View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12952_low_5 (Length: 688)

Name: NF12952_low_5
Description: NF12952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12952_low_5
NF12952_low_5
[»] chr8 (26 HSPs)
chr8 (1-681)||(15687401-15688084)
chr8 (1-47)||(28463619-28463665)
chr8 (1-47)||(8587178-8587224)
chr8 (4-43)||(17006923-17006962)
chr8 (4-43)||(17570285-17570324)
chr8 (1-47)||(54620-54666)
chr8 (1-47)||(2890170-2890216)
chr8 (1-47)||(6552731-6552777)
chr8 (1-47)||(7785786-7785832)
chr8 (1-47)||(33289269-33289315)
chr8 (1-47)||(39571211-39571257)
chr8 (1-54)||(33057670-33057723)
chr8 (1-47)||(3304286-3304332)
chr8 (1-47)||(7012247-7012293)
chr8 (1-47)||(7805707-7805753)
chr8 (1-47)||(12343148-12343194)
chr8 (1-47)||(12763662-12763708)
chr8 (1-43)||(24692054-24692096)
chr8 (1-47)||(25601008-25601054)
chr8 (1-47)||(31654689-31654735)
chr8 (1-47)||(32211371-32211417)
chr8 (1-47)||(43199362-43199408)
chr8 (1-47)||(44498195-44498241)
chr8 (1-38)||(13578933-13578970)
chr8 (1-38)||(15888369-15888406)
chr8 (4-36)||(31758706-31758738)
[»] chr1 (23 HSPs)
chr1 (1-47)||(16448184-16448230)
chr1 (1-47)||(11897062-11897108)
chr1 (1-47)||(11897130-11897176)
chr1 (1-47)||(17556829-17556875)
chr1 (1-47)||(9981723-9981769)
chr1 (1-47)||(11796009-11796055)
chr1 (1-47)||(12483636-12483682)
chr1 (1-47)||(14984913-14984959)
chr1 (1-47)||(25694395-25694441)
chr1 (1-47)||(27159366-27159412)
chr1 (1-47)||(31842803-31842849)
chr1 (1-47)||(39401974-39402020)
chr1 (1-47)||(44668101-44668147)
chr1 (1-47)||(47777489-47777535)
chr1 (11-54)||(37552227-37552270)
chr1 (1-47)||(1050964-1051010)
chr1 (1-47)||(26471073-26471119)
chr1 (1-47)||(34042772-34042818)
chr1 (1-47)||(44955214-44955260)
chr1 (1-47)||(47216707-47216753)
chr1 (8-45)||(17556762-17556799)
chr1 (1-38)||(21537945-21537982)
chr1 (1-38)||(47588354-47588391)
[»] chr7 (24 HSPs)
chr7 (1-55)||(46877666-46877720)
chr7 (4-47)||(7269413-7269456)
chr7 (1-47)||(1738455-1738501)
chr7 (1-47)||(7240825-7240871)
chr7 (1-47)||(7482301-7482347)
chr7 (1-47)||(9268832-9268878)
chr7 (1-47)||(22285775-22285821)
chr7 (1-47)||(33418452-33418498)
chr7 (1-47)||(38441536-38441582)
chr7 (1-47)||(46840936-46840982)
chr7 (1-46)||(9575485-9575530)
chr7 (1-54)||(36016197-36016250)
chr7 (1-45)||(38063923-38063967)
chr7 (1-36)||(46877568-46877603)
chr7 (1-43)||(94330-94372)
chr7 (1-47)||(4790324-4790370)
chr7 (1-47)||(7269481-7269527)
chr7 (5-47)||(23314147-23314189)
chr7 (1-47)||(31319407-31319453)
chr7 (1-43)||(36583471-36583513)
chr7 (1-38)||(1565746-1565783)
chr7 (8-45)||(9575419-9575456)
chr7 (2-47)||(40840127-40840172)
chr7 (1-45)||(7661152-7661196)
[»] chr3 (25 HSPs)
chr3 (1-47)||(9027150-9027196)
chr3 (1-54)||(22722007-22722060)
chr3 (1-47)||(8817394-8817440)
chr3 (1-47)||(9111502-9111548)
chr3 (1-47)||(10298055-10298101)
chr3 (1-47)||(17653788-17653834)
chr3 (1-47)||(19557060-19557106)
chr3 (1-43)||(33942944-33942986)
chr3 (1-47)||(34080038-34080084)
chr3 (1-47)||(37508997-37509043)
chr3 (1-47)||(40691004-40691050)
chr3 (1-47)||(42507363-42507409)
chr3 (1-47)||(48340473-48340519)
chr3 (1-47)||(49823389-49823435)
chr3 (1-54)||(42170347-42170400)
chr3 (1-36)||(14848276-14848311)
chr3 (1-47)||(2787840-2787886)
chr3 (1-47)||(4238670-4238716)
chr3 (1-47)||(8437501-8437547)
chr3 (1-47)||(21295334-21295380)
chr3 (1-47)||(38964468-38964514)
chr3 (1-43)||(43323072-43323114)
chr3 (1-47)||(44785404-44785450)
chr3 (1-47)||(46208106-46208152)
chr3 (1-47)||(51406749-51406795)
[»] chr2 (24 HSPs)
chr2 (1-47)||(41492904-41492950)
chr2 (1-54)||(16243784-16243837)
chr2 (1-54)||(44397623-44397676)
chr2 (1-47)||(3055634-3055680)
chr2 (1-47)||(6648527-6648573)
chr2 (1-47)||(9047763-9047809)
chr2 (1-47)||(12337945-12337991)
chr2 (1-47)||(13197718-13197764)
chr2 (1-47)||(15372302-15372348)
chr2 (1-47)||(15896918-15896964)
chr2 (1-47)||(37990021-37990067)
chr2 (1-47)||(38917530-38917576)
chr2 (1-47)||(41478647-41478693)
chr2 (1-47)||(44398762-44398808)
chr2 (1-38)||(12170416-12170453)
chr2 (1-45)||(36688892-36688936)
chr2 (1-36)||(16734802-16734837)
chr2 (1-44)||(16734859-16734902)
chr2 (1-47)||(13344560-13344606)
chr2 (1-47)||(16044325-16044371)
chr2 (1-47)||(30099190-30099236)
chr2 (1-43)||(31150665-31150707)
chr2 (1-47)||(37666618-37666664)
chr2 (4-36)||(39724289-39724321)
[»] chr4 (28 HSPs)
chr4 (1-54)||(41615677-41615730)
chr4 (1-36)||(41594673-41594708)
chr4 (1-47)||(3422136-3422182)
chr4 (1-47)||(5986952-5986998)
chr4 (1-47)||(6121901-6121947)
chr4 (1-47)||(17236864-17236910)
chr4 (1-47)||(47833687-47833733)
chr4 (1-47)||(51894590-51894636)
chr4 (1-38)||(50430494-50430531)
chr4 (5-57)||(40913187-40913239)
chr4 (1-47)||(3372197-3372243)
chr4 (1-47)||(3904691-3904737)
chr4 (1-47)||(3993052-3993098)
chr4 (1-47)||(4780371-4780417)
chr4 (1-47)||(7579386-7579432)
chr4 (1-47)||(20538694-20538740)
chr4 (1-47)||(33621872-33621918)
chr4 (1-47)||(41469774-41469820)
chr4 (1-47)||(42797808-42797854)
chr4 (1-47)||(43900625-43900671)
chr4 (5-47)||(46797805-46797847)
chr4 (1-47)||(47838625-47838671)
chr4 (1-47)||(48336339-48336385)
chr4 (1-47)||(53337446-53337492)
chr4 (1-38)||(17344289-17344326)
chr4 (235-272)||(19405411-19405448)
chr4 (1-46)||(52756751-52756796)
chr4 (1-45)||(25855093-25855137)
[»] chr6 (18 HSPs)
chr6 (1-40)||(14236699-14236738)
chr6 (1-47)||(2830411-2830457)
chr6 (1-47)||(6330191-6330237)
chr6 (1-47)||(8099606-8099652)
chr6 (1-47)||(8382977-8383023)
chr6 (1-47)||(9644772-9644818)
chr6 (1-47)||(9650789-9650835)
chr6 (1-47)||(11572153-11572199)
chr6 (1-47)||(13853601-13853647)
chr6 (1-47)||(26602399-26602445)
chr6 (1-54)||(8186443-8186496)
chr6 (1-46)||(8417802-8417847)
chr6 (1-54)||(33052795-33052848)
chr6 (1-44)||(28747145-28747188)
chr6 (1-47)||(6068642-6068688)
chr6 (1-47)||(35031009-35031055)
chr6 (1-38)||(7597053-7597090)
chr6 (1-45)||(14936533-14936577)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-47)||(49581-49627)
[»] chr5 (16 HSPs)
chr5 (1-47)||(6126900-6126946)
chr5 (1-47)||(9395426-9395472)
chr5 (1-47)||(13103100-13103146)
chr5 (1-47)||(17025700-17025746)
chr5 (1-47)||(23360018-23360064)
chr5 (1-47)||(36563546-36563592)
chr5 (1-47)||(41989415-41989461)
chr5 (1-44)||(11795244-11795287)
chr5 (1-48)||(36595781-36595828)
chr5 (7-37)||(9152157-9152187)
chr5 (1-43)||(13033127-13033169)
chr5 (1-47)||(21576022-21576068)
chr5 (1-47)||(37148963-37149009)
chr5 (1-47)||(37642030-37642076)
chr5 (250-287)||(14817810-14817847)
chr5 (2-38)||(35584450-35584486)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-43)||(1411-1453)
[»] scaffold0482 (1 HSPs)
scaffold0482 (1-47)||(12936-12982)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-47)||(6139-6185)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-47)||(23861-23907)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-38)||(2-39)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-37)||(231379-231415)


Alignment Details
Target: chr8 (Bit Score: 570; Significance: 0; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 1 - 681
Target Start/End: Complemental strand, 15688084 - 15687401
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagttttctagagtagaataagtatagcagcatgcctgctgttagttaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagttttctagagtagaataagtatagcagcatgcctgctgttagttaca 15687985  T
Q  101 cagaccttcttgttatggtcagcaggtcaatttcactattctgcctgcttaatgtatactaactgtggttcaacctatactggttatcaatatcttacga 200  Q
    |||||||||||||||||||| |||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15687984 cagaccttcttgttatggtcggcaggtc-----------tctgcctgcttaatgtatactaactgtggttcaacctatactggttatcaatatcttacga 15687896  T
Q  201 tacacgtaacttgtattcgaaacaagactgagttattgatatgaattgttgtgcatatctatttttgacatgaatctcgatgcatttcaatgaatctcaa 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15687895 tacacgtaacttgtattcgaaacaaaactgagttattgatatgaattgttgtgcatatctatttatgacatgaatctcgatgcatttcaatgaatctcaa 15687796  T
Q  301 ttcattatatgattagcagcttgcccttatctttgtgtagataatcactattttttgtcaacttcgtgtttgttgccactttcttttgtcatcttgattt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15687795 ttcattatatgattagcagcttgcccttatctttgtgtagataatcactattttttgtcaacttcgtgtttcttgccactttcttttgtcatcttgattt 15687696  T
Q  401 ataacataagtcgttaattattttgaagtttcaatatgatataagtgcttatgcttttatgcaaaccccttgtttttactttaaaatgtcatatttcatt 500  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15687695 ataacttaagtcgttaattattttgaagtttcaatttgatataagtgcttattcttttatgcaaaccccttgtttttactttaaaatgtcatatttcatt 15687596  T
Q  501 ggtcatgtatacattaatagattcaattcacgtttcataaaatagatcttccagattcacaatttgaatatcgact--------------atggttgtca 586  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||              ||||||||||    
T  15687595 ggtcatgtatacattaatagattcaattcacgtttcggaaaatagatcttccagattcacaatttgaatatcgacttgataatgacaaccatggttgtca 15687496  T
Q  587 agtacaccattagaatatattacaacatgaaattaggagtacccttgtttcagagctatttatatgatgatgttaaatctgttttatgttctctg 681  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15687495 agtacaccattagaatatattacaacatgaaattaggagtacctttgtttcagagctatttatatgatgatgttaaatctgttttatgttctctg 15687401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28463665 - 28463619
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccgg 28463619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8587224 - 8587178
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccgg 8587178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 17006962 - 17006923
Alignment:
Q  4 catcaacttttgttgacccaactttctcttataaacagga 43  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  17006962 catcaacttttgttgacccaactttctcttataaatagga 17006923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 17570285 - 17570324
Alignment:
Q  4 catcaacttttgttgacccaactttctcttataaacagga 43  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  17570285 catcaacttttgttgacccaactttctcttataaatagga 17570324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54666 - 54620
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  54666 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 54620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2890216 - 2890170
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  2890216 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 2890170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6552731 - 6552777
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6552731 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 6552777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7785832 - 7785786
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  7785832 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 7785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33289315 - 33289269
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  33289315 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 33289269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39571257 - 39571211
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39571257 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 39571211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33057670 - 33057723
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||| ||||||||||| |||||||||||||||| | |||||| ||||||    
T  33057670 atacatcaatttttgttgaccaaactttctcttataaataagaccggatggagt 33057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3304332 - 3304286
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||    
T  3304332 atacatcaacttttgttgacccaaaattttcttataaataggaccgg 3304286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7012247 - 7012293
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  7012247 atacatcaacttttgttgatccaaaattctcttataaataggaccgg 7012293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7805753 - 7805707
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  7805753 atacatcaacttttgctgacccaaaattctcttataaataggaccgg 7805707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12343194 - 12343148
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  12343194 atacatcaacttttgttgaccaaaaattctcttataaataggaccgg 12343148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12763708 - 12763662
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||    
T  12763708 atacatcaacttttgttgacccaaaattatcttataaataggaccgg 12763662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24692054 - 24692096
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||    
T  24692054 atacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25601054 - 25601008
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||| |||||||||||||||||  |||||||||||| ||||||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccgg 25601008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31654689 - 31654735
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||| ||||||| ||||||||    
T  31654689 atacatcaacttttgttgacccaaaattcttttataaataggaccgg 31654735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32211417 - 32211371
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  32211417 atacatcaatttttgttgacccaaaattctcttataaataggaccgg 32211371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43199408 - 43199362
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  43199408 atacatcaacttttgttgaccaaaaattctcttataaataggaccgg 43199362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44498241 - 44498195
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||| |||||||||  |||||||||||| ||||||||    
T  44498241 atacatcaacttttattgacccaaaattctcttataaataggaccgg 44498195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13578933 - 13578970
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  13578933 atacatcaacttttgttgacccaaaattctcttataaa 13578970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15888406 - 15888369
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  15888406 atacatcaacttttgttgacccaaaattctcttataaa 15888369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 31758706 - 31758738
Alignment:
Q  4 catcaacttttgttgacccaactttctcttata 36  Q
    |||||||||||||||||| ||||||||||||||    
T  31758706 catcaacttttgttgacctaactttctcttata 31758738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16448184 - 16448230
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  16448184 atacatcaacttttgttgacccaactttctcttataaataggaccgg 16448230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11897108 - 11897062
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  11897108 atacatcaacttttgttgacctaactttctcttataaataggaccgg 11897062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11897130 - 11897176
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  11897130 atacatcaacttttgttgacccaaatttctcttataaataggaccgg 11897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17556829 - 17556875
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  17556829 atacatcaacttttgttgacccaagtttctcttataaataggaccgg 17556875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9981723 - 9981769
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9981723 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 9981769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11796009 - 11796055
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  11796009 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 11796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12483682 - 12483636
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  12483682 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 12483636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14984913 - 14984959
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  14984913 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 14984959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25694395 - 25694441
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  25694395 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 25694441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27159412 - 27159366
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  27159412 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 27159366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31842849 - 31842803
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  31842849 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 31842803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39402020 - 39401974
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39402020 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 39401974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44668147 - 44668101
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44668147 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 44668101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47777535 - 47777489
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  47777535 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 47777489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 37552227 - 37552270
Alignment:
Q  11 ttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||    
T  37552227 ttttgttgacccaaatttctcttataaataggaccggggggagt 37552270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1050964 - 1051010
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  1050964 atacatcaactttagttgacccaaaattctcttataaataggaccgg 1051010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26471119 - 26471073
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  26471119 atacatcaacttttgttgatccaaaattctcttataaataggaccgg 26471073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34042772 - 34042818
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||    
T  34042772 atacatcaacttttgttgacccaaaattctcttataaatagaaccgg 34042818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44955260 - 44955214
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  44955260 atacatcaacttttgttgacctaaaattctcttataaataggaccgg 44955214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47216753 - 47216707
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||    
T  47216753 atacatcaacttttgttgacccaaaattctcttataaatagtaccgg 47216707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 17556799 - 17556762
Alignment:
Q  8 aacttttgttgacccaactttctcttataaacaggacc 45  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  17556799 aacttttgttgacctaactttctcttataaataggacc 17556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21537945 - 21537982
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  21537945 atacatcaacttttgttgactcaattttctcttataaa 21537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47588391 - 47588354
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  47588391 atacatcaacttttgttgacccaaaattctcttataaa 47588354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46877666 - 46877720
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagtt 55  Q
    |||||| ||||||||||||||||||||||||||||| | |||||||| |||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccggatggagtt 46877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 7269456 - 7269413
Alignment:
Q  4 catcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||| |||||||||||||||||||| ||||||||    
T  7269456 catcaacttttgttaacccaactttctcttataaataggaccgg 7269413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1738501 - 1738455
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  1738501 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 1738455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7240825 - 7240871
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  7240825 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 7240871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7482301 - 7482347
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  7482301 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 7482347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9268832 - 9268878
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9268832 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 9268878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22285775 - 22285821
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  22285775 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 22285821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33418452 - 33418498
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  33418452 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 33418498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38441536 - 38441582
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  38441536 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 38441582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 46840936 - 46840982
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  46840936 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 46840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9575485 - 9575530
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccg 46  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||    
T  9575485 atacatcaagttttgttgaccaaactttctcttataaataggaccg 9575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36016250 - 36016197
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||||||||||||||||||  |||||||||||| |||||| | ||||||    
T  36016250 atacatcaacttttgttgacccaaaattctcttataaataggaccagatggagt 36016197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38063967 - 38063923
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggacc 45  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||    
T  38063967 atacatcaacttttgttgacccaaaattctcttataaataggacc 38063923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 46877603 - 46877568
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttata 36  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46877603 atacatcaactcttgttgacccaactttctcttata 46877568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 94372 - 94330
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    ||||||||||||||||||||||||  |||||||||||| ||||    
T  94372 atacatcaacttttgttgacccaaaattctcttataaatagga 94330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4790324 - 4790370
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4790324 atacatcaacttttattgacccaaaattctcttataaataggaccgg 4790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7269481 - 7269527
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||| |||||||||||||||||| ||||||||| | ||||||    
T  7269481 atacatcaatttttgttgacccaactttttcttataaataagaccgg 7269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 23314189 - 23314147
Alignment:
Q  5 atcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||  |||||||||||| ||||||||    
T  23314189 atcaacttttgttgacccaaaattctcttataaataggaccgg 23314147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31319453 - 31319407
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||    
T  31319453 atacatcaacttttgttgacccaaaattctcttataaatagaaccgg 31319407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36583471 - 36583513
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    ||||||||||||||||||||||||  |||||||||||| ||||    
T  36583471 atacatcaacttttgttgacccaaaattctcttataaatagga 36583513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1565783 - 1565746
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  1565783 atacatcaacttttgttgacccaaaattctcttataaa 1565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 9575456 - 9575419
Alignment:
Q  8 aacttttgttgacccaactttctcttataaacaggacc 45  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  9575456 aacttttgttgacccaactttctcttacaaataggacc 9575419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 40840172 - 40840127
Alignment:
Q  2 tacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||  || ||||||||||||| ||||||||    
T  40840172 tacatcaacttttgttgacaaaaatttctcttataaataggaccgg 40840127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7661152 - 7661196
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggacc 45  Q
    |||||||||||||||||||||||| | |||| |||||| ||||||    
T  7661152 atacatcaacttttgttgacccaaatgtctcatataaataggacc 7661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9027196 - 9027150
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccgg 9027150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22722007 - 22722060
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||| ||||||    
T  22722007 atacatcaacttttgttgacccaaaattctcttataaataggaccggatggagt 22722060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8817440 - 8817394
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  8817440 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 8817394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9111548 - 9111502
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9111548 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 9111502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10298055 - 10298101
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  10298055 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 10298101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17653788 - 17653834
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  17653788 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 17653834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19557106 - 19557060
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  19557106 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 19557060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33942986 - 33942944
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  33942986 atacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34080084 - 34080038
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  34080084 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 34080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37508997 - 37509043
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37508997 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 37509043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40691050 - 40691004
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  40691050 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 40691004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42507409 - 42507363
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  42507409 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 42507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48340473 - 48340519
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  48340473 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 48340519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49823435 - 49823389
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  49823435 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 49823389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42170400 - 42170347
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||||||||||||||||||  |||||||||||| |||||| | ||||||    
T  42170400 atacatcaacttttgttgacccaaaattctcttataaataggaccagatggagt 42170347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 14848311 - 14848276
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttata 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  14848311 atacatcaacttttgttgacccaattttctcttata 14848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2787886 - 2787840
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  2787886 atacatcaacttttgctgacccaaaattctcttataaataggaccgg 2787840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4238670 - 4238716
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  4238670 atacatcaacttttgttgaccaaaaattctcttataaataggaccgg 4238716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8437501 - 8437547
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||    
T  8437501 atacatcaacttttgttgactcaaaattctcttataaataggaccgg 8437547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21295380 - 21295334
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  21295380 atacatcaacttttgttgacctaaaattctcttataaataggaccgg 21295334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38964468 - 38964514
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  38964468 atacatcaacttttgttgaccaaaaattctcttataaataggaccgg 38964514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43323114 - 43323072
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  43323114 atacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44785450 - 44785404
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||    
T  44785450 atacatcaacttttgttgacccaaaattctcttataaatagaaccgg 44785404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 46208106 - 46208152
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  46208106 atacatcaacttttgttgacctaaaattctcttataaataggaccgg 46208152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51406749 - 51406795
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  51406749 atacatcaatttttgttgacccaaaattctcttataaataggaccgg 51406795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41492950 - 41492904
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  41492950 atacatcaacttttgttgacccaaatttctcttataaataggaccgg 41492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16243837 - 16243784
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||| ||||||    
T  16243837 atacatcaacttttgttgacccaaaattctcttataaataggaccggatggagt 16243784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44397623 - 44397676
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||| |||||    
T  44397623 atacatcaacttttgttgacccaaaattctcttataaataggaccggggggagt 44397676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3055634 - 3055680
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  3055634 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 3055680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6648573 - 6648527
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6648573 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 6648527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9047809 - 9047763
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9047809 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 9047763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12337991 - 12337945
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  12337991 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 12337945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13197764 - 13197718
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  13197764 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 13197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15372302 - 15372348
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15372302 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 15372348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15896918 - 15896964
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15896918 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 15896964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37990067 - 37990021
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37990067 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 37990021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38917576 - 38917530
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  38917576 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 38917530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41478693 - 41478647
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  41478693 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 41478647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44398762 - 44398808
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44398762 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 44398808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12170453 - 12170416
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  12170453 atacatcaacttttgttgacccaagtttctcttataaa 12170416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36688936 - 36688892
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggacc 45  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||    
T  36688936 atacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 16734837 - 16734802
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttata 36  Q
    ||||||||||||||||||||| ||||||||||||||    
T  16734837 atacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16734859 - 16734902
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggac 44  Q
    ||||||||||||||||| || ||||||||||||||||| |||||    
T  16734859 atacatcaacttttgtttactcaactttctcttataaataggac 16734902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13344560 - 13344606
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  13344560 atacatcaacttttgttgatccaaaattctcttataaataggaccgg 13344606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16044371 - 16044325
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  16044371 atacatcaactttagttgacccaaaattctcttataaataggaccgg 16044325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30099236 - 30099190
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||| ||||| ||||||||    
T  30099236 atacatcaacttttgttgacccaaaattctctaataaataggaccgg 30099190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31150707 - 31150665
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||    
T  31150707 atacataaacttttgttgacgcaactttctcttataaatagga 31150665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37666664 - 37666618
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  37666664 atacatcaactttagttgacccaaaattctcttataaataggaccgg 37666618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 39724289 - 39724321
Alignment:
Q  4 catcaacttttgttgacccaactttctcttata 36  Q
    ||||||||||||||||||||||| |||||||||    
T  39724289 catcaacttttgttgacccaactgtctcttata 39724321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41615730 - 41615677
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||| ||||||    
T  41615730 atacatcaacttttgttgatccaattttctcttataaataggaccggatggagt 41615677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 41594708 - 41594673
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttata 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  41594708 atacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3422136 - 3422182
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  3422136 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 3422182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5986952 - 5986998
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 5986998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6121947 - 6121901
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6121947 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 6121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17236864 - 17236910
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccgg 17236910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47833687 - 47833733
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  47833687 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 47833733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51894636 - 51894590
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  51894636 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 51894590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50430494 - 50430531
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  50430494 atacatcaacttttgttgacccaacttgctcttataaa 50430531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 40913239 - 40913187
Alignment:
Q  5 atcaacttttgttgacccaactttctcttataaacaggaccgggtggagtttt 57  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||  ||||||||    
T  40913239 atcaacttttgttgatccaaatttctcttataaataggaccggagggagtttt 40913187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3372197 - 3372243
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||    
T  3372197 atacatcaacttttgttgacccaaaattatcttataaataggaccgg 3372243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3904737 - 3904691
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  3904737 atacatcaatttttgttgacccaaaattctcttataaataggaccgg 3904691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3993052 - 3993098
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| | ||||||    
T  3993052 atacatcaacttttgttgacccaaaattctcttataaataagaccgg 3993098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4780371 - 4780417
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||| |||||||||||||| || ||||||||||||| ||||||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccgg 4780417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7579386 - 7579432
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||    
T  7579386 atacatcaacttttgttgacccaaaattctcttataaatagaaccgg 7579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20538740 - 20538694
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  20538740 atacatcaaattttgttgacccaaaattctcttataaataggaccgg 20538694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33621872 - 33621918
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||    
T  33621872 atacatcaacttttgttgacccaaaattatcttataaataggaccgg 33621918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41469820 - 41469774
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  41469820 atacatcaacttttgttgaccaaaaattctcttataaataggaccgg 41469774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42797808 - 42797854
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  42797808 atacatcaacttttgttgacctaaaattctcttataaataggaccgg 42797854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43900625 - 43900671
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||| ||||||  |||||||||||| ||||||||    
T  43900625 atacatcaacttttgttaacccaaaattctcttataaataggaccgg 43900671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 46797805 - 46797847
Alignment:
Q  5 atcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||  |||||||||||| ||||||||    
T  46797805 atcaacttttgttgacccaaaattctcttataaataggaccgg 46797847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47838671 - 47838625
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  47838671 atacatcaacttttgttgaccaaaaattctcttataaataggaccgg 47838625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48336339 - 48336385
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||    
T  48336339 atacatcaacttttgttgacccaaaattttcttataaataggaccgg 48336385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 53337446 - 53337492
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||| |||||||||  |||||||||||| ||||||||    
T  53337446 atacatcaacttttattgacccaaaattctcttataaataggaccgg 53337492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17344289 - 17344326
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  17344289 atacatcaacttttgttgatccaaatttctcttataaa 17344326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 19405448 - 19405411
Alignment:
Q  235 attgatatgaattgttgtgcatatctatttttgacatg 272  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  19405448 attgatatgaattgttgtgcatatccattttggacatg 19405411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52756751 - 52756796
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccg 46  Q
    ||||||||||||||||||||||||  |||| ||||||| |||||||    
T  52756751 atacatcaacttttgttgacccaaaattcttttataaataggaccg 52756796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25855137 - 25855093
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggacc 45  Q
    |||||| ||||||||||||| ||||||||||| ||||| ||||||    
T  25855137 atacattaacttttgttgactcaactttctctcataaataggacc 25855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14236699 - 14236738
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaaca 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  14236699 atacatcaacttttgttgactcaactttctcttataaaca 14236738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2830411 - 2830457
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  2830411 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 2830457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6330191 - 6330237
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6330191 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 6330237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8099606 - 8099652
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  8099606 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 8099652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8383023 - 8382977
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  8383023 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 8382977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9644772 - 9644818
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9644772 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 9644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9650789 - 9650835
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9650789 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 9650835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11572199 - 11572153
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  11572199 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 11572153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13853647 - 13853601
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  13853647 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 13853601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26602399 - 26602445
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  26602399 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 26602445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8186443 - 8186496
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    ||||||||||||||||||| |||| ||||| ||||||| ||||||||| |||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggaccggggggagt 8186496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8417847 - 8417802
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccg 46  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||    
T  8417847 atacatcaacttttgttgacccaaaattctcttataaataggaccg 8417802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33052848 - 33052795
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 54  Q
    |||||||||||||| |||||||||  |||||||||||| |||||||| ||||||    
T  33052848 atacatcaacttttattgacccaaaattctcttataaataggaccggatggagt 33052795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28747188 - 28747145
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggac 44  Q
    ||||||||||||||||||||||||  |||||||||||| |||||    
T  28747188 atacatcaacttttgttgacccaaaattctcttataaataggac 28747145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6068642 - 6068688
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||    
T  6068642 atacatcaacttttgttgactcaaaattctcttataaataggaccgg 6068688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35031055 - 35031009
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  35031055 atacatcaatttttgttgacccaaaattctcttataaataggaccgg 35031009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7597053 - 7597090
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||| || |||||||||||||||||    
T  7597053 atacatcaacttttgttaacacaactttctcttataaa 7597090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14936533 - 14936577
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggacc 45  Q
    ||||||||||| |||||||||||| | ||||||||||| ||||||    
T  14936533 atacatcaactattgttgacccaaatatctcttataaataggacc 14936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 49581 - 49627
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 49627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000003; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6126900 - 6126946
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6126900 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 6126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9395426 - 9395472
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9395426 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 9395472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13103100 - 13103146
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  13103100 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 13103146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17025700 - 17025746
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  17025700 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 17025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23360018 - 23360064
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  23360018 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 23360064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36563592 - 36563546
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  36563592 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 36563546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41989461 - 41989415
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  41989461 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 41989415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11795244 - 11795287
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggac 44  Q
    ||||||||||||||||||||||||  |||||||||||| |||||    
T  11795244 atacatcaacttttgttgacccaaaattctcttataaataggac 11795287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36595828 - 36595781
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccggg 48  Q
    ||||||||| ||||||||||| |||||||||||||||| | |||||||    
T  36595828 atacatcaatttttgttgacctaactttctcttataaataagaccggg 36595781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 9152157 - 9152187
Alignment:
Q  7 caacttttgttgacccaactttctcttataa 37  Q
    |||||||||||||||||||||||||||||||    
T  9152157 caacttttgttgacccaactttctcttataa 9152187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13033127 - 13033169
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    ||||||||||||||||||||||||  |||||||||||| ||||    
T  13033127 atacatcaacttttgttgacccaaaattctcttataaatagga 13033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21576022 - 21576068
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  21576022 atacatcaacttttgttgatccaaaattctcttataaataggaccgg 21576068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37149009 - 37148963
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  |||| ||||||| ||||||||    
T  37149009 atacatcaacttttgttgacccaaaattctattataaataggaccgg 37148963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37642030 - 37642076
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    |||||||||||||| |||||||||  |||||||||||| ||||||||    
T  37642030 atacatcaacttttattgacccaaaattctcttataaataggaccgg 37642076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 14817847 - 14817810
Alignment:
Q  250 tgtgcatatctatttttgacatgaatctcgatgcattt 287  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  14817847 tgtgcatatctattttagacatgaatctcgattcattt 14817810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 35584450 - 35584486
Alignment:
Q  2 tacatcaacttttgttgacccaactttctcttataaa 38  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  35584450 tacatcaacttttgttgactcaattttctcttataaa 35584486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1411 - 1453
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacagga 43  Q
    ||||||||||||||||||||||||  |||||||||||| ||||    
T  1411 atacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12936 - 12982
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  12936 atacatcaacttttgctgacccaaaattctcttataaataggaccgg 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6185 - 6139
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||    
T  6185 atacatcaacttttgttgacccaaaattttcttataaataggaccgg 6139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23861 - 23907
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 47  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||    
T  23861 atacatcaacttttgttgacccaaaattttcttataaataggaccgg 23907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39 - 2
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataaa 38  Q
    |||||||||||||||||||| | |||||||||||||||    
T  39 atacatcaacttttgttgactcgactttctcttataaa 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 231379 - 231415
Alignment:
Q  1 atacatcaacttttgttgacccaactttctcttataa 37  Q
    |||||| |||||||||||| |||||||||||||||||    
T  231379 atacataaacttttgttgatccaactttctcttataa 231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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