaaaacattaacta 9155  T
Q  120 tatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||| || || |||||||||||||||||||| |||||||||   ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  9154 tatcatcttgacaccataacctacttctttctcctggctctttaggcgattcttgtcgtacgacttctttacccatgtcctctataaagtcatgtaa 9058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 253 - 420
Target Start/End: Complemental strand, 9009 - 8842
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||| ||     || | |||| ||||||||||||||    
T  9009 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag 8910  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8909 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcataacttactttaagtat 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 128; Significance: 5e-66; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 3114 - 3325
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  3114 ctagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacatagatatcaatcttactcacagtgttttct 3213  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     ||||||||  |||||||||||| |  || ||||| |||||||||||||||||||||||    |||||||||||||||||||||||||||||||||| ||    
T  3214 tttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctctttgggcgattcttgtcggacgacttctttacccatgtccttta 3313  T
Q  204 tcaagtcatgta 215  Q
    ||||||||||||    
T  3314 tcaagtcatgta 3325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 12077 - 12288
Alignment:
Q  4 ctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatatatatcaatcttactcacagtgttttct 103  Q
    ||||||| ||||| | |||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  12077 ctagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattgaacatagatatcaatcttactcacagtgttttct 12176  T
Q  104 cttaaaacacgaactatatcatcctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctcta 203  Q
     ||||||||  |||||||||||| |  || ||||| |||||||||||||||||||||||    |||||||||||||||||||||||||||||||||| ||    
T  12177 tttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctctttgggcgattcttgtcggacgacttctttacccatgtccttta 12276  T
Q  204 tcaagtcatgta 215  Q
    ||||||||||||    
T  12277 tcaagtcatgta 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 420
Target Start/End: Original strand, 3372 - 3539
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||     || |||||| ||||||||||||||    
T  3372 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactcctcccatccacatcctttgaag 3471  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  3472 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtat 3539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 253 - 420
Target Start/End: Original strand, 12335 - 12502
Alignment:
Q  253 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacatcctttgaag 352  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||     || | |||| ||||||||||||||    
T  12335 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactccttccatccacatcctttgaag 12434  T
Q  353 caacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  12435 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtat 12502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 28 - 421
Target Start/End: Complemental strand, 61314 - 60923
Alignment:
Q  28 tccaaaaagagcaaagtcgtattaaaa-ctaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatc 126  Q
    |||||||||||||||||| | |||||| |||||||||||| || || |  |||||||||||||||||||||||||||  || |||   || |||||| |     
T  61314 tccaaaaagagcaaagtcatgttaaaagctaaataacaaattgttcctgcatatcaatcttactcacagtgttttcttctagaacttcaaatatatcctt 61215  T
Q  127 ctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 226  Q
     |   | |||||||| ||||||| |||||||||   |  ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||   ||||| |    
T  61214 ttcaaaccataacctgcttctttttccaggctcaaaaggtgattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatga 61115  T
Q  227 tggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttgg 326  Q
        | |||||  |||   |||| |||||| |||||||| | | |||| | | ||||||  |||||||||| |||||||||| ||||||||| | ||||     
T  61114 ctatcgtattcaaaat---ggtcaatgagacatttttcaactagcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttga 61018  T
Q  327 catcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtatt 421  Q
    | | |||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||| || ||||||||||||    
T  61017 ccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaagaatcatagctcactttaagtatt 60923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 28 - 421
Target Start/End: Complemental strand, 18075506 - 18075115
Alignment:
Q  28 tccaaaaagagcaaagtcgtattaaaa-ctaaataacaaaatgatcatatatatcaatcttactcacagtgttttctcttaaaacacgaactatatcatc 126  Q
    |||||||||||||||||| | |||||| |||||||||||| || || |  |||||||||||||||||||||||||||  || |||   || |||||| |     
T  18075506 tccaaaaagagcaaagtcatgttaaaagctaaataacaaattgttcctgcatatcaatcttactcacagtgttttcttctagaacttcaaatatatcctt 18075407  T
Q  127 ctggcagcataacctacttctttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataa 226  Q
     |   | |||||||| ||||||| |||||||||   |  ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||   ||||| |    
T  18075406 ttcaaaccataacctgcttctttttccaggctcaaaaggtgattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatga 18075307  T
Q  227 tggccatattcccaatattggtctatgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttgg 326  Q
        | |||||  |||   |||| |||||| |||||||| | | |||| | | ||||||  |||||||||| |||||||||| ||||||||| | ||||     
T  18075306 ctatcgtattcaaaat---ggtcaatgagacatttttcaactagcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttga 18075210  T
Q  327 catcttcccattcacatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtatt 421  Q
    | | |||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||| || ||||||||||||    
T  18075209 ccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctcttcctccaaagaatcatagctcactttaagtatt 18075115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 18654220 - 18654300
Alignment:
Q  340 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||  |||||||||| |||| |||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  18654220 acatcctttgaacaaacaagcaatatccaaaaagacactttgttgttcttcatccaaagcatcaaaacttactttaagtat 18654300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 18688369 - 18688449
Alignment:
Q  340 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || ||||| |||||||||||| | ||||||||||||||    
T  18688369 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtat 18688449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 18698143 - 18698223
Alignment:
Q  340 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || ||||| |||||||||||| | ||||||||||||||    
T  18698143 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtat 18698223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 18730247 - 18730327
Alignment:
Q  340 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || ||||| |||||||||||| | ||||||||||||||    
T  18730247 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtat 18730327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 18678303 - 18678383
Alignment:
Q  340 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| |||||||||| |||| ||||||| |||| || ||||| |||||||||||| | ||||||||||||||    
T  18678303 acatcctttgaagaaacaagcaatatccaaaaagacaatttgttgttcttcgtccaaagcatcaaagcttactttaagtat 18678383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 18722828 - 18722908
Alignment:
Q  340 acatcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| |||||||||| |||| |||||||||||| || |||||  ||||||||||| | ||||||||||||||    
T  18722828 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgcccaaagcatcaaagcttactttaagtat 18722908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 18654042 - 18654105
Alignment:
Q  153 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||| ||||  ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18654042 caggctgtttaggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaa 18654105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 18678122 - 18678185
Alignment:
Q  153 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||||||   ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18678122 caggctctttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaa 18678185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 18688179 - 18688242
Alignment:
Q  153 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    |||||||||||  ||||||||  ||||| | ||||||||||||| |||||| ||||||||||||    
T  18688179 caggctctttaggtgattctttccggacaatttctttacccatgacctctagcaagtcatgtaa 18688242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 18697965 - 18698028
Alignment:
Q  153 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||||||   ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18697965 caggctctttgggtgattctttccggacgatttctttacccatggcctctagcaagtcatgtaa 18698028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 18730060 - 18730123
Alignment:
Q  153 caggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 216  Q
    ||||||||||   ||||||||  ||||||| ||||||||||||| |||||| ||||||||||||    
T  18730060 caggctctttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaa 18730123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 17991755 - 17991822
Alignment:
Q  148 ttctccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 215  Q
    ||||||||||||||||  ||||||||| || |||| ||||||||||||||||||||||||||||||||    
T  17991755 ttctccaggctctttaggtgattcttgccgaacgatttctttacccatgtcctctatcaagtcatgta 17991822  T

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Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 3281090 - 3281014
Alignment:
Q  344 cctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||| ||||||||||||||||| ||||| ||||||||||  ||||| |||||||||||| |||| |||||||||||    
T  3281090 cctttaaagcaacaagcaatgtcgagaaaaacactttgctcgtcttcctccaaagcatcaaaactcactttaagtat 3281014  T

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Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 421
Target Start/End: Complemental strand, 16692300 - 16692221
Alignment:
Q  342 atcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtatt 421  Q
    ||||||||||||||||||||||||||| ||| ||||| |  |  ||||| ||||||  |||| |||||||||||||||||    
T  16692300 atcctttgaagcaacaagcaatgtccaaaaaaacactcttttcatcttcctccaaactatcaaaacttactttaagtatt 16692221  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 44390 - 44312
Alignment:
Q  342 atcctttgaagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataacttactttaagtat 420  Q
    ||||||||||||| ||||||||||| ||||| ||| | ||||  ||||  |||||||||||| | ||||||||||||||    
T  44390 atcctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtat 44312  T

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Target: scaffold0038; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 40940 - 40881
Alignment:
Q  350 aagcaacaagcaatgtccagaaagacactttgctgctcttcttccaaagcatcataactt 409  Q
    ||||||||||||||||| ||||| ||||||||||  ||||  |||||||||||| |||||    
T  40940 aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatcaaaactt 40881  T

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